AlfalfaGEDB | MsaG007499

M. sativa ssp. caerulea / MsaG007499

KEGG: -
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007499	XP_013463080.1	98.974	390	3	1	1	390	95	483	0.0	790

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007499	sp\|Q9SA80\|WRK14_ARATH	44.581	406	179	11	1	390	55	430	2.28e-84	266

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007499	tr\|A0A072V519\|A0A072V519_MEDTR	98.974	390	3	1	1	390	95	483	0.0	790

TFs/TRs:

Gene ID	Type	Classification
MsaG007499	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000309	MsaG007499	0.845442	7.601217e-59	3.534191e-56
MsaG000547	MsaG007499	0.800437	2.411007e-48	3.292214e-46
MsaG000760	MsaG007499	0.826014	6.087353e-54	1.574851e-51
MsaG001010	MsaG007499	0.811351	1.253848e-50	2.213057e-48
MsaG001011	MsaG007499	0.814616	2.431835e-51	4.655537e-49
MsaG001013	MsaG007499	0.841852	6.864094e-58	2.841070e-55
MsaG004097	MsaG007499	0.824174	1.647670e-53	4.052264e-51
MsaG004830	MsaG007499	0.823827	1.985755e-53	4.838108e-51
MsaG005007	MsaG007499	0.819542	1.923140e-52	4.178642e-50
MsaG005405	MsaG007499	0.826603	4.414483e-54	1.160887e-51
MsaG005504	MsaG007499	0.806111	1.632778e-49	2.540526e-47
MsaG005957	MsaG007499	0.829532	8.767053e-55	2.503477e-52
MsaG006304	MsaG007499	0.848200	1.349994e-59	6.882399e-57
MsaG007109	MsaG007499	0.805776	1.919152e-49	2.962563e-47
MsaG007296	MsaG007499	0.826554	4.532774e-54	1.190382e-51
MsaG007274	MsaG007499	0.820982	9.027487e-53	2.037842e-50
MsaG007526	MsaG007499	0.831919	2.294878e-55	7.020287e-53
MsaG007499	MsaG007767	0.834840	4.325151e-56	1.441847e-53
MsaG007499	MsaG007798	0.869457	6.194445e-66	7.016622e-63
MsaG007499	MsaG010593	0.812767	6.179347e-51	1.129447e-48
MsaG007499	MsaG010697	0.812919	5.725386e-51	1.050471e-48
MsaG007499	MsaG011094	0.805383	2.318485e-49	3.546302e-47
MsaG007499	MsaG011443	0.801494	1.470141e-48	2.055918e-46
MsaG007499	MsaG012226	0.804680	3.247383e-49	4.886734e-47
MsaG007499	MsaG015020	0.816650	8.611273e-52	1.735862e-49
MsaG007499	MsaG016078	0.817882	4.560773e-52	9.490589e-50
MsaG007499	MsaG016352	0.850408	3.298211e-60	1.812630e-57
MsaG007499	MsaG017762	0.817908	4.500860e-52	9.371925e-50
MsaG007499	MsaG019542	0.827533	2.650174e-54	7.152941e-52
MsaG007499	MsaG022494	0.829365	9.620042e-55	2.733831e-52
MsaG007499	MsaG022595	0.825311	8.917278e-54	2.262402e-51
MsaG007499	MsaG022597	0.824202	1.623056e-53	3.994814e-51
MsaG007499	MsaG022970	0.803058	7.027044e-49	1.018490e-46
MsaG007499	MsaG023205	0.824602	1.308786e-53	3.256592e-51
MsaG007499	MsaG027027	0.827380	2.882705e-54	7.747276e-52
MsaG007499	MsaG028091	0.836388	1.762089e-56	6.153688e-54
MsaG007499	MsaG028633	0.820413	1.218371e-52	2.709146e-50
MsaG007499	MsaG028713	0.809970	2.485669e-50	4.241681e-48
MsaG007499	MsaG029480	0.830171	6.137545e-55	1.784928e-52
MsaG007499	MsaG029773	0.821670	6.276654e-53	1.442878e-50
MsaG007499	MsaG030333	0.809356	3.362242e-50	5.652972e-48
MsaG007499	MsaG030334	0.823501	2.365094e-53	5.711519e-51
MsaG007499	MsaG030986	0.824170	1.651439e-53	4.061083e-51
MsaG007499	MsaG032101	0.809747	2.774398e-50	4.709025e-48
MsaG007499	MsaG033400	0.839147	3.473941e-57	1.320368e-54
MsaG007499	MsaG033568	0.813950	3.406506e-51	6.413724e-49
MsaG007499	MsaG033596	0.856481	6.066430e-62	4.136333e-59
MsaG007499	MsaG034398	0.826020	6.066912e-54	1.569844e-51
MsaG007499	MsaG034605	0.807945	6.710111e-50	1.090554e-47
MsaG007499	MsaG037009	0.800085	2.841366e-48	3.849065e-46
MsaG007499	MsaG038015	0.809537	3.076953e-50	5.196244e-48
MsaG007499	MsaG040582	0.853538	4.303227e-61	2.638709e-58
MsaG007499	MsaG040585	0.857622	2.805890e-62	1.994847e-59
MsaG007499	MsaG041738	0.812855	5.914656e-51	1.083419e-48
MsaG007499	MsaG041743	0.832782	1.406061e-55	4.410378e-53
MsaG007499	MsaG041774	0.814451	2.644581e-51	5.041963e-49
MsaG007499	MsaG041817	0.816540	9.111033e-52	1.831472e-49
MsaG007499	MsaG041820	0.814436	2.663813e-51	5.076891e-49
MsaG007499	MsaG042122	0.832516	1.636146e-55	5.092363e-53
MsaG007499	MsaG042124	0.812548	6.898995e-51	1.254172e-48
MsaG007499	MsaG042546	0.821691	6.205248e-53	1.427290e-50
MsaG007499	MsaG043976	0.800899	1.942584e-48	2.680297e-46
MsaG007499	MsaG044233	0.810947	1.532593e-50	2.678376e-48
MsaG007499	MsaG044382	0.822055	5.117303e-53	1.188483e-50
MsaG007499	MsaG044390	0.840114	1.952847e-57	7.650699e-55
MsaG007499	MsaG044391	0.835937	2.290967e-56	7.892435e-54
MsaG007499	MsaG045345	0.823339	2.580477e-53	6.204554e-51
MsaG007499	MsaG047152	0.822831	3.384461e-53	8.026552e-51
MsaG007499	MsaG003672	0.810727	1.709041e-50	2.970739e-48
MsaG007499	MsaG007338	0.800028	2.917417e-48	3.947108e-46
MsaG007499	MsaG007923	0.851696	1.434765e-60	8.245476e-58
MsaG007499	MsaG011182	0.817017	7.130443e-52	1.451106e-49
MsaG007499	MsaG009207	0.842395	4.938899e-58	2.080033e-55
MsaG007499	MsaG016790	0.833762	8.038746e-56	2.595089e-53
MsaG007499	MsaG013115	0.825157	9.693766e-54	2.448987e-51
MsaG007499	MsaG013595	0.826522	4.612152e-54	1.210182e-51
MsaG007499	MsaG013237	0.814160	3.063835e-51	5.798719e-49
MsaG007499	MsaG028052	0.800446	2.400963e-48	3.279179e-46
MsaG007499	MsaG034313	0.800554	2.282584e-48	3.125105e-46
MsaG007499	MsaG033548	0.817981	4.334636e-52	9.043029e-50
MsaG007499	MsaG031718	0.813994	3.332319e-51	6.280755e-49
MsaG007499	MsaG038287	0.809736	2.789346e-50	4.733156e-48
MsaG007499	MsaG037254	0.836435	1.714130e-56	5.994719e-54
MsaG007499	MsaG043823	0.817025	7.099193e-52	1.445072e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007499	MtrunA17_Chr2g0293481	98.974	390	3	1	1	390	95	483	0.0	790
MsaG007499	MtrunA17_Chr7g0248691	49.223	193	69	5	145	336	135	299	6.03e-49	168
MsaG007499	MtrunA17_Chr8g0348311	41.892	222	98	4	145	366	136	326	3.20e-45	159
MsaG007499	MtrunA17_Chr7g0270051	44.843	223	86	10	145	336	25	241	4.57e-40	143
MsaG007499	MtrunA17_Chr8g0379461	65.625	96	31	1	145	238	45	140	2.05e-38	138
MsaG007499	MtrunA17_Chr1g0202461	61.165	103	31	1	145	247	241	334	5.33e-38	140
MsaG007499	MtrunA17_Chr2g0319961	67.033	91	29	1	145	234	50	140	5.07e-36	132
MsaG007499	MtrunA17_Chr8g0387501	68.235	85	23	1	174	258	129	209	1.50e-35	131
MsaG007499	MtrunA17_Chr2g0284321	52.344	128	51	2	146	273	11	128	2.57e-33	124
MsaG007499	MtrunA17_Chr4g0071521	59.770	87	30	1	145	231	221	302	4.57e-30	117
MsaG007499	MtrunA17_Chr1g0147881	57.955	88	32	2	144	231	237	319	9.00e-30	117
MsaG007499	MtrunA17_Chr5g0401821	56.842	95	36	2	137	231	167	256	1.26e-28	112
MsaG007499	MtrunA17_Chr4g0053281	57.471	87	32	2	145	231	242	323	8.70e-27	109
MsaG007499	MtrunA17_Chr1g0184691	53.846	91	36	3	147	236	271	356	1.59e-25	106
MsaG007499	MtrunA17_Chr7g0228941	63.333	60	22	0	172	231	50	109	3.36e-25	99.4
MsaG007499	MtrunA17_Chr3g0139021	48.454	97	45	2	135	231	280	371	5.39e-25	105
MsaG007499	MtrunA17_Chr2g0289181	53.333	75	34	1	172	245	12	86	8.78e-24	98.6
MsaG007499	MtrunA17_Chr1g0194481	52.632	76	34	2	175	249	159	233	1.28e-20	91.7
MsaG007499	MtrunA17_Chr7g0218081	51.316	76	36	1	175	250	411	485	1.58e-19	90.1
MsaG007499	MtrunA17_Chr7g0218081	47.692	65	30	3	175	237	229	291	4.25e-11	64.3
MsaG007499	MtrunA17_Chr7g0270831	52.113	71	34	0	174	244	216	286	2.79e-19	89.0
MsaG007499	MtrunA17_Chr3g0099641	41.584	101	58	1	149	249	227	326	3.74e-19	89.0
MsaG007499	MtrunA17_Chr4g0051881	57.377	61	25	1	175	235	179	238	5.23e-19	87.4
MsaG007499	MtrunA17_Chr4g0001361	49.367	79	39	1	168	246	157	234	2.05e-18	85.1
MsaG007499	MtrunA17_Chr4g0042831	42.718	103	48	3	143	237	241	340	2.91e-18	85.9
MsaG007499	MtrunA17_Chr2g0288871	57.377	61	26	0	174	234	305	365	4.55e-18	85.9
MsaG007499	MtrunA17_Chr4g0025061	30.058	173	96	4	73	244	282	430	5.71e-18	85.9
MsaG007499	MtrunA17_Chr5g0418191	47.561	82	39	2	175	253	321	401	1.12e-17	84.3
MsaG007499	MtrunA17_Chr5g0418191	48.333	60	29	2	175	234	152	209	2.92e-11	64.7
MsaG007499	MtrunA17_Chr5g0443131	55.738	61	26	1	175	235	158	217	1.96e-17	82.4
MsaG007499	MtrunA17_Chr7g0270191	39.130	138	72	5	135	265	109	241	3.36e-17	81.3
MsaG007499	MtrunA17_Chr4g0025051	45.333	75	41	0	170	244	331	405	4.97e-17	82.8
MsaG007499	MtrunA17_Chr2g0333851	43.038	79	45	0	171	249	166	244	5.12e-17	81.3
MsaG007499	MtrunA17_Chr7g0216891	48.571	70	36	0	175	244	220	289	5.99e-17	82.8
MsaG007499	MtrunA17_Chr4g0051181	54.098	61	28	0	175	235	244	304	6.07e-17	82.4
MsaG007499	MtrunA17_Chr4g0075201	53.333	60	28	0	175	234	268	327	9.95e-17	81.6
MsaG007499	MtrunA17_Chr7g0238921	43.299	97	48	2	135	231	91	180	1.14e-16	80.1
MsaG007499	MtrunA17_Chr7g0263531	45.833	96	45	3	145	234	326	420	1.32e-16	81.3
MsaG007499	MtrunA17_Chr7g0263531	47.143	70	35	2	175	244	190	257	9.50e-13	69.3
MsaG007499	MtrunA17_Chr7g0249311	40.000	100	53	2	145	238	357	455	2.82e-16	80.9
MsaG007499	MtrunA17_Chr7g0249311	47.143	70	35	2	165	234	170	237	2.30e-12	68.6
MsaG007499	MtrunA17_Chr3g0101131	42.045	88	41	2	175	253	416	502	3.65e-16	80.1
MsaG007499	MtrunA17_Chr2g0302391	39.394	99	59	1	148	246	186	283	5.15e-16	79.3
MsaG007499	MtrunA17_Chr5g0418781	54.386	57	25	1	175	231	125	180	6.35e-16	77.4
MsaG007499	MtrunA17_Chr5g0445311	45.333	75	37	2	175	246	365	438	1.01e-15	79.0
MsaG007499	MtrunA17_Chr5g0445311	45.205	73	37	3	175	246	201	271	8.55e-11	63.5
MsaG007499	MtrunA17_Chr2g0322391	45.833	72	39	0	175	246	350	421	1.01e-15	79.0
MsaG007499	MtrunA17_Chr3g0136961	42.529	87	38	1	175	261	139	213	1.05e-15	77.0
MsaG007499	MtrunA17_Chr2g0294231	51.667	60	28	1	175	234	204	262	1.26e-15	77.8
MsaG007499	MtrunA17_Chr8g0347251	31.250	224	111	10	86	299	54	244	1.33e-15	77.4
MsaG007499	MtrunA17_Chr8g0383251	40.217	92	47	3	143	234	84	167	2.45e-15	73.9
MsaG007499	MtrunA17_Chr3g0129321	35.537	121	74	3	117	235	60	178	2.48e-15	74.3
MsaG007499	MtrunA17_Chr3g0126391	42.342	111	56	4	175	282	134	239	5.21e-15	75.5
MsaG007499	MtrunA17_Chr4g0060271	51.667	60	29	0	175	234	256	315	6.28e-15	76.6
MsaG007499	MtrunA17_Chr1g0150281	42.857	77	39	1	155	231	126	197	9.14e-15	74.3
MsaG007499	MtrunA17_Chr7g0249301	48.485	66	33	1	172	237	290	354	1.17e-14	74.7
MsaG007499	MtrunA17_Chr7g0249301	50.000	70	33	2	165	234	53	120	1.93e-13	71.2
MsaG007499	MtrunA17_Chr4g0068541	42.667	75	42	1	175	249	209	282	1.20e-14	75.1
MsaG007499	MtrunA17_Chr3g0079691	46.575	73	37	2	168	239	488	559	1.40e-14	75.5
MsaG007499	MtrunA17_Chr3g0079691	42.857	91	46	4	175	264	281	366	1.18e-12	69.7
MsaG007499	MtrunA17_Chr4g0004911	46.479	71	36	2	168	237	329	398	2.06e-14	74.7
MsaG007499	MtrunA17_Chr4g0004911	49.254	67	31	2	175	239	185	250	1.13e-12	69.3
MsaG007499	MtrunA17_Chr7g0275531	39.796	98	45	3	175	266	119	208	3.12e-14	73.2
MsaG007499	MtrunA17_Chr6g0485431	50.820	61	28	2	175	234	155	214	3.60e-14	73.2
MsaG007499	MtrunA17_Chr7g0224801	45.902	61	32	1	172	232	91	150	3.61e-14	70.1
MsaG007499	MtrunA17_Chr8g0335811	33.065	124	73	3	108	231	97	210	3.74e-14	71.2
MsaG007499	MtrunA17_Chr4g0024391	41.333	75	44	0	170	244	225	299	3.80e-14	73.9
MsaG007499	MtrunA17_Chr4g0074001	45.333	75	37	3	168	239	352	425	3.85e-14	73.9
MsaG007499	MtrunA17_Chr5g0432161	37.864	103	55	2	145	239	384	485	8.04e-14	73.2
MsaG007499	MtrunA17_Chr1g0150801	34.862	109	66	3	124	232	56	159	1.19e-13	68.6
MsaG007499	MtrunA17_Chr5g0447701	48.485	66	33	1	175	240	253	317	1.34e-13	71.6
MsaG007499	MtrunA17_Chr7g0243891	42.667	75	41	2	168	241	367	440	2.73e-13	71.2
MsaG007499	MtrunA17_Chr7g0243891	38.281	128	63	6	175	292	217	338	4.93e-11	64.3
MsaG007499	MtrunA17_Chr1g0150271	42.424	66	38	0	171	236	98	163	3.50e-13	68.9
MsaG007499	MtrunA17_Chr3g0106491	46.154	65	34	1	175	239	366	429	3.92e-13	70.9
MsaG007499	MtrunA17_Chr8g0383351	46.667	60	31	1	172	231	158	216	5.26e-13	68.2
MsaG007499	MtrunA17_Chr3g0129361	46.667	60	31	1	172	231	142	200	9.94e-13	67.0
MsaG007499	MtrunA17_Chr1g0189391	37.234	94	51	3	145	231	62	154	1.82e-12	67.8
MsaG007499	MtrunA17_Chr7g0248721	41.573	89	47	5	145	232	113	197	2.40e-12	65.9
MsaG007499	MtrunA17_Chr1g0188941	45.312	64	34	1	172	235	49	111	2.50e-12	63.2
MsaG007499	MtrunA17_Chr8g0387981	50.877	57	26	1	175	229	133	189	9.47e-12	65.9
MsaG007499	MtrunA17_Chr7g0244981	37.963	108	53	3	124	229	84	179	2.04e-11	64.3
MsaG007499	MtrunA17_Chr5g0428351	31.792	173	92	6	136	300	153	307	4.44e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007499	AT1G30650.1	44.581	406	179	11	1	390	55	430	2.32e-85	266
MsaG007499	AT2G34830.1	45.170	383	137	15	2	351	59	401	6.45e-79	249
MsaG007499	AT2G34830.2	45.170	383	137	15	2	351	68	410	7.20e-79	249
MsaG007499	AT4G01250.1	48.603	179	61	4	145	315	109	264	5.39e-46	160
MsaG007499	AT5G52830.1	52.667	150	37	3	145	294	145	260	2.49e-41	149
MsaG007499	AT1G29280.1	60.526	114	39	2	133	245	32	140	1.01e-40	145
MsaG007499	AT5G45050.1	40.927	259	108	9	123	364	1141	1371	1.42e-40	154
MsaG007499	AT5G45050.2	40.154	259	110	8	123	364	1113	1343	1.58e-40	154
MsaG007499	AT5G45050.4	40.927	259	108	9	123	364	1002	1232	1.88e-40	153
MsaG007499	AT3G58710.2	68.478	92	28	1	145	235	40	131	1.02e-38	140
MsaG007499	AT3G58710.1	66.327	98	32	1	139	235	35	132	1.62e-38	139
MsaG007499	AT4G23550.1	42.328	189	92	3	149	336	124	296	4.98e-35	131
MsaG007499	AT2G30590.1	54.455	101	40	3	137	236	281	376	1.34e-29	118
MsaG007499	AT5G45260.1	57.009	107	33	2	145	249	1190	1285	1.51e-29	121
MsaG007499	AT2G23320.1	46.957	115	56	1	117	231	188	297	3.11e-28	113
MsaG007499	AT4G31550.2	55.172	87	34	1	145	231	221	302	1.02e-27	112
MsaG007499	AT4G24240.1	53.191	94	39	1	138	231	250	338	1.61e-27	112
MsaG007499	AT4G31550.1	55.172	87	34	1	145	231	222	303	3.52e-27	110
MsaG007499	AT2G24570.1	54.023	87	35	1	145	231	219	300	6.41e-26	107
MsaG007499	AT5G28650.1	50.526	95	42	2	137	231	230	319	3.04e-24	102
MsaG007499	AT3G04670.1	52.874	87	36	2	145	231	238	319	4.99e-24	102
MsaG007499	AT5G46350.1	54.054	74	31	2	175	246	184	256	2.20e-20	91.7
MsaG007499	AT1G29860.1	53.623	69	30	2	175	242	137	204	8.38e-19	86.3
MsaG007499	AT4G18170.1	57.377	61	25	1	175	235	173	232	1.21e-18	86.3
MsaG007499	AT1G13960.2	45.000	100	42	4	145	234	219	315	1.33e-18	86.7
MsaG007499	AT1G13960.2	50.000	60	28	2	175	234	77	134	1.58e-11	65.5
MsaG007499	AT1G68150.1	48.649	74	38	0	175	248	236	309	1.58e-18	86.7
MsaG007499	AT1G13960.1	45.000	100	42	4	145	234	372	468	1.71e-18	87.4
MsaG007499	AT1G13960.1	50.000	60	28	2	175	234	230	287	1.92e-11	65.9
MsaG007499	AT4G04450.2	48.684	76	39	0	174	249	198	273	6.01e-18	85.5
MsaG007499	AT5G49520.1	55.000	60	26	1	175	234	222	280	6.30e-18	85.1
MsaG007499	AT4G04450.1	48.684	76	39	0	174	249	292	367	7.09e-18	85.9
MsaG007499	AT1G62300.1	55.738	61	27	0	174	234	312	372	7.26e-18	85.9
MsaG007499	AT2G04880.2	54.545	66	29	1	172	237	281	345	7.84e-18	85.5
MsaG007499	AT2G04880.2	44.000	75	35	3	170	244	107	174	5.50e-11	64.3
MsaG007499	AT2G03340.1	47.778	90	42	3	175	263	416	501	8.14e-18	85.5
MsaG007499	AT2G03340.1	41.304	92	52	2	175	266	251	340	2.69e-13	71.6
MsaG007499	AT2G04880.1	54.545	66	29	1	172	237	305	369	8.44e-18	85.5
MsaG007499	AT2G04880.1	44.000	75	35	3	170	244	107	174	5.31e-11	64.7
MsaG007499	AT4G22070.4	55.738	61	27	0	174	234	297	357	1.05e-17	85.1
MsaG007499	AT4G22070.3	55.738	61	27	0	174	234	297	357	1.05e-17	85.1
MsaG007499	AT4G22070.2	55.738	61	27	0	174	234	297	357	1.05e-17	85.1
MsaG007499	AT4G22070.1	55.738	61	27	0	174	234	297	357	1.05e-17	85.1
MsaG007499	AT1G80840.1	48.485	66	34	0	171	236	143	208	3.42e-17	82.0
MsaG007499	AT3G62340.1	53.333	60	27	1	175	234	119	177	1.67e-16	79.3
MsaG007499	AT4G01720.1	39.000	100	60	1	135	234	201	299	1.78e-16	81.3
MsaG007499	AT5G15130.1	47.143	70	37	0	175	244	228	297	5.73e-16	80.1
MsaG007499	AT5G15130.2	47.143	70	37	0	175	244	186	255	6.39e-16	79.7
MsaG007499	AT5G26170.1	47.887	71	35	2	161	231	101	169	7.17e-16	75.5
MsaG007499	AT2G21900.1	37.363	91	53	2	145	235	83	169	8.07e-16	75.9
MsaG007499	AT1G18860.1	53.333	60	28	0	175	234	240	299	9.60e-16	79.3
MsaG007499	AT4G31800.2	47.945	73	35	1	175	247	112	181	1.74e-15	75.9
MsaG007499	AT1G69310.4	52.632	57	26	1	175	231	148	203	1.84e-15	76.6
MsaG007499	AT1G69310.2	52.632	57	26	1	175	231	148	203	1.84e-15	76.6
MsaG007499	AT1G69310.1	52.632	57	26	1	175	231	148	203	1.84e-15	76.6
MsaG007499	AT2G25000.2	51.667	60	29	0	175	234	104	163	2.65e-15	75.1
MsaG007499	AT2G25000.4	51.667	60	29	0	175	234	104	163	2.65e-15	75.1
MsaG007499	AT4G31800.1	47.945	73	35	1	175	247	177	246	2.98e-15	76.3
MsaG007499	AT2G25000.3	51.667	60	29	0	175	234	126	185	4.01e-15	75.1
MsaG007499	AT5G07100.2	46.053	76	36	2	175	246	142	216	4.79e-15	73.9
MsaG007499	AT5G07100.4	46.053	76	36	2	175	246	142	216	4.79e-15	73.9
MsaG007499	AT5G07100.5	46.053	76	36	2	175	246	142	216	4.79e-15	73.9
MsaG007499	AT5G07100.3	46.053	76	36	2	175	246	142	216	4.79e-15	73.9
MsaG007499	AT5G41570.1	40.000	90	48	2	143	232	72	155	4.87e-15	73.2
MsaG007499	AT2G47260.1	51.667	60	28	1	175	234	175	233	7.03e-15	75.5
MsaG007499	AT2G25000.1	51.667	60	29	0	175	234	147	206	7.21e-15	74.7
MsaG007499	AT1G64000.1	50.820	61	29	1	172	232	112	171	7.70e-15	73.2
MsaG007499	AT5G07100.1	46.053	76	36	2	175	246	235	309	7.85e-15	75.1
MsaG007499	AT4G26640.5	46.154	65	34	1	175	239	206	269	1.13e-14	75.5
MsaG007499	AT4G26640.6	46.154	65	34	1	175	239	206	269	1.13e-14	75.5
MsaG007499	AT4G26640.4	46.154	65	34	1	175	239	206	269	1.13e-14	75.5
MsaG007499	AT4G26640.3	46.154	65	34	1	175	239	206	269	1.13e-14	75.5
MsaG007499	AT1G69810.1	36.364	110	56	3	136	244	178	274	1.21e-14	75.1
MsaG007499	AT4G26640.2	46.154	65	34	1	175	239	382	445	1.24e-14	75.9
MsaG007499	AT4G30935.1	45.714	70	35	2	172	239	329	397	1.26e-14	75.5
MsaG007499	AT4G26640.1	46.154	65	34	1	175	239	310	373	1.30e-14	75.5
MsaG007499	AT4G26640.7	46.154	65	34	1	175	239	342	405	1.32e-14	75.9
MsaG007499	AT3G01080.2	38.710	124	65	4	175	296	345	459	1.85e-14	75.1
MsaG007499	AT3G01080.2	47.059	68	34	2	175	242	206	271	1.35e-12	69.3
MsaG007499	AT3G01080.1	38.710	124	65	4	175	296	307	421	2.51e-14	74.7
MsaG007499	AT3G01080.1	47.059	68	34	2	175	242	168	233	1.42e-12	69.3
MsaG007499	AT2G37260.2	54.386	57	25	1	175	231	268	323	2.65e-14	73.9
MsaG007499	AT2G37260.2	28.426	197	119	5	168	345	77	270	3.13e-11	64.7
MsaG007499	AT2G37260.1	54.386	57	25	1	175	231	350	405	2.66e-14	74.3
MsaG007499	AT2G37260.1	28.426	197	119	5	168	345	159	352	2.87e-11	65.1
MsaG007499	AT2G37260.3	54.386	57	25	1	175	231	270	325	2.69e-14	73.9
MsaG007499	AT2G37260.3	28.426	197	119	5	168	345	79	272	3.20e-11	64.7
MsaG007499	AT1G69810.2	38.462	104	50	3	142	244	126	216	2.78e-14	73.6
MsaG007499	AT5G56270.1	49.206	63	31	1	175	237	488	549	2.97e-14	75.1
MsaG007499	AT5G56270.1	47.059	68	32	3	175	240	274	339	6.96e-12	67.4
MsaG007499	AT2G38470.1	44.444	72	39	1	175	246	363	433	3.53e-14	74.3
MsaG007499	AT5G13080.1	45.902	61	32	1	172	232	65	124	7.04e-14	68.9
MsaG007499	AT4G26440.1	38.947	95	54	2	172	263	370	463	1.57e-13	72.4
MsaG007499	AT4G26440.1	46.667	75	36	3	175	247	179	251	4.25e-13	71.2
MsaG007499	AT4G39410.1	36.458	96	53	2	136	231	192	279	1.86e-13	70.9
MsaG007499	AT2G40750.1	33.099	142	84	4	145	280	122	258	2.22e-13	71.2
MsaG007499	AT2G30250.1	50.820	61	29	1	175	235	329	388	2.59e-13	71.2
MsaG007499	AT2G44745.1	38.462	91	55	1	141	231	112	201	3.50e-13	68.9
MsaG007499	AT1G55600.1	46.774	62	32	1	173	234	306	366	4.86e-13	70.9
MsaG007499	AT2G40740.1	40.909	88	45	3	145	229	147	230	4.99e-13	69.7
MsaG007499	AT2G40740.3	40.909	88	45	3	145	229	156	239	5.96e-13	69.3
MsaG007499	AT3G01970.1	45.000	60	32	1	172	231	63	121	6.17e-13	66.2
MsaG007499	AT2G46130.1	45.902	61	32	1	172	232	28	87	6.31e-13	65.1
MsaG007499	AT5G43290.1	36.364	143	84	5	175	315	115	252	7.11e-13	68.9
MsaG007499	AT3G01080.3	47.059	68	34	2	175	242	206	271	1.00e-12	68.9
MsaG007499	AT5G24110.1	46.575	73	32	2	159	229	103	170	1.36e-12	68.6
MsaG007499	AT1G66550.2	33.684	95	61	1	137	229	66	160	2.49e-12	67.0
MsaG007499	AT4G11070.1	49.123	57	27	1	175	229	142	198	3.12e-12	67.4
MsaG007499	AT4G11070.2	49.123	57	27	1	175	229	110	166	3.26e-12	67.0
MsaG007499	AT3G56400.1	43.333	60	32	1	172	229	118	177	3.82e-12	67.0
MsaG007499	AT2G46400.1	39.583	96	46	4	139	229	73	161	4.00e-12	67.0
MsaG007499	AT5G64810.1	46.667	60	31	1	172	231	108	166	6.92e-12	64.7
MsaG007499	AT1G66560.1	49.153	59	28	1	173	229	102	160	1.46e-11	64.7
MsaG007499	AT4G23810.1	49.123	57	27	1	175	229	159	215	1.61e-11	65.5
MsaG007499	AT1G66550.1	34.000	100	59	3	137	229	66	165	2.29e-11	63.9
MsaG007499	AT1G80590.1	32.540	126	78	2	175	298	86	206	4.36e-11	62.8
MsaG007499	AT4G12020.3	33.858	127	66	4	175	285	469	593	6.48e-11	65.1
MsaG007499	AT4G12020.6	33.858	127	66	4	175	285	469	593	6.72e-11	64.7
MsaG007499	AT4G12020.8	33.858	127	66	4	175	285	469	593	6.72e-11	64.7
MsaG007499	AT4G12020.10	33.858	127	66	4	175	285	469	593	6.83e-11	64.7
MsaG007499	AT1G69310.3	47.368	57	25	2	175	231	148	199	7.42e-11	62.8
MsaG007499	AT4G12020.7	33.858	127	66	4	175	285	469	593	7.82e-11	64.7
MsaG007499	AT4G12020.1	33.858	127	66	4	175	285	469	593	7.89e-11	64.7
MsaG007499	AT4G12020.9	33.858	127	66	4	175	285	469	593	7.89e-11	64.7
MsaG007499	AT4G12020.5	33.858	127	66	4	175	285	402	526	7.97e-11	64.7
MsaG007499	AT4G12020.2	33.858	127	66	4	175	285	469	593	8.53e-11	64.7
MsaG007499	AT4G12020.4	33.858	127	66	4	175	285	469	593	8.83e-11	64.3
MsaG007499	AT4G12020.11	33.858	127	66	4	175	285	469	593	9.40e-11	64.3

Find 67 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTGAAGAAGATTCATAATT+AGG	0.177473	2:+18836140	None:intergenic
TGATTAAACAATAGGTTTAA+TGG	0.202593	2:+18833987	None:intergenic
ATAATTGATGTTGCTTCTTC+TGG	0.224592	2:-18836293	MsaT007499.1:CDS
ATAACAGCAGAAGGTTTAAT+TGG	0.226101	2:+18836095	None:intergenic
TTGTTCTCTTGTTCTTCTTT+TGG	0.236616	2:+18834197	None:intergenic
CATCATAGCCTTCTCTTGTT+TGG	0.267430	2:+18833852	None:intergenic
GGATAAGGTGAACCTTTAAT+AGG	0.279412	2:+18835116	None:intergenic
CAAAACCTTGATTAAACAAT+AGG	0.283013	2:+18833979	None:intergenic
CAGTGATGGACTTTCTTATA+AGG	0.284819	2:-18834072	MsaT007499.1:CDS
CTATTGTTTAATCAAGGTTT+TGG	0.313071	2:-18833978	MsaT007499.1:CDS
TAATTAGGTAACTTTGGATT+AGG	0.313774	2:+18836155	None:intergenic
TTGTGGGCTTGGAGAAAATA+TGG	0.327482	2:-18835146	MsaT007499.1:CDS
CAATGTGAAAGAAGAGAATA+TGG	0.337182	2:-18834138	MsaT007499.1:CDS
TATGGTCAGAAGCCTATTAA+AGG	0.340677	2:-18835128	MsaT007499.1:CDS
TCTCTTAAAGTTGAGAATAA+TGG	0.344831	2:+18836401	None:intergenic
TTCCTTCAGATTTGTGGGCT+TGG	0.351444	2:-18835157	MsaT007499.1:CDS
ATCCATTTCATCTCTTTGAT+TGG	0.356655	2:-18833914	MsaT007499.1:CDS
TCTTTCACATTGTTAACAAC+TGG	0.361228	2:+18834149	None:intergenic
GCAGAAGGTTTAATTGGTCT+TGG	0.364059	2:+18836101	None:intergenic
TTTCATCTCTTTGATTGGTC+AGG	0.365054	2:-18833909	MsaT007499.1:CDS
GACCAATCAAAGAGATGAAA+TGG	0.366081	2:+18833912	None:intergenic
GAGTTCAGATCTCATCTTCC+AGG	0.376813	2:-18836022	MsaT007499.1:CDS
TCGTTTAAGACCTGTATTCC+TGG	0.388718	2:+18836004	None:intergenic
GATTCATAATTAGGTAACTT+TGG	0.391610	2:+18836149	None:intergenic
TAGGTTATAACCAACATGTT+TGG	0.405752	2:+18834353	None:intergenic
GTGGTAATTCAAGTAATGAT+AGG	0.407677	2:-18833956	MsaT007499.1:CDS
AAGTAGTTCCTTCAGATTTG+TGG	0.419426	2:-18835163	MsaT007499.1:CDS
GGAACAAACATGAATATGTT+TGG	0.426445	2:-18836428	None:intergenic
GCTAAGGCATTTCTTTGTGT+TGG	0.434825	2:+18834305	None:intergenic
AGTAGTTCCTTCAGATTTGT+GGG	0.437348	2:-18835162	MsaT007499.1:CDS
TTAAACCTATTGTTTAATCA+AGG	0.440685	2:-18833984	MsaT007499.1:CDS
ATCTCATCTTCCAGGAATAC+AGG	0.440973	2:-18836014	MsaT007499.1:CDS
TGTCTACTATTTGCAGCTGC+TGG	0.441459	2:+18835194	None:intergenic
CTATTTGCAGCTGCTGGTGC+AGG	0.451080	2:+18835200	None:intergenic
CTTAGCATTAATATTGATGT+TGG	0.461905	2:+18836067	None:intergenic
AAAGTAACTTACCTTGGATA+AGG	0.462105	2:+18835101	None:intergenic
GCTGCAAATAGTAGACAAAC+TGG	0.465679	2:-18835188	MsaT007499.1:CDS
TGGTTCTTCAAATGAGTTGT+TGG	0.473949	2:+18833872	None:intergenic
ATGAAATGGATCTAAAACCT+TGG	0.480200	2:+18833926	None:intergenic
AGTACTTGTGATGTTGAAGT+AGG	0.496007	2:+18836340	None:intergenic
GGTTTAATTGGTCTTGGAGA+AGG	0.498591	2:+18836107	None:intergenic
GCAACATCAATTATAGAAGC+AGG	0.500612	2:+18836302	None:intergenic
AGATCTTGTTGAACCTGCTA+AGG	0.507584	2:+18834289	None:intergenic
TATAGATGCAGCAGTTCAAA+GGG	0.512628	2:-18834416	MsaT007499.1:CDS
TTATAGATGCAGCAGTTCAA+AGG	0.515496	2:-18834417	MsaT007499.1:CDS
TTGGTTGAAATAACAGCAGA+AGG	0.519861	2:+18836086	None:intergenic
CAACATCAATATTAATGCTA+AGG	0.530488	2:-18836066	MsaT007499.1:CDS
ACACAAAGAAATGCCTTAGC+AGG	0.532059	2:-18834302	MsaT007499.1:CDS
TGGACTTTCTTATAAGGTGA+TGG	0.535954	2:-18834066	MsaT007499.1:CDS
CTGCAAATTGAGATGGATGA+AGG	0.537894	2:-18834101	MsaT007499.1:CDS
GCATTTCTTTGTGTTGGCCA+TGG	0.541996	2:+18834311	None:intergenic
CTCCAAGCCCACAAATCTGA+AGG	0.549243	2:+18835155	None:intergenic
AGAGAAGCTGCAAATTGAGA+TGG	0.556854	2:-18834108	MsaT007499.1:CDS
GAGAACAATAATAACAGTGA+TGG	0.557395	2:-18834182	MsaT007499.1:CDS
TTAAAGGTTCACCTTATCCA+AGG	0.571044	2:-18835112	MsaT007499.1:intron
TTGAAGAACCAAACAAGAGA+AGG	0.573435	2:-18833860	MsaT007499.1:CDS
TGGTAATTCAAGTAATGATA+GGG	0.573489	2:-18833955	MsaT007499.1:CDS
CAGAACTGATCCAAACATGT+TGG	0.596203	2:-18834363	MsaT007499.1:CDS
ATGATTGTGTTCTGAAGTGT+AGG	0.601847	2:+18834334	None:intergenic
GGAATACAGGTCTTAAACGA+AGG	0.603168	2:-18836001	MsaT007499.1:intron
GGAAAATAGCAAAATTCATG+AGG	0.604467	2:-18834045	MsaT007499.1:CDS
GTTCAAAGGGATGTTCAGCT+AGG	0.605745	2:-18834403	MsaT007499.1:CDS
GATGAAGGAGAATTCAGTGA+TGG	0.613782	2:-18834086	MsaT007499.1:CDS
TAATGATAGGGATCAATCCA+AGG	0.614402	2:-18833943	MsaT007499.1:CDS
ATGTTGAAGTAGGAAGAAGA+AGG	0.618243	2:+18836350	None:intergenic
CTTCAGAACACAATCATCCA+TGG	0.626675	2:-18834328	MsaT007499.1:CDS
GATTCTCTTCTAGACAACAC+AGG	0.690701	2:-18836044	MsaT007499.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	18833854	18836441	18833854	ID=MsaG007499
Chr2	mRNA	18833854	18836441	18833854	ID=MsaT007499.1;Parent=MsaG007499
Chr2	exon	18833854	18834445	18833854	ID=MsaT007499.1.exon3;Parent=MsaT007499.1
Chr2	CDS	18833854	18834445	18833854	ID=cds.MsaT007499.1;Parent=MsaT007499.1
Chr2	exon	18835113	18835253	18835113	ID=MsaT007499.1.exon2;Parent=MsaT007499.1
Chr2	CDS	18835113	18835253	18835113	ID=cds.MsaT007499.1;Parent=MsaT007499.1
Chr2	exon	18836002	18836441	18836002	ID=MsaT007499.1.exon1;Parent=MsaT007499.1
Chr2	CDS	18836002	18836441	18836002	ID=cds.MsaT007499.1;Parent=MsaT007499.1

Gene Sequence

>MsaT007499.1

ATGAATATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCCTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTTCTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATCATGAGATGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCTAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCCAGGAATACAGGTCTTAAACGAAGGAAGAATCAAGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACTGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCCTTAGCAGGTTCAACAAGATCTCAACCATCCAAAAACAATACTTCTACAAAGAATTCAGAAACATCACAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAGTTGTTAACAATGTGAAAGAAGAGAATATGGAAGATATAGAGAAGCTGCAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAGGACTTTTTTGCTGAATTGGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCCAAGGTTTTAGATCCATTTCATCTCTTTGATTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAACAAGAGAAGGCTATGA

Protein sequence

>MsaT007499.1

MNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPASIIDVASSGVSVTTSSSSSASVFALDHEMRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSTKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSKVLDPFHLFDWSGDNNNTNNSFEEPNKRRL*