Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007593 | XP_003594755.1 | 87.148 | 568 | 50 | 6 | 1 | 561 | 35 | 586 | 0.0 | 982 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007593 | sp|Q8GXW1|RGL2_ARATH | 31.807 | 393 | 249 | 7 | 171 | 560 | 170 | 546 | 9.84e-59 | 207 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007593 | tr|A2Q2X9|A2Q2X9_MEDTR | 87.148 | 568 | 50 | 6 | 1 | 561 | 35 | 586 | 0.0 | 982 |
Gene ID | Type | Classification |
---|---|---|
MsaG007593 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007593 | MtrunA17_Chr2g0294461 | 83.803 | 568 | 70 | 5 | 1 | 561 | 35 | 587 | 0.0 | 953 |
MsaG007593 | MtrunA17_Chr2g0294471 | 80.282 | 568 | 98 | 6 | 2 | 561 | 17 | 578 | 0.0 | 909 |
MsaG007593 | MtrunA17_Chr7g0270031 | 44.400 | 500 | 243 | 8 | 68 | 561 | 86 | 556 | 6.55e-137 | 409 |
MsaG007593 | MtrunA17_Chr1g0194621 | 44.142 | 478 | 239 | 8 | 90 | 561 | 65 | 520 | 1.16e-127 | 384 |
MsaG007593 | MtrunA17_Chr8g0376381 | 30.769 | 390 | 244 | 6 | 173 | 560 | 158 | 523 | 1.78e-53 | 190 |
MsaG007593 | MtrunA17_Chr3g0110971 | 28.465 | 404 | 254 | 6 | 171 | 560 | 206 | 588 | 1.43e-52 | 189 |
MsaG007593 | MtrunA17_Chr7g0224271 | 30.296 | 406 | 249 | 10 | 170 | 559 | 286 | 673 | 1.96e-48 | 178 |
MsaG007593 | MtrunA17_Chr2g0306641 | 28.426 | 394 | 253 | 9 | 174 | 559 | 115 | 487 | 9.25e-44 | 162 |
MsaG007593 | MtrunA17_Chr8g0357601 | 29.337 | 392 | 254 | 9 | 177 | 559 | 175 | 552 | 2.26e-43 | 162 |
MsaG007593 | MtrunA17_Chr4g0057891 | 29.156 | 391 | 257 | 10 | 177 | 559 | 142 | 520 | 3.02e-43 | 161 |
MsaG007593 | MtrunA17_Chr4g0031711 | 28.608 | 395 | 259 | 8 | 174 | 558 | 351 | 732 | 5.85e-42 | 160 |
MsaG007593 | MtrunA17_Chr4g0031741 | 28.974 | 390 | 248 | 11 | 179 | 558 | 279 | 649 | 9.49e-40 | 153 |
MsaG007593 | MtrunA17_Chr4g0038761 | 30.319 | 376 | 237 | 9 | 188 | 559 | 88 | 442 | 1.06e-39 | 150 |
MsaG007593 | MtrunA17_Chr4g0038851 | 26.749 | 486 | 268 | 11 | 145 | 559 | 1 | 469 | 1.26e-39 | 150 |
MsaG007593 | MtrunA17_Chr7g0245601 | 30.423 | 378 | 230 | 10 | 188 | 559 | 442 | 792 | 8.98e-39 | 152 |
MsaG007593 | MtrunA17_Chr7g0238891 | 28.061 | 392 | 261 | 8 | 175 | 559 | 363 | 740 | 2.12e-37 | 147 |
MsaG007593 | MtrunA17_Chr2g0328431 | 28.792 | 389 | 249 | 8 | 179 | 558 | 284 | 653 | 3.85e-37 | 146 |
MsaG007593 | MtrunA17_Chr4g0031721 | 26.329 | 395 | 254 | 7 | 179 | 558 | 311 | 683 | 2.96e-36 | 143 |
MsaG007593 | MtrunA17_Chr4g0057291 | 27.720 | 386 | 258 | 10 | 181 | 558 | 289 | 661 | 8.59e-36 | 142 |
MsaG007593 | MtrunA17_Chr2g0328411 | 27.649 | 387 | 256 | 7 | 179 | 558 | 284 | 653 | 1.08e-35 | 142 |
MsaG007593 | MtrunA17_Chr1g0183641 | 27.451 | 408 | 264 | 11 | 154 | 558 | 98 | 476 | 1.17e-35 | 139 |
MsaG007593 | MtrunA17_Chr4g0031701 | 25.907 | 386 | 265 | 7 | 173 | 549 | 243 | 616 | 1.26e-35 | 141 |
MsaG007593 | MtrunA17_Chr4g0031731 | 25.907 | 386 | 265 | 7 | 173 | 549 | 243 | 616 | 2.22e-34 | 137 |
MsaG007593 | MtrunA17_Chr2g0290241 | 25.581 | 387 | 269 | 8 | 179 | 559 | 52 | 425 | 6.52e-34 | 133 |
MsaG007593 | MtrunA17_Chr4g0076091 | 24.870 | 386 | 271 | 7 | 179 | 558 | 170 | 542 | 1.25e-33 | 134 |
MsaG007593 | MtrunA17_Chr4g0039661 | 25.781 | 384 | 262 | 8 | 181 | 559 | 190 | 555 | 1.44e-33 | 134 |
MsaG007593 | MtrunA17_Chr2g0328391 | 25.313 | 399 | 263 | 8 | 175 | 558 | 290 | 668 | 1.96e-33 | 135 |
MsaG007593 | MtrunA17_Chr5g0445331 | 25.707 | 389 | 265 | 7 | 181 | 559 | 158 | 532 | 2.60e-33 | 133 |
MsaG007593 | MtrunA17_Chr3g0085681 | 27.273 | 429 | 242 | 8 | 185 | 560 | 26 | 437 | 2.51e-32 | 129 |
MsaG007593 | MtrunA17_Chr3g0114841 | 26.980 | 404 | 262 | 13 | 174 | 558 | 110 | 499 | 3.77e-31 | 127 |
MsaG007593 | MtrunA17_Chr3g0101141 | 25.258 | 388 | 264 | 8 | 181 | 559 | 172 | 542 | 1.17e-30 | 125 |
MsaG007593 | MtrunA17_Chr5g0447691 | 25.740 | 338 | 229 | 7 | 185 | 514 | 178 | 501 | 1.28e-30 | 125 |
MsaG007593 | MtrunA17_Chr2g0328401 | 26.786 | 336 | 223 | 6 | 179 | 507 | 285 | 604 | 1.76e-30 | 126 |
MsaG007593 | MtrunA17_Chr2g0328341 | 22.938 | 388 | 280 | 6 | 176 | 558 | 264 | 637 | 1.85e-30 | 126 |
MsaG007593 | MtrunA17_Chr2g0319091 | 24.568 | 521 | 339 | 15 | 75 | 558 | 75 | 578 | 2.53e-30 | 125 |
MsaG007593 | MtrunA17_Chr2g0328381 | 23.148 | 432 | 304 | 9 | 136 | 558 | 228 | 640 | 5.23e-30 | 124 |
MsaG007593 | MtrunA17_Chr1g0159461 | 25.450 | 389 | 254 | 9 | 185 | 559 | 226 | 592 | 1.29e-28 | 120 |
MsaG007593 | MtrunA17_Chr3g0125811 | 27.204 | 397 | 237 | 12 | 185 | 559 | 204 | 570 | 1.39e-28 | 120 |
MsaG007593 | MtrunA17_Chr5g0424131 | 26.150 | 413 | 266 | 12 | 169 | 558 | 102 | 498 | 5.99e-28 | 117 |
MsaG007593 | MtrunA17_Chr1g0200401 | 24.762 | 420 | 266 | 12 | 169 | 561 | 65 | 461 | 7.87e-27 | 113 |
MsaG007593 | MtrunA17_Chr8g0383981 | 27.182 | 401 | 248 | 15 | 171 | 558 | 126 | 495 | 2.16e-24 | 106 |
MsaG007593 | MtrunA17_Chr2g0328361 | 22.843 | 394 | 248 | 8 | 176 | 558 | 266 | 614 | 1.61e-23 | 104 |
MsaG007593 | MtrunA17_Chr3g0085361 | 25.581 | 344 | 194 | 7 | 270 | 560 | 17 | 351 | 1.58e-22 | 99.4 |
MsaG007593 | MtrunA17_Chr7g0236851 | 25.964 | 389 | 250 | 11 | 183 | 558 | 293 | 656 | 1.45e-21 | 99.0 |
MsaG007593 | MtrunA17_Chr5g0396491 | 32.237 | 152 | 102 | 1 | 408 | 559 | 328 | 478 | 7.63e-21 | 95.9 |
MsaG007593 | MtrunA17_Chr5g0396491 | 27.755 | 245 | 161 | 6 | 163 | 407 | 36 | 264 | 9.64e-21 | 95.5 |
MsaG007593 | MtrunA17_Chr5g0401131 | 24.031 | 387 | 271 | 9 | 185 | 559 | 115 | 490 | 1.69e-20 | 94.7 |
MsaG007593 | MtrunA17_Chr7g0230731 | 24.485 | 388 | 258 | 9 | 180 | 559 | 368 | 728 | 1.05e-19 | 93.2 |
MsaG007593 | MtrunA17_Chr4g0012071 | 25.455 | 385 | 257 | 11 | 180 | 559 | 192 | 551 | 1.09e-19 | 92.8 |
MsaG007593 | MtrunA17_Chr2g0328371 | 24.138 | 232 | 166 | 5 | 275 | 501 | 13 | 239 | 1.66e-19 | 88.2 |
MsaG007593 | MtrunA17_Chr6g0468561 | 29.856 | 278 | 161 | 10 | 300 | 559 | 401 | 662 | 6.34e-19 | 90.5 |
MsaG007593 | MtrunA17_Chr2g0329591 | 24.221 | 289 | 204 | 6 | 185 | 470 | 75 | 351 | 7.17e-19 | 89.4 |
MsaG007593 | MtrunA17_Chr7g0230771 | 23.454 | 388 | 262 | 10 | 180 | 559 | 371 | 731 | 2.66e-17 | 85.5 |
MsaG007593 | MtrunA17_Chr8g0373561 | 25.424 | 354 | 232 | 13 | 182 | 526 | 180 | 510 | 4.87e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007593 | AT3G03450.1 | 31.807 | 393 | 249 | 7 | 171 | 560 | 170 | 546 | 1.00e-59 | 207 |
MsaG007593 | AT5G17490.1 | 30.334 | 389 | 246 | 8 | 175 | 560 | 151 | 517 | 3.67e-54 | 192 |
MsaG007593 | AT2G01570.1 | 29.949 | 394 | 250 | 7 | 171 | 560 | 211 | 582 | 6.34e-54 | 192 |
MsaG007593 | AT1G14920.1 | 29.771 | 393 | 252 | 7 | 171 | 560 | 159 | 530 | 2.40e-51 | 184 |
MsaG007593 | AT1G66350.1 | 29.049 | 389 | 250 | 5 | 173 | 560 | 144 | 507 | 2.55e-51 | 184 |
MsaG007593 | AT5G41920.1 | 30.886 | 395 | 243 | 11 | 171 | 559 | 30 | 400 | 1.71e-45 | 166 |
MsaG007593 | AT5G59450.1 | 30.334 | 389 | 251 | 9 | 179 | 559 | 222 | 598 | 2.03e-42 | 161 |
MsaG007593 | AT3G46600.2 | 29.659 | 381 | 248 | 8 | 185 | 559 | 5 | 371 | 1.64e-41 | 154 |
MsaG007593 | AT1G07530.1 | 28.680 | 394 | 261 | 6 | 172 | 558 | 384 | 764 | 3.33e-41 | 159 |
MsaG007593 | AT3G46600.1 | 29.306 | 389 | 255 | 8 | 177 | 559 | 205 | 579 | 4.06e-41 | 157 |
MsaG007593 | AT3G46600.3 | 29.306 | 389 | 255 | 8 | 177 | 559 | 173 | 547 | 1.45e-40 | 155 |
MsaG007593 | AT3G54220.1 | 30.458 | 371 | 240 | 8 | 188 | 558 | 297 | 649 | 8.75e-40 | 154 |
MsaG007593 | AT1G55580.1 | 28.319 | 452 | 280 | 10 | 143 | 559 | 3 | 445 | 1.52e-38 | 147 |
MsaG007593 | AT1G50420.1 | 25.910 | 467 | 261 | 13 | 158 | 559 | 33 | 479 | 8.69e-38 | 146 |
MsaG007593 | AT2G29060.2 | 28.205 | 390 | 262 | 7 | 176 | 558 | 276 | 654 | 4.96e-37 | 146 |
MsaG007593 | AT2G29060.1 | 28.205 | 390 | 262 | 7 | 176 | 558 | 313 | 691 | 5.87e-37 | 146 |
MsaG007593 | AT2G29065.1 | 24.869 | 382 | 272 | 6 | 185 | 558 | 253 | 627 | 7.26e-37 | 145 |
MsaG007593 | AT2G37650.2 | 29.188 | 394 | 252 | 10 | 175 | 559 | 326 | 701 | 1.74e-35 | 142 |
MsaG007593 | AT2G37650.1 | 29.188 | 394 | 252 | 10 | 175 | 559 | 338 | 713 | 2.25e-35 | 141 |
MsaG007593 | AT4G17230.1 | 25.130 | 386 | 267 | 7 | 181 | 559 | 155 | 525 | 1.02e-34 | 138 |
MsaG007593 | AT4G17230.2 | 25.130 | 386 | 267 | 7 | 181 | 559 | 155 | 525 | 1.02e-34 | 138 |
MsaG007593 | AT1G07520.2 | 24.433 | 397 | 284 | 7 | 170 | 558 | 140 | 528 | 4.21e-34 | 136 |
MsaG007593 | AT1G07520.4 | 24.433 | 397 | 284 | 7 | 170 | 558 | 140 | 528 | 4.21e-34 | 136 |
MsaG007593 | AT1G07520.1 | 24.433 | 397 | 284 | 7 | 170 | 558 | 304 | 692 | 5.58e-34 | 137 |
MsaG007593 | AT1G07520.3 | 24.433 | 397 | 284 | 7 | 170 | 558 | 305 | 693 | 6.26e-34 | 137 |
MsaG007593 | AT1G63100.2 | 25.063 | 399 | 269 | 8 | 176 | 558 | 269 | 653 | 9.13e-34 | 136 |
MsaG007593 | AT5G66770.1 | 26.448 | 397 | 267 | 10 | 172 | 559 | 204 | 584 | 1.00e-33 | 135 |
MsaG007593 | AT1G63100.1 | 25.063 | 399 | 269 | 8 | 176 | 558 | 244 | 628 | 1.09e-33 | 136 |
MsaG007593 | AT3G50650.1 | 26.923 | 364 | 242 | 8 | 204 | 559 | 195 | 542 | 1.45e-31 | 129 |
MsaG007593 | AT2G04890.1 | 25.258 | 388 | 265 | 8 | 176 | 559 | 47 | 413 | 2.20e-30 | 123 |
MsaG007593 | AT5G48150.1 | 24.926 | 337 | 229 | 7 | 181 | 509 | 119 | 439 | 4.25e-30 | 124 |
MsaG007593 | AT5G48150.4 | 24.926 | 337 | 229 | 7 | 181 | 509 | 119 | 439 | 4.25e-30 | 124 |
MsaG007593 | AT5G48150.2 | 24.926 | 337 | 229 | 7 | 181 | 509 | 119 | 439 | 4.25e-30 | 124 |
MsaG007593 | AT5G48150.3 | 24.926 | 337 | 229 | 7 | 181 | 509 | 119 | 439 | 4.25e-30 | 124 |
MsaG007593 | AT1G50600.3 | 24.211 | 380 | 270 | 6 | 185 | 559 | 160 | 526 | 3.68e-28 | 119 |
MsaG007593 | AT1G50600.1 | 24.211 | 380 | 270 | 6 | 185 | 559 | 231 | 597 | 8.01e-28 | 118 |
MsaG007593 | AT1G50600.2 | 24.211 | 380 | 270 | 6 | 185 | 559 | 235 | 601 | 1.17e-27 | 117 |
MsaG007593 | AT4G08250.1 | 25.366 | 410 | 269 | 13 | 165 | 558 | 88 | 476 | 2.10e-24 | 107 |
MsaG007593 | AT1G21450.1 | 24.556 | 338 | 237 | 7 | 185 | 516 | 226 | 551 | 4.22e-21 | 97.8 |
MsaG007593 | AT2G45160.1 | 24.051 | 395 | 261 | 11 | 181 | 559 | 268 | 639 | 2.91e-20 | 95.1 |
MsaG007593 | AT4G37650.1 | 22.302 | 417 | 294 | 11 | 159 | 559 | 127 | 529 | 2.61e-19 | 91.7 |
MsaG007593 | AT3G60630.1 | 25.246 | 305 | 206 | 9 | 266 | 559 | 329 | 622 | 2.18e-17 | 86.3 |
MsaG007593 | AT3G49950.1 | 24.937 | 397 | 255 | 13 | 185 | 558 | 31 | 407 | 3.07e-17 | 84.7 |
MsaG007593 | AT4G00150.1 | 25.063 | 399 | 234 | 14 | 179 | 559 | 203 | 554 | 3.62e-17 | 85.1 |
MsaG007593 | AT4G36710.1 | 22.749 | 422 | 285 | 14 | 153 | 560 | 92 | 486 | 8.45e-16 | 80.5 |
MsaG007593 | AT3G13840.1 | 26.027 | 292 | 191 | 9 | 173 | 454 | 137 | 413 | 7.03e-13 | 71.6 |
Find 71 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCATCCAGTTAATGATTT+TGG | 0.114608 | 2:-20366574 | MsaT007593.1:CDS |
AACCATTACTATAGGGTTTA+TGG | 0.150240 | 2:+20365664 | None:intergenic |
TAATGAACCACGCGCTTAAC+TGG | 0.226146 | 2:+20366265 | None:intergenic |
GAGTCTCTTTGCTCTAATTT+TGG | 0.258364 | 2:-20366859 | MsaT007593.1:CDS |
CTTGATATGATCCTTGTTCT+TGG | 0.265549 | 2:+20366785 | None:intergenic |
CAAACAGAAACAGAGTTAAT+TGG | 0.268686 | 2:+20365263 | None:intergenic |
GTTCTTGGTGATGATACTTT+AGG | 0.270808 | 2:+20366800 | None:intergenic |
TTGATTCCTAATCACCCTTT+TGG | 0.281331 | 2:-20366442 | MsaT007593.1:CDS |
CTACTGGTGCTAAAGGAATT+TGG | 0.313681 | 2:+20366656 | None:intergenic |
CAATTAACTCTGTTTCTGTT+TGG | 0.337936 | 2:-20365262 | MsaT007593.1:CDS |
TCGATTGAAGTGCTTGCATT+AGG | 0.355406 | 2:+20365975 | None:intergenic |
AAGGAATTTGGTAGAATTGT+TGG | 0.356422 | 2:+20366668 | None:intergenic |
CCGTGACAACCATTACTATA+GGG | 0.362305 | 2:+20365657 | None:intergenic |
ATCAAACCAAAATCATTAAC+TGG | 0.365703 | 2:+20366568 | None:intergenic |
ACCTCTTGAGGATCAAATAA+AGG | 0.376827 | 2:+20366160 | None:intergenic |
AATGGTCATTGTCTTCTTGT+TGG | 0.397166 | 2:-20365299 | MsaT007593.1:CDS |
GTAGATATATTGAAGAACTA+TGG | 0.423065 | 2:-20366637 | MsaT007593.1:CDS |
GATTCTTTGTTGAAGAGCTT+CGG | 0.433882 | 2:+20366237 | None:intergenic |
GTCTTTGTATCAAGCTGAAT+TGG | 0.435480 | 2:-20365366 | MsaT007593.1:CDS |
TCTTCGTCGCAATCTGCATC+AGG | 0.438613 | 2:-20366466 | MsaT007593.1:CDS |
GACAAACAATATGCAAAAGA+TGG | 0.445280 | 2:-20366185 | MsaT007593.1:CDS |
CTCTCATGATTGTTTCAAGT+TGG | 0.456214 | 2:+20365696 | None:intergenic |
CAAAGAATCGACAAAGAAAC+GGG | 0.460522 | 2:-20366223 | MsaT007593.1:CDS |
AGGAAATCATCTTCTTCTGA+TGG | 0.462485 | 2:+20366820 | None:intergenic |
GTTATCTTTAGAAGCTCAAC+GGG | 0.463236 | 2:+20365941 | None:intergenic |
AGGAATATTGTGGCTGAAGA+AGG | 0.463268 | 2:-20365479 | MsaT007593.1:CDS |
TGACACTGGTAAAAGTTTGA+AGG | 0.468544 | 2:-20365873 | MsaT007593.1:CDS |
CAAAATCATTAACTGGATGA+AGG | 0.470878 | 2:+20366575 | None:intergenic |
GAAGATATCATGAAGATAGC+TGG | 0.473521 | 2:-20366511 | MsaT007593.1:CDS |
TCCGTGACAACCATTACTAT+AGG | 0.473792 | 2:+20365656 | None:intergenic |
ATTGATCTCGAAATCCGAAA+AGG | 0.475010 | 2:-20366013 | MsaT007593.1:CDS |
ACAAAGAATCGACAAAGAAA+CGG | 0.477156 | 2:-20366224 | MsaT007593.1:CDS |
TGTCTTCTTGTTGGATGGAA+GGG | 0.477569 | 2:-20365290 | MsaT007593.1:CDS |
AATATATCTACTGGTGCTAA+AGG | 0.478512 | 2:+20366649 | None:intergenic |
ATTCGATACAATTATTGTAT+CGG | 0.478748 | 2:-20365819 | MsaT007593.1:CDS |
TTAGCTTGTGCTGAGAAAGT+TGG | 0.481539 | 2:-20366358 | MsaT007593.1:CDS |
TCTTGCACATTTGATATGAA+TGG | 0.485082 | 2:-20365317 | MsaT007593.1:CDS |
TAGTTCTTCAATATATCTAC+TGG | 0.487136 | 2:+20366640 | None:intergenic |
AAGATAACGGCTATTGTGAC+TGG | 0.492320 | 2:-20365926 | MsaT007593.1:CDS |
TTGTCTTCTTGTTGGATGGA+AGG | 0.499303 | 2:-20365291 | MsaT007593.1:CDS |
AGATCCTTGGTAACCTCTTG+AGG | 0.502534 | 2:+20366148 | None:intergenic |
CCCTATAGTAATGGTTGTCA+CGG | 0.506352 | 2:-20365657 | MsaT007593.1:CDS |
GTCATTGTCTTCTTGTTGGA+TGG | 0.509549 | 2:-20365295 | MsaT007593.1:CDS |
GAGTCTTTATCTTCGAAGAC+AGG | 0.510353 | 2:-20366292 | MsaT007593.1:CDS |
CGTTGAGCTTCTAAAGATAA+CGG | 0.513584 | 2:-20365939 | MsaT007593.1:CDS |
TTGATCTCGAAATCCGAAAA+GGG | 0.522982 | 2:-20366012 | MsaT007593.1:CDS |
AAGGGCTGGATTTAGATCCT+TGG | 0.529849 | 2:+20366135 | None:intergenic |
AAAATCATTAACTGGATGAA+GGG | 0.532257 | 2:+20366576 | None:intergenic |
AACCATAAACCCTATAGTAA+TGG | 0.546098 | 2:-20365666 | MsaT007593.1:CDS |
TTTGTATCAAGCTGAATTGG+TGG | 0.548313 | 2:-20365363 | MsaT007593.1:CDS |
ACAAACAATATGCAAAAGAT+GGG | 0.554209 | 2:-20366184 | MsaT007593.1:CDS |
AAGAGGTTACTACCTGATGA+AGG | 0.555954 | 2:-20366604 | MsaT007593.1:CDS |
GAAGATCTAGGAGACTGTAA+TGG | 0.557911 | 2:-20366886 | MsaT007593.1:CDS |
ACCTTTATTTGATCCTCAAG+AGG | 0.572203 | 2:-20366161 | MsaT007593.1:CDS |
AATGAACCACGCGCTTAACT+GGG | 0.580982 | 2:+20366266 | None:intergenic |
AGACTCTGAGGAAACTGTTG+TGG | 0.581099 | 2:-20365762 | MsaT007593.1:CDS |
CGTTATCTTTAGAAGCTCAA+CGG | 0.582286 | 2:+20365940 | None:intergenic |
TCATGGTATTAGGAATATTG+TGG | 0.583709 | 2:-20365489 | MsaT007593.1:CDS |
AATGAACCATGTCAAAGTGT+AGG | 0.587676 | 2:+20366743 | None:intergenic |
AAGTATCATCACCAAGAACA+AGG | 0.600969 | 2:-20366796 | MsaT007593.1:CDS |
AAATCCGAAAAGGGTTACAA+TGG | 0.612089 | 2:-20366003 | MsaT007593.1:CDS |
TGATAACCTACACTTTGACA+TGG | 0.617264 | 2:-20366749 | MsaT007593.1:CDS |
ACTATGGCAAATGCTTCAAG+AGG | 0.626795 | 2:-20366621 | MsaT007593.1:CDS |
TCATGAAGATAGCTGGAACA+AGG | 0.635820 | 2:-20366504 | MsaT007593.1:CDS |
ATAATTGTATCGAATACGAA+AGG | 0.635920 | 2:+20365827 | None:intergenic |
TGATCCTCAAGAGGTTACCA+AGG | 0.653643 | 2:-20366152 | MsaT007593.1:CDS |
GAAATGTGAAGATTGATGTG+TGG | 0.658264 | 2:-20365439 | MsaT007593.1:CDS |
AAGCATATAGTTGATGACAC+TGG | 0.660963 | 2:-20365887 | MsaT007593.1:CDS |
GTGGCTAAAAGATTTCCTTG+TGG | 0.676872 | 2:-20365344 | MsaT007593.1:CDS |
AGGTAACCCAGTTAAGCGCG+TGG | 0.690106 | 2:-20366272 | MsaT007593.1:CDS |
AATGTGCAAGAACATCCACA+AGG | 0.743242 | 2:+20365329 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 20365250 | 20366935 | 20365250 | ID=MsaG007593 |
Chr2 | mRNA | 20365250 | 20366935 | 20365250 | ID=MsaT007593.1;Parent=MsaG007593 |
Chr2 | exon | 20365250 | 20366935 | 20365250 | ID=MsaT007593.1.exon1;Parent=MsaT007593.1 |
Chr2 | CDS | 20365250 | 20366935 | 20365250 | ID=cds.MsaT007593.1;Parent=MsaT007593.1 |
Gene Sequence |
Protein sequence |