AlfalfaGEDB | MsaG008037

M. sativa ssp. caerulea / MsaG008037

KEGG: K09338
GO: GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00046.32

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008037	XP_013463424.1	97.674	215	5	0	1	215	1	215	1.46e-149	424

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008037	sp\|Q05466\|HAT4_ARATH	49.032	155	79	0	55	209	102	256	4.94e-42	146

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008037	G7IIE0	97.674	215	5	0	1	215	1	215	6.98e-150	424

TFs/TRs:

Gene ID	Type	Classification
MsaG008037	TF	HB-other

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000164	MsaG008037	0.801596	1.401317e-48	1.964236e-46
MsaG000314	MsaG008037	0.837132	1.140445e-56	4.073100e-54
MsaG000336	MsaG008037	0.834727	4.616444e-56	1.533843e-53
MsaG000490	MsaG008037	0.808624	4.815525e-50	7.955068e-48
MsaG000425	MsaG008037	0.800639	2.194365e-48	3.010100e-46
MsaG000690	MsaG008037	0.802466	9.300098e-49	1.329737e-46
MsaG000686	MsaG008037	0.814954	2.048242e-51	3.954849e-49
MsaG000791	MsaG008037	0.821391	7.274354e-53	1.659888e-50
MsaG000940	MsaG008037	0.811231	1.331133e-50	2.342535e-48
MsaG001192	MsaG008037	0.818141	3.990105e-52	8.358657e-50
MsaG001201	MsaG008037	0.836879	1.323182e-56	4.689427e-54
MsaG001306	MsaG008037	0.800431	2.418261e-48	3.301632e-46
MsaG001514	MsaG008037	0.810996	1.495700e-50	2.617006e-48
MsaG001855	MsaG008037	0.817234	6.375209e-52	1.304705e-49
MsaG002093	MsaG008037	0.807341	9.004337e-50	1.442345e-47
MsaG002201	MsaG008037	0.809625	2.946566e-50	4.986539e-48
MsaG002373	MsaG008037	0.817857	4.622277e-52	9.612116e-50
MsaG002660	MsaG008037	0.808297	5.650917e-50	9.261980e-48
MsaG002906	MsaG008037	0.809740	2.784195e-50	4.724871e-48
MsaG003105	MsaG008037	0.816375	9.912798e-52	1.984303e-49
MsaG003141	MsaG008037	0.810989	1.501249e-50	2.626261e-48
MsaG003351	MsaG008037	0.800363	2.496029e-48	3.402579e-46
MsaG003589	MsaG008037	0.803113	6.848353e-49	9.938586e-47
MsaG003721	MsaG008037	0.802801	7.937918e-49	1.143686e-46
MsaG003854	MsaG008037	0.800655	2.177938e-48	2.988664e-46
MsaG003870	MsaG008037	0.812884	5.827727e-51	1.068306e-48
MsaG004067	MsaG008037	0.802888	7.616749e-49	1.099628e-46
MsaG004230	MsaG008037	0.803483	5.744186e-49	8.407654e-47
MsaG004539	MsaG008037	0.804881	2.949381e-49	4.459159e-47
MsaG004984	MsaG008037	0.806527	1.335765e-49	2.098994e-47
MsaG005045	MsaG008037	0.806441	1.392551e-49	2.183834e-47
MsaG005035	MsaG008037	0.800676	2.156920e-48	2.961197e-46
MsaG005310	MsaG008037	0.812802	6.072769e-51	1.110947e-48
MsaG005327	MsaG008037	0.805532	2.157964e-49	3.312217e-47
MsaG005368	MsaG008037	0.801512	1.457692e-48	2.039362e-46
MsaG005460	MsaG008037	0.801238	1.657415e-48	2.304388e-46
MsaG005480	MsaG008037	0.800496	2.345365e-48	3.206786e-46
MsaG005560	MsaG008037	0.814740	2.283832e-51	4.385923e-49
MsaG005564	MsaG008037	0.818774	2.871584e-52	6.115099e-50
MsaG005866	MsaG008037	0.831623	2.713147e-55	8.228248e-53
MsaG006145	MsaG008037	0.801434	1.511587e-48	2.111071e-46
MsaG006477	MsaG008037	0.820751	1.019907e-52	2.288074e-50
MsaG006560	MsaG008037	0.812310	7.771907e-51	1.404462e-48
MsaG006986	MsaG008037	0.808512	5.087175e-50	8.381293e-48
MsaG007112	MsaG008037	0.804474	3.582845e-49	5.365910e-47
MsaG007116	MsaG008037	0.814066	3.212888e-51	6.066560e-49
MsaG007206	MsaG008037	0.812012	9.016746e-51	1.617512e-48
MsaG007434	MsaG008037	0.809705	2.831746e-50	4.801545e-48
MsaG007700	MsaG008037	0.811780	1.012544e-50	1.806058e-48
MsaG007719	MsaG008037	0.824337	1.509826e-53	3.729970e-51
MsaG008037	MsaG008081	0.823827	1.985827e-53	4.838253e-51
MsaG008037	MsaG008164	0.806357	1.449964e-49	2.269316e-47
MsaG008037	MsaG008193	0.814967	2.035115e-51	3.930797e-49
MsaG008037	MsaG008291	0.820082	1.449513e-52	3.195026e-50
MsaG008037	MsaG008337	0.806972	1.076937e-49	1.710039e-47
MsaG008037	MsaG008889	0.802227	1.040886e-48	1.480141e-46
MsaG008037	MsaG009230	0.810820	1.632445e-50	2.844046e-48
MsaG008037	MsaG009472	0.804201	4.080860e-49	6.073399e-47
MsaG008037	MsaG009765	0.826667	4.262067e-54	1.122832e-51
MsaG008037	MsaG009852	0.812876	5.851394e-51	1.072440e-48
MsaG008037	MsaG010206	0.830775	4.373859e-55	1.294197e-52
MsaG008037	MsaG010499	0.808368	5.457012e-50	8.959410e-48
MsaG008037	MsaG010898	0.805735	1.956860e-49	3.017960e-47
MsaG008037	MsaG011073	0.800533	2.305564e-48	3.155059e-46
MsaG008037	MsaG011174	0.818345	3.588060e-52	7.556068e-50
MsaG008037	MsaG011079	0.804571	3.420580e-49	5.134446e-47
MsaG008037	MsaG011257	0.811610	1.102261e-50	1.957881e-48
MsaG008037	MsaG011459	0.816856	7.742999e-52	1.569203e-49
MsaG008037	MsaG011559	0.807979	6.600608e-50	1.073621e-47
MsaG008037	MsaG011740	0.806872	1.130356e-49	1.790654e-47
MsaG008037	MsaG011946	0.815791	1.336980e-51	2.636771e-49
MsaG008037	MsaG012378	0.821121	8.392616e-53	1.901409e-50
MsaG008037	MsaG012492	0.825995	6.150768e-54	1.590435e-51
MsaG008037	MsaG013310	0.812833	5.980471e-51	1.094885e-48
MsaG008037	MsaG013413	0.806292	1.496618e-49	2.338756e-47
MsaG008037	MsaG013734	0.803301	6.263914e-49	9.129685e-47
MsaG008037	MsaG013901	0.826345	5.081476e-54	1.326773e-51
MsaG008037	MsaG014022	0.811158	1.380273e-50	2.424704e-48
MsaG008037	MsaG014058	0.810309	2.102680e-50	3.617917e-48
MsaG008037	MsaG014037	0.817716	4.970381e-52	1.029839e-49
MsaG008037	MsaG014042	0.812018	8.991596e-51	1.613223e-48
MsaG008037	MsaG014048	0.823306	2.626536e-53	6.309399e-51
MsaG008037	MsaG014294	0.830097	6.395125e-55	1.855962e-52
MsaG008037	MsaG014314	0.814057	3.227988e-51	6.093608e-49
MsaG008037	MsaG014394	0.801086	1.779747e-48	2.466007e-46
MsaG008037	MsaG014494	0.845481	7.419644e-59	3.454043e-56
MsaG008037	MsaG014508	0.821304	7.615760e-53	1.733818e-50
MsaG008037	MsaG015221	0.807410	8.706394e-50	1.396922e-47
MsaG008037	MsaG015976	0.804452	3.620483e-49	5.419512e-47
MsaG008037	MsaG016026	0.801493	1.470751e-48	2.056723e-46
MsaG008037	MsaG016121	0.821604	6.497938e-53	1.491127e-50
MsaG008037	MsaG016429	0.812438	7.288967e-51	1.321432e-48
MsaG008037	MsaG017153	0.806122	1.624227e-49	2.527883e-47
MsaG008037	MsaG017270	0.807421	8.661446e-50	1.390073e-47
MsaG008037	MsaG017293	0.814603	2.448257e-51	4.685328e-49
MsaG008037	MsaG017499	0.800372	2.485781e-48	3.389238e-46
MsaG008037	MsaG018250	0.804523	3.499442e-49	5.246996e-47
MsaG008037	MsaG018355	0.820050	1.474594e-52	3.247499e-50
MsaG008037	MsaG018502	0.828769	1.339377e-54	3.742441e-52
MsaG008037	MsaG018970	0.809633	2.933796e-50	4.965942e-48
MsaG008037	MsaG019130	0.814118	3.129875e-51	5.917535e-49
MsaG008037	MsaG019352	0.837945	7.073503e-57	2.589936e-54
MsaG008037	MsaG019624	0.831686	2.618060e-55	7.954794e-53
MsaG008037	MsaG019738	0.801296	1.612988e-48	2.245619e-46
MsaG008037	MsaG020220	0.810424	1.985584e-50	3.426190e-48
MsaG008037	MsaG020449	0.810314	2.096544e-50	3.607892e-48
MsaG008037	MsaG020896	0.808239	5.812293e-50	9.513409e-48
MsaG008037	MsaG020934	0.802878	7.653666e-49	1.104688e-46
MsaG008037	MsaG021085	0.823593	2.252004e-53	5.452135e-51
MsaG008037	MsaG021323	0.805665	2.023947e-49	3.116259e-47
MsaG008037	MsaG021293	0.801330	1.587559e-48	2.211955e-46
MsaG008037	MsaG021314	0.808033	6.426851e-50	1.046744e-47
MsaG008037	MsaG021589	0.801487	1.474899e-48	2.062228e-46
MsaG008037	MsaG021783	0.800231	2.654902e-48	3.608256e-46
MsaG008037	MsaG021836	0.801190	1.695037e-48	2.354180e-46
MsaG008037	MsaG022426	0.803148	6.736268e-49	9.783468e-47
MsaG008037	MsaG022523	0.816776	8.071270e-52	1.632366e-49
MsaG008037	MsaG022548	0.804855	2.985779e-49	4.511505e-47
MsaG008037	MsaG022609	0.819937	1.563996e-52	3.434071e-50
MsaG008037	MsaG022981	0.818735	2.930716e-52	6.234488e-50
MsaG008037	MsaG023134	0.800052	2.885626e-48	3.906155e-46
MsaG008037	MsaG023246	0.802102	1.104369e-48	1.565879e-46
MsaG008037	MsaG023575	0.811056	1.452032e-50	2.544392e-48
MsaG008037	MsaG023667	0.813426	4.437724e-51	8.246028e-49
MsaG008037	MsaG024535	0.803898	4.715594e-49	6.968647e-47
MsaG008037	MsaG024548	0.826298	5.211828e-54	1.359022e-51
MsaG008037	MsaG025475	0.824553	1.343306e-53	3.338143e-51
MsaG008037	MsaG025714	0.804327	3.843710e-49	5.737156e-47
MsaG008037	MsaG025776	0.825075	1.013093e-53	2.553779e-51
MsaG008037	MsaG026220	0.813133	5.142047e-51	9.484837e-49
MsaG008037	MsaG026479	0.816306	1.027422e-51	2.052998e-49
MsaG008037	MsaG026614	0.805543	2.146983e-49	3.296161e-47
MsaG008037	MsaG026637	0.800368	2.490675e-48	3.395623e-46
MsaG008037	MsaG026937	0.803462	5.801838e-49	8.487912e-47
MsaG008037	MsaG027250	0.808736	4.559333e-50	7.552565e-48
MsaG008037	MsaG027462	0.815607	1.468619e-51	2.883003e-49
MsaG008037	MsaG027610	0.808093	6.242420e-50	1.018155e-47
MsaG008037	MsaG027690	0.806080	1.657499e-49	2.577097e-47
MsaG008037	MsaG027991	0.806083	1.655332e-49	2.573890e-47
MsaG008037	MsaG028204	0.817128	6.732415e-52	1.374042e-49
MsaG008037	MsaG028308	0.813108	5.208371e-51	9.600945e-49
MsaG008037	MsaG028370	0.809617	2.957132e-50	5.003546e-48
MsaG008037	MsaG028423	0.819814	1.668030e-52	3.650463e-50
MsaG008037	MsaG028601	0.804187	4.109391e-49	6.113795e-47
MsaG008037	MsaG028604	0.826777	4.012958e-54	1.060411e-51
MsaG008037	MsaG028708	0.826948	3.654927e-54	9.704452e-52
MsaG008037	MsaG028711	0.814699	2.331808e-51	4.473436e-49
MsaG008037	MsaG028742	0.807499	8.337453e-50	1.340591e-47
MsaG008037	MsaG028821	0.801848	1.244465e-48	1.754428e-46
MsaG008037	MsaG029084	0.816114	1.133296e-51	2.253505e-49
MsaG008037	MsaG029311	0.802009	1.153765e-48	1.632464e-46
MsaG008037	MsaG029366	0.806733	1.209237e-49	1.909406e-47
MsaG008037	MsaG029341	0.800654	2.178912e-48	2.989928e-46
MsaG008037	MsaG029342	0.804739	3.156529e-49	4.756538e-47
MsaG008037	MsaG029680	0.825802	6.830303e-54	1.756667e-51
MsaG008037	MsaG029734	0.805824	1.875380e-49	2.898304e-47
MsaG008037	MsaG029922	0.823600	2.243141e-53	5.431844e-51
MsaG008037	MsaG030194	0.829763	7.704548e-55	2.214674e-52
MsaG008037	MsaG030222	0.805549	2.140641e-49	3.286893e-47
MsaG008037	MsaG030592	0.802039	1.137321e-48	1.610338e-46
MsaG008037	MsaG030774	0.806055	1.677296e-49	2.606385e-47
MsaG008037	MsaG031139	0.813064	5.323252e-51	9.802485e-49
MsaG008037	MsaG031645	0.818694	2.993319e-52	6.360920e-50
MsaG008037	MsaG032298	0.841369	9.191652e-58	3.746273e-55
MsaG008037	MsaG032206	0.837439	9.527254e-57	3.434819e-54
MsaG008037	MsaG032340	0.807102	1.011084e-49	1.610417e-47
MsaG008037	MsaG032426	0.802387	9.653858e-49	1.377854e-46
MsaG008037	MsaG033021	0.804965	2.832721e-49	4.291108e-47
MsaG008037	MsaG033451	0.816969	7.308166e-52	1.485422e-49
MsaG008037	MsaG033776	0.800590	2.244802e-48	3.075864e-46
MsaG008037	MsaG034066	0.811898	9.548661e-51	1.708123e-48
MsaG008037	MsaG034173	0.801413	1.526580e-48	2.131005e-46
MsaG008037	MsaG034232	0.802463	9.312493e-49	1.331431e-46
MsaG008037	MsaG034248	0.818564	3.202977e-52	6.783342e-50
MsaG008037	MsaG034252	0.818073	4.132446e-52	8.641602e-50
MsaG008037	MsaG034416	0.813802	3.671818e-51	6.887527e-49
MsaG008037	MsaG034798	0.832388	1.759332e-55	5.455322e-53
MsaG008037	MsaG035118	0.801388	1.544667e-48	2.155016e-46
MsaG008037	MsaG035219	0.800120	2.795754e-48	3.790168e-46
MsaG008037	MsaG035253	0.807772	7.298765e-50	1.181303e-47
MsaG008037	MsaG035494	0.809406	3.281998e-50	5.524816e-48
MsaG008037	MsaG035683	0.812549	6.894869e-51	1.253455e-48
MsaG008037	MsaG035699	0.836565	1.589309e-56	5.579554e-54
MsaG008037	MsaG035700	0.800699	2.133794e-48	2.930978e-46
MsaG008037	MsaG036140	0.800233	2.651758e-48	3.604192e-46
MsaG008037	MsaG036577	0.803466	5.792099e-49	8.474308e-47
MsaG008037	MsaG036690	0.815942	1.237922e-51	2.450828e-49
MsaG008037	MsaG039397	0.810705	1.727880e-50	3.001847e-48
MsaG008037	MsaG039918	0.834407	5.548052e-56	1.825860e-53
MsaG008037	MsaG040143	0.842919	3.589534e-58	1.537337e-55
MsaG008037	MsaG040402	0.810781	1.664392e-50	2.896956e-48
MsaG008037	MsaG040683	0.811153	1.383601e-50	2.430237e-48
MsaG008037	MsaG040950	0.806247	1.529463e-49	2.387516e-47
MsaG008037	MsaG041434	0.814376	2.746338e-51	5.226237e-49
MsaG008037	MsaG041878	0.817782	4.803287e-52	9.969304e-50
MsaG008037	MsaG041940	0.828238	1.796864e-54	4.946667e-52
MsaG008037	MsaG042064	0.804081	4.321264e-49	6.413452e-47
MsaG008037	MsaG042101	0.802315	9.988336e-49	1.423240e-46
MsaG008037	MsaG042911	0.807139	9.930015e-50	1.583005e-47
MsaG008037	MsaG043285	0.816390	9.837750e-52	1.970013e-49
MsaG008037	MsaG043390	0.807103	1.010371e-49	1.609342e-47
MsaG008037	MsaG043756	0.800043	2.897057e-48	3.920799e-46
MsaG008037	MsaG044052	0.810312	2.098567e-50	3.611193e-48
MsaG008037	MsaG044119	0.818788	2.850055e-52	6.071529e-50
MsaG008037	MsaG044313	0.804020	4.448521e-49	6.592952e-47
MsaG008037	MsaG044621	0.825543	7.864498e-54	2.008121e-51
MsaG008037	MsaG044633	0.812067	8.775029e-51	1.576195e-48
MsaG008037	MsaG045212	0.809688	2.856182e-50	4.840926e-48
MsaG008037	MsaG045601	0.814649	2.390817e-51	4.580925e-49
MsaG008037	MsaG045612	0.827921	2.140953e-54	5.841835e-52
MsaG008037	MsaG045692	0.805413	2.285309e-49	3.497965e-47
MsaG008037	MsaG045670	0.800578	2.257133e-48	3.091972e-46
MsaG008037	MsaG045758	0.804218	4.047988e-49	6.026923e-47
MsaG008037	MsaG046264	0.814287	2.873522e-51	5.456017e-49
MsaG008037	MsaG046299	0.801011	1.843384e-48	2.549892e-46
MsaG008037	MsaG046562	0.818437	3.422092e-52	7.223630e-50
MsaG008037	MsaG046671	0.806827	1.155398e-49	1.828348e-47
MsaG008037	MsaG046662	0.815346	1.677557e-51	3.271414e-49
MsaG008037	MsaG046738	0.800570	2.265820e-48	3.103298e-46
MsaG008037	MsaG046786	0.823520	2.341685e-53	5.657933e-51
MsaG008037	MsaG046920	0.822277	4.547474e-53	1.062447e-50
MsaG008037	MsaG047034	0.830497	5.112470e-55	1.500642e-52
MsaG008037	MsaG047200	0.804679	3.247830e-49	4.887379e-47
MsaG008037	MsaG002445	0.823139	2.871758e-53	6.867348e-51
MsaG008037	MsaG006154	0.803561	5.535218e-49	8.116468e-47
MsaG008037	MsaG008828	0.807218	9.554645e-50	1.526030e-47
MsaG008037	MsaG008960	0.821610	6.480514e-53	1.487329e-50
MsaG008037	MsaG008820	0.819006	2.545038e-52	5.452806e-50
MsaG008037	MsaG008205	0.802323	9.951111e-49	1.418207e-46
MsaG008037	MsaG014188	0.811287	1.294189e-50	2.280713e-48
MsaG008037	MsaG011491	0.811385	1.232605e-50	2.177399e-48
MsaG008037	MsaG012253	0.803785	4.976366e-49	7.334833e-47
MsaG008037	MsaG012734	0.819765	1.711839e-52	3.741321e-50
MsaG008037	MsaG016720	0.804052	4.381748e-49	6.498924e-47
MsaG008037	MsaG011818	0.811800	1.002365e-50	1.788816e-48
MsaG008037	MsaG012606	0.817157	6.632026e-52	1.354576e-49
MsaG008037	MsaG013856	0.802511	9.102626e-49	1.302865e-46
MsaG008037	MsaG019389	0.814803	2.211846e-51	4.254498e-49
MsaG008037	MsaG018051	0.807200	9.641017e-50	1.539155e-47
MsaG008037	MsaG020214	0.800681	2.151812e-48	2.954543e-46
MsaG008037	MsaG028385	0.800450	2.396421e-48	3.273254e-46
MsaG008037	MsaG026444	0.801283	1.623284e-48	2.259221e-46
MsaG008037	MsaG027031	0.821917	5.504872e-53	1.273787e-50
MsaG008037	MsaG029639	0.804159	4.164296e-49	6.191472e-47
MsaG008037	MsaG032967	0.809424	3.252068e-50	5.477058e-48
MsaG008037	MsaG030582	0.806946	1.090474e-49	1.730490e-47
MsaG008037	MsaG033085	0.807963	6.650338e-50	1.081298e-47
MsaG008037	MsaG032081	0.813505	4.265280e-51	7.941115e-49
MsaG008037	MsaG031621	0.818023	4.241366e-52	8.858066e-50
MsaG008037	MsaG030727	0.822742	3.549507e-53	8.397717e-51
MsaG008037	MsaG037392	0.810138	2.288084e-50	3.920450e-48
MsaG008037	MsaG036648	0.829584	8.515776e-55	2.435399e-52
MsaG008037	MsaG037627	0.857963	2.226041e-62	1.603016e-59
MsaG008037	MsaG037217	0.811628	1.092250e-50	1.940954e-48
MsaG008037	MsaG036804	0.807692	7.591496e-50	1.226285e-47
MsaG008037	MsaG043479	0.803670	5.256736e-49	7.727493e-47
MsaG008037	MsaG043655	0.800912	1.931188e-48	2.665308e-46
MsaG008037	MsaG043242	0.811199	1.352390e-50	2.378076e-48
MsaG008037	MsaG046894	0.815884	1.274606e-51	2.519740e-49
MsaG008037	MsaG047168	0.805746	1.946843e-49	3.003213e-47
MsaG008037	MsaG047176	0.810476	1.935587e-50	3.344078e-48
MsaG008037	MsaG047199	0.809773	2.739345e-50	4.652460e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008037	MtrunA17_Chr2g0299031	97.674	215	5	0	1	215	1	215	1.34e-153	424
MsaG008037	MtrunA17_Chr4g0055851	45.143	175	96	0	38	212	76	250	1.01e-42	145
MsaG008037	MtrunA17_Chr7g0258831	56.818	132	54	2	66	195	142	272	4.74e-41	141
MsaG008037	MtrunA17_Chr5g0399491	44.828	174	85	2	34	199	83	253	5.22e-41	141
MsaG008037	MtrunA17_Chr5g0400781	58.594	128	48	2	70	197	115	237	5.90e-41	140
MsaG008037	MtrunA17_Chr8g0335131	61.062	113	44	0	82	194	146	258	5.93e-41	141
MsaG008037	MtrunA17_Chr1g0175651	56.296	135	49	3	66	195	137	266	2.19e-40	139
MsaG008037	MtrunA17_Chr4g0054421	62.609	115	40	2	82	195	127	239	5.05e-40	138
MsaG008037	MtrunA17_Chr2g0308611	60.870	115	42	2	82	195	200	312	6.87e-38	134
MsaG008037	MtrunA17_Chr1g0151971	49.677	155	74	3	49	199	94	248	3.22e-36	128
MsaG008037	MtrunA17_Chr4g0044091	50.847	118	53	1	82	194	65	182	3.68e-34	120
MsaG008037	MtrunA17_Chr4g0071411	42.788	208	99	5	11	201	7	211	5.94e-34	120
MsaG008037	MtrunA17_Chr3g0135331	56.693	127	52	2	69	195	133	256	1.36e-32	119
MsaG008037	MtrunA17_Chr1g0179581	37.383	107	65	1	58	164	6	110	9.06e-13	62.4
MsaG008037	MtrunA17_Chr5g0416391	37.273	110	66	1	60	169	58	164	9.91e-13	65.5
MsaG008037	MtrunA17_Chr7g0265521	32.667	150	91	4	27	169	4	150	1.92e-12	64.3
MsaG008037	MtrunA17_Chr6g0450991	41.935	93	47	1	82	167	67	159	2.91e-12	64.3
MsaG008037	MtrunA17_Chr7g0217111	42.268	97	52	1	79	171	77	173	3.31e-12	63.9
MsaG008037	MtrunA17_Chr5g0415941	40.000	95	50	1	81	168	86	180	4.11e-12	64.3
MsaG008037	MtrunA17_Chr3g0119291	34.586	133	56	2	68	169	21	153	4.43e-12	63.5
MsaG008037	MtrunA17_Chr8g0381741	37.313	134	75	4	56	181	29	161	4.49e-12	63.9
MsaG008037	MtrunA17_Chr6g0453021	40.385	104	58	1	70	169	80	183	2.27e-11	61.6
MsaG008037	MtrunA17_Chr8g0362751	41.053	95	49	1	81	168	88	182	4.00e-11	61.2
MsaG008037	MtrunA17_Chr4g0060031	40.909	88	52	0	82	169	95	182	4.19e-11	61.2
MsaG008037	MtrunA17_Chr8g0362151	36.697	109	65	2	60	168	59	163	7.69e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008037	AT4G16780.1	49.032	155	79	0	55	209	102	256	5.02e-43	146
MsaG008037	AT4G17460.1	56.154	130	55	1	72	199	123	252	1.07e-41	143
MsaG008037	AT5G47370.1	57.627	118	50	0	82	199	130	247	4.06e-40	139
MsaG008037	AT3G60390.1	55.738	122	54	0	73	194	153	274	9.78e-40	139
MsaG008037	AT5G06710.1	56.452	124	53	1	72	195	180	302	1.52e-39	139
MsaG008037	AT4G37790.1	57.143	126	51	2	72	195	114	238	1.15e-38	135
MsaG008037	AT2G44910.1	57.895	114	48	0	82	195	163	276	1.37e-38	135
MsaG008037	AT2G22800.1	55.556	126	53	2	72	195	101	225	2.40e-37	131
MsaG008037	AT2G01430.1	54.386	114	49	1	82	195	139	249	5.26e-35	125
MsaG008037	AT1G70920.1	48.819	127	57	2	69	195	56	174	4.35e-29	108
MsaG008037	AT1G70920.2	48.819	127	57	2	69	195	26	144	4.41e-29	107
MsaG008037	AT5G06710.4	61.290	62	24	0	72	133	180	241	2.38e-18	81.3
MsaG008037	AT5G03790.1	43.299	97	55	0	74	170	69	165	3.15e-15	72.4
MsaG008037	AT2G01430.2	52.381	63	30	0	82	144	139	201	3.68e-14	68.9
MsaG008037	AT3G01220.1	32.738	168	101	3	52	212	57	219	5.14e-13	67.0
MsaG008037	AT5G03790.2	41.758	91	53	0	74	164	69	159	2.55e-12	63.5
MsaG008037	AT4G36740.2	37.755	98	61	0	71	168	45	142	3.24e-12	63.9
MsaG008037	AT4G36740.1	37.755	98	61	0	71	168	44	141	3.37e-12	63.5
MsaG008037	AT3G01470.1	47.222	72	38	0	82	153	68	139	5.79e-12	63.9
MsaG008037	AT2G18550.1	34.058	138	84	2	75	211	54	185	6.16e-12	63.2
MsaG008037	AT1G26960.1	40.909	88	52	0	82	169	71	158	1.83e-11	62.0
MsaG008037	AT1G69780.1	35.246	122	68	1	70	180	62	183	5.11e-11	61.2
MsaG008037	AT2G46680.1	39.394	99	56	1	85	179	35	133	9.84e-11	60.1

Find 37 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATACCTTGCTCTTCTGTTC+TGG	0.227517	2:-26978521	None:intergenic
GTTCATCATGCAAGAAAATA+TGG	0.268795	2:+26979339	MsaT008037.1:CDS
GATGATTGAGTTGTGTTTGA+TGG	0.272598	2:-26979293	None:intergenic
AATCATCTAAAGCTGCAAAT+TGG	0.315157	2:+26979309	MsaT008037.1:CDS
CTTAATCTTAAACTTGGATT+AGG	0.319965	2:+26977976	MsaT008037.1:CDS
CCATTGATTTGAACCATGAT+AGG	0.325695	2:+26978055	MsaT008037.1:CDS
GGTTGATTCAAAAGAAGAAT+TGG	0.345182	2:+26978032	MsaT008037.1:CDS
TAGACTTTAATCTAACTCTA+TGG	0.352396	2:-26979405	None:intergenic
AACTAAGTGAGGAGAATCTT+AGG	0.353207	2:+26979228	MsaT008037.1:CDS
AGCAAAGACAGGTTGAAGTT+TGG	0.373329	2:+26978496	MsaT008037.1:CDS
TGAGCACCCGTTGTTGTCAT+TGG	0.382575	2:-26978154	None:intergenic
AATAACAACATCCTCCTCAT+TGG	0.419038	2:-26979366	None:intergenic
TCAATTCATTTGCCCTATCA+TGG	0.421387	2:-26978068	None:intergenic
AATTGTGCTGTGACGCTTGA+AGG	0.428719	2:-26978223	None:intergenic
TTTCTTGCATGATGAACAAA+TGG	0.440678	2:-26979333	None:intergenic
ATAACAACATCCTCCTCATT+GGG	0.441004	2:-26979365	None:intergenic
ACACCACCAATGACAACAAC+GGG	0.443518	2:+26978148	MsaT008037.1:CDS
TTGGATCTTAATCTTAAACT+TGG	0.447542	2:+26977970	MsaT008037.1:CDS
ATTGAATTTAAAGCAAAGAC+AGG	0.478696	2:+26978485	MsaT008037.1:CDS
CCTATCATGGTTCAAATCAA+TGG	0.487751	2:-26978055	None:intergenic
AGGTGAACTGTATATATTTG+AGG	0.516757	2:+26979192	MsaT008037.1:CDS
GGAGAATCTTAGGTTGAAGA+AGG	0.518622	2:+26979238	MsaT008037.1:CDS
GCACCCGTTGTTGTCATTGG+TGG	0.522365	2:-26978151	None:intergenic
GAACTGCGTGCATTAAAAGT+TGG	0.525263	2:+26979269	MsaT008037.1:CDS
CATTGATTTGAACCATGATA+GGG	0.530963	2:+26978056	MsaT008037.1:CDS
AATCTAACTCTATGGTGCTG+TGG	0.578396	2:-26979397	None:intergenic
AAACAATGTGAACAAACCAT+TGG	0.584661	2:+26978011	MsaT008037.1:CDS
ACGGGTGCTCAAAGAAATTG+AGG	0.587563	2:+26978166	MsaT008037.1:CDS
TCATCACATGGCATGCACGT+TGG	0.602607	2:+26977951	MsaT008037.1:CDS
GAAAATATGGAAGCCCAATG+AGG	0.640653	2:+26979352	MsaT008037.1:CDS
GACACCACCAATGACAACAA+CGG	0.643008	2:+26978147	MsaT008037.1:CDS
GGTTCCAGAACAGAAGAGCA+AGG	0.646687	2:+26978517	MsaT008037.1:CDS
AATATGGAAGCCCAATGAGG+AGG	0.651470	2:+26979355	MsaT008037.1:CDS
ATGATCTTGATCATCATCCA+TGG	0.675243	2:-26977932	None:intergenic
ATGTCATGAGAAACTAAGTG+AGG	0.678157	2:+26979217	MsaT008037.1:CDS
TGATGATCAAGATCATCACA+TGG	0.696569	2:+26977939	MsaT008037.1:CDS
GACTAAGCTGAAACAAACAG+AGG	0.748545	2:+26979172	MsaT008037.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	26977934	26979421	26977934	ID=MsaG008037
Chr2	mRNA	26977934	26979421	26977934	ID=MsaT008037.1;Parent=MsaG008037
Chr2	exon	26977934	26978251	26977934	ID=MsaT008037.1.exon1;Parent=MsaT008037.1
Chr2	CDS	26977934	26978251	26977934	ID=cds.MsaT008037.1;Parent=MsaT008037.1
Chr2	exon	26978459	26978538	26978459	ID=MsaT008037.1.exon2;Parent=MsaT008037.1
Chr2	CDS	26978459	26978538	26978459	ID=cds.MsaT008037.1;Parent=MsaT008037.1
Chr2	exon	26979172	26979421	26979172	ID=MsaT008037.1.exon3;Parent=MsaT008037.1
Chr2	CDS	26979172	26979421	26979172	ID=cds.MsaT008037.1;Parent=MsaT008037.1

Gene Sequence

>MsaT008037.1

ATGGATGATGATCAAGATCATCACATGGCATGCACGTTGGATCTTAATCTTAAACTTGGATTAGGAAGTTATGTGCAAAACAATGTGAACAAACCATTGGTTGATTCAAAAGAAGAATTGGCCATTGATTTGAACCATGATAGGGCAAATGAATTGAGTTTGAAGAGAGTGCATGAAGAACAAGCAAACACAGTTGAAGAAGAAATTGATATTGACACCACCAATGACAACAACGGGTGCTCAAAGAAATTGAGGCTTACAACTGAGCAATCAACCAAGCTTGAAAATGCCTTCAAGCGTCACAGCACAATTAACACCGCTCAAAAACGGGCACTTGCTGAGGAATTGAATTTAAAGCAAAGACAGGTTGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACTAAGCTGAAACAAACAGAGGTGAACTGTATATATTTGAGGAAATGTCATGAGAAACTAAGTGAGGAGAATCTTAGGTTGAAGAAGGAATTAGAAGAACTGCGTGCATTAAAAGTTGGACCATCAAACACAACTCAATCATCTAAAGCTGCAAATTGGACCATTTGTTCATCATGCAAGAAAATATGGAAGCCCAATGAGGAGGATGTTGTTATTAAGAGCAGCCACAGCACCATAGAGTTAGATTAA

Protein sequence

>MsaT008037.1

MDDDQDHHMACTLDLNLKLGLGSYVQNNVNKPLVDSKEELAIDLNHDRANELSLKRVHEEQANTVEEEIDIDTTNDNNGCSKKLRLTTEQSTKLENAFKRHSTINTAQKRALAEELNLKQRQVEVWFQNRRARTKLKQTEVNCIYLRKCHEKLSEENLRLKKELEELRALKVGPSNTTQSSKAANWTICSSCKKIWKPNEEDVVIKSSHSTIELD*