AlfalfaGEDB | MsaG008424

M. sativa ssp. caerulea / MsaG008424

KEGG: -
GO: GO:0001101 GO:0001678 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010581 GO:0010604 GO:0010628 GO:0010675 GO:0010962 GO:0019219 GO:0019222 GO:0019725 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032870 GO:0032881 GO:0032885 GO:0033500 GO:0033993 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048518 GO:0048522 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0055082 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000904 GO:2001141
PFAM: PF00170.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008424	KEH24552.1	68.293	123	19	3	48	169	104	207	4.38e-38	143

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008424	sp\|Q6VAG0\|TBA2_GOSHI	97.500	40	1	0	171	210	191	230	9.81e-18	85.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008424	A0A072U4C7	68.293	123	19	3	48	169	104	207	2.09e-38	143

TFs/TRs:

Gene ID	Type	Classification
MsaG008424	TF	bZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000009	MsaG008424	0.804509	3.522962e-49	5.280481e-47
MsaG000023	MsaG008424	0.807093	1.015361e-49	1.616910e-47
MsaG000138	MsaG008424	0.831521	2.873555e-55	8.688450e-53
MsaG000253	MsaG008424	0.829004	1.175626e-54	3.306717e-52
MsaG000260	MsaG008424	0.832670	1.498802e-55	4.685745e-53
MsaG000621	MsaG008424	0.844665	1.230021e-58	5.574566e-56
MsaG000705	MsaG008424	0.854387	2.456379e-61	1.552726e-58
MsaG000910	MsaG008424	0.815751	1.364257e-51	2.687850e-49
MsaG001045	MsaG008424	0.835177	3.560236e-56	1.198849e-53
MsaG001092	MsaG008424	0.841803	7.070608e-58	2.921884e-55
MsaG001121	MsaG008424	0.855126	1.503415e-61	9.756462e-59
MsaG001124	MsaG008424	0.835139	3.637645e-56	1.223578e-53
MsaG001128	MsaG008424	0.837853	7.466952e-57	2.726160e-54
MsaG001270	MsaG008424	0.839329	3.118371e-57	1.191900e-54
MsaG001277	MsaG008424	0.809424	3.252243e-50	5.477347e-48
MsaG001331	MsaG008424	0.806109	1.634069e-49	2.542445e-47
MsaG001700	MsaG008424	0.803873	4.772929e-49	7.049273e-47
MsaG001897	MsaG008424	0.830468	5.196725e-55	1.524138e-52
MsaG002636	MsaG008424	0.831815	2.434060e-55	7.423687e-53
MsaG002804	MsaG008424	0.822366	4.336498e-53	1.015630e-50
MsaG002785	MsaG008424	0.829032	1.157723e-54	3.259000e-52
MsaG003206	MsaG008424	0.810266	2.147810e-50	3.691646e-48
MsaG003806	MsaG008424	0.815178	1.827530e-51	3.548680e-49
MsaG004010	MsaG008424	0.875122	8.184179e-68	1.183356e-64
MsaG004091	MsaG008424	0.843422	2.639421e-58	1.148820e-55
MsaG004099	MsaG008424	0.809371	3.337693e-50	5.613825e-48
MsaG004348	MsaG008424	0.801480	1.479771e-48	2.068738e-46
MsaG004394	MsaG008424	0.858825	1.235089e-62	9.184404e-60
MsaG004445	MsaG008424	0.805069	2.694738e-49	4.091974e-47
MsaG004455	MsaG008424	0.822505	4.028014e-53	9.468695e-51
MsaG005038	MsaG008424	0.813045	5.374142e-51	9.891400e-49
MsaG005226	MsaG008424	0.831450	2.991427e-55	9.025826e-53
MsaG005275	MsaG008424	0.829936	6.996962e-55	2.021305e-52
MsaG005278	MsaG008424	0.822047	5.137817e-53	1.193012e-50
MsaG005345	MsaG008424	0.802823	7.855452e-49	1.132366e-46
MsaG005475	MsaG008424	0.828103	1.936127e-54	5.309983e-52
MsaG005487	MsaG008424	0.816826	7.866784e-52	1.593044e-49
MsaG005530	MsaG008424	0.839990	2.102906e-57	8.206892e-55
MsaG005814	MsaG008424	0.852909	6.503990e-61	3.900663e-58
MsaG005906	MsaG008424	0.809259	3.526280e-50	5.914950e-48
MsaG005940	MsaG008424	0.810099	2.331651e-50	3.991436e-48
MsaG006191	MsaG008424	0.802380	9.683163e-49	1.381825e-46
MsaG006284	MsaG008424	0.844977	1.014114e-58	4.644137e-56
MsaG006355	MsaG008424	0.845306	8.273963e-59	3.829417e-56
MsaG006426	MsaG008424	0.856608	5.571508e-62	3.816320e-59
MsaG006476	MsaG008424	0.808041	6.401724e-50	1.042839e-47
MsaG007042	MsaG008424	0.883981	6.071532e-71	1.323716e-67
MsaG007043	MsaG008424	0.819458	2.010218e-52	4.358381e-50
MsaG007078	MsaG008424	0.801496	1.468841e-48	2.054183e-46
MsaG007079	MsaG008424	0.801368	1.559355e-48	2.174488e-46
MsaG007146	MsaG008424	0.842048	6.095998e-58	2.539014e-55
MsaG007448	MsaG008424	0.822901	3.261595e-53	7.749571e-51
MsaG007452	MsaG008424	0.807054	1.035083e-49	1.646756e-47
MsaG008125	MsaG008424	0.875115	8.228262e-68	1.189371e-64
MsaG008409	MsaG008424	0.810299	2.112178e-50	3.633413e-48
MsaG008422	MsaG008424	0.809857	2.628414e-50	4.473095e-48
MsaG008424	MsaG008589	0.813328	4.663084e-51	8.643189e-49
MsaG008424	MsaG008848	0.862873	7.383813e-64	6.411792e-61
MsaG008424	MsaG008874	0.805229	2.496115e-49	3.804486e-47
MsaG008424	MsaG009423	0.817217	6.430952e-52	1.315535e-49
MsaG008424	MsaG009874	0.856354	6.608874e-62	4.485396e-59
MsaG008424	MsaG010113	0.844488	1.371434e-58	6.178994e-56
MsaG008424	MsaG010303	0.827353	2.926518e-54	7.858813e-52
MsaG008424	MsaG010307	0.846939	2.987113e-59	1.459739e-56
MsaG008424	MsaG010363	0.858531	1.510735e-62	1.111303e-59
MsaG008424	MsaG010635	0.810316	2.094732e-50	3.604922e-48
MsaG008424	MsaG010603	0.818664	3.040626e-52	6.456539e-50
MsaG008424	MsaG010604	0.867567	2.507162e-65	2.627640e-62
MsaG008424	MsaG010792	0.818671	3.029443e-52	6.433870e-50
MsaG008424	MsaG010807	0.807528	8.222024e-50	1.322924e-47
MsaG008424	MsaG011213	0.835685	2.651433e-56	9.065157e-54
MsaG008424	MsaG011525	0.822733	3.567124e-53	8.437347e-51
MsaG008424	MsaG011469	0.834289	5.940602e-56	1.948037e-53
MsaG008424	MsaG011559	0.808463	5.211144e-50	8.575420e-48
MsaG008424	MsaG011625	0.819284	2.200982e-52	4.750412e-50
MsaG008424	MsaG011690	0.809076	3.857983e-50	6.443170e-48
MsaG008424	MsaG012026	0.817227	6.399653e-52	1.309463e-49
MsaG008424	MsaG012078	0.810514	1.899577e-50	3.284879e-48
MsaG008424	MsaG012162	0.863096	6.302857e-64	5.522048e-61
MsaG008424	MsaG012334	0.838087	6.506866e-57	2.392858e-54
MsaG008424	MsaG012396	0.834946	4.068480e-56	1.360550e-53
MsaG008424	MsaG012675	0.817305	6.147422e-52	1.260358e-49
MsaG008424	MsaG012649	0.826999	3.553682e-54	9.448778e-52
MsaG008424	MsaG013222	0.811159	1.379755e-50	2.423824e-48
MsaG008424	MsaG013553	0.809369	3.341398e-50	5.619773e-48
MsaG008424	MsaG013798	0.804154	4.174415e-49	6.205818e-47
MsaG008424	MsaG013968	0.820190	1.369828e-52	3.028101e-50
MsaG008424	MsaG013971	0.847261	2.440847e-59	1.205755e-56
MsaG008424	MsaG014094	0.813104	5.219416e-51	9.620447e-49
MsaG008424	MsaG014135	0.800888	1.952744e-48	2.693661e-46
MsaG008424	MsaG014207	0.816215	1.076003e-51	2.145142e-49
MsaG008424	MsaG014471	0.824686	1.250855e-53	3.119501e-51
MsaG008424	MsaG014554	0.815652	1.435578e-51	2.821351e-49
MsaG008424	MsaG014940	0.807943	6.717501e-50	1.091701e-47
MsaG008424	MsaG015144	0.815716	1.389058e-51	2.734312e-49
MsaG008424	MsaG015237	0.801719	1.322451e-48	1.858876e-46
MsaG008424	MsaG015255	0.805221	2.505196e-49	3.817613e-47
MsaG008424	MsaG015319	0.854602	2.129958e-61	1.356627e-58
MsaG008424	MsaG015322	0.857251	3.608554e-62	2.530571e-59
MsaG008424	MsaG015512	0.806685	1.237161e-49	1.951343e-47
MsaG008424	MsaG015720	0.837674	8.297259e-57	3.012788e-54
MsaG008424	MsaG015854	0.803297	6.274895e-49	9.144942e-47
MsaG008424	MsaG016056	0.849444	6.118229e-60	3.253955e-57
MsaG008424	MsaG016118	0.829123	1.100517e-54	3.105904e-52
MsaG008424	MsaG016154	0.844147	1.691839e-58	7.538263e-56
MsaG008424	MsaG016159	0.831564	2.805533e-55	8.493402e-53
MsaG008424	MsaG016448	0.844558	1.313586e-58	5.932213e-56
MsaG008424	MsaG016531	0.817409	5.824198e-52	1.197299e-49
MsaG008424	MsaG017061	0.822762	3.511551e-53	8.312545e-51
MsaG008424	MsaG017041	0.801472	1.485354e-48	2.076173e-46
MsaG008424	MsaG017084	0.810043	2.396883e-50	4.097471e-48
MsaG008424	MsaG017167	0.814898	2.107460e-51	4.063443e-49
MsaG008424	MsaG017559	0.831257	3.335653e-55	1.000746e-52
MsaG008424	MsaG017561	0.826889	3.773725e-54	1.000349e-51
MsaG008424	MsaG017568	0.805792	1.904132e-49	2.940530e-47
MsaG008424	MsaG017887	0.823892	1.918119e-53	4.681400e-51
MsaG008424	MsaG017973	0.807335	9.030227e-50	1.446281e-47
MsaG008424	MsaG018680	0.852293	9.725752e-61	5.708541e-58
MsaG008424	MsaG019016	0.809432	3.240005e-50	5.457750e-48
MsaG008424	MsaG019243	0.828976	1.194426e-54	3.356896e-52
MsaG008424	MsaG019278	0.825711	7.177375e-54	1.841299e-51
MsaG008424	MsaG020499	0.806585	1.298519e-49	2.043300e-47
MsaG008424	MsaG020840	0.844322	1.519686e-58	6.809905e-56
MsaG008424	MsaG020863	0.806120	1.625813e-49	2.530222e-47
MsaG008424	MsaG021129	0.844949	1.032216e-58	4.722662e-56
MsaG008424	MsaG021131	0.823026	3.050824e-53	7.273384e-51
MsaG008424	MsaG021164	0.820415	1.217091e-52	2.706453e-50
MsaG008424	MsaG021165	0.826203	5.490494e-54	1.427904e-51
MsaG008424	MsaG021168	0.805051	2.718612e-49	4.126545e-47
MsaG008424	MsaG021264	0.805601	2.087489e-49	3.209256e-47
MsaG008424	MsaG021270	0.806072	1.663615e-49	2.586157e-47
MsaG008424	MsaG021344	0.822778	3.483166e-53	8.248784e-51
MsaG008424	MsaG021649	0.803327	6.187062e-49	9.023183e-47
MsaG008424	MsaG021888	0.846206	4.727526e-59	2.254391e-56
MsaG008424	MsaG022034	0.806574	1.305408e-49	2.053614e-47
MsaG008424	MsaG022226	0.832751	1.431664e-55	4.486593e-53
MsaG008424	MsaG022303	0.800716	2.116452e-48	2.908302e-46
MsaG008424	MsaG022579	0.835990	2.220985e-56	7.663399e-54
MsaG008424	MsaG022880	0.850820	2.528758e-60	1.409907e-57
MsaG008424	MsaG023078	0.854710	1.982455e-61	1.267536e-58
MsaG008424	MsaG023302	0.822794	3.452221e-53	8.179264e-51
MsaG008424	MsaG023970	0.813188	5.002738e-51	9.240679e-49
MsaG008424	MsaG023997	0.842600	4.358532e-58	1.847749e-55
MsaG008424	MsaG024046	0.801641	1.372028e-48	1.925164e-46
MsaG008424	MsaG024098	0.826701	4.182516e-54	1.102944e-51
MsaG008424	MsaG024126	0.819611	1.855199e-52	4.038273e-50
MsaG008424	MsaG024205	0.810482	1.929670e-50	3.334348e-48
MsaG008424	MsaG024451	0.811134	1.396588e-50	2.451874e-48
MsaG008424	MsaG024459	0.812622	6.647809e-51	1.210681e-48
MsaG008424	MsaG024461	0.809047	3.913447e-50	6.531324e-48
MsaG008424	MsaG024503	0.806503	1.351398e-49	2.122363e-47
MsaG008424	MsaG024728	0.801627	1.380904e-48	1.936996e-46
MsaG008424	MsaG024877	0.803912	4.684575e-49	6.925074e-47
MsaG008424	MsaG025331	0.809989	2.462330e-50	4.203833e-48
MsaG008424	MsaG025332	0.846654	3.572859e-59	1.729267e-56
MsaG008424	MsaG025838	0.854903	1.744339e-61	1.122941e-58
MsaG008424	MsaG025985	0.838082	6.525535e-57	2.399374e-54
MsaG008424	MsaG026152	0.818585	3.167604e-52	6.712349e-50
MsaG008424	MsaG026553	0.800230	2.656112e-48	3.609815e-46
MsaG008424	MsaG026675	0.802977	7.303629e-49	1.056595e-46
MsaG008424	MsaG026764	0.822585	3.858855e-53	9.090915e-51
MsaG008424	MsaG026826	0.812864	5.886804e-51	1.078586e-48
MsaG008424	MsaG026901	0.825448	8.277237e-54	2.107966e-51
MsaG008424	MsaG026989	0.807189	9.690923e-50	1.546745e-47
MsaG008424	MsaG027155	0.827721	2.389435e-54	6.483371e-52
MsaG008424	MsaG027543	0.806710	1.222402e-49	1.929148e-47
MsaG008424	MsaG027547	0.808536	5.027212e-50	8.287436e-48
MsaG008424	MsaG027759	0.818603	3.138169e-52	6.653110e-50
MsaG008424	MsaG028181	0.827388	2.869969e-54	7.714917e-52
MsaG008424	MsaG028232	0.827507	2.688547e-54	7.251053e-52
MsaG008424	MsaG028575	0.800507	2.333451e-48	3.191302e-46
MsaG008424	MsaG028585	0.827198	3.186497e-54	8.519855e-52
MsaG008424	MsaG028632	0.855342	1.301941e-61	8.515465e-59
MsaG008424	MsaG028969	0.805824	1.875350e-49	2.898260e-47
MsaG008424	MsaG028983	0.817346	6.017921e-52	1.235093e-49
MsaG008424	MsaG029029	0.842722	4.046762e-58	1.722256e-55
MsaG008424	MsaG029064	0.814425	2.679545e-51	5.105341e-49
MsaG008424	MsaG029106	0.823628	2.209402e-53	5.354287e-51
MsaG008424	MsaG029377	0.835994	2.216310e-56	7.648211e-54
MsaG008424	MsaG029621	0.814998	2.002932e-51	3.871704e-49
MsaG008424	MsaG029635	0.836824	1.366187e-56	4.833937e-54
MsaG008424	MsaG029810	0.803366	6.073883e-49	8.866100e-47
MsaG008424	MsaG030197	0.864097	3.093194e-64	2.819039e-61
MsaG008424	MsaG030200	0.816288	1.036673e-51	2.070561e-49
MsaG008424	MsaG030216	0.858181	1.919208e-62	1.393203e-59
MsaG008424	MsaG030455	0.869771	4.900205e-66	5.624030e-63
MsaG008424	MsaG030494	0.844154	1.685318e-58	7.510765e-56
MsaG008424	MsaG030698	0.836077	2.111597e-56	7.305124e-54
MsaG008424	MsaG031104	0.828247	1.788407e-54	4.924517e-52
MsaG008424	MsaG031527	0.808570	4.944204e-50	8.157183e-48
MsaG008424	MsaG031706	0.804471	3.587641e-49	5.372741e-47
MsaG008424	MsaG032038	0.811361	1.247804e-50	2.202908e-48
MsaG008424	MsaG032274	0.818056	4.168723e-52	8.713676e-50
MsaG008424	MsaG032554	0.804604	3.366439e-49	5.056976e-47
MsaG008424	MsaG033421	0.837989	6.893999e-57	2.527553e-54
MsaG008424	MsaG033570	0.840715	1.362228e-57	5.438452e-55
MsaG008424	MsaG033589	0.803881	4.754030e-49	7.022698e-47
MsaG008424	MsaG033588	0.847944	1.586745e-59	8.020776e-57
MsaG008424	MsaG033967	0.820025	1.493600e-52	3.287242e-50
MsaG008424	MsaG034370	0.811107	1.415273e-50	2.483097e-48
MsaG008424	MsaG034446	0.827056	3.444007e-54	9.171811e-52
MsaG008424	MsaG034620	0.817107	6.804513e-52	1.388008e-49
MsaG008424	MsaG034621	0.819937	1.564481e-52	3.435089e-50
MsaG008424	MsaG034689	0.822354	4.365730e-53	1.022127e-50
MsaG008424	MsaG035166	0.842210	5.524458e-58	2.312669e-55
MsaG008424	MsaG035144	0.806515	1.343210e-49	2.110130e-47
MsaG008424	MsaG035215	0.803637	5.340203e-49	7.843988e-47
MsaG008424	MsaG035271	0.819847	1.639838e-52	3.591932e-50
MsaG008424	MsaG036385	0.870958	2.008134e-66	2.423546e-63
MsaG008424	MsaG036482	0.847714	1.835072e-59	9.204129e-57
MsaG008424	MsaG036594	0.812237	8.060270e-51	1.453903e-48
MsaG008424	MsaG037309	0.810689	1.741965e-50	3.025121e-48
MsaG008424	MsaG037421	0.831789	2.470454e-55	7.528910e-53
MsaG008424	MsaG037919	0.806237	1.536750e-49	2.398333e-47
MsaG008424	MsaG037969	0.819841	1.644655e-52	3.601877e-50
MsaG008424	MsaG038325	0.822258	4.592502e-53	1.072418e-50
MsaG008424	MsaG038327	0.816715	8.327384e-52	1.681511e-49
MsaG008424	MsaG038520	0.838534	4.998234e-57	1.863826e-54
MsaG008424	MsaG038522	0.857665	2.726195e-62	1.941355e-59
MsaG008424	MsaG038737	0.820695	1.050259e-52	2.352643e-50
MsaG008424	MsaG038738	0.827543	2.636419e-54	7.117814e-52
MsaG008424	MsaG039633	0.801375	1.554034e-48	2.167437e-46
MsaG008424	MsaG039975	0.818294	3.685743e-52	7.751342e-50
MsaG008424	MsaG040311	0.826581	4.467110e-54	1.174022e-51
MsaG008424	MsaG040487	0.800936	1.909829e-48	2.637299e-46
MsaG008424	MsaG040450	0.807163	9.813280e-50	1.565319e-47
MsaG008424	MsaG040453	0.812644	6.574734e-51	1.198021e-48
MsaG008424	MsaG040511	0.818256	3.758512e-52	7.896706e-50
MsaG008424	MsaG040579	0.802787	7.990447e-49	1.150885e-46
MsaG008424	MsaG040685	0.810603	1.817418e-50	3.149607e-48
MsaG008424	MsaG041086	0.829160	1.078090e-54	3.045820e-52
MsaG008424	MsaG041293	0.855251	1.382949e-61	9.015802e-59
MsaG008424	MsaG041735	0.810025	2.418670e-50	4.132869e-48
MsaG008424	MsaG041854	0.855913	8.884430e-62	5.932260e-59
MsaG008424	MsaG041841	0.835888	2.357749e-56	8.110363e-54
MsaG008424	MsaG042016	0.800269	2.607276e-48	3.546626e-46
MsaG008424	MsaG042053	0.802545	8.958086e-49	1.283194e-46
MsaG008424	MsaG042057	0.835710	2.614535e-56	8.945520e-54
MsaG008424	MsaG042353	0.827470	2.744234e-54	7.393517e-52
MsaG008424	MsaG042354	0.836165	2.006356e-56	6.959759e-54
MsaG008424	MsaG042534	0.844672	1.224777e-58	5.552011e-56
MsaG008424	MsaG042720	0.833185	1.117455e-55	3.547017e-53
MsaG008424	MsaG042790	0.829390	9.488527e-55	2.698432e-52
MsaG008424	MsaG042796	0.821519	6.797421e-53	1.556328e-50
MsaG008424	MsaG042932	0.846283	4.504858e-59	2.153794e-56
MsaG008424	MsaG043183	0.828514	1.542394e-54	4.279387e-52
MsaG008424	MsaG043395	0.806010	1.714261e-49	2.660838e-47
MsaG008424	MsaG044050	0.826459	4.773370e-54	1.250372e-51
MsaG008424	MsaG044090	0.819206	2.292745e-52	4.938295e-50
MsaG008424	MsaG044316	0.816838	7.818149e-52	1.583659e-49
MsaG008424	MsaG044321	0.851695	1.435816e-60	8.251168e-58
MsaG008424	MsaG044575	0.841447	8.766539e-58	3.581880e-55
MsaG008424	MsaG044569	0.801961	1.179938e-48	1.667727e-46
MsaG008424	MsaG044630	0.805795	1.901647e-49	2.936873e-47
MsaG008424	MsaG044709	0.840372	1.672906e-57	6.607821e-55
MsaG008424	MsaG044869	0.862751	8.047211e-64	6.955042e-61
MsaG008424	MsaG045129	0.805418	2.279434e-49	3.489411e-47
MsaG008424	MsaG045400	0.812479	7.139214e-51	1.295620e-48
MsaG008424	MsaG045646	0.820027	1.492100e-52	3.284114e-50
MsaG008424	MsaG045736	0.808732	4.567967e-50	7.566146e-48
MsaG008424	MsaG045796	0.802374	9.714887e-49	1.386137e-46
MsaG008424	MsaG046137	0.800704	2.128811e-48	2.924472e-46
MsaG008424	MsaG046278	0.844726	1.184151e-58	5.377331e-56
MsaG008424	MsaG046368	0.849324	6.606355e-60	3.498916e-57
MsaG008424	MsaG046866	0.808398	5.379801e-50	8.838770e-48
MsaG008424	MsaG046967	0.832259	1.892630e-55	5.846799e-53
MsaG008424	MsaG002980	0.843579	2.398485e-58	1.049188e-55
MsaG008424	MsaG002355	0.839926	2.184515e-57	8.508358e-55
MsaG008424	MsaG001992	0.840785	1.306420e-57	5.227061e-55
MsaG008424	MsaG000822	0.849321	6.619059e-60	3.505278e-57
MsaG008424	MsaG009146	0.862016	1.350947e-63	1.134467e-60
MsaG008424	MsaG006540	0.840293	1.754412e-57	6.912101e-55
MsaG008424	MsaG008699	0.864665	2.059949e-64	1.920260e-61
MsaG008424	MsaG008314	0.811963	9.244699e-51	1.656407e-48
MsaG008424	MsaG008985	0.808103	6.211402e-50	1.013336e-47
MsaG008424	MsaG014519	0.810481	1.931149e-50	3.336788e-48
MsaG008424	MsaG012002	0.882156	2.808541e-70	5.607409e-67
MsaG008424	MsaG012745	0.833760	8.044343e-56	2.596812e-53
MsaG008424	MsaG015535	0.813310	4.703968e-51	8.715080e-49
MsaG008424	MsaG022641	0.855740	9.980191e-62	6.622114e-59
MsaG008424	MsaG018327	0.831068	3.708815e-55	1.106706e-52
MsaG008424	MsaG019332	0.836061	2.131305e-56	7.369669e-54
MsaG008424	MsaG019826	0.831822	2.424874e-55	7.397032e-53
MsaG008424	MsaG017922	0.822456	4.134732e-53	9.706697e-51
MsaG008424	MsaG027471	0.827034	3.485224e-54	9.275950e-52
MsaG008424	MsaG027150	0.823264	2.685307e-53	6.443492e-51
MsaG008424	MsaG026769	0.813414	4.463625e-51	8.291669e-49
MsaG008424	MsaG026125	0.854140	2.891663e-61	1.811718e-58
MsaG008424	MsaG031534	0.818057	4.166419e-52	8.709137e-50
MsaG008424	MsaG031416	0.880368	1.229073e-69	2.256739e-66
MsaG008424	MsaG030964	0.827191	3.198599e-54	8.550537e-52
MsaG008424	MsaG030749	0.820236	1.336928e-52	2.959030e-50
MsaG008424	MsaG033663	0.859688	6.825860e-63	5.244379e-60
MsaG008424	MsaG033107	0.839992	2.100499e-57	8.197843e-55
MsaG008424	MsaG032454	0.830198	6.043422e-55	1.758966e-52
MsaG008424	MsaG032904	0.805303	2.408939e-49	3.677862e-47
MsaG008424	MsaG030574	0.810670	1.758324e-50	3.052130e-48
MsaG008424	MsaG037042	0.800676	2.156570e-48	2.960764e-46
MsaG008424	MsaG036285	0.836841	1.352366e-56	4.787528e-54
MsaG008424	MsaG036777	0.827330	2.963085e-54	7.952072e-52
MsaG008424	MsaG034802	0.800210	2.680558e-48	3.641385e-46
MsaG008424	MsaG036986	0.869398	6.473994e-66	7.315515e-63
MsaG008424	MsaG043110	0.827129	3.308023e-54	8.828037e-52
MsaG008424	MsaG043553	0.838534	4.997243e-57	1.863468e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008424	MtrunA17_Chr7g0274141	51.493	134	45	3	43	176	162	275	1.19e-23	98.6
MsaG008424	MtrunA17_Chr5g0401301	89.130	46	5	0	219	264	333	378	1.58e-22	95.9
MsaG008424	MtrunA17_Chr1g0206881	97.500	40	1	0	171	210	191	230	7.02e-19	85.5
MsaG008424	MtrunA17_Chr4g0054511	97.500	40	1	0	171	210	191	230	7.18e-19	85.5
MsaG008424	MtrunA17_Chr3g0140821	97.500	40	1	0	171	210	191	230	7.39e-19	85.5
MsaG008424	MtrunA17_Chr8g0378821	97.500	40	1	0	171	210	191	230	8.15e-19	85.5
MsaG008424	MtrunA17_Chr7g0253411	92.500	40	3	0	171	210	191	230	8.19e-18	82.4
MsaG008424	MtrunA17_Chr1g0190761	48.031	127	43	4	48	170	177	284	1.61e-16	78.6
MsaG008424	MtrunA17_Chr6g0461281	82.051	39	7	0	172	210	193	231	7.35e-15	73.9
MsaG008424	MtrunA17_Chr2g0300671	78.947	38	8	0	171	208	186	223	1.14e-12	67.4
MsaG008424	MtrunA17_Chr2g0300491	78.947	38	8	0	171	208	186	223	1.18e-12	67.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008424	AT5G19780.1	97.500	40	1	0	171	210	191	230	1.20e-18	85.5
MsaG008424	AT5G19770.1	97.500	40	1	0	171	210	191	230	1.20e-18	85.5
MsaG008424	AT1G64740.1	94.872	39	2	0	171	209	191	229	1.44e-17	82.4
MsaG008424	AT4G14960.1	90.000	40	4	0	171	210	191	230	1.68e-17	82.0
MsaG008424	AT4G14960.2	90.000	40	4	0	171	210	191	230	2.39e-17	81.6
MsaG008424	AT1G50010.1	90.000	40	4	0	171	210	191	230	3.81e-17	80.9
MsaG008424	AT1G04820.1	90.000	40	4	0	171	210	191	230	3.81e-17	80.9
MsaG008424	AT5G24800.1	35.821	134	60	3	48	175	88	201	3.26e-15	73.9

Find 48 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACAATCCTTTCTAATCTTT+TGG	0.173079	2:+34633472	MsaT008424.1:CDS
CTTTCAGGATGCTCCAAAAT+AGG	0.198060	2:+34633947	MsaT008424.1:intron
CAATTATCTTGAAGTGAAAA+TGG	0.219376	2:-34633535	None:intergenic
GTTTAGCTGATTCCCTATTT+TGG	0.286405	2:-34633960	None:intergenic
AAGGGAAGAGAAAGCTTCTC+AGG	0.359196	2:+34633756	MsaT008424.1:CDS
TGAAGGTGGTGCTGATTGTT+TGG	0.361551	2:+34634988	MsaT008424.1:CDS
TATTAGGTCTCTACATTAAG+AGG	0.369226	2:+34634137	MsaT008424.1:intron
CACTGATGTGGCCGTGCTCT+TGG	0.374923	2:+34634728	MsaT008424.1:CDS
GAGCTAGCAACCAATGTATC+AGG	0.384263	2:-34635043	None:intergenic
GCTTCTTGCAATGTTTCATC+AGG	0.394608	2:-34634947	None:intergenic
TCACTTCAAGATAATTGAAA+TGG	0.396522	2:+34633541	MsaT008424.1:CDS
TTTCAGGATGCTCCAAAATA+GGG	0.416451	2:+34633948	MsaT008424.1:intron
AGCCTGCTCTCCATCAATTC+CGG	0.422382	2:-34633506	None:intergenic
AGGCGATCTATGACATTTGT+AGG	0.426144	2:+34634757	MsaT008424.1:CDS
CAACTTATACCAACTTGAAC+AGG	0.431265	2:+34634802	MsaT008424.1:CDS
CAAGGTACCACCGGAATTGA+TGG	0.432913	2:+34633496	MsaT008424.1:CDS
CAGTACCTTACTCTTCTTGA+CGG	0.444119	2:-34633575	None:intergenic
CAGGGAGAGGTTAATATGAA+TGG	0.457103	2:+34633775	MsaT008424.1:CDS
TGAAACATTGCAAGAAGCAT+TGG	0.478730	2:+34634952	MsaT008424.1:CDS
TTGTTACAATCCTGATACAT+TGG	0.480675	2:+34635033	MsaT008424.1:CDS
TAGAACCGTCAAGAAGAGTA+AGG	0.491702	2:+34633570	MsaT008424.1:CDS
CTGTTCAAGTTGGTATAAGT+TGG	0.510056	2:-34634801	None:intergenic
CCTTGTCCAAAAGATTAGAA+AGG	0.511316	2:-34633478	None:intergenic
TCAATCATAGAGAAGCTTGT+CGG	0.517765	2:+34633450	MsaT008424.1:CDS
TTGGATTATGCTTGTGGTGA+AGG	0.518389	2:+34634971	MsaT008424.1:CDS
AGAAGCTTTCTCTTCCCTTG+AGG	0.522668	2:-34633752	None:intergenic
CACCGGAATTGATGGAGAGC+AGG	0.524298	2:+34633504	MsaT008424.1:CDS
AGAAGAGAAAGCATAAGACT+TGG	0.526009	2:-34634055	None:intergenic
AGAGAAAGCTTCTCAGGGAG+AGG	0.567096	2:+34633762	MsaT008424.1:CDS
AATGTTTCATCAGGAACACT+AGG	0.568085	2:-34634938	None:intergenic
TGATATCAACCTGTTCAAGT+TGG	0.577755	2:-34634811	None:intergenic
ACAATCAGGTCAACGACAAG+TGG	0.581189	2:+34633727	MsaT008424.1:intron
TCTTCTCGAGCACACTGATG+TGG	0.589746	2:+34634716	MsaT008424.1:CDS
GATTATGCTTGTGGTGAAGG+TGG	0.591952	2:+34634974	MsaT008424.1:CDS
CGCCTCATTATCCAAGAGCA+CGG	0.592409	2:-34634739	None:intergenic
GGCCGTGCTCTTGGATAATG+AGG	0.598449	2:+34634737	MsaT008424.1:CDS
AAATACTAAGCTTGAAACAC+AGG	0.600462	2:+34634010	MsaT008424.1:CDS
AGGGAAGAGAAAGCTTCTCA+GGG	0.602774	2:+34633757	MsaT008424.1:CDS
CAACGACAAGTGGATCCTCA+AGG	0.604416	2:+34633737	MsaT008424.1:CDS
GGAGATCTCTTGATATTGAG+AGG	0.607664	2:+34634778	MsaT008424.1:CDS
GGATTGTAACAATTCCCTTG+TGG	0.608596	2:-34635022	None:intergenic
TTGGAGATTACTACTCCACA+AGG	0.615549	2:+34635007	MsaT008424.1:CDS
AACGACAAGTGGATCCTCAA+GGG	0.631547	2:+34633738	MsaT008424.1:CDS
GAAGCATTGGATTATGCTTG+TGG	0.636390	2:+34634965	MsaT008424.1:CDS
CTGCTCTCCATCAATTCCGG+TGG	0.639314	2:-34633503	None:intergenic
TTTGATTCTTCAATGCACTG+AGG	0.654828	2:-34634913	None:intergenic
CTGATGCAAAACGAGTCAAG+AGG	0.683668	2:+34633809	MsaT008424.1:CDS
TGGAGATTACTACTCCACAA+GGG	0.734669	2:+34635008	MsaT008424.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	34632954	34635087	34632954	ID=MsaG008424
Chr2	mRNA	34632954	34635087	34632954	ID=MsaT008424.1;Parent=MsaG008424
Chr2	exon	34632954	34632956	34632954	ID=MsaT008424.1.exon1;Parent=MsaT008424.1
Chr2	CDS	34632954	34632956	34632954	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34633449	34633591	34633449	ID=MsaT008424.1.exon2;Parent=MsaT008424.1
Chr2	CDS	34633449	34633591	34633449	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34633735	34633830	34633735	ID=MsaT008424.1.exon3;Parent=MsaT008424.1
Chr2	CDS	34633735	34633830	34633735	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34633954	34634086	34633954	ID=MsaT008424.1.exon4;Parent=MsaT008424.1
Chr2	CDS	34633954	34634086	34633954	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34634143	34634268	34634143	ID=MsaT008424.1.exon5;Parent=MsaT008424.1
Chr2	CDS	34634143	34634268	34634143	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34634699	34634823	34634699	ID=MsaT008424.1.exon6;Parent=MsaT008424.1
Chr2	CDS	34634699	34634823	34634699	ID=cds.MsaT008424.1;Parent=MsaT008424.1
Chr2	exon	34634907	34635087	34634907	ID=MsaT008424.1.exon7;Parent=MsaT008424.1
Chr2	CDS	34634907	34635087	34634907	ID=cds.MsaT008424.1;Parent=MsaT008424.1

Gene Sequence

>MsaT008424.1

ATGCTCAATCATAGAGAAGCTTGTCGGACAATCCTTTCTAATCTTTTGGACAAGGTACCACCGGAATTGATGGAGAGCAGGCTATATATCCATTTTCACTTCAAGATAATTGAAATGGTGATTTTAGAACCGTCAAGAAGAGTAAGGTCAACGACAAGTGGATCCTCAAGGGAAGAGAAAGCTTCTCAGGGAGAGGTTAATATGAATGGAGACAAGAACCCTGATGCAAAACGAGTCAAGAGGATGCTCCAAAATAGGGAATCAGCTAAACGCTCGAGAGATAGAAAGATAGCTGAAAAAATACTAAGCTTGAAACACAGGTCTGCATGCATGCTTTTTAAATCCAAGTCTTATGCTTTCTCTTCTCTGATCTCTGTCTCTACATTAAGAGGTGATAATTCTTCATTGTTGAAGCGTTTATCAGATGTGAGTCAAAAATATGACAATTCTGCTGTTGACAACAGAATATTAAACGCTGATTTTGAAACAATAAAAGCGAAGTGTTCTATGACACATTCTCTTCTCGAGCACACTGATGTGGCCGTGCTCTTGGATAATGAGGCGATCTATGACATTTGTAGGAGATCTCTTGATATTGAGAGGCCAACTTATACCAACTTGAACAGATTCAACCTCAGTGCATTGAAGAATCAAAAGCCTAGTGTTCCTGATGAAACATTGCAAGAAGCATTGGATTATGCTTGTGGTGAAGGTGGTGCTGATTGTTTGGAGATTACTACTCCACAAGGGAATTGTTACAATCCTGATACATTGGTTGCTAGCTCATGCTTCTTATGCATTCAATAG

Protein sequence

>MsaT008424.1

MLNHREACRTILSNLLDKVPPELMESRLYIHFHFKIIEMVILEPSRRVRSTTSGSSREEKASQGEVNMNGDKNPDAKRVKRMLQNRESAKRSRDRKIAEKILSLKHRSACMLFKSKSYAFSSLISVSTLRGDNSSLLKRLSDVSQKYDNSAVDNRILNADFETIKAKCSMTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRFNLSALKNQKPSVPDETLQEALDYACGEGGADCLEITTPQGNCYNPDTLVASSCFLCIQ*