AlfalfaGEDB | MsaG007768

M. sativa ssp. caerulea / MsaG007768

KEGG: K15032
GO: -
PFAM: PF02536.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007768	XP_013463279.1	93.684	285	18	0	28	312	103	387	0.0	546

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007768	tr\|A0A072V6P9\|A0A072V6P9_MEDTR	93.684	285	18	0	28	312	103	387	0.0	546

TFs/TRs:

Gene ID	Type	Classification
MsaG007768	TR	mTERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG007768	0.818785	2.854386e-52	6.080290e-50
MsaG000142	MsaG007768	0.803136	6.771606e-49	9.832458e-47
MsaG000325	MsaG007768	0.830591	4.850033e-55	1.427467e-52
MsaG000419	MsaG007768	0.822073	5.069373e-53	1.177885e-50
MsaG000459	MsaG007768	0.813271	4.797081e-51	8.879017e-49
MsaG001273	MsaG007768	0.806360	1.448263e-49	2.266774e-47
MsaG001932	MsaG007768	0.803587	5.466651e-49	8.020720e-47
MsaG003422	MsaG007768	0.815654	1.434068e-51	2.818511e-49
MsaG003470	MsaG007768	0.804506	3.527760e-49	5.287337e-47
MsaG003665	MsaG007768	0.813665	3.933066e-51	7.352174e-49
MsaG003712	MsaG007768	0.816632	8.690769e-52	1.751101e-49
MsaG003715	MsaG007768	0.833409	9.835527e-56	3.142453e-53
MsaG003831	MsaG007768	0.828806	1.312278e-54	3.670640e-52
MsaG003804	MsaG007768	0.811145	1.388829e-50	2.438956e-48
MsaG004014	MsaG007768	0.813717	3.832667e-51	7.173702e-49
MsaG004092	MsaG007768	0.838846	4.153174e-57	1.563921e-54
MsaG004112	MsaG007768	0.847938	1.592986e-59	8.050650e-57
MsaG004280	MsaG007768	0.800491	2.351254e-48	3.214449e-46
MsaG004354	MsaG007768	0.805247	2.474625e-49	3.773258e-47
MsaG004773	MsaG007768	0.812467	7.184224e-51	1.303379e-48
MsaG004856	MsaG007768	0.817596	5.290034e-52	1.092685e-49
MsaG005055	MsaG007768	0.808255	5.766892e-50	9.442767e-48
MsaG005100	MsaG007768	0.804483	3.567301e-49	5.343741e-47
MsaG005568	MsaG007768	0.811754	1.025786e-50	1.828507e-48
MsaG005766	MsaG007768	0.815655	1.432757e-51	2.816065e-49
MsaG005886	MsaG007768	0.807042	1.040941e-49	1.655649e-47
MsaG006038	MsaG007768	0.815572	1.495260e-51	2.932578e-49
MsaG006141	MsaG007768	0.818131	4.009184e-52	8.396528e-50
MsaG006610	MsaG007768	0.802131	1.089181e-48	1.545395e-46
MsaG006657	MsaG007768	0.805470	2.222689e-49	3.406697e-47
MsaG006683	MsaG007768	0.803217	6.518039e-49	9.481872e-47
MsaG007036	MsaG007768	0.808135	6.116604e-50	9.986179e-48
MsaG007091	MsaG007768	0.827363	2.910575e-54	7.818259e-52
MsaG007416	MsaG007768	0.826102	5.801028e-54	1.504493e-51
MsaG007768	MsaG007828	0.807272	9.310955e-50	1.488974e-47
MsaG007768	MsaG008298	0.851787	1.352511e-60	7.798167e-58
MsaG007768	MsaG008511	0.815075	1.925469e-51	3.729139e-49
MsaG007768	MsaG008634	0.844710	1.196550e-58	5.430589e-56
MsaG007768	MsaG009389	0.802168	1.070324e-48	1.519939e-46
MsaG007768	MsaG010104	0.824066	1.746971e-53	4.283968e-51
MsaG007768	MsaG010337	0.806588	1.296719e-49	2.040606e-47
MsaG007768	MsaG010598	0.809657	2.899835e-50	4.911284e-48
MsaG007768	MsaG010860	0.802782	8.010101e-49	1.153576e-46
MsaG007768	MsaG010902	0.810085	2.348544e-50	4.018920e-48
MsaG007768	MsaG011484	0.842230	5.456901e-58	2.285837e-55
MsaG007768	MsaG011812	0.801179	1.704028e-48	2.366061e-46
MsaG007768	MsaG012046	0.817116	6.774991e-52	1.382295e-49
MsaG007768	MsaG012294	0.813497	4.281585e-51	7.969888e-49
MsaG007768	MsaG012489	0.827794	2.296157e-54	6.242961e-52
MsaG007768	MsaG012496	0.807021	1.051385e-49	1.671447e-47
MsaG007768	MsaG012562	0.806531	1.332949e-49	2.094784e-47
MsaG007768	MsaG013880	0.809051	3.906882e-50	6.520870e-48
MsaG007768	MsaG015722	0.803780	4.987448e-49	7.350363e-47
MsaG007768	MsaG016772	0.803382	6.027736e-49	8.802120e-47
MsaG007768	MsaG016974	0.834928	4.109468e-56	1.373589e-53
MsaG007768	MsaG017057	0.812651	6.550325e-51	1.193795e-48
MsaG007768	MsaG017051	0.811682	1.063281e-50	1.891986e-48
MsaG007768	MsaG017303	0.816681	8.474799e-52	1.709754e-49
MsaG007768	MsaG017286	0.819866	1.623286e-52	3.557497e-50
MsaG007768	MsaG017483	0.833293	1.051095e-55	3.346692e-53
MsaG007768	MsaG018035	0.802220	1.044352e-48	1.484810e-46
MsaG007768	MsaG018229	0.807207	9.610030e-50	1.534438e-47
MsaG007768	MsaG018598	0.832883	1.327993e-55	4.177721e-53
MsaG007768	MsaG018795	0.833078	1.188022e-55	3.758937e-53
MsaG007768	MsaG019183	0.823181	2.807971e-53	6.722427e-51
MsaG007768	MsaG019213	0.811989	9.123502e-51	1.635720e-48
MsaG007768	MsaG019275	0.848022	1.510939e-59	7.657783e-57
MsaG007768	MsaG019307	0.803419	5.920713e-49	8.653177e-47
MsaG007768	MsaG019308	0.847715	1.833185e-59	9.195152e-57
MsaG007768	MsaG019711	0.814962	2.039749e-51	3.939294e-49
MsaG007768	MsaG019721	0.814867	2.140784e-51	4.124488e-49
MsaG007768	MsaG020003	0.800915	1.928414e-48	2.661688e-46
MsaG007768	MsaG020288	0.808310	5.614199e-50	9.204671e-48
MsaG007768	MsaG021022	0.811321	1.272522e-50	2.244406e-48
MsaG007768	MsaG021222	0.805280	2.435086e-49	3.715773e-47
MsaG007768	MsaG021294	0.822458	4.129044e-53	9.693989e-51
MsaG007768	MsaG021650	0.803907	4.694602e-49	6.939127e-47
MsaG007768	MsaG021720	0.839473	2.861973e-57	1.098971e-54
MsaG007768	MsaG023376	0.848504	1.113405e-59	5.733945e-57
MsaG007768	MsaG023648	0.839960	2.141092e-57	8.347784e-55
MsaG007768	MsaG024480	0.812908	5.758445e-51	1.056237e-48
MsaG007768	MsaG024958	0.810664	1.763669e-50	3.060933e-48
MsaG007768	MsaG026961	0.828091	1.948773e-54	5.342750e-52
MsaG007768	MsaG026987	0.828814	1.306518e-54	3.655298e-52
MsaG007768	MsaG027505	0.830121	6.310472e-55	1.832630e-52
MsaG007768	MsaG027557	0.846318	4.407325e-59	2.109624e-56
MsaG007768	MsaG027621	0.826392	4.953216e-54	1.294980e-51
MsaG007768	MsaG029091	0.802165	1.072159e-48	1.522420e-46
MsaG007768	MsaG029093	0.826032	6.026527e-54	1.559935e-51
MsaG007768	MsaG029307	0.818544	3.236674e-52	6.851239e-50
MsaG007768	MsaG029349	0.821509	6.834147e-53	1.564313e-50
MsaG007768	MsaG029422	0.830571	4.904371e-55	1.442649e-52
MsaG007768	MsaG029802	0.810292	2.119603e-50	3.645526e-48
MsaG007768	MsaG029919	0.808739	4.551842e-50	7.540792e-48
MsaG007768	MsaG030038	0.808075	6.298393e-50	1.026822e-47
MsaG007768	MsaG030070	0.803005	7.207316e-49	1.043336e-46
MsaG007768	MsaG030396	0.816556	9.036238e-52	1.817179e-49
MsaG007768	MsaG032279	0.833904	7.406364e-56	2.400968e-53
MsaG007768	MsaG033231	0.820485	1.173260e-52	2.613801e-50
MsaG007768	MsaG033625	0.810846	1.611398e-50	2.809182e-48
MsaG007768	MsaG034590	0.837073	1.180694e-56	4.209251e-54
MsaG007768	MsaG035743	0.824868	1.133156e-53	2.840208e-51
MsaG007768	MsaG038749	0.811953	9.288801e-51	1.663923e-48
MsaG007768	MsaG040095	0.806453	1.384456e-49	2.171762e-47
MsaG007768	MsaG040598	0.821528	6.767902e-53	1.549917e-50
MsaG007768	MsaG040728	0.800943	1.902968e-48	2.628271e-46
MsaG007768	MsaG041670	0.801736	1.311925e-48	1.844807e-46
MsaG007768	MsaG041717	0.804809	3.052471e-49	4.607301e-47
MsaG007768	MsaG043788	0.824843	1.148567e-53	2.876864e-51
MsaG007768	MsaG043882	0.823147	2.859573e-53	6.839658e-51
MsaG007768	MsaG044516	0.807048	1.037795e-49	1.650871e-47
MsaG007768	MsaG044546	0.823606	2.236734e-53	5.417148e-51
MsaG007768	MsaG044864	0.810886	1.580049e-50	2.757164e-48
MsaG007768	MsaG044916	0.802712	8.280823e-49	1.190642e-46
MsaG007768	MsaG044918	0.820418	1.215102e-52	2.702258e-50
MsaG007768	MsaG044957	0.800145	2.763506e-48	3.748571e-46
MsaG007768	MsaG045428	0.808494	5.131215e-50	8.450321e-48
MsaG007768	MsaG045568	0.814693	2.339059e-51	4.486620e-49
MsaG007768	MsaG045820	0.826409	4.906251e-54	1.283317e-51
MsaG007768	MsaG045975	0.806272	1.510923e-49	2.360003e-47
MsaG007768	MsaG045986	0.815322	1.698053e-51	3.309353e-49
MsaG007768	MsaG046028	0.813574	4.119379e-51	7.682896e-49
MsaG007768	MsaG046054	0.833898	7.433076e-56	2.409142e-53
MsaG007768	MsaG046104	0.800381	2.475099e-48	3.375429e-46
MsaG007768	MsaG046540	0.823313	2.616317e-53	6.286155e-51
MsaG007768	MsaG046660	0.819429	2.041129e-52	4.422055e-50
MsaG007768	MsaG046754	0.817194	6.508368e-52	1.330569e-49
MsaG007768	MsaG046780	0.844772	1.151058e-58	5.235286e-56
MsaG007768	MsaG046972	0.802177	1.066044e-48	1.514142e-46
MsaG007768	MsaG047011	0.850347	3.430389e-60	1.881332e-57
MsaG007768	MsaG047077	0.811850	9.777923e-51	1.747109e-48
MsaG007768	MsaG001950	0.811818	9.934900e-51	1.773767e-48
MsaG007768	MsaG001966	0.812084	8.700632e-51	1.563481e-48
MsaG007768	MsaG002954	0.812794	6.096729e-51	1.115100e-48
MsaG007768	MsaG009513	0.819081	2.447365e-52	5.253937e-50
MsaG007768	MsaG013546	0.827485	2.720936e-54	7.333847e-52
MsaG007768	MsaG014164	0.840486	1.562600e-57	6.193803e-55
MsaG007768	MsaG012272	0.813229	4.901419e-51	9.062835e-49
MsaG007768	MsaG013252	0.869466	6.153273e-66	6.972682e-63
MsaG007768	MsaG022288	0.801281	1.624300e-48	2.260565e-46
MsaG007768	MsaG018939	0.826141	5.680380e-54	1.474785e-51
MsaG007768	MsaG028121	0.807601	7.932624e-50	1.278591e-47
MsaG007768	MsaG028782	0.813144	5.113643e-51	9.435134e-49
MsaG007768	MsaG030607	0.812665	6.504338e-51	1.185828e-48
MsaG007768	MsaG031625	0.835807	2.470936e-56	8.478892e-54
MsaG007768	MsaG031964	0.835557	2.856477e-56	9.729408e-54
MsaG007768	MsaG029994	0.829345	9.726376e-55	2.762466e-52
MsaG007768	MsaG030837	0.822402	4.255670e-53	9.976172e-51
MsaG007768	MsaG032683	0.816490	9.346617e-52	1.876460e-49
MsaG007768	MsaG031638	0.817451	5.699724e-52	1.172980e-49
MsaG007768	MsaG033449	0.800271	2.605573e-48	3.544429e-46
MsaG007768	MsaG033259	0.812594	6.740784e-51	1.226797e-48
MsaG007768	MsaG036736	0.808741	4.546754e-50	7.532795e-48
MsaG007768	MsaG035501	0.802540	8.980111e-49	1.286191e-46
MsaG007768	MsaG036866	0.827364	2.908032e-54	7.811779e-52
MsaG007768	MsaG038591	0.832094	2.078731e-55	6.391466e-53
MsaG007768	MsaG037725	0.805078	2.683693e-49	4.075981e-47
MsaG007768	MsaG037051	0.807958	6.668448e-50	1.084101e-47
MsaG007768	MsaG037447	0.805896	1.810870e-49	2.803383e-47
MsaG007768	MsaG035795	0.820732	1.029896e-52	2.309342e-50
MsaG007768	MsaG035418	0.806888	1.121347e-49	1.777066e-47
MsaG007768	MsaG041852	0.817940	4.426865e-52	9.225730e-50
MsaG007768	MsaG047025	0.828557	1.506053e-54	4.183473e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007768	MtrunA17_Chr2g0296191	93.680	269	17	0	28	296	242	510	2.68e-176	515
MsaG007768	MtrunA17_Chr2g0296191	60.000	290	105	3	18	296	708	997	6.10e-111	345
MsaG007768	MtrunA17_Chr2g0296251	63.487	304	97	4	3	295	97	397	3.31e-128	371
MsaG007768	MtrunA17_Chr2g0296221	61.386	303	106	3	18	309	125	427	6.01e-127	369
MsaG007768	MtrunA17_Chr2g0296721	60.396	303	112	2	18	312	96	398	5.69e-126	365
MsaG007768	MtrunA17_Chr2g0315731	64.184	282	98	1	34	312	138	419	6.05e-125	363
MsaG007768	MtrunA17_Chr2g0296711	57.895	304	119	2	18	312	99	402	5.39e-124	362
MsaG007768	MtrunA17_Chr2g0296741	57.190	306	122	2	16	312	114	419	3.43e-122	357
MsaG007768	MtrunA17_Chr2g0296291	56.347	323	103	2	28	312	92	414	1.46e-118	347
MsaG007768	MtrunA17_Chr2g0296231	56.623	302	120	3	19	311	96	395	1.02e-116	342
MsaG007768	MtrunA17_Chr2g0296171	57.093	289	113	3	18	295	106	394	3.26e-109	323
MsaG007768	MtrunA17_Chr2g0296181	55.298	302	99	4	18	310	97	371	1.72e-103	308
MsaG007768	MtrunA17_Chr2g0296151	49.831	295	142	1	16	304	84	378	9.12e-102	303
MsaG007768	MtrunA17_Chr2g0295741	50.167	299	143	1	16	308	90	388	3.80e-99	297
MsaG007768	MtrunA17_Chr2g0296111	51.178	297	136	3	16	304	83	378	1.05e-94	285
MsaG007768	MtrunA17_Chr2g0296121	48.148	297	148	1	18	308	172	468	1.18e-92	283
MsaG007768	MtrunA17_Chr2g0296551	66.332	199	67	0	113	311	1	199	1.33e-92	273
MsaG007768	MtrunA17_Chr4g0067121	51.799	278	134	0	27	304	111	388	1.35e-91	278
MsaG007768	MtrunA17_Chr2g0296211	68.817	186	58	0	125	310	187	372	6.31e-89	270
MsaG007768	MtrunA17_Chr2g0296301	44.521	292	155	2	28	312	96	387	9.30e-89	270
MsaG007768	MtrunA17_Chr2g0295731	45.695	302	136	4	16	300	91	381	1.98e-88	269
MsaG007768	MtrunA17_Chr2g0296701	71.930	171	48	0	142	312	2	172	3.12e-85	254
MsaG007768	MtrunA17_Chr2g0295761	48.110	291	144	2	16	299	102	392	3.74e-84	258
MsaG007768	MtrunA17_Chr4g0067141	44.788	259	143	0	36	294	112	370	3.46e-70	222
MsaG007768	MtrunA17_Chr4g0067671	41.852	270	151	1	16	279	86	355	4.94e-67	213
MsaG007768	MtrunA17_Chr2g0286191	42.361	288	156	4	16	295	73	358	8.62e-66	211
MsaG007768	MtrunA17_Chr2g0296751	66.897	145	47	1	168	312	1	144	3.58e-64	200
MsaG007768	MtrunA17_Chr2g0296131	56.627	166	72	0	143	308	9	174	1.03e-63	199
MsaG007768	MtrunA17_Chr2g0296161	50.588	170	84	0	140	309	2	171	1.49e-58	186
MsaG007768	MtrunA17_Chr2g0295721	60.360	111	44	0	140	250	2	112	1.97e-43	145
MsaG007768	MtrunA17_Chr2g0286221	43.558	163	90	2	139	301	14	174	1.74e-38	134
MsaG007768	MtrunA17_Chr4g0001831	30.717	293	186	7	16	294	79	368	3.20e-30	117
MsaG007768	MtrunA17_Chr8g0377801	25.993	277	200	3	21	294	111	385	2.77e-24	101
MsaG007768	MtrunA17_Chr8g0377781	27.099	262	188	2	32	290	107	368	3.67e-22	95.5
MsaG007768	MtrunA17_Chr4g0067131	45.679	81	44	0	212	292	1	81	9.45e-19	79.3
MsaG007768	MtrunA17_Chr2g0295711	37.963	108	57	3	16	115	90	195	6.20e-13	66.6
MsaG007768	MtrunA17_Chr4g0067681	47.541	61	32	0	201	261	1	61	9.24e-13	62.4
MsaG007768	MtrunA17_Chr2g0295751	42.683	82	41	1	16	91	91	172	9.52e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG007768	AT5G07900.1	32.342	269	174	4	32	293	132	399	3.48e-41	148
MsaG007768	AT1G21150.3	28.727	275	190	3	28	296	79	353	7.35e-33	124
MsaG007768	AT1G21150.1	28.727	275	190	3	28	296	115	389	1.66e-32	124
MsaG007768	AT1G21150.2	28.727	275	190	3	28	296	179	453	3.21e-32	124
MsaG007768	AT1G61970.2	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.7	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.6	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.3	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.5	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.4	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT1G61970.1	29.808	312	166	9	16	279	93	399	3.05e-23	99.4
MsaG007768	AT5G64950.1	28.571	273	173	6	39	294	109	376	9.15e-23	97.8
MsaG007768	AT1G61980.3	28.155	309	175	7	16	279	93	399	1.24e-22	97.8
MsaG007768	AT1G61980.2	28.155	309	175	7	16	279	93	399	1.24e-22	97.8
MsaG007768	AT1G61980.1	28.155	309	175	7	16	279	93	399	1.24e-22	97.8
MsaG007768	AT1G61990.2	26.074	326	189	7	16	296	93	411	1.82e-21	94.4
MsaG007768	AT1G61990.1	26.074	326	189	7	16	296	93	411	1.82e-21	94.4
MsaG007768	AT1G62010.1	26.299	308	180	6	16	279	79	383	1.99e-20	91.3
MsaG007768	AT3G46950.1	24.691	324	162	9	32	280	115	431	9.92e-18	83.6
MsaG007768	AT1G62120.1	26.490	302	167	8	23	279	114	405	1.90e-17	82.8
MsaG007768	AT1G62110.1	28.033	239	154	6	16	239	93	328	9.59e-16	77.8
MsaG007768	AT1G61960.1	28.846	208	128	5	16	209	93	294	6.18e-15	75.5
MsaG007768	AT1G62085.1	31.579	209	120	7	16	208	96	297	1.89e-14	73.9
MsaG007768	AT1G62085.2	31.579	209	120	7	16	208	96	297	1.89e-14	73.9
MsaG007768	AT1G62150.1	28.571	217	130	6	7	208	94	300	4.20e-13	70.1

Find 56 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACTATTCTGTAAAATTCT+AGG	0.190911	2:-22685989	None:intergenic
TTCAATTGATAAGATTAATT+TGG	0.211307	2:+22686414	MsaT007768.1:CDS
TTGGAGGAAGTTAAGGGTTT+AGG	0.213631	2:+22686232	MsaT007768.1:CDS
GACCCTTCAACTTCAACTTT+TGG	0.225478	2:+22686259	MsaT007768.1:CDS
TGGAGGAAGTTAAGGGTTTA+GGG	0.238470	2:+22686233	MsaT007768.1:CDS
ATTCTTCGGCACTTTCTAAA+AGG	0.266057	2:+22686470	MsaT007768.1:CDS
AGATTATGAAGTCACCTATT+TGG	0.280909	2:-22686737	None:intergenic
GTTAAGTTATTGATTGACTA+TGG	0.285651	2:+22686133	MsaT007768.1:CDS
ACCAGGGATTGAAACCCTTT+TGG	0.291942	2:-22685094	None:intergenic
TAGTACTTTGGAGGAAGTTA+AGG	0.340131	2:+22686225	MsaT007768.1:CDS
CCCAAAAGGGTTTCAATCCC+TGG	0.352735	2:+22685093	MsaT007768.1:CDS
TGACATGCCATTCACCAAAT+AGG	0.363432	2:+22686723	MsaT007768.1:CDS
TTAGTTACAGTTTGCAGAAA+AGG	0.377592	2:+22686503	MsaT007768.1:CDS
TGAACCGTTTGCTCCGTCTA+AGG	0.377750	2:+22686597	MsaT007768.1:CDS
CTTTGGAAGAATTGAATTGT+GGG	0.379663	2:-22685903	None:intergenic
GATGTTATTCGTGCATTTAG+AGG	0.388931	2:+22686370	MsaT007768.1:CDS
TTGACAAGACCAGCTATACT+TGG	0.394866	2:+22686187	MsaT007768.1:CDS
AATTGATTTCCTTAGTACTT+TGG	0.395237	2:+22686213	MsaT007768.1:CDS
TCAATTGGGTTGGAATTCTT+CGG	0.404558	2:+22686456	MsaT007768.1:CDS
AGTACTTTGGAGGAAGTTAA+GGG	0.430815	2:+22686226	MsaT007768.1:CDS
ATGTATGAGTAAAACACTTT+GGG	0.441511	2:+22686303	MsaT007768.1:CDS
GAAGTCACCTATTTGGTGAA+TGG	0.443693	2:-22686730	None:intergenic
TTCCTCAAACCTTTCATCAC+AGG	0.451862	2:-22686556	None:intergenic
AATGTATGAGTAAAACACTT+TGG	0.452530	2:+22686302	MsaT007768.1:CDS
TTCCTGTGATGAAAGGTTTG+AGG	0.465337	2:+22686554	MsaT007768.1:CDS
AACTGAGAACATATTTGCTT+AGG	0.466357	2:-22686627	None:intergenic
TTATTTATTAAAGCTTTATG+AGG	0.468070	2:+22686666	MsaT007768.1:CDS
TTAACAGTAGTAAGATTGTA+AGG	0.474106	2:-22686109	None:intergenic
CTGCAATTTCCTGTGATGAA+AGG	0.481186	2:+22686547	MsaT007768.1:CDS
AAGGATTGTTCCAAGGGCAT+TGG	0.488885	2:+22686522	MsaT007768.1:CDS
TCAATTGATCCAAGTATAGC+TGG	0.498779	2:-22686196	None:intergenic
TGATTTCCTTAGTACTTTGG+AGG	0.499163	2:+22686216	MsaT007768.1:CDS
CCACAAGGATCATAAGTTGA+TGG	0.500141	2:-22685148	None:intergenic
CTTAGGAACATTTCCTTAGA+CGG	0.503257	2:-22686610	None:intergenic
ACGGCCAATGAAAACCCAAA+AGG	0.504614	2:+22685079	None:intergenic
CGGCCAATGAAAACCCAAAA+GGG	0.509267	2:+22685080	None:intergenic
ATTGAAGTCAACAACAAGTC+AGG	0.516236	2:-22686397	None:intergenic
TAACTTCCTCCAAAGTACTA+AGG	0.517307	2:-22686222	None:intergenic
ACTTTGGAAGAATTGAATTG+TGG	0.522321	2:-22685904	None:intergenic
ATTTCCTTAGACGGAGCAAA+CGG	0.526804	2:-22686601	None:intergenic
TTTGGGTTAATCAATTGGGT+TGG	0.527975	2:+22686446	MsaT007768.1:CDS
AGCAAACGGTTCAACTAAGC+TGG	0.533205	2:-22686587	None:intergenic
GACCCAAAAGTTGAAGTTGA+AGG	0.537017	2:-22686262	None:intergenic
AATTGCAGAACCAATGCCCT+TGG	0.540852	2:-22686532	None:intergenic
TGCAGAAAAGGATTGTTCCA+AGG	0.541911	2:+22686515	MsaT007768.1:CDS
GCAGAAAAGGATTGTTCCAA+GGG	0.547363	2:+22686516	MsaT007768.1:CDS
AGAGAATTCATGTGAAAACC+AGG	0.560693	2:-22685111	None:intergenic
ACCCAAAAGTTGAAGTTGAA+GGG	0.582729	2:-22686261	None:intergenic
CAAAAGCAATCTAGCAATAG+CGG	0.586332	2:-22686167	None:intergenic
TCAACTTATGATCCTTGTGG+TGG	0.587243	2:+22685151	MsaT007768.1:CDS
ATGATCCTTGTGGTGGATTG+CGG	0.607856	2:+22685158	MsaT007768.1:CDS
CCATCAACTTATGATCCTTG+TGG	0.634672	2:+22685148	MsaT007768.1:CDS
CATGTCAATGTTCTCCTCAG+TGG	0.650724	2:-22686707	None:intergenic
GAGAATTCATGTGAAAACCA+GGG	0.658766	2:-22685110	None:intergenic
CCTTACCGCAATCCACCACA+AGG	0.671980	2:-22685163	None:intergenic
CGTAAATCTTGCATCCACTG+AGG	0.719555	2:+22686693	MsaT007768.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	22685086	22686744	22685086	ID=MsaG007768
Chr2	mRNA	22685086	22686744	22685086	ID=MsaT007768.1;Parent=MsaG007768
Chr2	exon	22685086	22685179	22685086	ID=MsaT007768.1.exon1;Parent=MsaT007768.1
Chr2	CDS	22685086	22685179	22685086	ID=cds.MsaT007768.1;Parent=MsaT007768.1
Chr2	exon	22685900	22686744	22685900	ID=MsaT007768.1.exon2;Parent=MsaT007768.1
Chr2	CDS	22685900	22686744	22685900	ID=cds.MsaT007768.1;Parent=MsaT007768.1

Gene Sequence

>MsaT007768.1

ATGAAAACCCAAAAGGGTTTCAATCCCTGGTTTTCACATGAATTCTCTTTTGGATATGCTCACCATCAACTTATGATCCTTGTGGTGGATTGCGATACCCACAATTCAATTCTTCCAAAGTTTCAATTTTTTCTATCTAAAGGCGCTTCAGCTTCTGAAATCGCGTGTTTGTTAGCAGCGAATCCTAGAATTTTACAGAATAGTTTGGAGAATAGAATAATTCCTCTTTTTGAATTTTATAAGAGGTTTTTTAAATCTGATAAAGCTACAATTTGTTGCATCATTCGAAATTTGATATCTTTGCCTTACAATCTTACTACTGTTAATGTTAAGTTATTGATTGACTATGGAGTTTGTGATTCCGCTATTGCTAGATTGCTTTTGACAAGACCAGCTATACTTGGATCAATTGATTTCCTTAGTACTTTGGAGGAAGTTAAGGGTTTAGGGTTTGACCCTTCAACTTCAACTTTTGGGTCAGCTTTGGTTGCAAAGAAATGTATGAGTAAAACACTTTGGGATGAGAAAGTTGATGTTTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTATTCGTGCATTTAGAGGTCGTCCTGACTTGTTGTTGACTTCAATTGATAAGATTAATTTGGTGTTGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCTTCGGCACTTTCTAAAAGGCCACGTATTTTTAGTTACAGTTTGCAGAAAAGGATTGTTCCAAGGGCATTGGTTCTGCAATTTCCTGTGATGAAAGGTTTGAGGAAAAAGAATGCCAGCTTAGTTGAACCGTTTGCTCCGTCTAAGGAAATGTTCCTAAGCAAATATGTTCTCAGTTTTAAGGAGGATTCTGATTATTTATTAAAGCTTTATGAGGAAAACGTAAATCTTGCATCCACTGAGGAGAACATTGACATGCCATTCACCAAATAG

Protein sequence

>MsaT007768.1

MKTQKGFNPWFSHEFSFGYAHHQLMILVVDCDTHNSILPKFQFFLSKGASASEIACLLAANPRILQNSLENRIIPLFEFYKRFFKSDKATICCIIRNLISLPYNLTTVNVKLLIDYGVCDSAIARLLLTRPAILGSIDFLSTLEEVKGLGFDPSTSTFGSALVAKKCMSKTLWDEKVDVFKKWGWSDEDVIRAFRGRPDLLLTSIDKINLVLSFWVNQLGWNSSALSKRPRIFSYSLQKRIVPRALVLQFPVMKGLRKKNASLVEPFAPSKEMFLSKYVLSFKEDSDYLLKLYEENVNLASTEENIDMPFTK*