Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007795 | XP_024631484.1 | 80.339 | 295 | 56 | 1 | 4 | 296 | 123 | 417 | 3.61e-166 | 478 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007795 | tr|A0A072V7R4|A0A072V7R4_MEDTR | 76.897 | 290 | 64 | 2 | 9 | 296 | 163 | 451 | 3.46e-153 | 447 |
Gene ID | Type | Classification |
---|---|---|
MsaG007795 | TR | mTERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000045 | MsaG007795 | 0.800847 | 1.990410e-48 | 2.743100e-46 |
MsaG000439 | MsaG007795 | 0.837607 | 8.634396e-57 | 3.128716e-54 |
MsaG000450 | MsaG007795 | 0.805170 | 2.567595e-49 | 3.908147e-47 |
MsaG000534 | MsaG007795 | 0.818804 | 2.826623e-52 | 6.024042e-50 |
MsaG001558 | MsaG007795 | 0.807336 | 9.023743e-50 | 1.445290e-47 |
MsaG003327 | MsaG007795 | 0.823191 | 2.793193e-53 | 6.688860e-51 |
MsaG003461 | MsaG007795 | 0.805571 | 2.117329e-49 | 3.252852e-47 |
MsaG004146 | MsaG007795 | 0.806410 | 1.413153e-49 | 2.214528e-47 |
MsaG004185 | MsaG007795 | 0.807497 | 8.345687e-50 | 1.341843e-47 |
MsaG005058 | MsaG007795 | 0.812294 | 7.833229e-51 | 1.414964e-48 |
MsaG005201 | MsaG007795 | 0.806731 | 1.210311e-49 | 1.911005e-47 |
MsaG006217 | MsaG007795 | 0.803611 | 5.406855e-49 | 7.937139e-47 |
MsaG006225 | MsaG007795 | 0.801315 | 1.598523e-48 | 2.226451e-46 |
MsaG006257 | MsaG007795 | 0.815701 | 1.399985e-51 | 2.754761e-49 |
MsaG006943 | MsaG007795 | 0.811984 | 9.148133e-51 | 1.639915e-48 |
MsaG007072 | MsaG007795 | 0.803347 | 6.129357e-49 | 8.943125e-47 |
MsaG007600 | MsaG007795 | 0.823895 | 1.914889e-53 | 4.673908e-51 |
MsaG007626 | MsaG007795 | 0.803922 | 4.661447e-49 | 6.892635e-47 |
MsaG007684 | MsaG007795 | 0.815871 | 1.283675e-51 | 2.536750e-49 |
MsaG007795 | MsaG008112 | 0.821873 | 5.634817e-53 | 1.302337e-50 |
MsaG007795 | MsaG008250 | 0.811661 | 1.074263e-50 | 1.910562e-48 |
MsaG007795 | MsaG008434 | 0.806332 | 1.467779e-49 | 2.295831e-47 |
MsaG007795 | MsaG008631 | 0.806790 | 1.176009e-49 | 1.859417e-47 |
MsaG007795 | MsaG009140 | 0.802861 | 7.717250e-49 | 1.113414e-46 |
MsaG007795 | MsaG009206 | 0.835830 | 2.438610e-56 | 8.373808e-54 |
MsaG007795 | MsaG009785 | 0.800199 | 2.693980e-48 | 3.658712e-46 |
MsaG007795 | MsaG011018 | 0.819823 | 1.660779e-52 | 3.635364e-50 |
MsaG007795 | MsaG011044 | 0.808773 | 4.476817e-50 | 7.422350e-48 |
MsaG007795 | MsaG011256 | 0.823166 | 2.830079e-53 | 6.772573e-51 |
MsaG007795 | MsaG011248 | 0.808126 | 6.144032e-50 | 1.002883e-47 |
MsaG007795 | MsaG011405 | 0.817389 | 5.884428e-52 | 1.209066e-49 |
MsaG007795 | MsaG012169 | 0.806447 | 1.388095e-49 | 2.177196e-47 |
MsaG007795 | MsaG012736 | 0.806846 | 1.144539e-49 | 1.811999e-47 |
MsaG007795 | MsaG012772 | 0.805520 | 2.169875e-49 | 3.329608e-47 |
MsaG007795 | MsaG017115 | 0.810407 | 2.002807e-50 | 3.454446e-48 |
MsaG007795 | MsaG018135 | 0.802915 | 7.519384e-49 | 1.086241e-46 |
MsaG007795 | MsaG018373 | 0.809271 | 3.505834e-50 | 5.882322e-48 |
MsaG007795 | MsaG019007 | 0.815837 | 1.305888e-51 | 2.578474e-49 |
MsaG007795 | MsaG019191 | 0.806801 | 1.169900e-49 | 1.850210e-47 |
MsaG007795 | MsaG019571 | 0.833693 | 8.359867e-56 | 2.693416e-53 |
MsaG007795 | MsaG020421 | 0.825951 | 6.299213e-54 | 1.626863e-51 |
MsaG007795 | MsaG020718 | 0.802591 | 8.764986e-49 | 1.256854e-46 |
MsaG007795 | MsaG020787 | 0.819090 | 2.435512e-52 | 5.229789e-50 |
MsaG007795 | MsaG021106 | 0.803415 | 5.933360e-49 | 8.670823e-47 |
MsaG007795 | MsaG021423 | 0.808475 | 5.180384e-50 | 8.527330e-48 |
MsaG007795 | MsaG021467 | 0.801344 | 1.577418e-48 | 2.198474e-46 |
MsaG007795 | MsaG021469 | 0.802501 | 9.146691e-49 | 1.308863e-46 |
MsaG007795 | MsaG021477 | 0.820968 | 9.098245e-53 | 2.053003e-50 |
MsaG007795 | MsaG021485 | 0.829830 | 7.421844e-55 | 2.137527e-52 |
MsaG007795 | MsaG022116 | 0.805576 | 2.112734e-49 | 3.246115e-47 |
MsaG007795 | MsaG023119 | 0.806107 | 1.636357e-49 | 2.545851e-47 |
MsaG007795 | MsaG023704 | 0.828143 | 1.893418e-54 | 5.198801e-52 |
MsaG007795 | MsaG025282 | 0.806697 | 1.230134e-49 | 1.940797e-47 |
MsaG007795 | MsaG025492 | 0.806691 | 1.233983e-49 | 1.946568e-47 |
MsaG007795 | MsaG027026 | 0.808450 | 5.242868e-50 | 8.624821e-48 |
MsaG007795 | MsaG027087 | 0.807640 | 7.786198e-50 | 1.256142e-47 |
MsaG007795 | MsaG027359 | 0.802316 | 9.981251e-49 | 1.422287e-46 |
MsaG007795 | MsaG027383 | 0.801058 | 1.803119e-48 | 2.496784e-46 |
MsaG007795 | MsaG028091 | 0.802324 | 9.943922e-49 | 1.417223e-46 |
MsaG007795 | MsaG028250 | 0.808098 | 6.225852e-50 | 1.015582e-47 |
MsaG007795 | MsaG028487 | 0.809724 | 2.805235e-50 | 4.758743e-48 |
MsaG007795 | MsaG028568 | 0.803953 | 4.593165e-49 | 6.796582e-47 |
MsaG007795 | MsaG028634 | 0.804461 | 3.604725e-49 | 5.397036e-47 |
MsaG007795 | MsaG028825 | 0.814931 | 2.071866e-51 | 3.998189e-49 |
MsaG007795 | MsaG029459 | 0.801701 | 1.333870e-48 | 1.874155e-46 |
MsaG007795 | MsaG029482 | 0.830477 | 5.170320e-55 | 1.516768e-52 |
MsaG007795 | MsaG030267 | 0.806543 | 1.325450e-49 | 2.083572e-47 |
MsaG007795 | MsaG030804 | 0.800894 | 1.947588e-48 | 2.686870e-46 |
MsaG007795 | MsaG032404 | 0.801380 | 1.550826e-48 | 2.163193e-46 |
MsaG007795 | MsaG033312 | 0.815178 | 1.827646e-51 | 3.548893e-49 |
MsaG007795 | MsaG033688 | 0.818436 | 3.422549e-52 | 7.224469e-50 |
MsaG007795 | MsaG034308 | 0.826637 | 4.332291e-54 | 1.140355e-51 |
MsaG007795 | MsaG034418 | 0.803013 | 7.180162e-49 | 1.039601e-46 |
MsaG007795 | MsaG034851 | 0.808033 | 6.429078e-50 | 1.047084e-47 |
MsaG007795 | MsaG035317 | 0.801253 | 1.646189e-48 | 2.289547e-46 |
MsaG007795 | MsaG035675 | 0.818809 | 2.820069e-52 | 6.010811e-50 |
MsaG007795 | MsaG035700 | 0.801224 | 1.668235e-48 | 2.318704e-46 |
MsaG007795 | MsaG036022 | 0.803234 | 6.464582e-49 | 9.407925e-47 |
MsaG007795 | MsaG036577 | 0.800194 | 2.700198e-48 | 3.666783e-46 |
MsaG007795 | MsaG038043 | 0.816447 | 9.555730e-52 | 1.916285e-49 |
MsaG007795 | MsaG039418 | 0.804952 | 2.850682e-49 | 4.317013e-47 |
MsaG007795 | MsaG040474 | 0.801622 | 1.384174e-48 | 1.941362e-46 |
MsaG007795 | MsaG042510 | 0.803377 | 6.042530e-49 | 8.822652e-47 |
MsaG007795 | MsaG043881 | 0.809098 | 3.817896e-50 | 6.379610e-48 |
MsaG007795 | MsaG044319 | 0.806184 | 1.576594e-49 | 2.457385e-47 |
MsaG007795 | MsaG044880 | 0.815040 | 1.960081e-51 | 3.792829e-49 |
MsaG007795 | MsaG045392 | 0.809637 | 2.928256e-50 | 4.957039e-48 |
MsaG007795 | MsaG046930 | 0.808075 | 6.296844e-50 | 1.026592e-47 |
MsaG007795 | MsaG002433 | 0.801845 | 1.246166e-48 | 1.756712e-46 |
MsaG007795 | MsaG002307 | 0.807079 | 1.022543e-49 | 1.627790e-47 |
MsaG007795 | MsaG009163 | 0.800294 | 2.577379e-48 | 3.507918e-46 |
MsaG007795 | MsaG010555 | 0.825214 | 9.397069e-54 | 2.377770e-51 |
MsaG007795 | MsaG011837 | 0.804916 | 2.899576e-49 | 4.387425e-47 |
MsaG007795 | MsaG013008 | 0.810189 | 2.230459e-50 | 3.826545e-48 |
MsaG007795 | MsaG011633 | 0.822341 | 4.395815e-53 | 1.028816e-50 |
MsaG007795 | MsaG013071 | 0.806378 | 1.435646e-49 | 2.248011e-47 |
MsaG007795 | MsaG021945 | 0.808384 | 5.414395e-50 | 8.892877e-48 |
MsaG007795 | MsaG019592 | 0.812589 | 6.757647e-51 | 1.229721e-48 |
MsaG007795 | MsaG027643 | 0.808162 | 6.034677e-50 | 9.859102e-48 |
MsaG007795 | MsaG027453 | 0.801755 | 1.299894e-48 | 1.828709e-46 |
MsaG007795 | MsaG030982 | 0.806423 | 1.404207e-49 | 2.201207e-47 |
MsaG007795 | MsaG031225 | 0.810134 | 2.291733e-50 | 3.926401e-48 |
MsaG007795 | MsaG031808 | 0.801255 | 1.644171e-48 | 2.286878e-46 |
MsaG007795 | MsaG033182 | 0.803480 | 5.754227e-49 | 8.421584e-47 |
MsaG007795 | MsaG033058 | 0.819876 | 1.615410e-52 | 3.541063e-50 |
MsaG007795 | MsaG031222 | 0.811737 | 1.034761e-50 | 1.843706e-48 |
MsaG007795 | MsaG033283 | 0.820706 | 1.044171e-52 | 2.339687e-50 |
MsaG007795 | MsaG038618 | 0.803500 | 5.699788e-49 | 8.345733e-47 |
MsaG007795 | MsaG037217 | 0.817757 | 4.867589e-52 | 1.009602e-49 |
MsaG007795 | MsaG042525 | 0.807927 | 6.769656e-50 | 1.099777e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007795 | MtrunA17_Chr2g0296291 | 74.658 | 292 | 72 | 1 | 4 | 293 | 119 | 410 | 8.42e-153 | 434 |
MsaG007795 | MtrunA17_Chr2g0296251 | 77.737 | 274 | 59 | 1 | 10 | 281 | 125 | 398 | 7.45e-149 | 423 |
MsaG007795 | MtrunA17_Chr2g0296711 | 75.352 | 284 | 65 | 2 | 16 | 294 | 116 | 399 | 7.18e-148 | 421 |
MsaG007795 | MtrunA17_Chr2g0296221 | 76.364 | 275 | 61 | 2 | 24 | 294 | 153 | 427 | 3.03e-145 | 415 |
MsaG007795 | MtrunA17_Chr2g0296231 | 71.831 | 284 | 77 | 1 | 16 | 296 | 112 | 395 | 2.86e-143 | 409 |
MsaG007795 | MtrunA17_Chr2g0296171 | 76.336 | 262 | 58 | 2 | 24 | 281 | 134 | 395 | 6.43e-135 | 388 |
MsaG007795 | MtrunA17_Chr2g0315731 | 71.273 | 275 | 77 | 1 | 24 | 296 | 144 | 418 | 4.22e-134 | 386 |
MsaG007795 | MtrunA17_Chr2g0296741 | 67.133 | 286 | 89 | 2 | 16 | 296 | 133 | 418 | 6.31e-132 | 381 |
MsaG007795 | MtrunA17_Chr2g0296721 | 70.545 | 275 | 78 | 2 | 24 | 296 | 124 | 397 | 6.91e-131 | 377 |
MsaG007795 | MtrunA17_Chr2g0296191 | 74.131 | 259 | 63 | 2 | 24 | 278 | 736 | 994 | 1.04e-124 | 380 |
MsaG007795 | MtrunA17_Chr2g0296191 | 64.130 | 276 | 93 | 3 | 8 | 280 | 237 | 509 | 2.85e-110 | 342 |
MsaG007795 | MtrunA17_Chr2g0296181 | 67.018 | 285 | 62 | 4 | 16 | 295 | 114 | 371 | 1.65e-119 | 348 |
MsaG007795 | MtrunA17_Chr2g0296551 | 81.910 | 199 | 34 | 1 | 100 | 296 | 1 | 199 | 8.66e-114 | 326 |
MsaG007795 | MtrunA17_Chr2g0296151 | 53.676 | 272 | 121 | 2 | 24 | 293 | 114 | 382 | 1.32e-97 | 292 |
MsaG007795 | MtrunA17_Chr2g0295741 | 54.044 | 272 | 120 | 2 | 24 | 293 | 120 | 388 | 5.60e-96 | 288 |
MsaG007795 | MtrunA17_Chr2g0296111 | 54.945 | 273 | 109 | 4 | 24 | 289 | 113 | 378 | 4.04e-94 | 283 |
MsaG007795 | MtrunA17_Chr2g0296211 | 66.990 | 206 | 63 | 2 | 95 | 295 | 167 | 372 | 5.56e-91 | 275 |
MsaG007795 | MtrunA17_Chr2g0295731 | 52.273 | 264 | 121 | 3 | 24 | 285 | 121 | 381 | 1.42e-89 | 271 |
MsaG007795 | MtrunA17_Chr2g0296701 | 78.235 | 170 | 35 | 1 | 129 | 296 | 2 | 171 | 1.60e-89 | 264 |
MsaG007795 | MtrunA17_Chr2g0296121 | 50.000 | 272 | 131 | 2 | 24 | 293 | 200 | 468 | 2.56e-87 | 268 |
MsaG007795 | MtrunA17_Chr4g0067121 | 48.881 | 268 | 132 | 3 | 24 | 289 | 124 | 388 | 7.34e-84 | 257 |
MsaG007795 | MtrunA17_Chr2g0296301 | 45.725 | 269 | 139 | 4 | 24 | 288 | 108 | 373 | 2.71e-77 | 240 |
MsaG007795 | MtrunA17_Chr2g0296751 | 79.167 | 144 | 27 | 2 | 155 | 296 | 1 | 143 | 5.35e-76 | 229 |
MsaG007795 | MtrunA17_Chr2g0295761 | 48.473 | 262 | 129 | 3 | 24 | 282 | 132 | 390 | 1.38e-70 | 223 |
MsaG007795 | MtrunA17_Chr4g0067671 | 45.306 | 245 | 131 | 1 | 24 | 268 | 116 | 357 | 1.03e-66 | 212 |
MsaG007795 | MtrunA17_Chr2g0296131 | 59.524 | 168 | 62 | 2 | 130 | 293 | 9 | 174 | 2.01e-64 | 200 |
MsaG007795 | MtrunA17_Chr4g0067141 | 44.186 | 258 | 139 | 3 | 24 | 279 | 116 | 370 | 5.29e-64 | 206 |
MsaG007795 | MtrunA17_Chr2g0296161 | 54.971 | 171 | 75 | 1 | 126 | 294 | 1 | 171 | 2.03e-62 | 195 |
MsaG007795 | MtrunA17_Chr2g0286191 | 45.318 | 267 | 127 | 7 | 24 | 281 | 103 | 359 | 7.66e-61 | 197 |
MsaG007795 | MtrunA17_Chr2g0295721 | 61.947 | 113 | 43 | 0 | 126 | 238 | 1 | 113 | 2.66e-45 | 149 |
MsaG007795 | MtrunA17_Chr2g0286221 | 51.282 | 156 | 72 | 3 | 128 | 281 | 16 | 169 | 4.30e-41 | 140 |
MsaG007795 | MtrunA17_Chr8g0377801 | 30.000 | 260 | 176 | 3 | 24 | 279 | 128 | 385 | 4.98e-28 | 111 |
MsaG007795 | MtrunA17_Chr4g0001831 | 31.600 | 250 | 159 | 6 | 24 | 266 | 109 | 353 | 1.76e-27 | 109 |
MsaG007795 | MtrunA17_Chr8g0377781 | 30.078 | 256 | 173 | 4 | 24 | 275 | 115 | 368 | 1.09e-24 | 102 |
MsaG007795 | MtrunA17_Chr4g0067131 | 50.617 | 81 | 38 | 1 | 199 | 277 | 1 | 81 | 6.25e-20 | 82.4 |
MsaG007795 | MtrunA17_Chr4g0067681 | 50.000 | 62 | 31 | 0 | 188 | 249 | 1 | 62 | 4.72e-14 | 65.9 |
MsaG007795 | MtrunA17_Chr2g0295711 | 50.746 | 67 | 32 | 1 | 24 | 90 | 120 | 185 | 8.06e-14 | 68.9 |
MsaG007795 | MtrunA17_Chr2g0295751 | 58.182 | 55 | 23 | 0 | 24 | 78 | 121 | 175 | 5.07e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG007795 | AT5G07900.1 | 33.077 | 260 | 169 | 3 | 24 | 278 | 140 | 399 | 2.14e-39 | 142 |
MsaG007795 | AT1G21150.3 | 30.153 | 262 | 179 | 3 | 11 | 268 | 77 | 338 | 1.05e-29 | 115 |
MsaG007795 | AT1G21150.1 | 30.153 | 262 | 179 | 3 | 11 | 268 | 113 | 374 | 1.79e-29 | 115 |
MsaG007795 | AT1G21150.2 | 30.153 | 262 | 179 | 3 | 11 | 268 | 177 | 438 | 4.19e-29 | 115 |
MsaG007795 | AT5G64950.1 | 27.907 | 258 | 168 | 4 | 24 | 268 | 110 | 362 | 2.13e-24 | 102 |
MsaG007795 | AT1G61990.2 | 26.667 | 285 | 160 | 6 | 24 | 269 | 123 | 397 | 4.38e-20 | 90.1 |
MsaG007795 | AT1G61990.1 | 26.667 | 285 | 160 | 6 | 24 | 269 | 123 | 397 | 4.38e-20 | 90.1 |
MsaG007795 | AT1G61980.3 | 26.897 | 290 | 168 | 7 | 24 | 274 | 123 | 407 | 2.33e-18 | 85.1 |
MsaG007795 | AT1G61980.2 | 26.897 | 290 | 168 | 7 | 24 | 274 | 123 | 407 | 2.33e-18 | 85.1 |
MsaG007795 | AT1G61980.1 | 26.897 | 290 | 168 | 7 | 24 | 274 | 123 | 407 | 2.33e-18 | 85.1 |
MsaG007795 | AT1G61970.2 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.7 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.6 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.3 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.5 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.4 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G61970.1 | 25.442 | 283 | 165 | 8 | 24 | 266 | 123 | 399 | 3.72e-17 | 81.6 |
MsaG007795 | AT1G62120.1 | 26.370 | 292 | 171 | 6 | 24 | 275 | 127 | 414 | 1.15e-15 | 77.4 |
MsaG007795 | AT1G62110.1 | 29.282 | 181 | 120 | 3 | 19 | 195 | 118 | 294 | 2.08e-12 | 67.8 |
MsaG007795 | AT3G46950.1 | 28.729 | 181 | 121 | 4 | 19 | 198 | 118 | 291 | 9.92e-12 | 65.5 |
MsaG007795 | AT1G62150.1 | 30.000 | 170 | 111 | 3 | 30 | 195 | 135 | 300 | 3.56e-11 | 63.9 |
Find 55 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAATTTGGTGGCTGATTT+TGG | 0.113704 | 2:-23058037 | MsaT007795.1:CDS |
GCCATCTATATTTGGTTTAA+AGG | 0.141804 | 2:-23057975 | MsaT007795.1:CDS |
CAGTCAAGGCCATCTATATT+TGG | 0.179813 | 2:-23057983 | MsaT007795.1:CDS |
GATCCTTCGTTGACTACTTT+TGG | 0.192467 | 2:-23057911 | MsaT007795.1:CDS |
TTGGAGGAAGTTAAGGGTTT+AGG | 0.192505 | 2:-23057938 | MsaT007795.1:CDS |
TGGAGGAAGTTAAGGGTTTA+GGG | 0.236533 | 2:-23057937 | MsaT007795.1:CDS |
AAACTATAACAAAACATATT+TGG | 0.239296 | 2:+23057677 | None:intergenic |
TATTGTGGCTAATATCAATT+TGG | 0.259534 | 2:-23058050 | MsaT007795.1:CDS |
AGACCAACCCCATTTCTTAA+AGG | 0.307244 | 2:+23057829 | None:intergenic |
TTTGTTATAGTTTACATAAA+AGG | 0.315414 | 2:-23057667 | MsaT007795.1:CDS |
GCAGAGAATGGTGTCCTTGC+TGG | 0.321424 | 2:+23058117 | None:intergenic |
CTTGAGCAAGTTTGTCTTGA+AGG | 0.325723 | 2:-23057543 | MsaT007795.1:CDS |
TCTCTGCTTAATTCGATATT+CGG | 0.329319 | 2:-23058101 | MsaT007795.1:CDS |
AAAGGATTTGATTAAGTCAT+TGG | 0.335353 | 2:-23057957 | MsaT007795.1:CDS |
AAACTAATCTGTAAAATTGC+AGG | 0.337554 | 2:+23058190 | None:intergenic |
TGTAGGTAACCCTAAGTTCT+TGG | 0.343348 | 2:-23058305 | MsaT007795.1:intron |
AAGCTTAATTCCAAGAACTT+AGG | 0.347303 | 2:+23058295 | None:intergenic |
AAGTTGATACCTTTAAGAAA+TGG | 0.365182 | 2:-23057838 | MsaT007795.1:CDS |
AGTTGATACCTTTAAGAAAT+GGG | 0.365271 | 2:-23057837 | MsaT007795.1:CDS |
ATTGAAGCCAACATCAAATT+AGG | 0.374513 | 2:+23057773 | None:intergenic |
ATATCTTCAGAATAAGTAAA+TGG | 0.375368 | 2:+23057569 | None:intergenic |
TAAGTCATTGGAGGAAGTTA+AGG | 0.377755 | 2:-23057945 | MsaT007795.1:CDS |
AATTGATATTAGCCACAATA+AGG | 0.390705 | 2:+23058053 | None:intergenic |
AGCTTAATTCCAAGAACTTA+GGG | 0.393617 | 2:+23058296 | None:intergenic |
ATCAGATGAAGAAGCGCCTT+TGG | 0.403170 | 2:+23058237 | None:intergenic |
TCCTTTAAACCAAATATAGA+TGG | 0.404648 | 2:+23057974 | None:intergenic |
TTACATAAAAGGATCATTCC+AGG | 0.411963 | 2:-23057656 | MsaT007795.1:CDS |
TCAATTAGGTTGGGATTCCT+TGG | 0.416390 | 2:-23057714 | MsaT007795.1:CDS |
TTGGGTCAATCAATTAGGTT+GGG | 0.436055 | 2:-23057723 | MsaT007795.1:CDS |
AAGTCATTGGAGGAAGTTAA+GGG | 0.441441 | 2:-23057944 | MsaT007795.1:CDS |
AATTGCAAAACTGAGGCTCC+TGG | 0.473795 | 2:+23057638 | None:intergenic |
GAAATCACATATTAAGTGAA+TGG | 0.476870 | 2:+23057446 | None:intergenic |
TTTGGGTCAATCAATTAGGT+TGG | 0.477232 | 2:-23057724 | MsaT007795.1:CDS |
GTTGCTTTGGTAGCCAAGAA+AGG | 0.483813 | 2:-23057887 | MsaT007795.1:CDS |
AACTAATCTGTAAAATTGCA+GGG | 0.522503 | 2:+23058191 | None:intergenic |
ATATCAGCCTAATTTGATGT+TGG | 0.524802 | 2:-23057780 | MsaT007795.1:CDS |
ATTAGCCACAATAAGGCGAT+AGG | 0.536156 | 2:+23058060 | None:intergenic |
TTGCTAGTTTGCTTCAGTCA+AGG | 0.547608 | 2:-23057997 | MsaT007795.1:CDS |
TGTGGCTAATATCAATTTGG+TGG | 0.549748 | 2:-23058047 | MsaT007795.1:CDS |
TGGAAATTTAGCAAGTGCCA+AGG | 0.550727 | 2:+23057697 | None:intergenic |
GTTGATACCTTTAAGAAATG+GGG | 0.553181 | 2:-23057836 | MsaT007795.1:CDS |
GGATTTGATTAAGTCATTGG+AGG | 0.561173 | 2:-23057954 | MsaT007795.1:CDS |
TGCGCCGCTGAACTCTCCAT+TGG | 0.570549 | 2:-23059694 | MsaT007795.1:intron |
ATATCGAATTAAGCAGAGAA+TGG | 0.572002 | 2:+23058105 | None:intergenic |
AAATCCCTATCGCCTTATTG+TGG | 0.576235 | 2:-23058065 | MsaT007795.1:CDS |
ATACCTTTAAGAAATGGGGT+TGG | 0.587688 | 2:-23057832 | MsaT007795.1:CDS |
GAGCAAGTTTGTCTTGAAGG+AGG | 0.590871 | 2:-23057540 | MsaT007795.1:CDS |
TAGGTTCTTTAATTCCAGCA+AGG | 0.604223 | 2:-23058131 | MsaT007795.1:CDS |
TTAGCCACAATAAGGCGATA+GGG | 0.609256 | 2:+23058061 | None:intergenic |
CAAAAGAAATTGCAAAACTG+AGG | 0.625549 | 2:+23057631 | None:intergenic |
GTTACCAATGGAGAGTTCAG+CGG | 0.658433 | 2:+23059690 | None:intergenic |
AATGAAACTTGCATACACAA+AGG | 0.663379 | 2:-23057483 | MsaT007795.1:CDS |
CTATCTATTAAAGTTATACG+AGG | 0.674399 | 2:-23057510 | MsaT007795.1:CDS |
ACCCCAAAAGTAGTCAACGA+AGG | 0.684823 | 2:+23057908 | None:intergenic |
GCATACACAAAGGAGAACAA+TGG | 0.692068 | 2:-23057473 | MsaT007795.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 23057457 | 23059719 | 23057457 | ID=MsaG007795 |
Chr2 | mRNA | 23057457 | 23059719 | 23057457 | ID=MsaT007795.1;Parent=MsaG007795 |
Chr2 | exon | 23057457 | 23058322 | 23057457 | ID=MsaT007795.1.exon2;Parent=MsaT007795.1 |
Chr2 | CDS | 23057457 | 23058322 | 23057457 | ID=cds.MsaT007795.1;Parent=MsaT007795.1 |
Chr2 | exon | 23059695 | 23059719 | 23059695 | ID=MsaT007795.1.exon1;Parent=MsaT007795.1 |
Chr2 | CDS | 23059695 | 23059719 | 23059695 | ID=cds.MsaT007795.1;Parent=MsaT007795.1 |
Gene Sequence |
Protein sequence |