AlfalfaGEDB | MsaG007569

M. sativa ssp. caerulea / MsaG007569

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007569	AFK35708.1	92.308	325	21	4	1	324	58	379	1.12e-164	474

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007569	sp\|O22900\|WRK23_ARATH	43.692	325	144	10	12	316	32	337	7.27e-56	187

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007569	tr\|I3S616\|I3S616_MEDTR	92.308	325	21	4	1	324	58	379	5.34e-165	474

TFs/TRs:

Gene ID	Type	Classification
MsaG007569	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000855	MsaG007569	0.810795	1.652943e-50	2.877993e-48
MsaG001479	MsaG007569	0.829709	7.943505e-55	2.279811e-52
MsaG004715	MsaG007569	0.817062	6.967266e-52	1.419535e-49
MsaG004858	MsaG007569	0.823370	2.537726e-53	6.106816e-51
MsaG004890	MsaG007569	0.835337	3.245187e-56	1.098016e-53
MsaG005680	MsaG007569	0.841344	9.329554e-58	3.799406e-55
MsaG005642	MsaG007569	0.804007	4.476274e-49	6.631994e-47
MsaG005958	MsaG007569	0.826169	5.593466e-54	1.453332e-51
MsaG005966	MsaG007569	0.822523	3.989327e-53	9.382410e-51
MsaG007569	MsaG008433	0.800778	2.056041e-48	2.829202e-46
MsaG007569	MsaG009346	0.806071	1.665059e-49	2.588284e-47
MsaG007569	MsaG010066	0.824173	1.649216e-53	4.055894e-51
MsaG007569	MsaG010394	0.804398	3.714787e-49	5.553774e-47
MsaG007569	MsaG011441	0.811090	1.427773e-50	2.503954e-48
MsaG007569	MsaG017058	0.814543	2.523321e-51	4.821818e-49
MsaG007569	MsaG017287	0.819497	1.969745e-52	4.274928e-50
MsaG007569	MsaG018218	0.827511	2.681941e-54	7.234135e-52
MsaG007569	MsaG019911	0.803127	6.801314e-49	9.873429e-47
MsaG007569	MsaG020020	0.821751	6.011240e-53	1.384838e-50
MsaG007569	MsaG020580	0.812874	5.856556e-51	1.073328e-48
MsaG007569	MsaG021043	0.811081	1.434129e-50	2.514561e-48
MsaG007569	MsaG021448	0.800604	2.230008e-48	3.056571e-46
MsaG007569	MsaG023719	0.839810	2.341933e-57	9.087927e-55
MsaG007569	MsaG024010	0.806682	1.238947e-49	1.953995e-47
MsaG007569	MsaG025969	0.815290	1.726286e-51	3.361625e-49
MsaG007569	MsaG026777	0.811693	1.057696e-50	1.882549e-48
MsaG007569	MsaG027881	0.804669	3.263779e-49	4.910149e-47
MsaG007569	MsaG028001	0.811700	1.053662e-50	1.875726e-48
MsaG007569	MsaG028234	0.809603	2.977740e-50	5.036667e-48
MsaG007569	MsaG029086	0.834923	4.121297e-56	1.377328e-53
MsaG007569	MsaG029188	0.816660	8.566733e-52	1.727341e-49
MsaG007569	MsaG029385	0.823296	2.640419e-53	6.341124e-51
MsaG007569	MsaG029324	0.816848	7.774775e-52	1.575301e-49
MsaG007569	MsaG034337	0.804446	3.631863e-49	5.435674e-47
MsaG007569	MsaG035057	0.811564	1.127591e-50	2.000653e-48
MsaG007569	MsaG035533	0.812777	6.148985e-51	1.124172e-48
MsaG007569	MsaG036109	0.824969	1.072958e-53	2.696756e-51
MsaG007569	MsaG038016	0.823479	2.394321e-53	5.778452e-51
MsaG007569	MsaG039489	0.838711	4.500040e-57	1.687293e-54
MsaG007569	MsaG043668	0.813766	3.738651e-51	7.006447e-49
MsaG007569	MsaG044663	0.813243	4.864760e-51	8.998100e-49
MsaG007569	MsaG045452	0.828638	1.440162e-54	4.009468e-52
MsaG007569	MsaG046367	0.809957	2.501842e-50	4.267922e-48
MsaG007569	MsaG014180	0.806065	1.669167e-49	2.594350e-47
MsaG007569	MsaG011676	0.823061	2.994152e-53	7.145059e-51
MsaG007569	MsaG012695	0.811823	9.911543e-51	1.769797e-48
MsaG007569	MsaG019142	0.808822	4.370206e-50	7.254127e-48
MsaG007569	MsaG030863	0.855931	8.778368e-62	5.865273e-59
MsaG007569	MsaG034730	0.844129	1.711357e-58	7.620786e-56
MsaG007569	MsaG033065	0.805948	1.766459e-49	2.737928e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007569	MtrunA17_Chr2g0294231	92.308	325	21	4	1	324	59	380	1.06e-168	474
MsaG007569	MtrunA17_Chr1g0194481	47.742	310	129	9	6	310	36	317	5.62e-68	215
MsaG007569	MtrunA17_Chr7g0270191	41.479	311	133	9	10	316	30	295	5.11e-54	178
MsaG007569	MtrunA17_Chr4g0068541	36.885	366	145	12	14	310	60	408	1.58e-46	162
MsaG007569	MtrunA17_Chr5g0418781	43.564	202	91	3	119	320	98	276	9.19e-45	154
MsaG007569	MtrunA17_Chr4g0051881	58.779	131	53	1	91	220	123	253	3.93e-41	146
MsaG007569	MtrunA17_Chr5g0443131	78.750	80	17	0	131	210	143	222	3.33e-40	143
MsaG007569	MtrunA17_Chr8g0335811	66.667	87	28	1	119	205	128	213	1.43e-33	123
MsaG007569	MtrunA17_Chr1g0150801	67.500	80	26	0	123	202	80	159	1.68e-33	121
MsaG007569	MtrunA17_Chr7g0224801	68.000	75	24	0	133	207	81	155	5.79e-32	117
MsaG007569	MtrunA17_Chr3g0129361	57.843	102	37	1	106	201	99	200	2.59e-31	117
MsaG007569	MtrunA17_Chr8g0383251	47.934	121	62	1	96	215	59	179	2.69e-31	116
MsaG007569	MtrunA17_Chr7g0218081	51.818	110	49	1	101	206	362	471	1.36e-30	120
MsaG007569	MtrunA17_Chr7g0218081	36.913	149	77	3	75	208	144	290	5.56e-19	87.4
MsaG007569	MtrunA17_Chr7g0248721	69.231	78	23	1	125	202	121	197	1.81e-30	115
MsaG007569	MtrunA17_Chr3g0129321	61.039	77	30	0	131	207	104	180	3.75e-30	113
MsaG007569	MtrunA17_Chr8g0383351	67.568	74	23	1	129	201	143	216	1.01e-29	113
MsaG007569	MtrunA17_Chr5g0445311	50.427	117	52	1	110	220	323	439	2.90e-29	117
MsaG007569	MtrunA17_Chr5g0445311	58.730	63	25	1	145	207	200	261	3.23e-16	79.3
MsaG007569	MtrunA17_Chr5g0418191	50.000	106	53	0	100	205	275	380	2.97e-29	116
MsaG007569	MtrunA17_Chr5g0418191	60.000	60	23	1	145	204	151	209	3.35e-16	79.0
MsaG007569	MtrunA17_Chr3g0101131	57.732	97	40	1	126	222	396	491	7.37e-29	116
MsaG007569	MtrunA17_Chr3g0101131	59.375	64	25	1	145	208	243	305	3.81e-17	82.0
MsaG007569	MtrunA17_Chr3g0079691	65.385	78	27	0	129	206	479	556	1.61e-28	115
MsaG007569	MtrunA17_Chr3g0079691	57.812	64	26	1	145	208	280	342	8.14e-18	84.3
MsaG007569	MtrunA17_Chr8g0386241	50.000	90	45	0	113	202	71	160	1.02e-27	106
MsaG007569	MtrunA17_Chr5g0432161	44.604	139	49	2	91	229	379	489	3.06e-27	112
MsaG007569	MtrunA17_Chr5g0432161	56.667	60	25	1	145	204	244	302	2.33e-15	76.6
MsaG007569	MtrunA17_Chr3g0106491	36.649	191	83	2	129	319	349	501	3.55e-27	111
MsaG007569	MtrunA17_Chr3g0106491	54.545	66	29	1	145	210	198	262	2.15e-16	79.7
MsaG007569	MtrunA17_Chr4g0042831	46.957	115	52	1	101	206	225	339	7.50e-27	108
MsaG007569	MtrunA17_Chr4g0042831	54.688	64	29	0	145	208	145	208	1.24e-17	82.8
MsaG007569	MtrunA17_Chr7g0249311	60.256	78	31	0	129	206	376	453	1.10e-26	110
MsaG007569	MtrunA17_Chr7g0249311	57.812	64	26	1	145	208	179	241	3.79e-17	82.4
MsaG007569	MtrunA17_Chr7g0249301	58.974	78	32	0	129	206	276	353	2.25e-26	107
MsaG007569	MtrunA17_Chr7g0249301	55.385	65	28	1	144	208	61	124	1.78e-16	79.3
MsaG007569	MtrunA17_Chr4g0004911	59.211	76	31	0	129	204	320	395	4.91e-26	107
MsaG007569	MtrunA17_Chr4g0004911	53.247	77	34	1	145	219	184	260	1.78e-21	94.7
MsaG007569	MtrunA17_Chr7g0243891	39.597	149	74	2	74	206	287	435	5.05e-26	108
MsaG007569	MtrunA17_Chr7g0243891	53.333	75	31	2	145	219	216	286	1.36e-16	80.5
MsaG007569	MtrunA17_Chr1g0188941	53.947	76	35	0	129	204	35	110	1.20e-24	96.3
MsaG007569	MtrunA17_Chr4g0075201	40.769	130	75	2	129	256	251	380	3.25e-24	102
MsaG007569	MtrunA17_Chr3g0099641	39.231	130	77	2	129	256	235	364	4.07e-24	102
MsaG007569	MtrunA17_Chr7g0263531	40.299	134	71	2	87	212	296	428	5.83e-24	101
MsaG007569	MtrunA17_Chr7g0263531	41.748	103	49	2	146	248	190	281	6.46e-17	80.9
MsaG007569	MtrunA17_Chr4g0074001	42.105	114	66	0	95	208	309	422	2.12e-23	100
MsaG007569	MtrunA17_Chr7g0238921	68.421	57	18	0	145	201	124	180	5.93e-23	97.1
MsaG007569	MtrunA17_Chr2g0333851	51.163	86	39	2	127	209	149	234	2.10e-22	95.5
MsaG007569	MtrunA17_Chr2g0288871	51.948	77	36	1	129	204	289	365	2.83e-22	97.4
MsaG007569	MtrunA17_Chr7g0270831	41.379	116	53	3	93	207	178	279	1.00e-21	95.1
MsaG007569	MtrunA17_Chr2g0322391	47.500	80	41	1	129	207	333	412	1.06e-21	95.9
MsaG007569	MtrunA17_Chr4g0051181	51.282	78	37	1	129	205	227	304	1.14e-21	95.1
MsaG007569	MtrunA17_Chr7g0216891	50.649	77	37	1	132	207	206	282	3.51e-21	94.0
MsaG007569	MtrunA17_Chr5g0447701	55.696	79	34	1	130	208	237	314	4.29e-21	92.8
MsaG007569	MtrunA17_Chr5g0447701	52.542	59	27	1	146	204	93	150	1.86e-12	67.4
MsaG007569	MtrunA17_Chr4g0001361	58.065	62	25	1	144	204	161	222	1.44e-20	90.5
MsaG007569	MtrunA17_Chr4g0060271	42.553	94	53	1	112	204	222	315	2.48e-20	91.7
MsaG007569	MtrunA17_Chr6g0485431	44.444	81	44	1	131	210	140	220	6.58e-20	89.0
MsaG007569	MtrunA17_Chr4g0025051	47.436	78	40	1	132	208	322	399	6.99e-20	90.5
MsaG007569	MtrunA17_Chr2g0302391	45.122	82	44	1	129	209	195	276	7.60e-20	89.7
MsaG007569	MtrunA17_Chr7g0270051	49.315	73	36	1	146	217	54	126	2.61e-19	85.9
MsaG007569	MtrunA17_Chr1g0147881	42.683	82	46	1	121	201	238	319	3.52e-19	86.7
MsaG007569	MtrunA17_Chr4g0025061	47.436	78	40	1	132	208	347	424	8.55e-19	87.0
MsaG007569	MtrunA17_Chr3g0136961	48.611	72	33	2	143	213	136	204	1.14e-18	84.7
MsaG007569	MtrunA17_Chr1g0150281	47.297	74	34	2	133	201	124	197	1.41e-18	84.3
MsaG007569	MtrunA17_Chr5g0401821	46.341	82	43	1	121	201	175	256	1.54e-18	84.0
MsaG007569	MtrunA17_Chr3g0139021	40.206	97	57	1	106	201	275	371	2.04e-18	85.1
MsaG007569	MtrunA17_Chr4g0053281	42.391	92	52	1	121	211	242	333	6.73e-18	83.2
MsaG007569	MtrunA17_Chr1g0189391	49.296	71	35	1	132	201	84	154	1.03e-17	82.4
MsaG007569	MtrunA17_Chr4g0071521	37.755	98	58	2	121	217	221	316	1.79e-17	81.6
MsaG007569	MtrunA17_Chr1g0150271	45.263	95	42	4	144	237	100	185	3.21e-17	80.1
MsaG007569	MtrunA17_Chr8g0348311	51.667	60	28	1	146	204	156	215	1.05e-16	79.7
MsaG007569	MtrunA17_Chr7g0228941	54.098	61	27	1	146	205	53	113	3.12e-16	73.9
MsaG007569	MtrunA17_Chr8g0387501	50.000	62	30	1	144	204	128	189	3.19e-16	77.4
MsaG007569	MtrunA17_Chr2g0293481	51.667	60	28	1	146	204	268	327	7.48e-16	78.2
MsaG007569	MtrunA17_Chr5g0447711	45.333	75	41	0	130	204	215	289	2.50e-15	75.5
MsaG007569	MtrunA17_Chr7g0248691	40.698	86	42	3	121	204	136	214	4.85e-15	74.7
MsaG007569	MtrunA17_Chr8g0379461	46.774	62	32	1	146	206	77	138	4.93e-15	73.6
MsaG007569	MtrunA17_Chr2g0289181	40.260	77	43	2	133	208	4	78	6.43e-15	73.2
MsaG007569	MtrunA17_Chr1g0184691	38.750	80	48	1	123	201	271	350	1.18e-14	73.9
MsaG007569	MtrunA17_Chr4g0024391	38.462	78	47	1	132	208	216	293	2.48e-14	73.6
MsaG007569	MtrunA17_Chr2g0284321	46.667	60	31	1	146	204	36	95	3.38e-14	70.5
MsaG007569	MtrunA17_Chr1g0202461	34.545	110	60	4	97	204	222	321	3.49e-14	72.8
MsaG007569	MtrunA17_Chr5g0432071	49.206	63	31	1	145	207	104	165	5.32e-14	70.1
MsaG007569	MtrunA17_Chr8g0387981	40.909	88	44	2	121	200	103	190	6.47e-14	71.6
MsaG007569	MtrunA17_Chr3g0126391	39.423	104	48	3	107	200	93	191	6.96e-14	71.6
MsaG007569	MtrunA17_Chr2g0319961	35.644	101	58	2	111	204	40	140	1.29e-13	69.7
MsaG007569	MtrunA17_Chr2g0315361	38.938	113	57	3	108	211	108	217	1.50e-13	70.1
MsaG007569	MtrunA17_Chr8g0347251	34.615	104	65	1	109	209	100	203	4.04e-13	69.3
MsaG007569	MtrunA17_Chr7g0275531	50.000	60	27	1	144	200	117	176	6.39e-13	68.6
MsaG007569	MtrunA17_Chr2g0315381	38.053	113	58	3	108	211	104	213	6.43e-13	68.2
MsaG007569	MtrunA17_Chr3g0128671	31.176	170	104	4	51	213	35	198	6.49e-12	65.5
MsaG007569	MtrunA17_Chr7g0244981	47.458	59	28	1	145	200	122	180	8.43e-12	64.7
MsaG007569	MtrunA17_Chr8g0334541	32.331	133	73	5	104	233	63	181	5.90e-11	62.4
MsaG007569	MtrunA17_Chr5g0402931	44.068	59	31	1	144	202	122	178	8.17e-11	60.1
MsaG007569	MtrunA17_Chr7g0244971	43.333	60	31	1	144	200	122	181	8.91e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007569	AT2G47260.1	43.692	325	144	10	12	316	32	337	7.39e-57	187
MsaG007569	AT5G49520.1	50.472	212	69	5	114	310	190	380	2.87e-50	172
MsaG007569	AT1G69310.4	70.874	103	30	0	118	220	120	222	9.77e-46	157
MsaG007569	AT1G69310.2	70.874	103	30	0	118	220	120	222	9.77e-46	157
MsaG007569	AT1G69310.1	70.874	103	30	0	118	220	120	222	9.77e-46	157
MsaG007569	AT4G18170.1	51.220	164	65	3	60	208	72	235	5.35e-45	156
MsaG007569	AT1G29860.1	47.115	208	80	4	105	310	94	273	1.80e-44	154
MsaG007569	AT1G69310.3	66.990	103	30	1	118	220	120	218	4.62e-40	142
MsaG007569	AT3G62340.1	42.132	197	81	5	123	310	96	268	1.84e-39	140
MsaG007569	AT5G46350.1	59.649	114	44	1	95	208	135	246	4.16e-38	138
MsaG007569	AT2G44745.1	63.830	94	33	1	118	210	118	211	3.35e-35	127
MsaG007569	AT4G39410.1	69.412	85	25	1	118	201	195	279	6.41e-34	126
MsaG007569	AT2G46130.1	60.440	91	36	0	126	216	11	101	1.45e-33	120
MsaG007569	AT5G13080.1	70.423	71	21	0	132	202	54	124	4.03e-32	117
MsaG007569	AT3G01970.1	63.095	84	28	1	132	215	52	132	1.44e-31	115
MsaG007569	AT1G13960.2	66.667	75	25	0	130	204	241	315	7.09e-30	117
MsaG007569	AT1G13960.2	57.812	64	26	1	145	208	76	138	1.42e-17	82.8
MsaG007569	AT2G03340.1	67.105	76	25	0	130	205	400	475	8.86e-30	119
MsaG007569	AT2G03340.1	61.667	60	22	1	145	204	250	308	3.59e-17	82.4
MsaG007569	AT1G13960.1	44.118	136	63	1	82	204	333	468	1.87e-29	118
MsaG007569	AT1G13960.1	57.812	64	26	1	145	208	229	291	1.67e-17	83.6
MsaG007569	AT5G41570.1	60.000	80	32	0	123	202	76	155	9.77e-29	109
MsaG007569	AT5G26170.1	65.278	72	25	0	132	203	100	171	1.61e-28	108
MsaG007569	AT1G64000.1	59.036	83	34	0	121	203	90	172	3.57e-28	108
MsaG007569	AT2G46130.2	56.044	91	36	1	126	216	11	97	3.87e-28	105
MsaG007569	AT2G38470.1	61.728	81	31	0	126	206	343	423	6.23e-28	114
MsaG007569	AT2G38470.1	56.667	60	25	1	145	204	184	242	9.23e-15	75.1
MsaG007569	AT3G01080.1	65.333	75	26	0	130	204	291	365	6.30e-28	112
MsaG007569	AT3G01080.1	57.812	64	26	1	145	208	167	229	2.88e-17	82.4
MsaG007569	AT3G01080.2	65.333	75	26	0	130	204	329	403	7.69e-28	113
MsaG007569	AT3G01080.2	57.812	64	26	1	145	208	205	267	3.26e-17	82.4
MsaG007569	AT5G07100.2	47.009	117	58	2	99	214	98	211	1.34e-27	107
MsaG007569	AT5G07100.2	50.000	64	32	0	145	208	24	87	2.11e-15	74.3
MsaG007569	AT5G07100.4	47.009	117	58	2	99	214	98	211	1.34e-27	107
MsaG007569	AT5G07100.4	50.000	64	32	0	145	208	24	87	2.11e-15	74.3
MsaG007569	AT5G07100.5	47.009	117	58	2	99	214	98	211	1.34e-27	107
MsaG007569	AT5G07100.5	50.000	64	32	0	145	208	24	87	2.11e-15	74.3
MsaG007569	AT5G07100.3	47.009	117	58	2	99	214	98	211	1.34e-27	107
MsaG007569	AT5G07100.3	50.000	64	32	0	145	208	24	87	2.11e-15	74.3
MsaG007569	AT5G64810.1	50.000	98	46	1	121	215	86	183	1.49e-27	107
MsaG007569	AT5G07100.1	47.273	110	55	1	99	208	191	297	3.03e-27	108
MsaG007569	AT5G07100.1	50.000	64	32	0	145	208	117	180	3.58e-15	75.5
MsaG007569	AT4G26640.5	49.107	112	54	1	98	206	155	266	3.50e-27	110
MsaG007569	AT4G26640.5	59.091	66	26	1	145	210	35	99	4.33e-17	81.6
MsaG007569	AT4G26640.6	49.107	112	54	1	98	206	155	266	3.50e-27	110
MsaG007569	AT4G26640.6	59.091	66	26	1	145	210	35	99	4.33e-17	81.6
MsaG007569	AT4G26640.4	49.107	112	54	1	98	206	155	266	3.50e-27	110
MsaG007569	AT4G26640.4	59.091	66	26	1	145	210	35	99	4.33e-17	81.6
MsaG007569	AT4G26640.3	49.107	112	54	1	98	206	155	266	3.50e-27	110
MsaG007569	AT4G26640.3	59.091	66	26	1	145	210	35	99	4.33e-17	81.6
MsaG007569	AT4G26440.1	49.057	106	50	1	105	206	328	433	5.78e-27	111
MsaG007569	AT4G26440.1	42.268	97	55	1	112	208	145	240	3.18e-16	79.7
MsaG007569	AT5G56270.1	62.821	78	29	0	129	206	471	548	6.83e-27	111
MsaG007569	AT5G56270.1	54.688	64	28	1	145	208	273	335	1.25e-15	78.2
MsaG007569	AT4G26640.7	49.107	112	54	1	98	206	291	402	7.78e-27	110
MsaG007569	AT4G26640.7	59.091	66	26	1	145	210	171	235	8.73e-17	81.3
MsaG007569	AT4G26640.1	49.107	112	54	1	98	206	259	370	8.46e-27	110
MsaG007569	AT4G26640.1	59.091	66	26	1	145	210	139	203	7.89e-17	81.3
MsaG007569	AT4G26640.2	49.107	112	54	1	98	206	331	442	1.03e-26	110
MsaG007569	AT4G26640.2	59.091	66	26	1	145	210	211	275	8.61e-17	81.3
MsaG007569	AT2G21900.1	42.478	113	54	2	97	206	66	170	3.27e-25	100
MsaG007569	AT2G30250.1	56.627	83	36	0	126	208	309	391	1.08e-24	103
MsaG007569	AT2G30250.1	50.633	79	35	3	145	222	166	241	1.35e-13	71.2
MsaG007569	AT2G04880.2	58.904	73	30	0	132	204	270	342	1.62e-24	103
MsaG007569	AT2G04880.2	55.738	61	26	1	144	204	110	169	9.68e-16	78.2
MsaG007569	AT2G04880.1	46.789	109	50	1	104	204	258	366	1.85e-24	103
MsaG007569	AT2G04880.1	55.738	61	26	1	144	204	110	169	1.02e-15	78.2
MsaG007569	AT1G55600.1	57.534	73	31	0	132	204	294	366	2.63e-23	100
MsaG007569	AT4G04450.2	51.948	77	36	1	129	204	182	258	1.47e-22	97.8
MsaG007569	AT1G80840.1	42.149	121	63	4	108	225	110	226	1.85e-22	95.9
MsaG007569	AT1G62300.1	41.221	131	74	3	129	256	296	426	2.86e-22	97.8
MsaG007569	AT4G04450.1	51.948	77	36	1	129	204	276	352	4.13e-22	97.1
MsaG007569	AT4G22070.4	51.948	77	36	1	129	204	281	357	5.28e-22	97.1
MsaG007569	AT4G22070.3	51.948	77	36	1	129	204	281	357	5.28e-22	97.1
MsaG007569	AT4G22070.2	51.948	77	36	1	129	204	281	357	5.28e-22	97.1
MsaG007569	AT4G22070.1	51.948	77	36	1	129	204	281	357	5.28e-22	97.1
MsaG007569	AT2G37260.3	46.392	97	46	2	105	201	235	325	1.02e-21	94.4
MsaG007569	AT2G37260.3	41.593	113	57	3	146	250	86	197	2.29e-16	79.3
MsaG007569	AT2G37260.2	48.039	102	43	3	100	201	232	323	1.03e-21	94.4
MsaG007569	AT2G37260.2	41.593	113	57	3	146	250	84	195	2.48e-16	79.0
MsaG007569	AT2G37260.1	46.392	97	46	2	105	201	315	405	1.34e-21	95.1
MsaG007569	AT2G37260.1	41.593	113	57	3	146	250	166	277	3.61e-16	79.3
MsaG007569	AT1G68150.1	50.000	78	38	1	129	205	219	296	5.70e-21	92.8
MsaG007569	AT1G18860.1	50.649	77	37	1	129	204	223	299	6.74e-21	93.6
MsaG007569	AT5G43290.1	64.912	57	20	0	145	201	114	170	2.09e-20	89.7
MsaG007569	AT4G01720.1	44.330	97	52	2	110	204	203	299	2.82e-20	91.7
MsaG007569	AT5G15130.2	45.238	84	45	1	125	207	165	248	4.76e-20	90.9
MsaG007569	AT5G15130.1	45.238	84	45	1	125	207	207	290	5.24e-20	90.9
MsaG007569	AT4G30935.1	45.977	87	40	1	119	205	312	391	3.10e-19	88.6
MsaG007569	AT4G30935.1	52.542	59	27	1	146	204	169	226	4.55e-11	63.9
MsaG007569	AT4G31800.2	49.383	81	34	2	144	223	110	184	5.13e-19	85.1
MsaG007569	AT4G31800.1	48.193	83	36	2	144	225	175	251	6.39e-19	85.9
MsaG007569	AT2G25000.2	53.846	65	29	1	144	207	102	166	8.49e-19	84.3
MsaG007569	AT2G25000.4	53.846	65	29	1	144	207	102	166	8.49e-19	84.3
MsaG007569	AT2G25000.3	53.846	65	29	1	144	207	124	188	1.27e-18	84.3
MsaG007569	AT2G25000.1	53.846	65	29	1	144	207	145	209	2.08e-18	84.0
MsaG007569	AT2G23320.1	46.341	82	43	1	121	201	216	297	2.43e-18	84.3
MsaG007569	AT1G29280.1	53.968	63	28	1	146	207	75	137	3.67e-18	83.2
MsaG007569	AT3G58710.2	29.808	208	113	5	137	324	62	256	5.43e-18	82.8
MsaG007569	AT2G30590.1	36.697	109	65	2	98	202	263	371	5.70e-18	84.3
MsaG007569	AT3G58710.1	29.808	208	113	5	137	324	63	257	5.96e-18	82.8
MsaG007569	AT4G31550.2	43.902	82	45	1	121	201	221	302	7.91e-18	83.2
MsaG007569	AT3G01080.3	57.812	64	26	1	145	208	205	267	1.97e-17	82.0
MsaG007569	AT5G52830.1	45.882	85	40	3	121	204	146	225	2.47e-17	82.0
MsaG007569	AT2G24570.1	43.902	82	45	1	121	201	219	300	3.58e-17	81.3
MsaG007569	AT4G24240.1	37.097	124	76	2	79	201	216	338	4.24e-17	81.3
MsaG007569	AT4G31550.1	42.683	82	46	1	121	201	222	303	4.84e-17	80.9
MsaG007569	AT5G45050.4	33.939	165	94	4	51	204	941	1101	1.09e-16	81.6
MsaG007569	AT5G45050.1	33.939	165	94	4	51	204	1080	1240	1.20e-16	81.6
MsaG007569	AT5G45050.2	33.939	165	94	4	51	204	1052	1212	1.24e-16	81.3
MsaG007569	AT3G04670.1	41.463	82	47	1	121	201	238	319	2.65e-16	79.0
MsaG007569	AT1G69810.2	44.872	78	41	2	129	204	129	206	3.86e-16	78.2
MsaG007569	AT1G69810.1	44.872	78	41	2	129	204	187	264	4.22e-16	79.0
MsaG007569	AT5G28650.1	40.244	82	48	1	121	201	238	319	4.50e-16	78.2
MsaG007569	AT1G30650.1	53.333	60	27	1	146	204	218	277	5.56e-16	78.6
MsaG007569	AT4G01250.1	50.000	60	29	1	146	204	129	188	1.05e-15	76.6
MsaG007569	AT2G34830.1	51.667	60	28	1	146	204	216	275	1.21e-15	77.8
MsaG007569	AT2G34830.2	51.667	60	28	1	146	204	225	284	1.32e-15	77.4
MsaG007569	AT5G45260.1	37.143	140	81	4	77	212	1141	1277	3.17e-15	77.0
MsaG007569	AT1G66600.1	33.582	134	83	3	73	200	28	161	4.07e-14	71.2
MsaG007569	AT4G12020.3	37.931	116	58	3	62	165	548	661	4.17e-14	73.9
MsaG007569	AT4G12020.3	48.387	62	31	1	143	204	466	526	1.88e-12	68.9
MsaG007569	AT4G12020.11	37.931	116	58	3	62	165	548	661	4.36e-14	73.6
MsaG007569	AT4G12020.11	48.387	62	31	1	143	204	466	526	2.81e-12	68.2
MsaG007569	AT4G12020.10	37.931	116	58	2	62	165	548	661	4.44e-14	73.9
MsaG007569	AT4G12020.10	48.387	62	31	1	143	204	466	526	1.92e-12	68.9
MsaG007569	AT4G12020.2	37.931	116	58	2	62	165	548	661	4.53e-14	73.6
MsaG007569	AT4G12020.2	48.387	62	31	1	143	204	466	526	2.05e-12	68.6
MsaG007569	AT4G12020.1	37.931	116	58	2	62	165	548	661	4.58e-14	73.6
MsaG007569	AT4G12020.1	48.387	62	31	1	143	204	466	526	2.05e-12	68.6
MsaG007569	AT4G12020.9	37.931	116	58	2	62	165	548	661	4.58e-14	73.6
MsaG007569	AT4G12020.9	48.387	62	31	1	143	204	466	526	2.05e-12	68.6
MsaG007569	AT4G12020.6	37.931	116	58	2	62	165	548	661	4.61e-14	73.6
MsaG007569	AT4G12020.6	48.387	62	31	1	143	204	466	526	1.99e-12	68.6
MsaG007569	AT4G12020.8	37.931	116	58	2	62	165	548	661	4.61e-14	73.6
MsaG007569	AT4G12020.8	48.387	62	31	1	143	204	466	526	1.99e-12	68.6
MsaG007569	AT4G12020.4	37.931	116	58	2	62	165	548	661	4.78e-14	73.6
MsaG007569	AT4G12020.4	48.387	62	31	1	143	204	466	526	2.06e-12	68.6
MsaG007569	AT4G12020.7	37.931	116	58	2	62	165	548	661	4.93e-14	73.6
MsaG007569	AT4G12020.7	48.387	62	31	1	143	204	466	526	2.05e-12	68.6
MsaG007569	AT4G12020.5	37.931	116	58	2	62	165	481	594	5.51e-14	73.6
MsaG007569	AT4G12020.5	48.387	62	31	1	143	204	399	459	2.23e-12	68.6
MsaG007569	AT1G66560.1	47.692	65	31	1	145	206	103	167	5.73e-14	70.9
MsaG007569	AT2G46400.1	40.000	100	54	2	104	200	66	162	1.22e-13	70.9
MsaG007569	AT4G23550.1	45.455	66	35	1	140	204	135	200	2.66e-13	69.7
MsaG007569	AT4G23810.1	46.479	71	35	1	145	212	158	228	2.76e-13	70.1
MsaG007569	AT4G11070.2	37.097	124	55	5	93	200	51	167	5.70e-13	68.6
MsaG007569	AT2G40740.1	30.556	144	71	5	120	234	144	287	5.76e-13	68.6
MsaG007569	AT2G40740.3	30.556	144	71	5	120	234	153	296	6.52e-13	68.6
MsaG007569	AT3G56400.1	35.354	99	61	1	105	200	80	178	7.01e-13	68.6
MsaG007569	AT4G11070.1	37.097	124	55	5	93	200	83	199	7.59e-13	68.6
MsaG007569	AT1G80590.1	46.154	65	32	1	146	207	86	150	1.52e-12	66.6
MsaG007569	AT5G24110.1	36.275	102	50	4	107	200	77	171	3.28e-12	66.6
MsaG007569	AT2G40750.1	49.153	59	27	1	145	200	152	210	8.13e-12	65.9
MsaG007569	AT1G66550.2	47.458	59	28	1	145	200	103	161	2.38e-11	63.5
MsaG007569	AT1G66550.1	47.458	59	28	1	145	200	108	166	2.66e-11	63.5

Find 67 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTGTCATGAAAGCAAATC+TGG	0.203637	2:+20075085	None:intergenic
GTGATTAATCATCGAGGTTT+TGG	0.214915	2:-20074448	MsaT007569.1:CDS
GAGGCTTTGTTAAGAGATAA+TGG	0.260189	2:-20074406	MsaT007569.1:CDS
TCCTAGTCTTGTCTTGATCT+TGG	0.274700	2:+20075611	None:intergenic
GGCTATAGGTGGCGTAAATA+TGG	0.275141	2:-20075038	MsaT007569.1:CDS
AGCTTCGGTGGTTCTGGTTC+GGG	0.278184	2:-20074640	MsaT007569.1:CDS
CCTACTAGCTTCGGTGGTTC+TGG	0.283106	2:-20074646	MsaT007569.1:CDS
ATCTTCTTCTTATGGTTTCA+TGG	0.294886	2:-20075908	MsaT007569.1:CDS
TTTACCTCTATGCTGTTCTA+AGG	0.320002	2:+20075669	None:intergenic
TTATGGTTTCATGGACTTGT+TGG	0.324974	2:-20075899	MsaT007569.1:CDS
TAGCTTCGGTGGTTCTGGTT+CGG	0.337530	2:-20074641	MsaT007569.1:CDS
TATGGTTTCATGGACTTGTT+GGG	0.360903	2:-20075898	MsaT007569.1:CDS
TATGTTAACACGTCGTCGTT+TGG	0.377143	2:-20074490	MsaT007569.1:CDS
TTCAATACCTCGGATGAATC+CGG	0.413732	2:+20075757	None:intergenic
AGGCTTTGTTAAGAGATAAT+GGG	0.416894	2:-20074405	MsaT007569.1:CDS
TGTTGTTGTTGATGTAATCA+TGG	0.426264	2:+20075872	None:intergenic
ATCTTCAGGGTTTGTTAATG+AGG	0.433650	2:-20074425	MsaT007569.1:CDS
GAAGAAATCGAACAAGAATT+CGG	0.447286	2:+20075721	None:intergenic
CCTTCTTCTAGTTATGTTGG+TGG	0.455639	2:-20074526	MsaT007569.1:CDS
ATGTGTATGTACCTGGGAAA+AGG	0.480385	2:+20074993	None:intergenic
AGTAATATTATTATTACTAG+TGG	0.482036	2:+20074567	None:intergenic
TGGTGAACGAAGCTGAGGTT+AGG	0.496568	2:+20074670	None:intergenic
AGTTATGTTGGTGGCTCTAG+TGG	0.497274	2:-20074517	MsaT007569.1:CDS
CCAGAACCACCGAAGCTAGT+AGG	0.499557	2:+20074646	None:intergenic
GTTAACACGTCGTCGTTTGG+TGG	0.511248	2:-20074487	MsaT007569.1:CDS
TTATTATTGTACAACAATGT+TGG	0.511800	2:+20074595	None:intergenic
AGGTTAGGACGTGACGTGGC+AGG	0.517051	2:+20074685	None:intergenic
GTTCACCAACCTACTAGCTT+CGG	0.517743	2:-20074655	MsaT007569.1:CDS
CCATCACACTCTTTCGTCAC+CGG	0.521634	2:-20075794	MsaT007569.1:CDS
CATTGTAGTCACTACTTACG+AGG	0.525554	2:-20074728	MsaT007569.1:CDS
TTTGTCATGAAAGCAAATCT+GGG	0.531240	2:+20075086	None:intergenic
GAAGTTGATCACTTAGATGA+TGG	0.532713	2:-20075059	MsaT007569.1:CDS
ATCACTTAGATGATGGCTAT+AGG	0.537567	2:-20075052	MsaT007569.1:CDS
GGACGTGACGTGGCAGGAGA+AGG	0.541957	2:+20074691	None:intergenic
CCACCAACATAACTAGAAGA+AGG	0.545159	2:+20074526	None:intergenic
TCAATACCTCGGATGAATCC+GGG	0.548808	2:+20075758	None:intergenic
ACCGGTGAGTTCTAACATCC+CGG	0.555255	2:-20075776	MsaT007569.1:CDS
GACTACAATGGAAGAATCAT+CGG	0.558566	2:+20074741	None:intergenic
TTCCTCGTCTAATGAAGCAA+CGG	0.560515	2:-20075701	MsaT007569.1:CDS
GTTGTTGTTGATGTAATCAT+GGG	0.562636	2:+20075873	None:intergenic
CACCAACATAACTAGAAGAA+GGG	0.564018	2:+20074527	None:intergenic
ACCAACATAACTAGAAGAAG+GGG	0.568208	2:+20074528	None:intergenic
GTTGTTGTCGTCGTGACGGT+GGG	0.572884	2:+20075823	None:intergenic
GAACAAGAATTCGGTGACAC+CGG	0.578343	2:+20075730	None:intergenic
CACCAACCTACTAGCTTCGG+TGG	0.587372	2:-20074652	MsaT007569.1:CDS
TGTTGTTGTTGTCGTCGTGA+CGG	0.589333	2:+20075819	None:intergenic
GTCACAAGAGGAAGATGGCA+TGG	0.590984	2:+20075936	None:intergenic
ACCAAGATCAAGACAAGACT+AGG	0.598850	2:-20075612	MsaT007569.1:CDS
TGTTGTTGTCGTCGTGACGG+TGG	0.605267	2:+20075822	None:intergenic
CGGTGACGAAAGAGTGTGAT+GGG	0.606679	2:+20075795	None:intergenic
TCCGGGATGTTAGAACTCAC+CGG	0.608361	2:+20075775	None:intergenic
CACCGGAGTGTTCAATACCT+CGG	0.611727	2:+20075747	None:intergenic
AACCACCGAAGCTAGTAGGT+TGG	0.624820	2:+20074650	None:intergenic
CGTTGTACAACGGCAAGTTG+CGG	0.640509	2:-20074790	MsaT007569.1:CDS
AACACCTTAGAACAGCATAG+AGG	0.642711	2:-20075673	MsaT007569.1:CDS
AACCGTTGCTTCATTAGACG+AGG	0.647141	2:+20075699	None:intergenic
CCGGTGACGAAAGAGTGTGA+TGG	0.655487	2:+20075794	None:intergenic
TAGGTTGGTGAACGAAGCTG+AGG	0.658773	2:+20074665	None:intergenic
GCTGAGGTTAGGACGTGACG+TGG	0.672540	2:+20074681	None:intergenic
TAACATCCCGGATTCATCCG+AGG	0.676510	2:-20075764	MsaT007569.1:CDS
ATCCGAGGTATTGAACACTC+CGG	0.680816	2:-20075749	MsaT007569.1:CDS
ACTTAGATGATGGCTATAGG+TGG	0.681297	2:-20075049	MsaT007569.1:CDS
CTCGTAAGTAGTGACTACAA+TGG	0.690641	2:+20074729	None:intergenic
ATTGTAGTCACTACTTACGA+GGG	0.714246	2:-20074727	MsaT007569.1:CDS
GAGCTACTATCGTTGTACAA+CGG	0.728393	2:-20074800	MsaT007569.1:CDS
GATCAAGTGATTAATCATCG+AGG	0.747447	2:-20074454	MsaT007569.1:CDS
CCAACATAACTAGAAGAAGG+GGG	0.750249	2:+20074529	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	20074342	20075956	20074342	ID=MsaG007569
Chr2	mRNA	20074342	20075956	20074342	ID=MsaT007569.1;Parent=MsaG007569
Chr2	exon	20074342	20074822	20074342	ID=MsaT007569.1.exon3;Parent=MsaT007569.1
Chr2	CDS	20074342	20074822	20074342	ID=cds.MsaT007569.1;Parent=MsaT007569.1
Chr2	exon	20075005	20075148	20075005	ID=MsaT007569.1.exon2;Parent=MsaT007569.1
Chr2	CDS	20075005	20075148	20075005	ID=cds.MsaT007569.1;Parent=MsaT007569.1
Chr2	exon	20075607	20075956	20075607	ID=MsaT007569.1.exon1;Parent=MsaT007569.1
Chr2	CDS	20075607	20075956	20075607	ID=cds.MsaT007569.1;Parent=MsaT007569.1

Gene Sequence

>MsaT007569.1

ATGCCATCTTCCTCTTGTGACCAAAAATCTTCTTCTTATGGTTTCATGGACTTGTTGGGTTCCCATGATTACATCAACAACAACAACACTTTTTTATTATCGGATTGGGTTCCCACCGTCACGACGACAACAACAACAACCCATCACACTCTTTCGTCACCGGTGAGTTCTAACATCCCGGATTCATCCGAGGTATTGAACACTCCGGTGTCACCGAATTCTTGTTCGATTTCTTCCTCGTCTAATGAAGCAACGGTTAACAACACCTTAGAACAGCATAGAGGTAAACTTTCAAAAAATGAAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAGGAAACAATTGAAACCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCACTTAGATGATGGCTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCCATTGTAGTCACTACTTACGAGGGTCAACATACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTCGTTCACCAACCTACTAGCTTCGGTGGTTCTGGTTCGGGTTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATAATAACAACTCCACTAGTAATAATAATATTACTACTACTGCTACTACACCCCCTTCTTCTAGTTATGTTGGTGGCTCTAGTGGTAGTTATGTTAACACGTCGTCGTTTGGTGGTTTTGTGAATGATCAAGTGATTAATCATCGAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAACAAGAAAAAGATTCAAGAAAAGAACAACATTAA

Protein sequence

>MsaT007569.1

MPSSSCDQKSSSYGFMDLLGSHDYINNNNTFLLSDWVPTVTTTTTTTHHTLSSPVSSNIPDSSEVLNTPVSPNSCSISSSSNEATVNNTLEQHRGKLSKNEAELEGDDQDQDKTRKQLKPKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSFVHQPTSFGGSGSGSHSHFLLPTLLYNNNNSTSNNNITTTATTPPSSSYVGGSSGSYVNTSSFGGFVNDQVINHRGFGSSGFVNEALLRDNGLLQDIIQMKKQEKDSRKEQH*