AlfalfaGEDB | MsaG007762

M. sativa ssp. caerulea / MsaG007762

KEGG: K15032
GO: -
PFAM: PF02536.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007762	XP_024632454.1	88.861	395	42	1	1	393	1	395	0.0	712

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007762	tr\|A0A072V5J4\|A0A072V5J4_MEDTR	88.861	395	42	1	1	393	1	395	0.0	712

TFs/TRs:

Gene ID	Type	Classification
MsaG007762	TR	mTERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000005	MsaG007762	0.826495	4.682519e-54	1.227726e-51
MsaG000023	MsaG007762	0.810212	2.205289e-50	3.785459e-48
MsaG000049	MsaG007762	0.806910	1.109588e-49	1.759315e-47
MsaG000219	MsaG007762	0.854868	1.784570e-61	1.147455e-58
MsaG000315	MsaG007762	0.811457	1.189511e-50	2.104972e-48
MsaG000566	MsaG007762	0.851247	1.919831e-60	1.086210e-57
MsaG000545	MsaG007762	0.864217	2.840203e-64	2.600941e-61
MsaG000801	MsaG007762	0.834599	4.969282e-56	1.644707e-53
MsaG000944	MsaG007762	0.837512	9.126062e-57	3.297566e-54
MsaG001120	MsaG007762	0.820952	9.175626e-53	2.069580e-50
MsaG001127	MsaG007762	0.815046	1.954883e-51	3.783248e-49
MsaG001285	MsaG007762	0.808187	5.961767e-50	9.745722e-48
MsaG001308	MsaG007762	0.858674	1.370044e-62	1.013053e-59
MsaG001772	MsaG007762	0.810779	1.665583e-50	2.898903e-48
MsaG001858	MsaG007762	0.857664	2.728332e-62	1.942790e-59
MsaG002167	MsaG007762	0.806153	1.600456e-49	2.492698e-47
MsaG002810	MsaG007762	0.847523	2.069784e-59	1.031506e-56
MsaG002975	MsaG007762	0.849559	5.684374e-60	3.035203e-57
MsaG003113	MsaG007762	0.835178	3.558332e-56	1.198229e-53
MsaG003306	MsaG007762	0.823444	2.438983e-53	5.880775e-51
MsaG003375	MsaG007762	0.859183	9.665495e-63	7.285210e-60
MsaG003512	MsaG007762	0.812770	6.172677e-51	1.128291e-48
MsaG003517	MsaG007762	0.835588	2.806232e-56	9.566575e-54
MsaG003740	MsaG007762	0.818555	3.217317e-52	6.812203e-50
MsaG003939	MsaG007762	0.825862	6.609891e-54	1.702878e-51
MsaG003976	MsaG007762	0.810958	1.524161e-50	2.664352e-48
MsaG004420	MsaG007762	0.831171	3.499620e-55	1.047368e-52
MsaG004495	MsaG007762	0.821874	5.632743e-53	1.301877e-50
MsaG004571	MsaG007762	0.806965	1.080606e-49	1.715580e-47
MsaG004620	MsaG007762	0.828392	1.650478e-54	4.563557e-52
MsaG004669	MsaG007762	0.828307	1.729467e-54	4.770338e-52
MsaG004685	MsaG007762	0.826592	4.440576e-54	1.167389e-51
MsaG004838	MsaG007762	0.841633	7.837342e-58	3.221168e-55
MsaG005084	MsaG007762	0.820908	9.387060e-53	2.114814e-50
MsaG005054	MsaG007762	0.806218	1.550384e-49	2.418574e-47
MsaG005257	MsaG007762	0.877492	1.257394e-68	2.022035e-65
MsaG005345	MsaG007762	0.800084	2.843100e-48	3.851294e-46
MsaG005414	MsaG007762	0.804512	3.518404e-49	5.273996e-47
MsaG005579	MsaG007762	0.821978	5.331417e-53	1.235664e-50
MsaG005636	MsaG007762	0.829282	1.007627e-54	2.856613e-52
MsaG005664	MsaG007762	0.804516	3.511966e-49	5.264833e-47
MsaG005831	MsaG007762	0.819389	2.083346e-52	4.508817e-50
MsaG005769	MsaG007762	0.868220	1.550214e-65	1.668806e-62
MsaG005881	MsaG007762	0.834925	4.118259e-56	1.376373e-53
MsaG005892	MsaG007762	0.865889	8.526305e-65	8.346531e-62
MsaG006021	MsaG007762	0.805106	2.647593e-49	4.023774e-47
MsaG006140	MsaG007762	0.834664	4.786211e-56	1.587269e-53
MsaG006066	MsaG007762	0.808530	5.043236e-50	8.312432e-48
MsaG006231	MsaG007762	0.802789	7.984056e-49	1.150005e-46
MsaG006475	MsaG007762	0.864957	1.671176e-64	1.576140e-61
MsaG006504	MsaG007762	0.849384	6.356853e-60	3.373962e-57
MsaG006563	MsaG007762	0.862514	9.512026e-64	8.144832e-61
MsaG006613	MsaG007762	0.802883	7.634721e-49	1.102101e-46
MsaG006686	MsaG007762	0.805146	2.597680e-49	3.951668e-47
MsaG006909	MsaG007762	0.812582	6.782141e-51	1.233950e-48
MsaG007064	MsaG007762	0.857205	3.723172e-62	2.606282e-59
MsaG007546	MsaG007762	0.853898	3.395069e-61	2.108678e-58
MsaG007762	MsaG008049	0.811843	9.811769e-51	1.752830e-48
MsaG007762	MsaG008062	0.841630	7.849452e-58	3.225860e-55
MsaG007762	MsaG008458	0.869036	8.476665e-66	9.435495e-63
MsaG007762	MsaG008647	0.808364	5.469855e-50	8.979403e-48
MsaG007762	MsaG010004	0.830721	4.507163e-55	1.331538e-52
MsaG007762	MsaG010148	0.856309	6.810782e-62	4.614678e-59
MsaG007762	MsaG010302	0.871559	1.274578e-66	1.578232e-63
MsaG007762	MsaG010305	0.843864	2.013767e-58	8.889559e-56
MsaG007762	MsaG011563	0.806026	1.701344e-49	2.641815e-47
MsaG007762	MsaG011578	0.827584	2.576660e-54	6.964698e-52
MsaG007762	MsaG012013	0.832176	1.984549e-55	6.116123e-53
MsaG007762	MsaG012442	0.846265	4.556090e-59	2.176936e-56
MsaG007762	MsaG012565	0.818929	2.648904e-52	5.663955e-50
MsaG007762	MsaG013810	0.801217	1.673600e-48	2.325770e-46
MsaG007762	MsaG013952	0.803643	5.323258e-49	7.820313e-47
MsaG007762	MsaG014135	0.822084	5.038508e-53	1.171069e-50
MsaG007762	MsaG014207	0.800852	1.985620e-48	2.736833e-46
MsaG007762	MsaG014844	0.831627	2.705993e-55	8.207684e-53
MsaG007762	MsaG015012	0.844239	1.599520e-58	7.148287e-56
MsaG007762	MsaG015898	0.884090	5.531854e-71	1.212301e-67
MsaG007762	MsaG016385	0.834060	6.775027e-56	2.206395e-53
MsaG007762	MsaG016706	0.865274	1.330001e-64	1.270460e-61
MsaG007762	MsaG017108	0.810660	1.767352e-50	3.067014e-48
MsaG007762	MsaG017148	0.807223	9.534592e-50	1.522963e-47
MsaG007762	MsaG017323	0.849190	7.197105e-60	3.794643e-57
MsaG007762	MsaG017406	0.802424	9.486470e-49	1.355105e-46
MsaG007762	MsaG017725	0.817257	6.298784e-52	1.289849e-49
MsaG007762	MsaG017807	0.828508	1.547893e-54	4.293829e-52
MsaG007762	MsaG017849	0.817666	5.100391e-52	1.055416e-49
MsaG007762	MsaG017867	0.827236	3.120572e-54	8.352479e-52
MsaG007762	MsaG017957	0.883554	8.705590e-71	1.859461e-67
MsaG007762	MsaG018368	0.826552	4.537457e-54	1.191557e-51
MsaG007762	MsaG018424	0.803588	5.464104e-49	8.017114e-47
MsaG007762	MsaG018440	0.819000	2.552965e-52	5.468880e-50
MsaG007762	MsaG018490	0.824852	1.143363e-53	2.864513e-51
MsaG007762	MsaG018501	0.802045	1.134155e-48	1.606068e-46
MsaG007762	MsaG018783	0.870103	3.819618e-66	4.445669e-63
MsaG007762	MsaG018958	0.861170	2.441435e-63	1.984679e-60
MsaG007762	MsaG019269	0.823270	2.676773e-53	6.424074e-51
MsaG007762	MsaG019493	0.808219	5.869521e-50	9.602219e-48
MsaG007762	MsaG019547	0.815475	1.570765e-51	3.073089e-49
MsaG007762	MsaG019616	0.817428	5.766711e-52	1.186082e-49
MsaG007762	MsaG019661	0.804309	3.876819e-49	5.784125e-47
MsaG007762	MsaG019937	0.832878	1.331375e-55	4.187718e-53
MsaG007762	MsaG020335	0.831344	3.175579e-55	9.551587e-53
MsaG007762	MsaG020337	0.809885	2.591698e-50	4.413613e-48
MsaG007762	MsaG020607	0.866901	4.084906e-65	4.167291e-62
MsaG007762	MsaG020592	0.816210	1.078860e-51	2.150571e-49
MsaG007762	MsaG020593	0.818011	4.267086e-52	8.909155e-50
MsaG007762	MsaG020667	0.834272	5.998118e-56	1.965812e-53
MsaG007762	MsaG020679	0.805549	2.140019e-49	3.285973e-47
MsaG007762	MsaG020738	0.807890	6.893376e-50	1.118863e-47
MsaG007762	MsaG020778	0.812209	8.174489e-51	1.473488e-48
MsaG007762	MsaG020791	0.816804	7.955278e-52	1.610068e-49
MsaG007762	MsaG021274	0.835865	2.389188e-56	8.212696e-54
MsaG007762	MsaG021317	0.831201	3.442191e-55	1.031035e-52
MsaG007762	MsaG021343	0.833891	7.462411e-56	2.418145e-53
MsaG007762	MsaG021422	0.871709	1.136719e-66	1.416500e-63
MsaG007762	MsaG021643	0.802305	1.003434e-48	1.429468e-46
MsaG007762	MsaG021729	0.807398	8.756964e-50	1.404627e-47
MsaG007762	MsaG021816	0.817814	4.724506e-52	9.814127e-50
MsaG007762	MsaG022017	0.833698	8.336199e-56	2.686209e-53
MsaG007762	MsaG022191	0.802637	8.579218e-49	1.231489e-46
MsaG007762	MsaG022192	0.820255	1.323569e-52	2.930959e-50
MsaG007762	MsaG022554	0.905973	5.763434e-80	4.213696e-76
MsaG007762	MsaG023302	0.819535	1.930674e-52	4.194194e-50
MsaG007762	MsaG023582	0.857468	3.115276e-62	2.202296e-59
MsaG007762	MsaG023662	0.828127	1.910386e-54	5.243014e-52
MsaG007762	MsaG023666	0.827776	2.318725e-54	6.301080e-52
MsaG007762	MsaG023815	0.808050	6.374899e-50	1.038679e-47
MsaG007762	MsaG023912	0.819843	1.643375e-52	3.599223e-50
MsaG007762	MsaG023852	0.857313	3.459300e-62	2.431555e-59
MsaG007762	MsaG023879	0.831713	2.578003e-55	7.839467e-53
MsaG007762	MsaG023972	0.822693	3.643964e-53	8.609538e-51
MsaG007762	MsaG024000	0.801580	1.411969e-48	1.978412e-46
MsaG007762	MsaG024135	0.813517	4.239831e-51	7.896265e-49
MsaG007762	MsaG024335	0.842317	5.177951e-58	2.175184e-55
MsaG007762	MsaG025864	0.823496	2.372438e-53	5.728397e-51
MsaG007762	MsaG026243	0.815816	1.320128e-51	2.605191e-49
MsaG007762	MsaG026722	0.847693	1.859413e-59	9.319590e-57
MsaG007762	MsaG026756	0.852589	8.016883e-61	4.754074e-58
MsaG007762	MsaG026818	0.825071	1.015722e-53	2.560079e-51
MsaG007762	MsaG027127	0.806556	1.317114e-49	2.071087e-47
MsaG007762	MsaG027251	0.827109	3.345936e-54	8.924020e-52
MsaG007762	MsaG027255	0.811174	1.369203e-50	2.406185e-48
MsaG007762	MsaG027305	0.881501	4.835352e-70	9.361072e-67
MsaG007762	MsaG027342	0.845971	5.472330e-59	2.589221e-56
MsaG007762	MsaG027500	0.859591	7.297296e-63	5.586177e-60
MsaG007762	MsaG027802	0.828863	1.271777e-54	3.562981e-52
MsaG007762	MsaG027935	0.845682	6.549472e-59	3.069506e-56
MsaG007762	MsaG028188	0.812805	6.063251e-51	1.109287e-48
MsaG007762	MsaG028221	0.810635	1.789065e-50	3.102875e-48
MsaG007762	MsaG028483	0.842206	5.537812e-58	2.317949e-55
MsaG007762	MsaG028522	0.848895	8.682992e-60	4.532048e-57
MsaG007762	MsaG028668	0.821570	6.617622e-53	1.517175e-50
MsaG007762	MsaG028675	0.826675	4.242664e-54	1.117970e-51
MsaG007762	MsaG028927	0.809378	3.326894e-50	5.596584e-48
MsaG007762	MsaG028928	0.869928	4.354761e-66	5.031692e-63
MsaG007762	MsaG029074	0.816481	9.392127e-52	1.885092e-49
MsaG007762	MsaG029106	0.815096	1.905655e-51	3.692630e-49
MsaG007762	MsaG029162	0.834022	6.923934e-56	2.252307e-53
MsaG007762	MsaG029539	0.818503	3.306242e-52	6.991069e-50
MsaG007762	MsaG029892	0.861728	1.652404e-63	1.372236e-60
MsaG007762	MsaG029986	0.842301	5.228396e-58	2.195181e-55
MsaG007762	MsaG030494	0.817775	4.820474e-52	1.000333e-49
MsaG007762	MsaG030698	0.813140	5.124652e-51	9.454322e-49
MsaG007762	MsaG031022	0.819494	1.972939e-52	4.281513e-50
MsaG007762	MsaG032331	0.840091	1.980025e-57	7.751579e-55
MsaG007762	MsaG032424	0.858252	1.827812e-62	1.330504e-59
MsaG007762	MsaG033487	0.830089	6.424045e-55	1.863935e-52
MsaG007762	MsaG033570	0.827057	3.442944e-54	9.169085e-52
MsaG007762	MsaG034202	0.820406	1.222648e-52	2.718176e-50
MsaG007762	MsaG034763	0.869955	4.268163e-66	4.937413e-63
MsaG007762	MsaG035122	0.811284	1.296432e-50	2.284468e-48
MsaG007762	MsaG035531	0.807629	7.826188e-50	1.262266e-47
MsaG007762	MsaG036485	0.877134	1.673498e-68	2.647614e-65
MsaG007762	MsaG036511	0.831631	2.700143e-55	8.190910e-53
MsaG007762	MsaG036954	0.871205	1.666556e-66	2.032315e-63
MsaG007762	MsaG038039	0.801514	1.456002e-48	2.037112e-46
MsaG007762	MsaG038100	0.806593	1.293725e-49	2.036128e-47
MsaG007762	MsaG038108	0.818981	2.578089e-52	5.520138e-50
MsaG007762	MsaG038752	0.845278	8.414879e-59	3.890964e-56
MsaG007762	MsaG039466	0.809184	3.659888e-50	6.128028e-48
MsaG007762	MsaG040443	0.804634	3.319430e-49	4.989769e-47
MsaG007762	MsaG040450	0.813797	3.679929e-51	6.902071e-49
MsaG007762	MsaG040452	0.821381	7.313969e-53	1.668463e-50
MsaG007762	MsaG040696	0.821615	6.462772e-53	1.483458e-50
MsaG007762	MsaG040708	0.812389	7.470074e-51	1.352609e-48
MsaG007762	MsaG041814	0.800594	2.240465e-48	3.070235e-46
MsaG007762	MsaG042771	0.809158	3.706096e-50	6.201680e-48
MsaG007762	MsaG043238	0.812510	7.030182e-51	1.276822e-48
MsaG007762	MsaG043846	0.803603	5.426087e-49	7.963966e-47
MsaG007762	MsaG043998	0.853399	4.714080e-61	2.876682e-58
MsaG007762	MsaG044570	0.848128	1.412464e-59	7.183873e-57
MsaG007762	MsaG044602	0.808288	5.675055e-50	9.299612e-48
MsaG007762	MsaG044707	0.843908	1.959869e-58	8.664203e-56
MsaG007762	MsaG045234	0.865036	1.578647e-64	1.493618e-61
MsaG007762	MsaG045242	0.842094	5.928531e-58	2.472766e-55
MsaG007762	MsaG045302	0.809116	3.783683e-50	6.325155e-48
MsaG007762	MsaG045429	0.833528	9.190782e-56	2.946692e-53
MsaG007762	MsaG045454	0.815187	1.819688e-51	3.534251e-49
MsaG007762	MsaG045582	0.858289	1.782184e-62	1.299110e-59
MsaG007762	MsaG045595	0.842110	5.869141e-58	2.449161e-55
MsaG007762	MsaG045600	0.836980	1.246879e-56	4.432451e-54
MsaG007762	MsaG045790	0.862165	1.215970e-63	1.027094e-60
MsaG007762	MsaG046150	0.812542	6.920072e-51	1.257803e-48
MsaG007762	MsaG046172	0.862012	1.354283e-63	1.137122e-60
MsaG007762	MsaG046492	0.862998	6.756573e-64	5.896860e-61
MsaG007762	MsaG046687	0.822528	3.978484e-53	9.358213e-51
MsaG007762	MsaG046718	0.843413	2.654057e-58	1.154842e-55
MsaG007762	MsaG046740	0.828715	1.380288e-54	3.850872e-52
MsaG007762	MsaG047065	0.843370	2.725523e-58	1.184326e-55
MsaG007762	MsaG001761	0.828134	1.903662e-54	5.225481e-52
MsaG007762	MsaG003008	0.832703	1.470816e-55	4.602810e-53
MsaG007762	MsaG001632	0.807436	8.594534e-50	1.379852e-47
MsaG007762	MsaG002387	0.824496	1.385632e-53	3.437950e-51
MsaG007762	MsaG001760	0.810996	1.495442e-50	2.616565e-48
MsaG007762	MsaG007925	0.810517	1.896956e-50	3.280556e-48
MsaG007762	MsaG008213	0.837897	7.276795e-57	2.660366e-54
MsaG007762	MsaG013515	0.820201	1.362301e-52	3.012306e-50
MsaG007762	MsaG017032	0.817134	6.710707e-52	1.369832e-49
MsaG007762	MsaG012745	0.814684	2.349768e-51	4.506139e-49
MsaG007762	MsaG013813	0.826784	3.997506e-54	1.056531e-51
MsaG007762	MsaG013019	0.802859	7.722947e-49	1.114187e-46
MsaG007762	MsaG013040	0.831941	2.266951e-55	6.939210e-53
MsaG007762	MsaG011720	0.822450	4.146826e-53	9.733614e-51
MsaG007762	MsaG014051	0.803871	4.776827e-49	7.054739e-47
MsaG007762	MsaG014174	0.835521	2.916407e-56	9.922690e-54
MsaG007762	MsaG020185	0.807082	1.020745e-49	1.625055e-47
MsaG007762	MsaG020164	0.832352	1.795299e-55	5.561115e-53
MsaG007762	MsaG020545	0.833518	9.240177e-56	2.961685e-53
MsaG007762	MsaG022159	0.858565	1.475684e-62	1.086798e-59
MsaG007762	MsaG027471	0.803649	5.307897e-49	7.798941e-47
MsaG007762	MsaG027071	0.832869	1.338172e-55	4.208005e-53
MsaG007762	MsaG026791	0.801056	1.805392e-48	2.499785e-46
MsaG007762	MsaG027141	0.818047	4.187180e-52	8.750320e-50
MsaG007762	MsaG027837	0.823203	2.775523e-53	6.648681e-51
MsaG007762	MsaG028138	0.808072	6.305867e-50	1.027974e-47
MsaG007762	MsaG028048	0.811894	9.563985e-51	1.710736e-48
MsaG007762	MsaG031608	0.804518	3.507681e-49	5.258723e-47
MsaG007762	MsaG032246	0.802545	8.960379e-49	1.283495e-46
MsaG007762	MsaG029995	0.849323	6.610604e-60	3.501016e-57
MsaG007762	MsaG032681	0.822957	3.164350e-53	7.530132e-51
MsaG007762	MsaG033505	0.846110	5.017404e-59	2.385049e-56
MsaG007762	MsaG032721	0.847094	2.710658e-59	1.331530e-56
MsaG007762	MsaG032969	0.818702	2.980881e-52	6.335862e-50
MsaG007762	MsaG040323	0.855529	1.149106e-61	7.567473e-59
MsaG007762	MsaG036566	0.870446	2.953831e-66	3.487142e-63
MsaG007762	MsaG037652	0.850407	3.299678e-60	1.813386e-57
MsaG007762	MsaG035337	0.850083	4.065492e-60	2.209361e-57
MsaG007762	MsaG043789	0.907362	1.311718e-80	1.046810e-76
MsaG007762	MsaG043527	0.834491	5.287971e-56	1.744537e-53
MsaG007762	MsaG042308	0.855234	1.399250e-61	9.115909e-59
MsaG007762	MsaG042389	0.816138	1.119373e-51	2.227227e-49
MsaG007762	MsaG041364	0.814828	2.184108e-51	4.203791e-49
MsaG007762	MsaG043455	0.835786	2.501059e-56	8.577031e-54
MsaG007762	MsaG043234	0.864465	2.378385e-64	2.199510e-61
MsaG007762	MsaG045902	0.814954	2.048158e-51	3.954691e-49
MsaG007762	MsaG043778	0.853610	4.103482e-61	2.522574e-58
MsaG007762	MsaG042288	0.805537	2.153018e-49	3.304994e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007762	MtrunA17_Chr2g0295731	75.578	389	85	3	1	387	1	381	0.0	580
MsaG007762	MtrunA17_Chr2g0296151	75.521	384	84	2	9	392	6	379	0.0	580
MsaG007762	MtrunA17_Chr2g0296111	66.582	395	115	4	1	393	1	380	0.0	518
MsaG007762	MtrunA17_Chr2g0295741	65.394	393	127	4	1	392	1	385	1.90e-179	504
MsaG007762	MtrunA17_Chr2g0296121	66.062	386	127	2	9	393	84	466	1.50e-176	500
MsaG007762	MtrunA17_Chr4g0067121	52.632	342	159	2	52	392	50	389	7.67e-125	365
MsaG007762	MtrunA17_Chr2g0296221	50.909	385	178	6	18	391	38	422	2.71e-124	366
MsaG007762	MtrunA17_Chr2g0296251	49.608	383	151	4	41	383	18	398	2.26e-121	357
MsaG007762	MtrunA17_Chr2g0296711	51.754	342	162	2	55	393	55	396	8.56e-121	357
MsaG007762	MtrunA17_Chr2g0296721	50.000	364	173	3	36	391	28	390	7.85e-119	350
MsaG007762	MtrunA17_Chr2g0296301	48.718	351	174	4	41	387	22	370	5.21e-118	348
MsaG007762	MtrunA17_Chr2g0296741	52.522	337	155	3	55	387	72	407	2.44e-117	347
MsaG007762	MtrunA17_Chr2g0315731	49.727	366	164	4	36	387	48	407	1.84e-116	345
MsaG007762	MtrunA17_Chr2g0296231	48.168	382	190	5	14	391	11	388	1.08e-115	342
MsaG007762	MtrunA17_Chr2g0296171	50.404	371	163	5	31	383	28	395	5.20e-115	341
MsaG007762	MtrunA17_Chr2g0296291	45.906	403	172	4	27	391	12	406	3.62e-113	337
MsaG007762	MtrunA17_Chr2g0296191	50.000	374	176	6	18	380	621	994	1.20e-109	345
MsaG007762	MtrunA17_Chr2g0296191	49.153	354	176	2	29	382	160	509	4.21e-105	333
MsaG007762	MtrunA17_Chr2g0296181	47.956	367	157	5	31	391	27	365	1.21e-104	314
MsaG007762	MtrunA17_Chr2g0295761	46.221	344	182	2	44	386	51	392	2.71e-102	308
MsaG007762	MtrunA17_Chr2g0295711	70.098	204	50	4	1	202	1	195	8.69e-90	269
MsaG007762	MtrunA17_Chr4g0067671	42.458	358	197	4	11	368	9	357	2.42e-89	274
MsaG007762	MtrunA17_Chr4g0067141	42.296	331	189	1	51	381	42	370	2.78e-89	274
MsaG007762	MtrunA17_Chr2g0286191	44.578	332	178	4	54	383	32	359	8.36e-87	267
MsaG007762	MtrunA17_Chr2g0296131	65.497	171	59	0	223	393	2	172	1.38e-77	237
MsaG007762	MtrunA17_Chr2g0296161	64.881	168	59	0	226	393	1	168	1.25e-76	234
MsaG007762	MtrunA17_Chr2g0296551	56.915	188	81	0	204	391	5	192	6.77e-73	226
MsaG007762	MtrunA17_Chr2g0296211	55.721	201	86	1	194	391	166	366	5.72e-71	227
MsaG007762	MtrunA17_Chr2g0295751	67.614	176	49	3	9	182	7	176	4.31e-67	220
MsaG007762	MtrunA17_Chr2g0296701	60.494	162	64	0	230	391	3	164	4.39e-66	207
MsaG007762	MtrunA17_Chr2g0295721	79.646	113	23	0	226	338	1	113	3.07e-57	183
MsaG007762	MtrunA17_Chr2g0296751	60.294	136	54	0	256	391	2	137	8.83e-54	176
MsaG007762	MtrunA17_Chr4g0001831	32.303	356	231	7	33	381	16	368	3.38e-46	162
MsaG007762	MtrunA17_Chr2g0286221	48.077	156	79	2	228	383	16	169	1.90e-40	141
MsaG007762	MtrunA17_Chr8g0377781	29.831	295	204	2	86	377	74	368	4.31e-34	130
MsaG007762	MtrunA17_Chr2g0296561	50.735	136	58	3	38	173	23	149	1.06e-33	122
MsaG007762	MtrunA17_Chr8g0377801	26.647	334	241	3	51	381	53	385	1.55e-28	115
MsaG007762	MtrunA17_Chr4g0067131	46.988	83	44	0	299	381	1	83	7.53e-21	86.3
MsaG007762	MtrunA17_Chr4g0067681	54.098	61	28	0	288	348	1	61	4.27e-17	75.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007762	AT5G07900.1	36.637	333	203	4	54	380	69	399	5.06e-69	223
MsaG007762	AT1G21150.1	30.816	331	221	4	54	378	56	384	2.74e-48	169
MsaG007762	AT1G21150.3	29.912	341	231	4	44	378	10	348	2.95e-48	167
MsaG007762	AT1G21150.2	30.816	331	221	4	54	378	120	448	1.09e-47	169
MsaG007762	AT1G61980.3	28.455	369	219	8	54	381	52	416	1.62e-34	132
MsaG007762	AT1G61980.2	28.455	369	219	8	54	381	52	416	1.62e-34	132
MsaG007762	AT1G61980.1	28.455	369	219	8	54	381	52	416	1.62e-34	132
MsaG007762	AT1G61970.2	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.7	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.6	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.3	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.5	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.4	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G61970.1	26.685	356	208	7	55	366	53	399	1.37e-31	124
MsaG007762	AT1G62120.1	28.134	359	205	9	55	368	57	407	3.79e-31	123
MsaG007762	AT1G61990.2	27.324	355	206	7	55	368	53	396	1.24e-30	121
MsaG007762	AT1G61990.1	27.324	355	206	7	55	368	53	396	1.24e-30	121
MsaG007762	AT5G64950.1	28.616	318	209	5	82	388	65	375	2.16e-30	120
MsaG007762	AT1G62085.1	27.717	368	179	10	54	342	55	414	1.42e-28	116
MsaG007762	AT1G62085.2	27.717	368	179	10	54	342	55	414	1.42e-28	116
MsaG007762	AT3G46950.1	31.203	266	172	5	38	298	32	291	2.18e-27	113
MsaG007762	AT5G23930.1	27.110	391	203	10	54	371	55	436	1.83e-26	110
MsaG007762	AT1G62110.1	29.960	247	164	4	55	296	53	295	4.82e-23	100
MsaG007762	AT1G61960.1	28.794	257	167	4	48	296	46	294	1.18e-22	99.8
MsaG007762	AT1G62010.1	24.232	293	184	3	87	343	69	359	1.29e-21	96.3
MsaG007762	AT1G62150.1	24.185	368	192	9	55	343	59	418	1.79e-20	93.2

Find 85 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATACCTCATTCACAATTT+TGG	0.061494	2:+22635707	MsaT007762.1:CDS
GCAATCTGACAAGGAAATTT+TGG	0.125855	2:+22636048	MsaT007762.1:CDS
CGACCAACCCCATTTCTTAA+AGG	0.171385	2:-22636332	None:intergenic
GGAAAAGAGGGTTAGGGTTT+AGG	0.191466	2:-22635616	None:intergenic
GTGAAGGAATTAAAGGATTT+GGG	0.210460	2:+22636223	MsaT007762.1:CDS
GAAAAGAGGGTTAGGGTTTA+GGG	0.220235	2:-22635615	None:intergenic
GGTGAAGGAATTAAAGGATT+TGG	0.236355	2:+22636222	MsaT007762.1:CDS
TTAATTTAGTGATGAGCTTT+TGG	0.242008	2:+22636419	MsaT007762.1:CDS
TGACAAAATATCAGGTGTTT+TGG	0.255478	2:-22636476	None:intergenic
GTGCAATTTCTTCTCAATAA+TGG	0.259750	2:+22636538	MsaT007762.1:CDS
TAATCCCTTGAGATAGATTA+AGG	0.266032	2:-22635570	None:intergenic
CAAGTTGGTGAAGGAATTAA+AGG	0.289341	2:+22636216	MsaT007762.1:CDS
TTTCTCATTCCACAAGGTTT+TGG	0.304420	2:-22636302	None:intergenic
TTATCTTATAAAGTTGTATC+AGG	0.309342	2:+22636657	MsaT007762.1:CDS
TGAGAACTGAATCAGGGTTT+TGG	0.309396	2:-22635790	None:intergenic
CTTGTAACTGGAGCAAAGTT+TGG	0.321987	2:-22635750	None:intergenic
AAGAAATTGAGAACTGAATC+AGG	0.327189	2:-22635797	None:intergenic
AAACTTTGGTAACACCCTTT+TGG	0.336536	2:-22635897	None:intergenic
CAAAAGCGTTGGTGCAGATA+TGG	0.344003	2:-22635664	None:intergenic
CTTGAAACGGAGCTTGTAAC+TGG	0.364053	2:-22635762	None:intergenic
TTGGGTCAATCAGTTGGGTT+GGG	0.365374	2:+22636438	MsaT007762.1:CDS
AAGTTGATGCCTTTAAGAAA+TGG	0.366199	2:+22636323	MsaT007762.1:CDS
AGTTGATGCCTTTAAGAAAT+GGG	0.371481	2:+22636324	MsaT007762.1:CDS
AAACTTAATGACAAAATATC+AGG	0.378240	2:-22636484	None:intergenic
GCTTAATTTATCCATTCTTA+AGG	0.397953	2:+22636581	MsaT007762.1:CDS
CAAACATTAAAAGATTGCTT+AGG	0.402903	2:+22636158	MsaT007762.1:CDS
GTCAGAAGTAGAAGCGCCTT+TGG	0.405353	2:-22635933	None:intergenic
AATAGTCCCAACCTATGAAT+TGG	0.421560	2:+22636012	MsaT007762.1:CDS
ATATGGAGAGAAAAGAGAAA+TGG	0.422482	2:-22635647	None:intergenic
TGATGTTGGAAAAGAGGGTT+AGG	0.425634	2:-22635623	None:intergenic
TTTGGGTCAATCAGTTGGGT+TGG	0.429067	2:+22636437	MsaT007762.1:CDS
GGAAGTAGCCATGGTGCCTT+GGG	0.435586	2:-22635863	None:intergenic
AAAAGAGAAATGGGTGATGT+TGG	0.437981	2:-22635637	None:intergenic
TTCCCTGCGACCCCACCAAA+AGG	0.439725	2:+22635882	MsaT007762.1:CDS
TATGGAGAGAAAAGAGAAAT+GGG	0.440569	2:-22635646	None:intergenic
GGGAAGTAGCCATGGTGCCT+TGG	0.446977	2:-22635864	None:intergenic
AAACATTAAAAGATTGCTTA+GGG	0.465201	2:+22636159	MsaT007762.1:CDS
CTCAATTTCTTTAGAAACCA+TGG	0.466986	2:+22635809	MsaT007762.1:CDS
GGGAATGATACGACGTAGTT+GGG	0.467688	2:-22635843	None:intergenic
AGGCTTACAGACAAGACGCC+AGG	0.474816	2:-22635980	None:intergenic
ATGGGTGATGTTGGAAAAGA+GGG	0.475318	2:-22635628	None:intergenic
GAATCTGTACACCAATTCAT+AGG	0.478001	2:-22636023	None:intergenic
CAAAGTTTGGAAGCAGATTG+AGG	0.480265	2:-22635737	None:intergenic
CTGTACACCAATTCATAGGT+TGG	0.484595	2:-22636019	None:intergenic
ATCACAATGCTGATTGAGAA+TGG	0.486666	2:+22636124	MsaT007762.1:CDS
TGGGAATGATACGACGTAGT+TGG	0.489187	2:-22635844	None:intergenic
GATTGCTTAGGGAACATACT+CGG	0.497604	2:+22636170	MsaT007762.1:CDS
TCAGTTGGGTTGGGATGCTA+TGG	0.506950	2:+22636447	MsaT007762.1:CDS
TGTACACCAATTCATAGGTT+GGG	0.507173	2:-22636018	None:intergenic
TTGGGACTATTTGATTCTTG+AGG	0.509547	2:-22636000	None:intergenic
AAAGTTTGGAAGCAGATTGA+GGG	0.518444	2:-22635736	None:intergenic
AACTTCTCAGACCTTAAGAA+TGG	0.523239	2:-22636592	None:intergenic
GGGTCGCAGGGAAGTAGCCA+TGG	0.525873	2:-22635872	None:intergenic
TCCCTGCGACCCCACCAAAA+GGG	0.532744	2:+22635883	MsaT007762.1:CDS
AACTCAAGCTTGCATACACC+AGG	0.537467	2:+22636683	MsaT007762.1:CDS
AATGGGTGATGTTGGAAAAG+AGG	0.538598	2:-22635629	None:intergenic
GAGGTATGAGACAGCAAAAG+AGG	0.548116	2:-22635693	None:intergenic
CGCCAGGGTTCTTACACACA+AGG	0.557000	2:-22635964	None:intergenic
ATTGCTTAGGGAACATACTC+GGG	0.568007	2:+22636171	MsaT007762.1:CDS
CGAGCCCAAAATTGTGAATG+AGG	0.569173	2:-22635712	None:intergenic
GTTGATGCCTTTAAGAAATG+GGG	0.573670	2:+22636325	MsaT007762.1:CDS
CAGATTCTTGCAATCTGACA+AGG	0.575407	2:+22636039	MsaT007762.1:CDS
TGTTCAAGTTCAACAATACA+TGG	0.576396	2:+22635537	MsaT007762.1:CDS
CAGAACCTTAATCTATCTCA+AGG	0.578893	2:+22635565	MsaT007762.1:CDS
AGAGGTTGAATCAAAAGCGT+TGG	0.582755	2:-22635675	None:intergenic
TGAAGGAATTAAAGGATTTG+GGG	0.584499	2:+22636224	MsaT007762.1:CDS
TGACAATCATGTCTTGTCCC+TGG	0.585106	2:-22636701	None:intergenic
GACACGAGACATGCTCAAGT+TGG	0.588113	2:+22636201	MsaT007762.1:CDS
AGAAATTGAGAACTGAATCA+GGG	0.588690	2:-22635796	None:intergenic
AATTGCACAACAGTGGCTCG+TGG	0.602758	2:-22636523	None:intergenic
ATGCCTTTAAGAAATGGGGT+TGG	0.606718	2:+22636329	MsaT007762.1:CDS
TGAGATAGATTAAGGTTCTG+TGG	0.615734	2:-22635562	None:intergenic
GTTGGGAGTTAGAGAAACCA+TGG	0.615746	2:-22635826	None:intergenic
CATCAACAACCAAAACCTTG+TGG	0.615914	2:+22636293	MsaT007762.1:CDS
AGACATGCTCAAGTTGGTGA+AGG	0.618045	2:+22636207	MsaT007762.1:CDS
GATGTTGGAAAAGAGGGTTA+GGG	0.618515	2:-22635622	None:intergenic
GGCTTACAGACAAGACGCCA+GGG	0.643701	2:-22635979	None:intergenic
ATCAACTTTCTCATTCCACA+AGG	0.645223	2:-22636308	None:intergenic
GAGAAGAAATTGCACAACAG+TGG	0.646434	2:-22636530	None:intergenic
AGAACCTTAATCTATCTCAA+GGG	0.657921	2:+22635566	MsaT007762.1:CDS
AACCTTGTGTGTAAGAACCC+TGG	0.659854	2:+22635962	MsaT007762.1:CDS
ACTACGTCGTATCATTCCCA+AGG	0.661929	2:+22635847	MsaT007762.1:CDS
GTATCATTCCCAAGGCACCA+TGG	0.712393	2:+22635855	MsaT007762.1:CDS
ATGGATGTTATCATACAGTG+AGG	0.724940	2:-22636388	None:intergenic
ACTCAAGCTTGCATACACCA+GGG	0.735651	2:+22636684	MsaT007762.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	22635536	22636717	22635536	ID=MsaG007762
Chr2	mRNA	22635536	22636717	22635536	ID=MsaT007762.1;Parent=MsaG007762
Chr2	exon	22635536	22636717	22635536	ID=MsaT007762.1.exon1;Parent=MsaT007762.1
Chr2	CDS	22635536	22636717	22635536	ID=cds.MsaT007762.1;Parent=MsaT007762.1

Gene Sequence

>MsaT007762.1

ATGTTCAAGTTCAACAATACATGGCGCCACAGAACCTTAATCTATCTCAAGGGATTAACTTACCCCCAAAAATCACAATCCCTAAACCCTAACCCTCTTTTCCAACATCACCCATTTCTCTTTTCTCTCCATATCTGCACCAACGCTTTTGATTCAACCTCTTTTGCTGTCTCATACCTCATTCACAATTTTGGGCTCGACCCTCAATCTGCTTCCAAACTTTGCTCCAGTTACAAGCTCCGTTTCAAGACTCACCAAAACCCTGATTCAGTTCTCAATTTCTTTAGAAACCATGGTTTCTCTAACTCCCAACTACGTCGTATCATTCCCAAGGCACCATGGCTACTTCCCTGCGACCCCACCAAAAGGGTGTTACCAAAGTTTCAATTTTTTCTCTCCAAAGGCGCTTCTACTTCTGACATTGTTAACCTTGTGTGTAAGAACCCTGGCGTCTTGTCTGTAAGCCTCAAGAATCAAATAGTCCCAACCTATGAATTGGTGTACAGATTCTTGCAATCTGACAAGGAAATTTTGGCATTGTTGAATTACAATACAAATTTACTTTGTGATCGTACTGTGCATAATAACATCACAATGCTGATTGAGAATGGAGTGTCCCACTCAAACATTAAAAGATTGCTTAGGGAACATACTCGGGCATTCAAGACACGAGACATGCTCAAGTTGGTGAAGGAATTAAAGGATTTGGGGTTTAATCATTCAAAAACAACTTTTGGAGTAGCATTGATAGCAAAATCATCAACAACCAAAACCTTGTGGAATGAGAAAGTTGATGCCTTTAAGAAATGGGGTTGGTCGAATGAAGATGTTCTTCAAGCATTTAGAAAGCAGCCTCACTGTATGATAACATCCATAGATAAAATTAATTTAGTGATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCCAAAACACCTGATATTTTGTCATTAAGTTTGGAAAAAAGGATCATTCCACGAGCCACTGTTGTGCAATTTCTTCTCAATAATGGTTTGCGAAGTAAGAATTCAAGCTTAATTTATCCATTCTTAAGGTCTGAGAAGTTGTTTCTTGATATGTTTATAAAACGTTTTAAGAATGAGTCTTCTTATCTTATAAAGTTGTATCAGGAAAAACTCAAGCTTGCATACACCAGGGACAAGACATGA

Protein sequence

>MsaT007762.1

MFKFNNTWRHRTLIYLKGLTYPQKSQSLNPNPLFQHHPFLFSLHICTNAFDSTSFAVSYLIHNFGLDPQSASKLCSSYKLRFKTHQNPDSVLNFFRNHGFSNSQLRRIIPKAPWLLPCDPTKRVLPKFQFFLSKGASTSDIVNLVCKNPGVLSVSLKNQIVPTYELVYRFLQSDKEILALLNYNTNLLCDRTVHNNITMLIENGVSHSNIKRLLREHTRAFKTRDMLKLVKELKDLGFNHSKTTFGVALIAKSSTTKTLWNEKVDAFKKWGWSNEDVLQAFRKQPHCMITSIDKINLVMSFWVNQLGWDAMAIAKTPDILSLSLEKRIIPRATVVQFLLNNGLRSKNSSLIYPFLRSEKLFLDMFIKRFKNESSYLIKLYQEKLKLAYTRDKT*