AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG007534


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG007534 MtrunA17_Chr2g0293911 96.024 327 13 0 1 327 1 327 0.0 527
MsaG007534 MtrunA17_Chr4g0068921 85.987 157 22 0 1 157 1 157 2.46e-89 265
MsaG007534 MtrunA17_Chr1g0194301 69.032 155 48 0 11 165 20 174 2.84e-82 250
MsaG007534 MtrunA17_Chr1g0194291 68.047 169 47 2 18 186 15 176 4.87e-81 247
MsaG007534 MtrunA17_Chr1g0209661 43.046 302 162 3 18 319 21 312 1.10e-78 243
MsaG007534 MtrunA17_Chr7g0228231 82.301 113 20 0 18 130 8 120 1.58e-67 210
MsaG007534 MtrunA17_Chr6g0450101 78.947 114 24 0 18 131 8 121 8.17e-66 206
MsaG007534 MtrunA17_Chr1g0168661 70.476 105 31 0 25 129 22 126 9.66e-51 169
MsaG007534 MtrunA17_Chr1g0186061 59.200 125 48 1 5 129 4 125 2.39e-49 165
MsaG007534 MtrunA17_Chr5g0410961 56.693 127 53 1 20 146 8 132 6.12e-46 159
MsaG007534 MtrunA17_Chr8g0346561 59.664 119 46 1 21 137 9 127 2.79e-44 153
MsaG007534 MtrunA17_Chr2g0327821 57.273 110 47 0 23 132 5 114 4.46e-44 151
MsaG007534 MtrunA17_Chr2g0281071 58.559 111 46 0 24 134 13 123 9.83e-44 153
MsaG007534 MtrunA17_Chr2g0323411 61.682 107 41 0 20 126 8 114 1.06e-43 152
MsaG007534 MtrunA17_Chr4g0070611 62.385 109 41 0 24 132 12 120 2.51e-43 151
MsaG007534 MtrunA17_Chr4g0048511 58.559 111 46 0 24 134 13 123 2.61e-43 152
MsaG007534 MtrunA17_Chr7g0275911 63.303 109 40 0 21 129 9 117 3.05e-43 149
MsaG007534 MtrunA17_Chr7g0228891 53.488 129 59 1 20 147 8 136 6.34e-43 149
MsaG007534 MtrunA17_Chr3g0115821 55.000 120 54 0 20 139 8 127 6.99e-43 151
MsaG007534 MtrunA17_Chr5g0395281 55.556 117 52 0 18 134 6 122 7.13e-43 150
MsaG007534 MtrunA17_Chr4g0070641 62.385 109 41 0 24 132 12 120 1.04e-42 145
MsaG007534 MtrunA17_Chr4g0039971 56.522 115 50 0 20 134 9 123 1.05e-42 150
MsaG007534 MtrunA17_Chr3g0121241 63.208 106 39 0 21 126 39 144 1.98e-42 149
MsaG007534 MtrunA17_Chr1g0180391 58.879 107 44 0 23 129 18 124 2.70e-42 146
MsaG007534 MtrunA17_Chr1g0187761 54.622 119 54 0 20 138 8 126 3.20e-42 147
MsaG007534 MtrunA17_Chr1g0203411 58.879 107 44 0 24 130 12 118 6.26e-42 147
MsaG007534 MtrunA17_Chr3g0099131 54.630 108 49 0 23 130 40 147 8.10e-42 152
MsaG007534 MtrunA17_Chr4g0030881 55.652 115 44 1 25 132 8 122 8.59e-42 145
MsaG007534 MtrunA17_Chr6g0453471 52.381 126 59 1 20 144 8 133 1.96e-41 147
MsaG007534 MtrunA17_Chr8g0385321 62.376 101 38 0 26 126 14 114 2.34e-41 146
MsaG007534 MtrunA17_Chr8g0354661 47.407 135 64 1 2 129 8 142 3.64e-41 150
MsaG007534 MtrunA17_Chr7g0217741 53.043 115 54 0 20 134 8 122 4.57e-41 145
MsaG007534 MtrunA17_Chr1g0151941 57.407 108 45 1 20 126 8 115 6.46e-41 143
MsaG007534 MtrunA17_Chr4g0068061 39.267 191 93 2 20 210 8 175 7.15e-41 145
MsaG007534 MtrunA17_Chr1g0193371 54.310 116 53 0 24 139 12 127 7.18e-41 146
MsaG007534 MtrunA17_Chr4g0057031 53.913 115 53 0 20 134 8 122 8.07e-41 144
MsaG007534 MtrunA17_Chr3g0110351 50.794 126 61 1 20 144 8 133 8.29e-41 144
MsaG007534 MtrunA17_Chr2g0328771 56.481 108 47 0 24 131 20 127 9.69e-41 144
MsaG007534 MtrunA17_Chr4g0037141 50.649 154 66 2 26 170 14 166 9.86e-41 144
MsaG007534 MtrunA17_Chr3g0131121 63.366 101 37 0 26 126 14 114 1.19e-40 144
MsaG007534 MtrunA17_Chr2g0330041 56.311 103 45 0 24 126 12 114 1.55e-40 146
MsaG007534 MtrunA17_Chr1g0167691 58.252 103 43 0 24 126 12 114 1.80e-40 142
MsaG007534 MtrunA17_Chr4g0032401 56.481 108 47 0 24 131 17 124 1.94e-40 144
MsaG007534 MtrunA17_Chr7g0274581 52.252 111 53 0 20 130 8 118 2.00e-40 140
MsaG007534 MtrunA17_Chr5g0434571 53.043 115 54 0 20 134 44 158 2.44e-40 144
MsaG007534 MtrunA17_Chr3g0080861 54.717 106 48 0 24 129 37 142 3.92e-40 147
MsaG007534 MtrunA17_Chr8g0349261 56.881 109 46 1 19 126 8 116 5.50e-40 142
MsaG007534 MtrunA17_Chr4g0042671 51.639 122 59 0 20 141 8 129 5.52e-40 145
MsaG007534 MtrunA17_Chr4g0044421 55.085 118 53 0 19 136 7 124 5.95e-40 139
MsaG007534 MtrunA17_Chr5g0435101 49.587 121 61 0 20 140 7 127 8.48e-40 139
MsaG007534 MtrunA17_Chr7g0270891 55.856 111 49 0 24 134 12 122 8.83e-40 143
MsaG007534 MtrunA17_Chr7g0261281 55.856 111 49 0 20 130 8 118 8.93e-40 141
MsaG007534 MtrunA17_Chr8g0387421 57.009 107 46 0 24 130 12 118 9.12e-40 142
MsaG007534 MtrunA17_Chr7g0217221 40.556 180 96 4 20 189 8 186 1.78e-39 140
MsaG007534 MtrunA17_Chr1g0167661 57.282 103 44 0 24 126 12 114 1.94e-39 139
MsaG007534 MtrunA17_Chr2g0311221 57.692 104 44 0 20 123 10 113 1.97e-39 141
MsaG007534 MtrunA17_Chr1g0154031 54.717 106 48 0 24 129 76 181 2.34e-39 143
MsaG007534 MtrunA17_Chr4g0022901 55.455 110 49 0 19 128 8 117 3.20e-39 139
MsaG007534 MtrunA17_Chr4g0022931 54.464 112 51 0 19 130 8 119 6.71e-39 139
MsaG007534 MtrunA17_Chr1g0203441 52.101 119 57 0 25 143 14 132 7.38e-39 138
MsaG007534 MtrunA17_Chr5g0397231 61.856 97 37 0 24 120 12 108 8.80e-39 140
MsaG007534 MtrunA17_Chr4g0022881 56.190 105 46 0 25 129 13 117 9.39e-39 137
MsaG007534 MtrunA17_Chr8g0342541 54.369 103 47 0 24 126 12 114 1.03e-38 140
MsaG007534 MtrunA17_Chr4g0022911 56.190 105 46 0 24 128 13 117 1.73e-38 138
MsaG007534 MtrunA17_Chr1g0193801 54.054 111 51 0 24 134 12 122 1.76e-38 140
MsaG007534 MtrunA17_Chr2g0309911 53.398 103 48 0 24 126 11 113 1.98e-38 138
MsaG007534 MtrunA17_Chr4g0055981 56.881 109 47 0 24 132 55 163 2.45e-38 136
MsaG007534 MtrunA17_Chr2g0323351 56.075 107 47 0 20 126 8 114 5.01e-38 135
MsaG007534 MtrunA17_Chr3g0088461 55.660 106 47 0 24 129 22 127 5.72e-38 138
MsaG007534 MtrunA17_Chr8g0342521 54.369 103 47 0 24 126 12 114 5.97e-38 138
MsaG007534 MtrunA17_Chr7g0271241 55.172 116 52 0 24 139 12 127 7.18e-38 139
MsaG007534 MtrunA17_Chr8g0343831 54.464 112 49 1 15 126 1 110 9.61e-38 135
MsaG007534 MtrunA17_Chr3g0092401 49.107 112 57 0 20 131 9 120 1.11e-37 136
MsaG007534 MtrunA17_Chr6g0452271 50.435 115 57 0 20 134 8 122 1.37e-37 137
MsaG007534 MtrunA17_Chr1g0211161 55.340 103 46 0 24 126 13 115 4.90e-37 132
MsaG007534 MtrunA17_Chr4g0060721 51.402 107 52 0 20 126 9 115 4.96e-37 135
MsaG007534 MtrunA17_Chr7g0254411 51.402 107 52 0 20 126 8 114 5.12e-37 135
MsaG007534 MtrunA17_Chr1g0194951 57.282 103 44 0 24 126 12 114 6.07e-37 136
MsaG007534 MtrunA17_Chr4g0022891 47.656 128 60 1 20 147 8 128 1.14e-36 132
MsaG007534 MtrunA17_Chr3g0117091 52.252 111 53 0 24 134 12 122 1.29e-36 134
MsaG007534 MtrunA17_Chr4g0058631 54.369 103 47 0 24 126 12 114 2.47e-36 134
MsaG007534 MtrunA17_Chr6g0453211 53.398 103 48 0 20 122 8 110 3.70e-36 132
MsaG007534 MtrunA17_Chr3g0103281 49.593 123 61 1 23 144 11 133 4.16e-36 132
MsaG007534 MtrunA17_Chr4g0028311 54.630 108 48 1 20 126 8 115 6.65e-36 132
MsaG007534 MtrunA17_Chr6g0470971 54.902 102 46 0 25 126 15 116 8.54e-36 130
MsaG007534 MtrunA17_Chr5g0417821 50.442 113 56 0 22 134 5 117 1.94e-35 130
MsaG007534 MtrunA17_Chr1g0192411 48.361 122 58 1 8 129 1 117 3.28e-35 132
MsaG007534 MtrunA17_Chr8g0342481 52.885 104 48 1 24 126 12 115 3.56e-35 132
MsaG007534 MtrunA17_Chr2g0322521 46.774 124 62 1 10 129 11 134 5.56e-35 131
MsaG007534 MtrunA17_Chr3g0135311 54.630 108 48 1 20 126 8 115 7.42e-35 130
MsaG007534 MtrunA17_Chr5g0400821 37.674 215 121 6 20 222 8 221 1.92e-34 128
MsaG007534 MtrunA17_Chr1g0152011 53.704 108 49 1 20 126 8 115 2.06e-34 128
MsaG007534 MtrunA17_Chr2g0327351 53.846 104 47 1 20 122 8 111 2.95e-34 127
MsaG007534 MtrunA17_Chr8g0334881 44.068 118 65 1 15 131 1 118 4.56e-34 127
MsaG007534 MtrunA17_Chr7g0240821 36.316 190 111 3 29 215 6 188 1.86e-33 123
MsaG007534 MtrunA17_Chr7g0269831 53.211 109 51 0 20 128 8 116 3.11e-33 125
MsaG007534 MtrunA17_Chr7g0264641 50.000 108 53 1 20 126 8 115 3.97e-33 123
MsaG007534 MtrunA17_Chr4g0054391 54.902 102 45 1 20 120 8 109 1.15e-32 122
MsaG007534 MtrunA17_Chr4g0072751 53.846 104 47 1 20 122 8 111 1.18e-31 121
MsaG007534 MtrunA17_Chr5g0440781 46.296 108 57 1 23 129 11 118 2.53e-31 116
MsaG007534 MtrunA17_Chr5g0440761 46.296 108 57 1 23 129 11 118 6.11e-31 117
MsaG007534 MtrunA17_Chr5g0441141 46.296 108 57 1 23 129 11 118 7.00e-31 117
MsaG007534 MtrunA17_Chr3g0099141 49.438 89 45 0 20 108 36 124 7.09e-31 114
MsaG007534 MtrunA17_Chr5g0441131 42.609 115 65 1 16 129 1 115 1.41e-30 114
MsaG007534 MtrunA17_Chr5g0434931 50.485 103 51 0 24 126 35 137 2.35e-30 116
MsaG007534 MtrunA17_Chr6g0487491 49.138 116 50 2 20 126 8 123 2.98e-30 115
MsaG007534 MtrunA17_Chr8g0360111 53.465 101 47 0 24 124 25 125 3.82e-30 115
MsaG007534 MtrunA17_Chr5g0434831 51.456 103 50 0 24 126 7 109 5.60e-30 112
MsaG007534 MtrunA17_Chr5g0434911 50.485 103 51 0 24 126 21 123 1.15e-29 114
MsaG007534 MtrunA17_Chr7g0247131 60.759 79 31 0 56 134 10 88 2.85e-29 113
MsaG007534 MtrunA17_Chr4g0013361 42.056 107 61 1 24 129 10 116 3.30e-29 113
MsaG007534 MtrunA17_Chr7g0228991 48.649 111 57 0 16 126 21 131 3.45e-29 113
MsaG007534 MtrunA17_Chr7g0220341 46.087 115 60 1 16 128 17 131 4.16e-29 112
MsaG007534 MtrunA17_Chr5g0434841 50.485 103 51 0 24 126 20 122 1.18e-28 112
MsaG007534 MtrunA17_Chr4g0042611 53.086 81 38 0 20 100 8 88 9.28e-28 103
MsaG007534 MtrunA17_Chr5g0401731 29.825 228 143 4 21 248 10 220 1.68e-27 109
MsaG007534 MtrunA17_Chr6g0454921 41.322 121 70 1 14 134 3 122 3.23e-27 106
MsaG007534 MtrunA17_Chr7g0238631 44.231 104 57 1 23 126 110 212 2.53e-26 109
MsaG007534 MtrunA17_Chr5g0395221 53.012 83 39 0 18 100 6 88 3.32e-26 99.8
MsaG007534 MtrunA17_Chr4g0068911 56.897 116 41 5 218 327 1 113 4.33e-26 100
MsaG007534 MtrunA17_Chr2g0323321 55.556 81 36 0 24 104 11 91 7.12e-26 99.8
MsaG007534 MtrunA17_Chr3g0139671 33.974 156 96 2 23 178 82 230 2.17e-25 107
MsaG007534 MtrunA17_Chr2g0294811 53.086 81 38 0 20 100 8 88 3.67e-25 97.8
MsaG007534 MtrunA17_Chr8g0342511 55.263 76 34 0 24 99 12 87 5.42e-25 96.7
MsaG007534 MtrunA17_Chr5g0429661 37.037 135 82 2 9 141 103 236 1.01e-24 102
MsaG007534 MtrunA17_Chr8g0342531 51.899 79 38 0 23 101 11 89 1.21e-24 98.2
MsaG007534 MtrunA17_Chr4g0008551 43.689 103 57 1 26 128 38 139 4.08e-24 100
MsaG007534 MtrunA17_Chr3g0133601 41.284 109 63 1 20 128 31 138 4.44e-24 98.2
MsaG007534 MtrunA17_Chr8g0342461 53.247 77 35 1 26 101 14 90 6.65e-24 95.5
MsaG007534 MtrunA17_Chr6g0460661 38.739 111 67 1 29 139 19 128 1.04e-23 95.5
MsaG007534 MtrunA17_Chr1g0157731 40.385 104 61 1 23 126 88 190 1.08e-23 102
MsaG007534 MtrunA17_Chr8g0342471 53.247 77 35 1 26 101 14 90 1.80e-23 94.4
MsaG007534 MtrunA17_Chr3g0117511 37.838 111 67 2 21 130 178 287 9.29e-23 98.2
MsaG007534 MtrunA17_Chr4g0053431 40.187 107 63 1 22 128 1 106 1.24e-22 95.5
MsaG007534 MtrunA17_Chr4g0058991 33.083 133 88 1 1 133 184 315 2.76e-22 97.1
MsaG007534 MtrunA17_Chr5g0425591 41.304 92 53 1 16 106 1 92 1.18e-21 87.8
MsaG007534 MtrunA17_Chr7g0228531 37.008 127 78 2 21 147 215 339 2.26e-21 94.0
MsaG007534 MtrunA17_Chr7g0254261 30.387 181 110 4 26 206 89 253 5.37e-21 92.4
MsaG007534 MtrunA17_Chr5g0397841 43.878 98 54 1 23 120 107 203 7.26e-21 92.8
MsaG007534 MtrunA17_Chr6g0480581 44.211 95 52 1 26 120 4 97 1.25e-20 89.4
MsaG007534 MtrunA17_Chr5g0417621 40.000 105 62 1 26 130 134 237 3.30e-20 90.9
MsaG007534 MtrunA17_Chr6g0460671 36.842 114 71 1 26 139 99 211 4.29e-20 89.7
MsaG007534 MtrunA17_Chr6g0453751 42.857 91 43 2 24 105 20 110 4.96e-20 84.7
MsaG007534 MtrunA17_Chr4g0042501 39.048 105 63 1 26 130 105 208 8.36e-20 89.4
MsaG007534 MtrunA17_Chr7g0229101 57.971 69 29 0 57 125 5 73 8.81e-20 86.3
MsaG007534 MtrunA17_Chr5g0437321 41.071 112 61 2 9 120 6 112 1.04e-19 87.4
MsaG007534 MtrunA17_Chr7g0238651 36.283 113 70 1 26 136 7 119 1.10e-19 88.6
MsaG007534 MtrunA17_Chr3g0093811 49.412 85 42 1 57 140 15 99 3.09e-19 85.9
MsaG007534 MtrunA17_Chr3g0125801 34.646 127 82 1 18 144 8 133 1.12e-18 84.7
MsaG007534 MtrunA17_Chr5g0434901 57.353 68 29 0 58 125 7 74 1.38e-18 80.1
MsaG007534 MtrunA17_Chr7g0229131 51.389 72 35 0 57 128 5 76 4.99e-18 80.5
MsaG007534 MtrunA17_Chr7g0228401 43.023 86 48 1 35 120 288 372 5.48e-18 84.7
MsaG007534 MtrunA17_Chr8g0362231 37.143 140 73 4 29 159 25 158 7.71e-18 84.0
MsaG007534 MtrunA17_Chr5g0416341 40.594 101 59 1 29 129 29 128 1.90e-17 82.8
MsaG007534 MtrunA17_Chr7g0233061 41.121 107 52 4 26 127 180 280 2.03e-17 82.0
MsaG007534 MtrunA17_Chr7g0228481 30.719 153 102 3 12 164 208 356 1.13e-16 80.5
MsaG007534 MtrunA17_Chr1g0177901 40.698 86 50 1 35 120 3 87 7.02e-16 75.5
MsaG007534 MtrunA17_Chr1g0193901 42.222 90 50 2 18 105 5 94 5.08e-13 64.7
MsaG007534 MtrunA17_Chr1g0193891 42.222 90 50 2 18 105 5 94 5.08e-13 64.7
MsaG007534 MtrunA17_Chr1g0193871 42.222 90 50 2 18 105 5 94 5.08e-13 64.7
MsaG007534 MtrunA17_Chr1g0193881 42.222 90 50 2 18 105 5 94 5.08e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG007534 AT5G49620.1 54.462 325 82 12 19 324 21 298 8.33e-89 268
MsaG007534 AT1G48000.1 74.675 154 35 1 22 175 30 179 5.92e-85 256
MsaG007534 AT5G49620.2 52.212 339 82 13 19 324 21 312 5.98e-85 259
MsaG007534 AT3G06490.1 50.148 337 111 11 1 316 1 301 7.57e-85 259
MsaG007534 AT2G47190.1 74.648 142 36 0 19 160 15 156 1.20e-78 241
MsaG007534 AT1G68320.1 57.360 197 80 2 23 219 18 210 6.15e-75 232
MsaG007534 AT1G25340.1 63.576 151 55 0 25 175 19 169 8.49e-70 219
MsaG007534 AT3G27810.1 80.000 110 22 0 21 130 17 126 2.74e-65 206
MsaG007534 AT1G25340.2 60.927 151 54 1 25 175 19 164 2.36e-64 205
MsaG007534 AT1G25340.3 60.927 151 54 1 25 175 19 164 5.96e-64 205
MsaG007534 AT5G40350.1 80.952 105 20 0 23 127 16 120 1.04e-62 198
MsaG007534 AT3G01530.1 71.681 113 32 0 17 129 18 130 8.29e-61 193
MsaG007534 AT3G24310.1 67.890 109 35 0 21 129 15 123 3.97e-50 168
MsaG007534 AT4G13480.1 68.571 105 33 0 25 129 7 111 2.62e-49 166
MsaG007534 AT3G30210.1 66.667 105 35 0 25 129 28 132 3.56e-49 166
MsaG007534 AT3G02940.2 60.000 115 46 0 20 134 8 122 1.77e-45 157
MsaG007534 AT5G59780.3 59.091 110 45 0 23 132 7 116 3.08e-45 154
MsaG007534 AT3G02940.1 60.000 115 46 0 20 134 8 122 3.66e-45 157
MsaG007534 AT3G02940.3 60.000 115 46 0 20 134 8 122 3.66e-45 157
MsaG007534 AT3G46130.1 58.929 112 46 0 25 136 10 121 3.80e-45 155
MsaG007534 AT5G16770.4 53.676 136 61 2 20 153 8 143 5.51e-44 154
MsaG007534 AT5G16770.3 53.676 136 61 2 20 153 8 143 5.51e-44 154
MsaG007534 AT5G16770.1 53.676 136 61 2 20 153 8 143 9.40e-44 153
MsaG007534 AT5G16770.2 53.676 136 61 2 20 153 8 143 9.40e-44 153
MsaG007534 AT5G54230.1 56.757 111 48 0 24 134 12 122 1.54e-43 152
MsaG007534 AT3G27810.2 85.135 74 11 0 57 130 4 77 1.80e-43 148
MsaG007534 AT3G13540.1 55.285 123 55 0 21 143 20 142 3.68e-43 149
MsaG007534 AT4G05100.1 58.559 111 46 0 24 134 13 123 5.50e-43 151
MsaG007534 AT5G65230.1 54.918 122 55 0 18 139 6 127 6.88e-43 150
MsaG007534 AT4G34990.1 67.327 101 33 0 26 126 14 114 7.14e-43 149
MsaG007534 AT4G21440.1 56.757 111 48 0 24 134 12 122 7.53e-43 151
MsaG007534 AT4G28110.1 58.879 107 44 0 20 126 8 114 1.29e-42 149
MsaG007534 AT3G23250.1 40.462 173 99 1 20 192 8 176 1.30e-42 149
MsaG007534 AT5G15310.1 55.652 115 51 0 20 134 8 122 1.73e-42 150
MsaG007534 AT5G15310.2 55.652 115 51 0 20 134 8 122 1.77e-42 149
MsaG007534 AT5G15310.4 55.652 115 51 0 20 134 8 122 1.88e-42 147
MsaG007534 AT1G22640.1 57.265 117 50 0 24 140 12 128 2.47e-42 147
MsaG007534 AT1G16490.1 58.879 107 44 0 20 126 10 116 5.25e-42 147
MsaG007534 AT3G01140.2 52.033 123 59 0 20 142 8 130 5.95e-42 149
MsaG007534 AT5G10280.1 55.652 115 51 0 20 134 8 122 7.29e-42 148
MsaG007534 AT1G34670.1 50.746 134 65 1 20 153 8 140 1.07e-41 149
MsaG007534 AT3G01140.1 52.033 123 59 0 20 142 51 173 1.68e-41 149
MsaG007534 AT5G14340.1 56.522 115 50 0 20 134 20 134 1.69e-41 145
MsaG007534 AT1G35515.1 61.165 103 40 0 24 126 12 114 1.93e-41 144
MsaG007534 AT1G09540.1 55.172 116 52 0 24 139 12 127 3.20e-41 147
MsaG007534 AT4G09460.1 62.376 101 38 0 26 126 14 114 3.24e-41 144
MsaG007534 AT4G12350.1 43.275 171 90 2 20 190 8 171 3.24e-41 145
MsaG007534 AT1G18570.1 60.377 106 42 0 21 126 10 115 3.54e-41 147
MsaG007534 AT4G22680.1 52.500 120 57 0 20 139 8 127 3.56e-41 144
MsaG007534 AT5G07690.1 58.252 103 43 0 24 126 12 114 6.00e-41 146
MsaG007534 AT2G16720.1 61.165 103 40 0 24 126 12 114 8.09e-41 144
MsaG007534 AT5G40350.2 84.507 71 11 0 57 127 5 75 9.44e-41 140
MsaG007534 AT3G53200.1 60.377 106 42 0 21 126 6 111 1.04e-40 142
MsaG007534 AT1G57560.1 60.194 103 41 0 24 126 12 114 1.14e-40 145
MsaG007534 AT4G38620.1 62.376 101 38 0 26 126 14 114 1.33e-40 144
MsaG007534 AT2G47460.1 59.813 107 43 0 20 126 8 114 1.37e-40 146
MsaG007534 AT5G40330.1 53.509 114 53 0 13 126 1 114 1.56e-40 141
MsaG007534 AT1G57560.2 60.194 103 41 0 24 126 12 114 1.60e-40 143
MsaG007534 AT3G13890.2 56.311 103 45 0 24 126 12 114 1.62e-40 145
MsaG007534 AT5G07700.1 57.282 103 44 0 24 126 12 114 1.95e-40 145
MsaG007534 AT5G07700.2 57.282 103 44 0 24 126 12 114 1.95e-40 145
MsaG007534 AT5G14750.1 56.731 104 45 0 23 126 15 118 1.99e-40 140
MsaG007534 AT1G79180.1 54.955 111 50 0 20 130 10 120 2.12e-40 143
MsaG007534 AT5G61420.2 57.282 103 44 0 24 126 12 114 3.86e-40 144
MsaG007534 AT1G06180.1 52.893 121 57 0 20 140 8 128 4.57e-40 141
MsaG007534 AT1G66230.1 52.174 115 55 0 20 134 8 122 5.79e-40 142
MsaG007534 AT3G11440.2 54.369 103 47 0 24 126 41 143 6.18e-40 146
MsaG007534 AT3G47600.1 51.282 117 55 1 20 134 8 124 6.70e-40 143
MsaG007534 AT3G61250.1 50.833 120 59 0 20 139 8 127 7.32e-40 142
MsaG007534 AT1G56160.1 57.009 107 46 0 20 126 10 116 7.89e-40 142
MsaG007534 AT2G31180.1 57.944 107 45 0 20 126 8 114 8.15e-40 140
MsaG007534 AT5G26660.1 54.955 111 50 0 24 134 12 122 9.01e-40 143
MsaG007534 AT5G60890.1 55.652 115 51 0 21 135 9 123 1.05e-39 142
MsaG007534 AT5G16600.1 52.174 115 55 0 20 134 8 122 1.10e-39 142
MsaG007534 AT3G27920.1 56.731 104 45 0 23 126 13 116 1.46e-39 139
MsaG007534 AT4G26930.1 55.140 107 48 0 24 130 19 125 1.75e-39 143
MsaG007534 AT3G11440.3 52.830 106 50 0 24 129 41 146 3.25e-39 145
MsaG007534 AT3G11440.4 52.830 106 50 0 24 129 41 146 3.25e-39 145
MsaG007534 AT3G11440.1 52.830 106 50 0 24 129 41 146 3.25e-39 145
MsaG007534 AT5G49330.1 57.944 107 45 0 20 126 8 114 4.27e-39 141
MsaG007534 AT5G35550.1 61.538 104 40 0 23 126 13 116 4.39e-39 139
MsaG007534 AT5G06100.1 53.774 106 49 0 24 129 32 137 4.69e-39 143
MsaG007534 AT1G63910.1 56.075 107 47 0 24 130 12 118 8.64e-39 141
MsaG007534 AT4G17785.2 35.521 259 145 6 19 266 8 255 9.58e-39 140
MsaG007534 AT3G62610.1 57.009 107 46 0 20 126 8 114 9.77e-39 140
MsaG007534 AT4G17785.1 35.521 259 145 6 19 266 8 255 1.31e-38 140
MsaG007534 AT3G08500.1 58.491 106 44 0 24 129 30 135 1.39e-38 140
MsaG007534 AT2G32460.1 51.887 106 51 0 24 129 18 123 1.87e-38 142
MsaG007534 AT5G06100.5 53.774 106 49 0 24 129 32 137 1.93e-38 143
MsaG007534 AT5G06100.2 53.774 106 49 0 24 129 32 137 1.93e-38 143
MsaG007534 AT5G06100.3 53.774 106 49 0 24 129 32 137 1.93e-38 143
MsaG007534 AT5G06100.4 53.774 106 49 0 24 129 32 137 1.93e-38 143
MsaG007534 AT2G32460.2 51.887 106 51 0 24 129 6 111 1.94e-38 142
MsaG007534 AT5G62320.1 48.872 133 61 1 20 145 9 141 3.22e-38 136
MsaG007534 AT5G55020.1 51.327 113 55 0 18 130 20 132 4.44e-38 142
MsaG007534 AT1G74080.1 57.282 103 44 0 24 126 12 114 1.00e-37 137
MsaG007534 AT5G52600.1 56.311 103 45 0 24 126 12 114 1.03e-37 134
MsaG007534 AT5G62470.2 50.000 112 56 0 20 131 8 119 1.05e-37 138
MsaG007534 AT5G12870.1 51.852 108 52 0 24 131 18 125 1.30e-37 135
MsaG007534 AT3G13890.1 51.786 112 45 1 24 126 12 123 1.53e-37 137
MsaG007534 AT1G08810.1 46.032 126 68 0 20 145 8 133 1.78e-37 135
MsaG007534 AT1G74650.1 49.558 113 57 0 20 132 8 120 1.83e-37 137
MsaG007534 AT3G12720.1 51.456 103 50 0 24 126 22 124 2.61e-37 135
MsaG007534 AT4G01680.3 56.311 103 45 0 24 126 12 114 4.04e-37 133
MsaG007534 AT4G01680.1 54.717 106 48 0 24 129 12 117 7.30e-37 135
MsaG007534 AT2G26960.1 50.442 113 52 1 18 126 10 122 2.27e-36 136
MsaG007534 AT3G28910.1 49.565 115 58 0 20 134 8 122 6.44e-36 132
MsaG007534 AT4G37780.1 53.704 108 49 1 20 126 8 115 8.68e-36 131
MsaG007534 AT5G62470.1 50.000 112 55 1 20 131 8 118 8.90e-36 132
MsaG007534 AT5G56110.1 49.593 123 61 1 23 144 11 133 3.83e-35 130
MsaG007534 AT1G74430.1 53.398 103 48 0 24 126 12 114 3.94e-35 129
MsaG007534 AT4G25560.1 53.922 102 47 0 25 126 11 112 5.39e-35 129
MsaG007534 AT3G49690.1 53.704 108 49 1 20 126 8 115 1.20e-34 129
MsaG007534 AT3G12820.1 53.271 107 50 0 20 126 10 116 1.41e-34 127
MsaG007534 AT3G48920.1 50.980 102 50 0 25 126 19 120 1.91e-34 127
MsaG007534 AT5G57620.1 52.778 108 50 1 20 126 8 115 2.46e-34 128
MsaG007534 AT3G28470.1 50.485 103 51 0 20 122 8 110 2.74e-34 128
MsaG007534 AT5G52260.1 55.882 102 45 0 25 126 13 114 3.36e-34 126
MsaG007534 AT5G23000.1 51.852 108 51 1 20 126 8 115 3.43e-34 128
MsaG007534 AT1G79180.2 42.361 144 50 1 20 130 10 153 6.41e-34 127
MsaG007534 AT2G36890.1 53.704 108 49 1 20 126 8 115 8.98e-34 126
MsaG007534 AT5G65790.1 48.000 125 60 2 20 143 8 128 1.03e-33 127
MsaG007534 AT4G01680.2 49.153 118 48 1 24 129 12 129 1.72e-33 126
MsaG007534 AT2G36890.2 53.704 108 49 1 20 126 49 156 1.73e-33 126
MsaG007534 AT3G46130.3 64.634 82 29 0 55 136 8 89 3.37e-33 122
MsaG007534 AT5G59780.2 68.421 76 24 0 57 132 20 95 7.63e-33 121
MsaG007534 AT3G46130.4 66.250 80 27 0 57 136 20 99 1.03e-32 122
MsaG007534 AT1G66370.1 50.000 110 55 0 24 133 8 117 2.54e-32 121
MsaG007534 AT3G60460.1 44.545 110 60 1 23 131 10 119 8.46e-32 121
MsaG007534 AT1G18710.1 49.515 103 52 0 24 126 12 114 5.69e-31 118
MsaG007534 AT3G53200.2 67.143 70 23 0 57 126 9 78 3.33e-29 111
MsaG007534 AT1G66380.1 53.398 103 48 0 24 126 8 110 4.03e-28 106
MsaG007534 AT1G56650.1 49.138 116 58 1 24 139 8 122 6.90e-28 109
MsaG007534 AT5G26660.2 58.974 78 32 0 57 134 14 91 2.86e-27 109
MsaG007534 AT1G66390.1 53.398 103 48 0 24 126 8 110 5.75e-27 107
MsaG007534 AT5G35550.2 63.158 76 28 0 51 126 44 119 1.19e-26 106
MsaG007534 AT3G47600.2 57.500 80 32 1 57 134 39 118 7.75e-26 105
MsaG007534 AT5G11050.1 38.519 135 75 3 26 154 105 237 1.15e-25 106
MsaG007534 AT2G26950.1 39.640 111 63 1 17 123 5 115 1.94e-25 105
MsaG007534 AT5G11510.3 43.269 104 58 1 23 126 78 180 2.66e-25 107
MsaG007534 AT5G11510.1 43.269 104 58 1 23 126 78 180 2.66e-25 107
MsaG007534 AT5G11510.4 43.269 104 58 1 23 126 78 180 2.66e-25 107
MsaG007534 AT5G11510.5 43.269 104 58 1 23 126 78 180 3.11e-25 107
MsaG007534 AT5G11510.2 43.269 104 58 1 23 126 78 180 3.16e-25 107
MsaG007534 AT3G09370.2 41.121 107 62 1 23 129 132 237 7.03e-25 105
MsaG007534 AT3G09370.1 41.121 107 62 1 23 129 127 232 7.47e-25 105
MsaG007534 AT3G09370.3 41.121 107 62 1 23 129 140 245 1.00e-24 104
MsaG007534 AT5G14750.3 62.687 67 25 0 60 126 18 84 1.19e-24 98.6
MsaG007534 AT3G12820.2 64.179 67 24 0 60 126 2 68 1.28e-24 99.0
MsaG007534 AT5G58850.1 38.525 122 68 2 23 138 102 222 2.07e-24 103
MsaG007534 AT3G27785.1 41.667 108 61 2 26 132 189 295 2.42e-24 103
MsaG007534 AT5G02320.1 41.346 104 60 1 23 126 124 226 2.59e-24 103
MsaG007534 AT5G02320.2 41.346 104 60 1 23 126 124 226 2.59e-24 103
MsaG007534 AT5G02320.3 41.346 104 60 1 23 126 64 166 5.35e-24 102
MsaG007534 AT4G18770.1 40.000 110 65 1 24 133 215 323 6.52e-24 101
MsaG007534 AT2G23290.1 42.593 108 61 1 21 128 8 114 1.14e-23 99.4
MsaG007534 AT4G32730.5 38.462 104 63 1 23 126 84 186 8.37e-23 99.8
MsaG007534 AT4G32730.4 38.462 104 63 1 23 126 84 186 8.37e-23 99.8
MsaG007534 AT4G32730.3 38.462 104 63 1 23 126 84 186 8.37e-23 99.8
MsaG007534 AT4G32730.2 38.462 104 63 1 23 126 84 186 8.37e-23 99.8
MsaG007534 AT4G32730.1 38.462 104 63 1 23 126 84 186 1.04e-22 99.4
MsaG007534 AT4G37260.1 39.823 113 62 2 26 138 13 119 4.65e-22 95.1
MsaG007534 AT5G67300.1 33.974 156 94 3 23 178 3 149 8.74e-22 94.0
MsaG007534 AT2G39880.1 38.971 136 79 3 26 160 50 182 9.93e-22 94.7
MsaG007534 AT3G55730.1 40.566 106 62 1 26 131 56 160 2.51e-21 94.0
MsaG007534 AT3G09230.1 43.269 104 58 1 23 126 52 154 5.40e-21 93.2
MsaG007534 AT1G69560.1 40.000 105 62 1 26 130 107 210 5.69e-21 92.0
MsaG007534 AT1G17950.1 41.905 105 60 1 26 130 5 108 5.93e-21 90.5
MsaG007534 AT1G69560.2 40.000 105 62 1 26 130 123 226 6.44e-21 92.4
MsaG007534 AT3G29020.1 40.000 105 62 1 26 130 65 168 8.95e-21 89.7
MsaG007534 AT3G29020.2 40.000 105 62 1 26 130 67 170 1.16e-20 90.9
MsaG007534 AT1G26780.2 39.252 107 64 1 24 130 96 201 1.28e-20 91.7
MsaG007534 AT1G26780.1 42.424 99 56 1 24 122 96 193 1.70e-20 90.1
MsaG007534 AT5G17800.1 40.541 111 59 2 26 130 93 202 2.09e-20 90.5
MsaG007534 AT5G40360.1 36.364 110 68 2 24 132 156 264 5.60e-20 89.7
MsaG007534 AT1G22640.3 56.338 71 31 0 70 140 1 71 7.65e-20 86.3
MsaG007534 AT3G50060.1 37.736 106 65 1 23 128 3 107 8.06e-20 88.6
MsaG007534 AT1G73410.1 42.857 105 59 1 26 130 6 109 1.20e-19 87.0
MsaG007534 AT1G73410.2 42.857 105 59 1 26 130 6 109 2.11e-19 85.1
MsaG007534 AT2G25230.1 40.566 106 59 2 23 125 23 127 2.25e-19 85.9
MsaG007534 AT3G23250.2 35.537 121 74 1 70 190 1 117 2.94e-19 85.5
MsaG007534 AT1G66380.3 58.571 70 29 0 57 126 8 77 1.30e-18 80.5
MsaG007534 AT4G33450.1 38.679 106 64 1 25 130 18 122 1.60e-18 84.0
MsaG007534 AT5G39700.1 38.889 108 65 1 15 122 45 151 3.97e-18 81.6
MsaG007534 AT5G59780.1 66.667 51 17 0 82 132 1 51 4.26e-18 80.9
MsaG007534 AT3G46130.2 63.636 55 20 0 82 136 1 55 5.43e-18 81.3
MsaG007534 AT1G71030.1 39.000 100 60 1 48 147 5 103 1.82e-17 79.7
MsaG007534 AT1G14350.2 40.196 102 60 1 29 130 28 128 2.93e-17 82.4
MsaG007534 AT1G14350.1 40.196 102 60 1 29 130 28 128 2.93e-17 82.4
MsaG007534 AT2G37630.1 35.780 109 68 1 26 132 4 112 3.33e-17 82.0
MsaG007534 AT1G71030.2 42.353 85 49 0 63 147 5 89 3.37e-17 78.6
MsaG007534 AT5G14750.4 57.895 57 24 0 70 126 1 57 3.47e-17 77.4
MsaG007534 AT5G14750.2 57.895 57 24 0 70 126 1 57 3.47e-17 77.4
MsaG007534 AT1G66380.2 50.794 63 31 0 24 86 8 70 8.55e-17 75.5
MsaG007534 AT2G02820.2 33.333 162 93 4 15 166 17 173 1.10e-16 80.9
MsaG007534 AT4G00540.2 36.036 111 67 2 24 131 101 210 1.16e-16 80.5
MsaG007534 AT2G02820.1 33.333 162 93 4 15 166 17 173 1.25e-16 80.9
MsaG007534 AT4G00540.1 36.036 111 67 2 24 131 99 208 2.22e-16 80.1
MsaG007534 AT2G02820.3 31.220 205 109 6 15 189 17 219 2.81e-16 79.0
MsaG007534 AT1G18960.1 32.110 109 71 2 26 134 10 115 3.92e-16 78.2
MsaG007534 AT5G40430.1 36.792 106 62 3 23 125 51 154 3.82e-15 74.7
MsaG007534 AT4G25560.2 60.000 45 18 0 82 126 2 46 9.54e-13 67.0
MsaG007534 AT1G14350.3 44.444 63 35 0 68 130 23 85 6.41e-11 63.2
MsaG007534 AT1G14350.4 44.444 63 35 0 68 130 23 85 6.41e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTAAGTATTGTGCAATTT+TGG 0.168994 2:-19639164 None:intergenic
TGTTGGTAATAATCAGAATT+AGG 0.176139 2:-19639655 None:intergenic
TACCAACAAGCTCAGCAATT+TGG 0.199585 2:+19639670 MsaT007534.1:CDS
GGGACACATCTGACAATTTC+TGG 0.217259 2:+19639779 MsaT007534.1:CDS
ATCTCGTTGTCTGTTCTTCC+CGG 0.266163 2:-19639184 None:intergenic
ACAACGAGATCAAGAATTAT+TGG 0.314777 2:+19639197 MsaT007534.1:CDS
CCTTGAATCCAAGGAGTGTT+TGG 0.318256 2:-19639757 None:intergenic
ACCAACAAGCTCAGCAATTT+GGG 0.318446 2:+19639671 MsaT007534.1:CDS
GCTGCATCATCGGATTCATT+TGG 0.322005 2:+19639556 MsaT007534.1:CDS
GGTGGCTCGGGTGGCGGAGG+TGG 0.323196 2:-19639341 None:intergenic
TGGCGCCGCGGCTGCATCAT+CGG 0.345089 2:+19639546 MsaT007534.1:CDS
GTTGGTAATAATCAGAATTA+GGG 0.353037 2:-19639654 None:intergenic
ATCTGGATTGTTCCCTCAAA+TGG 0.353663 2:+19639717 MsaT007534.1:CDS
CCTTTGGATGCCAAGGTTAG+TGG 0.355811 2:+19639297 MsaT007534.1:CDS
TACGTCACATTTGAGTTGTT+TGG 0.355884 2:-19639242 None:intergenic
TTCATAGTCGTTGGGGAAAC+CGG 0.357053 2:+19638863 MsaT007534.1:CDS
CGAGCCACCGCCACTAATAA+TGG 0.357709 2:+19639355 MsaT007534.1:CDS
CAAAATTGCACAATACTTAC+CGG 0.367480 2:+19639165 MsaT007534.1:CDS
ATGTTACCACGACGAACATC+TGG 0.367650 2:-19638808 None:intergenic
GATTGCATCACTAGCCCATC+TGG 0.373109 2:+19639700 MsaT007534.1:CDS
CTGCATCATCGGATTCATTT+GGG 0.373323 2:+19639557 MsaT007534.1:CDS
GGCGGTGGCTCGGGTGGCGG+AGG 0.377228 2:-19639344 None:intergenic
TGTTGGTGTTCATAATTGTT+GGG 0.386240 2:-19639471 None:intergenic
AAGATGCCATGCGCTACCTT+TGG 0.397038 2:+19639281 MsaT007534.1:CDS
CATTATTAGTGGCGGTGGCT+CGG 0.400688 2:-19639354 None:intergenic
ACCCAAATTGCTGAGCTTGT+TGG 0.406996 2:-19639672 None:intergenic
CCAAGGAGTGTTTGGTTCCA+TGG 0.416961 2:-19639749 None:intergenic
CCAAACACTCCTTGGATTCA+AGG 0.418970 2:+19639757 MsaT007534.1:CDS
TTCTTGAACTTCATAGTCGT+TGG 0.421499 2:+19638854 MsaT007534.1:CDS
TCTTGAACTTCATAGTCGTT+GGG 0.421944 2:+19638855 MsaT007534.1:CDS
ATCAATTACATTGCAAATCA+TGG 0.428806 2:+19638101 MsaT007534.1:CDS
TCGGGTGGCGGAGGTGGATG+CGG 0.434916 2:-19639335 None:intergenic
CTGTTGGTGTTCATAATTGT+TGG 0.438499 2:-19639472 None:intergenic
AGTGGCGGTGGCTCGGGTGG+CGG 0.441443 2:-19639347 None:intergenic
ATTATTAGTGGCGGTGGCTC+GGG 0.451809 2:-19639353 None:intergenic
GTTATAGGACTCAAACGAAC+TGG 0.452310 2:+19638748 MsaT007534.1:intron
ATTTCAATATTTCATGGAAG+TGG 0.456263 2:+19637977 None:intergenic
TATTGTTGTTACTACCAACT+TGG 0.458463 2:-19639627 None:intergenic
CCATGGAACCAAACACTCCT+TGG 0.463876 2:+19639749 MsaT007534.1:CDS
TCTTGAGTCAATTCCGAGAC+AGG 0.470088 2:-19639592 None:intergenic
CGGAGGTGGATGCGGCAGCT+TGG 0.476078 2:-19639327 None:intergenic
TCAAATGGATTTCAGTTCCA+TGG 0.479194 2:+19639732 MsaT007534.1:CDS
ACTTGGTGAACCATTATTAG+TGG 0.482800 2:-19639365 None:intergenic
ATGAACACCAACAGCTTATG+TGG 0.484034 2:+19639481 MsaT007534.1:CDS
AACACTCTTGCTCGTTCAGC+TGG 0.485635 2:+19638137 MsaT007534.1:CDS
GACACAAGTTTCGCCTGTCT+CGG 0.486609 2:+19639579 MsaT007534.1:CDS
GCGCCATTGCTACTATTCTC+TGG 0.490228 2:-19639529 None:intergenic
TATGCTATATGTCGTATTGT+TGG 0.492593 2:-19639407 None:intergenic
ATGGAACTGAAATCCATTTG+AGG 0.515326 2:-19639730 None:intergenic
TGAACCATTATTAGTGGCGG+TGG 0.522243 2:-19639359 None:intergenic
CAAATCATGGTGAAGGTCGA+TGG 0.524948 2:+19638114 MsaT007534.1:CDS
GATCCAACTCATCATCACTT+TGG 0.528166 2:-19638037 None:intergenic
CTCATCATCACTTTGGAGCA+TGG 0.530302 2:-19638030 None:intergenic
TGGAACTGAAATCCATTTGA+GGG 0.531486 2:-19639729 None:intergenic
TGCGCTACCTTTGGATGCCA+AGG 0.532069 2:+19639290 MsaT007534.1:CDS
CAAACACTCCTTGGATTCAA+GGG 0.533991 2:+19639758 MsaT007534.1:CDS
AGATCTTCATCGACGGTCCA+TGG 0.536902 2:-19638071 None:intergenic
ATTAGTGGCGGTGGCTCGGG+TGG 0.538647 2:-19639350 None:intergenic
GATTATTACAATGTCCAAGT+TGG 0.548318 2:+19639613 MsaT007534.1:CDS
CTTGAACTTCATAGTCGTTG+GGG 0.553574 2:+19638856 MsaT007534.1:CDS
TACATTGCAAATCATGGTGA+AGG 0.554565 2:+19638107 MsaT007534.1:CDS
GATGTGTCCCCTTGAATCCA+AGG 0.564896 2:-19639766 None:intergenic
CAATATTTCATGGAAGTGGA+AGG 0.568241 2:+19637981 None:intergenic
GCTATATGTCGTATTGTTGG+TGG 0.574661 2:-19639404 None:intergenic
GTTGGTGTTCATAATTGTTG+GGG 0.577340 2:-19639470 None:intergenic
CCACTAACCTTGGCATCCAA+AGG 0.583224 2:-19639297 None:intergenic
GCTCCAAAGTGATGATGAGT+TGG 0.588477 2:+19638034 MsaT007534.1:CDS
TGGATGCGCTCCACTAACCT+TGG 0.601618 2:-19639307 None:intergenic
ACTAATAATGGTTCACCAAG+TGG 0.601663 2:+19639367 MsaT007534.1:CDS
ACTCCAGAGAATAGTAGCAA+TGG 0.604297 2:+19639526 MsaT007534.1:CDS
ATTTGAGGGAACAATCCAGA+TGG 0.604631 2:-19639715 None:intergenic
TGAATCCGATGATGCAGCCG+CGG 0.612957 2:-19639551 None:intergenic
TGGCATCCAAAGGTAGCGCA+TGG 0.621698 2:-19639287 None:intergenic
GTGACCGCTGTTGTACCACT+TGG 0.627383 2:-19639382 None:intergenic
AAAATTGCACAATACTTACC+GGG 0.631573 2:+19639166 MsaT007534.1:CDS
TGGATCTTCGAAGAGGACCA+TGG 0.638658 2:+19638054 MsaT007534.1:CDS
TTTGAGGGAACAATCCAGAT+GGG 0.640469 2:-19639714 None:intergenic
TGGTGAACCATTATTAGTGG+CGG 0.649612 2:-19639362 None:intergenic
GAGAGCAAGATCTTCATCGA+CGG 0.650210 2:-19638078 None:intergenic
AAACACTCCTTGGATTCAAG+GGG 0.650871 2:+19639759 MsaT007534.1:CDS
GAATAGTAGCAATGGCGCCG+CGG 0.659766 2:+19639534 MsaT007534.1:CDS
CTTCGTCCAGATGTTCGTCG+TGG 0.664020 2:+19638802 MsaT007534.1:CDS
GCAAGAGCTGTAGATTGAGA+TGG 0.670049 2:+19638770 MsaT007534.1:CDS
GATGAGTTGGATCTTCGAAG+AGG 0.682976 2:+19638047 MsaT007534.1:CDS
ATGTGAACCACATAAGCTGT+TGG 0.722200 2:-19639488 None:intergenic
TTCACCAAGTGGTACAACAG+CGG 0.730136 2:+19639378 MsaT007534.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 19637990 19639846 19637990 ID=MsaG007534
Chr2 mRNA 19637990 19639846 19637990 ID=MsaT007534.1;Parent=MsaG007534
Chr2 exon 19637990 19638158 19637990 ID=MsaT007534.1.exon1;Parent=MsaT007534.1
Chr2 CDS 19637990 19638158 19637990 ID=cds.MsaT007534.1;Parent=MsaT007534.1
Chr2 exon 19638755 19638884 19638755 ID=MsaT007534.1.exon2;Parent=MsaT007534.1
Chr2 CDS 19638755 19638884 19638755 ID=cds.MsaT007534.1;Parent=MsaT007534.1
Chr2 exon 19639159 19639846 19639159 ID=MsaT007534.1.exon3;Parent=MsaT007534.1
Chr2 CDS 19639159 19639846 19639159 ID=cds.MsaT007534.1;Parent=MsaT007534.1
Gene Sequence

>MsaT007534.1

ATGGAAGTGGAAGGAAGTGTAATAAGCAACTCGAACATCACCATGCTCCAAAGTGATGATGAGTTGGATCTTCGAAGAGGACCATGGACCGTCGATGAAGATCTTGCTCTCATCAATTACATTGCAAATCATGGTGAAGGTCGATGGAACACTCTTGCTCGTTCAGCTGGACTCAAACGAACTGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTTCGTCCAGATGTTCGTCGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTTGAACTTCATAGTCGTTGGGGAAACCGATGGTCCAAAATTGCACAATACTTACCGGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACCCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTAAACAGTAAGCAATTCAAAGATGCCATGCGCTACCTTTGGATGCCAAGGTTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCGCCACCCGAGCCACCGCCACTAATAATGGTTCACCAAGTGGTACAACAGCGGTCACCACCAACAATACGACATATAGCATAAACAACAATTTTGATGTTCATAGTAGCGCGAACATGTTAACCCCAACAATTATGAACACCAACAGCTTATGTGGTTCACATGTTACACAACGTTATACTCCAGAGAATAGTAGCAATGGCGCCGCGGCTGCATCATCGGATTCATTTGGGACACAAGTTTCGCCTGTCTCGGAATTGACTCAAGATTATTACAATGTCCAAGTTGGTAGTAACAACAATAATAACCCTAATTCTGATTATTACCAACAAGCTCAGCAATTTGGGTTTTTTGATTGCATCACTAGCCCATCTGGATTGTTCCCTCAAATGGATTTCAGTTCCATGGAACCAAACACTCCTTGGATTCAAGGGGACACATCTGACAATTTCTGGAATGTTGAAAACATGTTACTCTTTCAACATCTCAATGACATGTGA

Protein sequence

>MsaT007534.1

MEVEGSVISNSNITMLQSDDELDLRRGPWTVDEDLALINYIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSATRATATNNGSPSGTTAVTTNNTTYSINNNFDVHSSANMLTPTIMNTNSLCGSHVTQRYTPENSSNGAAAASSDSFGTQVSPVSELTQDYYNVQVGSNNNNNPNSDYYQQAQQFGFFDCITSPSGLFPQMDFSSMEPNTPWIQGDTSDNFWNVENMLLFQHLNDM*