AlfalfaGEDB | MsaG008638

M. sativa ssp. caerulea / MsaG008638

KEGG: K06276
GO: GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008289 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019220 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033674 GO:0035091 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070300 GO:0071704 GO:0071944 GO:0080090 GO:0140096 GO:1901564
PFAM: PF00069.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008638	PNX71846.1	88.235	85	4	1	1	79	125	209	4.91e-44	151

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008638	sp\|Q9XF67\|PDPK1_ARATH	85.882	85	6	1	1	79	119	203	1.34e-43	149

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008638	A0A2K3KZZ3	88.235	85	4	1	1	79	125	209	2.35e-44	151

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000140	MsaG008638	0.835434	3.066955e-56	1.040777e-53
MsaG004745	MsaG008638	0.811031	1.470053e-50	2.574379e-48
MsaG004937	MsaG008638	0.824881	1.125345e-53	2.821624e-51
MsaG004939	MsaG008638	0.807497	8.343487e-50	1.341503e-47
MsaG007291	MsaG008638	0.823212	2.762277e-53	6.618421e-51
MsaG007778	MsaG008638	0.807421	8.661486e-50	1.390079e-47
MsaG007816	MsaG008638	0.821838	5.740637e-53	1.325538e-50
MsaG008372	MsaG008638	0.802317	9.975988e-49	1.421561e-46
MsaG008636	MsaG008638	0.875482	6.173667e-68	9.070950e-65
MsaG008638	MsaG008639	0.856325	6.740965e-62	4.569992e-59
MsaG008638	MsaG010081	0.842565	4.452896e-58	1.885639e-55
MsaG008638	MsaG010427	0.802588	8.778346e-49	1.258673e-46
MsaG008638	MsaG015314	0.810797	1.650851e-50	2.874517e-48
MsaG008638	MsaG020714	0.801643	1.370617e-48	1.923271e-46
MsaG008638	MsaG029051	0.822739	3.555678e-53	8.411617e-51
MsaG008638	MsaG031568	0.824140	1.678242e-53	4.123733e-51
MsaG008638	MsaG033734	0.811139	1.393276e-50	2.446373e-48
MsaG008638	MsaG034388	0.807497	8.343487e-50	1.341503e-47
MsaG008638	MsaG038696	0.807614	7.884603e-50	1.271236e-47
MsaG008638	MsaG039859	0.804658	3.281338e-49	4.935279e-47
MsaG008638	MsaG044749	0.827915	2.147449e-54	5.858605e-52
MsaG008638	MsaG045062	0.814223	2.967091e-51	5.624695e-49
MsaG008638	MsaG046114	0.802896	7.588687e-49	1.095766e-46
MsaG008638	MsaG002839	0.801937	1.193673e-48	1.686195e-46
MsaG008638	MsaG000809	0.804177	4.128010e-49	6.140092e-47
MsaG008638	MsaG012735	0.812330	7.693027e-51	1.390918e-48
MsaG008638	MsaG014392	0.811199	1.352545e-50	2.378331e-48
MsaG008638	MsaG022126	0.808767	4.489427e-50	7.442247e-48
MsaG008638	MsaG021388	0.827987	2.064407e-54	5.643318e-52
MsaG008638	MsaG033550	0.807297	9.197653e-50	1.471755e-47
MsaG008638	MsaG031954	0.812950	5.639051e-51	1.035397e-48
MsaG008638	MsaG034989	0.809200	3.630237e-50	6.080661e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008638	MtrunA17_Chr1g0197721	88.235	85	4	1	1	79	126	210	1.57e-45	151
MsaG008638	MtrunA17_Chr8g0369091	56.923	65	20	1	6	62	679	743	5.89e-18	76.3
MsaG008638	MtrunA17_Chr4g0059751	43.590	78	38	1	1	72	171	248	6.00e-18	76.3
MsaG008638	MtrunA17_Chr8g0346071	45.000	80	37	2	1	73	92	171	3.43e-16	71.2
MsaG008638	MtrunA17_Chr4g0013131	45.588	68	32	1	1	63	87	154	3.65e-16	71.2
MsaG008638	MtrunA17_Chr2g0304111	49.275	69	29	1	1	63	98	166	3.71e-16	71.2
MsaG008638	MtrunA17_Chr2g0309421	47.143	70	29	1	1	62	252	321	3.92e-16	71.2
MsaG008638	MtrunA17_Chr8g0346081	45.000	80	37	2	1	73	92	171	4.10e-16	71.2
MsaG008638	MtrunA17_Chr4g0030361	52.308	65	23	1	6	62	389	453	4.44e-16	70.9
MsaG008638	MtrunA17_Chr7g0261491	48.611	72	32	1	13	79	213	284	4.59e-16	70.9
MsaG008638	MtrunA17_Chr2g0285711	47.143	70	29	1	1	62	164	233	4.81e-16	70.9
MsaG008638	MtrunA17_Chr2g0312641	54.000	50	23	0	13	62	191	240	1.23e-15	69.7
MsaG008638	MtrunA17_Chr7g0245031	41.558	77	39	1	1	71	223	299	1.32e-15	69.7
MsaG008638	MtrunA17_Chr5g0428031	52.239	67	26	1	3	63	86	152	1.32e-15	69.7
MsaG008638	MtrunA17_Chr6g0478601	65.957	47	16	0	20	66	211	257	2.09e-15	68.9
MsaG008638	MtrunA17_Chr4g0074111	45.588	68	32	1	1	63	93	160	2.22e-15	68.9
MsaG008638	MtrunA17_Chr4g0018201	47.222	72	32	1	1	66	834	905	2.67e-15	68.9
MsaG008638	MtrunA17_Chr8g0381091	45.714	70	30	1	1	62	160	229	3.21e-15	68.6
MsaG008638	MtrunA17_Chr1g0183651	52.459	61	29	0	13	73	213	273	3.31e-15	68.6
MsaG008638	MtrunA17_Chr5g0428981	61.224	49	19	0	18	66	861	909	4.66e-15	68.2
MsaG008638	MtrunA17_Chr8g0335351	47.143	70	29	1	1	62	447	516	4.78e-15	68.2
MsaG008638	MtrunA17_Chr3g0080101	42.857	70	32	1	1	62	492	561	6.05e-15	67.8
MsaG008638	MtrunA17_Chr5g0441011	46.377	69	31	1	1	63	88	156	1.02e-14	67.0
MsaG008638	MtrunA17_Chr7g0250631	45.714	70	30	1	1	62	441	510	1.30e-14	67.0
MsaG008638	MtrunA17_Chr1g0167351	52.459	61	29	0	13	73	203	263	1.82e-14	66.6
MsaG008638	MtrunA17_Chr2g0284011	44.118	68	33	1	1	63	87	154	1.84e-14	66.2
MsaG008638	MtrunA17_Chr1g0153321	50.877	57	28	0	20	76	208	264	1.89e-14	66.2
MsaG008638	MtrunA17_Chr7g0234641	41.333	75	36	1	2	68	96	170	1.97e-14	66.2
MsaG008638	MtrunA17_Chr3g0132671	40.506	79	41	1	1	73	124	202	2.06e-14	66.2
MsaG008638	MtrunA17_Chr3g0114511	50.000	66	30	1	1	63	107	172	2.15e-14	66.2
MsaG008638	MtrunA17_Chr3g0107011	35.294	85	50	1	1	80	89	173	2.53e-14	65.9
MsaG008638	MtrunA17_Chr6g0468751	41.772	79	40	1	1	73	94	172	2.93e-14	65.9
MsaG008638	MtrunA17_Chr1g0179101	47.143	70	29	2	1	62	547	616	2.97e-14	65.9
MsaG008638	MtrunA17_Chr6g0453681	41.772	79	40	1	1	73	94	172	3.29e-14	65.9
MsaG008638	MtrunA17_Chr7g0227331	45.714	70	30	1	1	62	309	378	4.08e-14	65.5
MsaG008638	MtrunA17_Chr1g0167311	50.847	59	29	0	15	73	210	268	4.42e-14	65.5
MsaG008638	MtrunA17_Chr4g0063311	38.571	70	35	1	1	62	173	242	4.85e-14	65.1
MsaG008638	MtrunA17_Chr1g0188031	43.478	69	33	1	1	63	97	165	5.74e-14	65.1
MsaG008638	MtrunA17_Chr2g0321101	61.905	42	16	0	21	62	197	238	5.86e-14	65.1
MsaG008638	MtrunA17_Chr2g0327561	50.794	63	23	2	8	62	710	772	6.45e-14	65.1
MsaG008638	MtrunA17_Chr7g0266031	62.791	43	16	0	20	62	596	638	7.16e-14	64.7
MsaG008638	MtrunA17_Chr8g0338741	45.902	61	30	1	2	62	117	174	7.60e-14	64.7
MsaG008638	MtrunA17_Chr7g0244521	42.857	77	38	2	1	72	87	162	9.26e-14	64.3
MsaG008638	MtrunA17_Chr4g0072831	43.478	69	33	1	1	63	64	132	9.75e-14	63.9
MsaG008638	MtrunA17_Chr3g0135951	53.704	54	25	0	13	66	187	240	1.25e-13	63.9
MsaG008638	MtrunA17_Chr4g0063881	44.776	67	31	1	3	63	88	154	1.38e-13	63.9
MsaG008638	MtrunA17_Chr8g0356291	48.980	49	25	0	14	62	225	273	1.45e-13	63.9
MsaG008638	MtrunA17_Chr2g0299781	48.333	60	31	0	15	74	208	267	1.70e-13	63.5
MsaG008638	MtrunA17_Chr1g0187581	47.541	61	32	0	13	73	210	270	1.97e-13	63.5
MsaG008638	MtrunA17_Chr4g0069301	44.928	69	32	1	1	63	101	169	2.36e-13	63.2
MsaG008638	MtrunA17_Chr1g0205421	45.588	68	32	1	1	63	87	154	2.71e-13	63.2
MsaG008638	MtrunA17_Chr3g0107051	43.939	66	32	1	3	63	98	163	4.62e-13	62.4
MsaG008638	MtrunA17_Chr5g0402661	41.333	75	36	2	1	67	89	163	7.60e-13	61.6
MsaG008638	MtrunA17_Chr1g0150321	41.176	68	35	1	1	63	88	155	1.04e-12	61.2
MsaG008638	MtrunA17_Chr2g0284031	39.706	68	36	1	1	63	106	173	1.05e-12	61.6
MsaG008638	MtrunA17_Chr6g0449401	60.976	41	16	0	22	62	406	446	1.24e-12	61.2
MsaG008638	MtrunA17_Chr6g0453671	41.558	77	39	1	3	73	96	172	1.29e-12	61.2
MsaG008638	MtrunA17_Chr4g0001331	41.176	68	35	1	1	63	95	162	1.33e-12	61.2
MsaG008638	MtrunA17_Chr8g0379091	39.706	68	36	1	1	63	101	168	1.37e-12	61.2
MsaG008638	MtrunA17_Chr2g0290691	38.571	70	35	1	1	62	281	350	1.44e-12	61.2
MsaG008638	MtrunA17_Chr8g0353621	40.741	81	42	1	1	75	85	165	1.93e-12	60.1
MsaG008638	MtrunA17_Chr3g0091291	44.118	68	33	1	1	63	35	102	2.27e-12	59.3
MsaG008638	MtrunA17_Chr5g0432471	41.176	68	35	1	1	63	87	154	2.33e-12	60.5
MsaG008638	MtrunA17_Chr2g0333821	41.176	68	35	1	1	63	89	156	2.84e-12	60.1
MsaG008638	MtrunA17_Chr4g0047201	56.098	41	18	0	23	63	308	348	2.87e-12	60.1
MsaG008638	MtrunA17_Chr7g0248461	42.105	57	33	0	15	71	136	192	3.90e-12	59.7
MsaG008638	MtrunA17_Chr1g0190131	38.961	77	42	1	1	72	85	161	4.37e-12	59.3
MsaG008638	MtrunA17_Chr4g0032761	50.000	42	21	0	21	62	125	166	4.83e-12	59.7
MsaG008638	MtrunA17_Chr5g0432491	42.029	69	34	1	1	63	98	166	5.00e-12	59.3
MsaG008638	MtrunA17_Chr3g0091421	38.272	81	45	1	1	76	87	167	5.42e-12	58.9
MsaG008638	MtrunA17_Chr8g0348481	40.351	57	34	0	15	71	135	191	7.90e-12	58.9
MsaG008638	MtrunA17_Chr3g0091311	44.776	67	32	1	1	62	87	153	1.00e-11	58.2
MsaG008638	MtrunA17_Chr8g0351491	43.421	76	36	2	1	69	91	166	1.48e-11	57.8
MsaG008638	MtrunA17_Chr1g0166101	45.161	62	28	1	8	63	107	168	1.58e-11	58.2
MsaG008638	MtrunA17_Chr2g0302431	42.647	68	33	1	1	62	95	162	1.84e-11	57.8
MsaG008638	MtrunA17_Chr4g0047211	53.659	41	19	0	23	63	147	187	2.26e-11	57.8
MsaG008638	MtrunA17_Chr4g0047191	53.659	41	19	0	23	63	152	192	2.29e-11	57.4
MsaG008638	MtrunA17_Chr2g0326531	35.065	77	48	1	6	80	213	289	3.63e-11	57.0
MsaG008638	MtrunA17_Chr3g0125381	54.000	50	23	0	14	63	46	95	4.04e-11	56.2
MsaG008638	MtrunA17_Chr5g0403721	40.580	69	32	2	4	63	62	130	5.50e-11	56.6
MsaG008638	MtrunA17_Chr2g0286501	34.118	85	48	2	1	79	118	200	5.59e-11	56.6
MsaG008638	MtrunA17_Chr3g0140631	44.000	75	35	2	1	68	112	186	5.84e-11	56.2
MsaG008638	MtrunA17_Chr5g0399911	40.000	75	37	2	1	67	90	164	6.16e-11	56.2
MsaG008638	MtrunA17_Chr3g0091281	44.776	67	32	1	1	62	87	153	8.09e-11	55.5
MsaG008638	MtrunA17_Chr4g0038091	45.283	53	29	0	23	75	124	176	9.38e-11	55.8
MsaG008638	MtrunA17_Chr4g0038501	45.283	53	29	0	23	75	124	176	9.95e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG008638	AT5G04510.3	85.882	85	6	1	1	79	119	203	9.81e-46	148
MsaG008638	AT5G04510.2	85.882	85	6	1	1	79	119	203	7.17e-45	148
MsaG008638	AT5G04510.1	85.882	85	6	1	1	79	119	203	1.36e-44	149
MsaG008638	AT3G10540.1	83.529	85	8	1	1	79	120	204	3.39e-43	145
MsaG008638	AT5G58140.3	51.190	84	31	4	6	80	657	739	1.79e-18	78.2
MsaG008638	AT5G58140.6	51.190	84	31	4	6	80	657	739	1.81e-18	78.2
MsaG008638	AT5G58140.7	51.190	84	31	4	6	80	657	739	1.81e-18	78.2
MsaG008638	AT5G58140.5	51.190	84	31	4	6	80	657	739	1.81e-18	78.2
MsaG008638	AT5G58140.2	51.190	84	31	4	6	80	657	739	1.81e-18	78.2
MsaG008638	AT5G58140.1	51.190	84	31	4	6	80	657	739	1.81e-18	78.2
MsaG008638	AT4G24400.2	47.500	80	35	2	3	76	86	164	9.59e-18	75.9
MsaG008638	AT4G24400.1	47.500	80	35	2	3	76	86	164	9.91e-18	75.9
MsaG008638	AT2G26980.2	53.731	67	25	1	3	63	91	157	7.65e-17	72.4
MsaG008638	AT2G26980.4	53.731	67	25	1	3	63	101	167	1.97e-16	72.4
MsaG008638	AT2G26980.3	53.731	67	25	1	3	63	91	157	2.24e-16	72.4
MsaG008638	AT2G26980.1	53.731	67	25	1	3	63	91	157	2.48e-16	72.0
MsaG008638	AT2G26980.5	53.731	67	25	1	3	63	91	157	2.73e-16	72.0
MsaG008638	AT4G14350.3	50.704	71	30	1	13	78	212	282	3.35e-16	71.6
MsaG008638	AT4G14350.2	50.704	71	30	1	13	78	212	282	3.35e-16	71.6
MsaG008638	AT4G14350.1	50.704	71	30	1	13	78	212	282	3.35e-16	71.6
MsaG008638	AT4G14350.4	50.704	71	30	1	13	78	212	282	3.35e-16	71.6
MsaG008638	AT5G62310.1	48.611	72	31	1	1	66	829	900	3.66e-16	71.6
MsaG008638	AT3G12690.1	47.143	70	29	1	1	62	260	329	3.85e-16	71.6
MsaG008638	AT3G12690.3	47.143	70	29	1	1	62	260	329	3.85e-16	71.6
MsaG008638	AT3G12690.2	47.143	70	29	1	1	62	260	329	3.85e-16	71.6
MsaG008638	AT1G30270.3	50.746	67	27	1	3	63	11	77	4.31e-16	71.2
MsaG008638	AT1G30270.1	50.746	67	27	1	3	63	108	174	5.22e-16	71.2
MsaG008638	AT1G30270.2	50.746	67	27	1	3	63	108	174	5.30e-16	71.2
MsaG008638	AT3G23310.1	57.143	56	24	0	13	68	213	268	5.52e-16	71.2
MsaG008638	AT1G01140.2	47.826	69	30	1	1	63	94	162	8.13e-16	70.5
MsaG008638	AT1G01140.1	47.826	69	30	1	1	63	94	162	8.28e-16	70.5
MsaG008638	AT1G01140.3	47.826	69	30	1	1	63	94	162	8.47e-16	70.5
MsaG008638	AT2G34650.1	47.143	70	29	1	1	62	155	224	9.52e-16	70.5
MsaG008638	AT5G21326.1	47.826	69	30	1	1	63	88	156	9.62e-16	70.5
MsaG008638	AT1G30640.2	50.877	57	28	0	13	69	213	269	1.39e-15	70.1
MsaG008638	AT1G30640.1	50.877	57	28	0	13	69	213	269	1.39e-15	70.1
MsaG008638	AT1G30640.3	47.541	61	32	0	13	73	120	180	1.49e-15	70.1
MsaG008638	AT1G16440.1	44.286	70	31	1	1	62	190	259	1.94e-15	69.7
MsaG008638	AT5G45820.1	47.059	68	31	1	1	63	87	154	1.97e-15	69.7
MsaG008638	AT1G48490.3	63.830	47	17	0	20	66	928	974	2.90e-15	69.3
MsaG008638	AT1G48490.2	63.830	47	17	0	20	66	928	974	2.90e-15	69.3
MsaG008638	AT1G48490.1	63.830	47	17	0	20	66	928	974	2.90e-15	69.3
MsaG008638	AT1G48490.4	63.830	47	17	0	20	66	929	975	2.90e-15	69.3
MsaG008638	AT1G79250.1	44.286	70	31	1	1	62	221	290	3.01e-15	68.9
MsaG008638	AT1G79250.3	44.286	70	31	1	1	62	221	290	3.01e-15	68.9
MsaG008638	AT1G79250.2	44.286	70	31	1	1	62	221	290	3.01e-15	68.9
MsaG008638	AT1G79250.4	44.286	70	31	1	1	62	221	290	3.01e-15	68.9
MsaG008638	AT3G17850.1	63.265	49	18	0	18	66	980	1028	5.57e-15	68.2
MsaG008638	AT2G20470.2	52.459	61	29	0	13	73	217	277	6.07e-15	68.2
MsaG008638	AT2G20470.1	52.459	61	29	0	13	73	217	277	6.07e-15	68.2
MsaG008638	AT1G03920.2	52.459	61	29	0	13	73	117	177	6.43e-15	68.2
MsaG008638	AT2G20470.3	52.459	61	29	0	13	73	217	277	6.73e-15	68.2
MsaG008638	AT1G03920.1	52.459	61	29	0	13	73	230	290	7.24e-15	68.2
MsaG008638	AT1G03920.3	52.459	61	29	0	13	73	230	290	7.24e-15	68.2
MsaG008638	AT2G25090.1	47.826	69	30	1	1	63	91	159	8.66e-15	67.8
MsaG008638	AT2G26700.1	40.000	70	34	1	1	62	164	233	1.03e-14	67.4
MsaG008638	AT4G30960.1	45.588	68	32	1	1	63	99	166	1.26e-14	67.4
MsaG008638	AT2G44830.2	47.143	70	29	1	1	62	438	507	1.28e-14	67.4
MsaG008638	AT2G44830.3	47.143	70	29	1	1	62	438	507	1.28e-14	67.4
MsaG008638	AT2G44830.1	47.143	70	29	1	1	62	438	507	1.28e-14	67.4
MsaG008638	AT1G45160.2	61.702	47	18	0	20	66	770	816	1.88e-14	67.0
MsaG008638	AT1G45160.1	61.702	47	18	0	20	66	770	816	1.89e-14	67.0
MsaG008638	AT3G29160.3	43.038	79	39	1	1	73	95	173	1.93e-14	66.6
MsaG008638	AT3G29160.1	43.038	79	39	1	1	73	95	173	2.34e-14	66.6
MsaG008638	AT3G29160.2	43.038	79	39	1	1	73	95	173	2.34e-14	66.6
MsaG008638	AT5G01810.3	44.000	75	36	2	3	72	89	162	2.61e-14	66.2
MsaG008638	AT4G33080.1	53.571	56	26	0	13	68	187	242	2.74e-14	66.2
MsaG008638	AT5G01810.1	44.000	75	36	2	3	72	89	162	2.79e-14	66.2
MsaG008638	AT5G01810.2	44.000	75	36	2	3	72	89	162	2.79e-14	66.2
MsaG008638	AT5G21222.1	41.558	77	39	1	1	71	88	164	2.86e-14	66.2
MsaG008638	AT5G21222.2	41.558	77	39	1	1	71	88	164	2.86e-14	66.2
MsaG008638	AT5G21222.4	41.558	77	39	1	1	71	88	164	2.86e-14	66.2
MsaG008638	AT5G21222.3	41.558	77	39	1	1	71	88	164	2.86e-14	66.2
MsaG008638	AT4G33080.2	53.571	56	26	0	13	68	187	242	3.04e-14	66.2
MsaG008638	AT3G01090.2	41.772	79	40	1	1	73	117	195	3.15e-14	66.2
MsaG008638	AT5G03640.2	48.571	70	28	2	1	62	616	685	3.16e-14	66.2
MsaG008638	AT5G03640.1	48.571	70	28	2	1	62	616	685	3.16e-14	66.2
MsaG008638	AT5G10930.1	47.059	68	31	1	1	63	88	155	3.34e-14	66.2
MsaG008638	AT3G01090.3	41.772	79	40	1	1	73	94	172	3.46e-14	65.9
MsaG008638	AT3G01090.1	41.772	79	40	1	1	73	94	172	3.46e-14	65.9
MsaG008638	AT2G36350.1	45.714	70	30	2	1	62	634	703	3.74e-14	65.9
MsaG008638	AT5G55910.2	41.429	70	33	1	1	62	184	253	4.32e-14	65.9
MsaG008638	AT5G55910.1	41.429	70	33	1	1	62	184	253	4.32e-14	65.9
MsaG008638	AT1G53700.1	59.524	42	17	0	21	62	197	238	4.34e-14	65.9
MsaG008638	AT5G35410.2	46.377	69	31	1	1	63	86	154	4.49e-14	65.5
MsaG008638	AT3G52890.2	45.714	70	30	2	1	62	613	682	4.95e-14	65.5
MsaG008638	AT3G52890.4	45.714	70	30	2	1	62	613	682	4.95e-14	65.5
MsaG008638	AT3G52890.1	45.714	70	30	2	1	62	613	682	4.95e-14	65.5
MsaG008638	AT3G52890.3	45.714	70	30	2	1	62	613	682	4.95e-14	65.5
MsaG008638	AT5G35410.1	46.377	69	31	1	1	63	86	154	5.33e-14	65.5
MsaG008638	AT3G27580.2	45.714	70	30	2	1	62	257	326	5.40e-14	65.5
MsaG008638	AT3G27580.1	45.714	70	30	2	1	62	257	326	5.40e-14	65.5
MsaG008638	AT3G17510.2	46.377	69	31	1	1	63	15	83	5.57e-14	65.5
MsaG008638	AT3G17510.1	46.377	69	31	1	1	63	95	163	6.67e-14	65.1
MsaG008638	AT5G40030.1	43.056	72	29	2	1	62	189	258	7.75e-14	65.1
MsaG008638	AT3G14370.1	57.143	42	18	0	21	62	191	232	9.67e-14	64.7
MsaG008638	AT5G09890.1	45.312	64	35	0	13	76	195	258	1.03e-13	64.7
MsaG008638	AT5G09890.2	45.312	64	35	0	13	76	195	258	1.07e-13	64.7
MsaG008638	AT2G30360.1	42.029	69	34	1	1	63	97	165	1.08e-13	64.7
MsaG008638	AT4G26610.1	40.000	70	34	1	1	62	198	267	1.14e-13	64.7
MsaG008638	AT5G57565.2	39.706	68	36	1	1	63	34	101	1.19e-13	61.6
MsaG008638	AT5G57565.6	39.706	68	36	1	1	63	34	101	1.19e-13	61.6
MsaG008638	AT3G08730.1	37.662	77	42	1	1	71	209	285	1.32e-13	64.3
MsaG008638	AT3G08730.2	37.662	77	42	1	1	71	209	285	1.32e-13	64.3
MsaG008638	AT5G57565.5	39.706	68	36	1	1	63	34	101	2.08e-13	61.2
MsaG008638	AT5G57565.1	39.706	68	36	1	1	63	34	101	2.08e-13	61.2
MsaG008638	AT3G44610.1	57.143	42	18	0	21	62	182	223	3.73e-13	63.2
MsaG008638	AT3G08720.1	37.662	77	42	1	1	71	215	291	4.05e-13	63.2
MsaG008638	AT3G08720.3	37.662	77	42	1	1	71	215	291	4.05e-13	63.2
MsaG008638	AT3G08720.4	37.662	77	42	1	1	71	215	291	4.05e-13	63.2
MsaG008638	AT3G08720.2	37.662	77	42	1	1	71	215	291	4.05e-13	63.2
MsaG008638	AT5G57630.2	41.176	68	35	1	1	63	87	154	4.19e-13	62.8
MsaG008638	AT5G57630.1	41.176	68	35	1	1	63	87	154	4.31e-13	62.8
MsaG008638	AT3G45780.2	49.206	63	24	1	8	62	745	807	4.42e-13	62.8
MsaG008638	AT3G45780.1	49.206	63	24	1	8	62	745	807	4.42e-13	62.8
MsaG008638	AT1G48260.1	43.478	69	33	1	1	63	86	154	4.60e-13	62.8
MsaG008638	AT5G25110.1	43.939	66	32	1	3	63	120	185	4.66e-13	62.8
MsaG008638	AT2G45490.2	49.275	69	29	1	1	63	97	165	4.79e-13	62.0
MsaG008638	AT2G45490.1	49.275	69	29	1	1	63	97	165	4.96e-13	62.4
MsaG008638	AT1G48260.2	43.478	69	33	1	1	63	1	69	5.07e-13	62.8
MsaG008638	AT1G48260.4	43.478	69	33	1	1	63	1	69	5.07e-13	62.8
MsaG008638	AT1G48260.3	43.478	69	33	1	1	63	1	69	5.07e-13	62.8
MsaG008638	AT1G48260.5	43.478	69	33	1	1	63	1	69	5.07e-13	62.8
MsaG008638	AT5G57630.3	42.424	66	33	1	3	63	1	66	5.49e-13	62.4
MsaG008638	AT5G57565.4	39.706	68	36	1	1	63	34	101	5.52e-13	60.8
MsaG008638	AT2G19400.1	46.774	62	33	0	15	76	200	261	5.75e-13	62.4
MsaG008638	AT5G39440.1	39.744	78	41	1	1	72	94	171	6.01e-13	62.4
MsaG008638	AT2G46070.2	40.351	57	34	0	15	71	139	195	1.00e-12	61.6
MsaG008638	AT1G12680.1	38.202	89	44	4	1	80	176	262	1.20e-12	61.6
MsaG008638	AT2G46070.1	40.351	57	34	0	15	71	139	195	1.21e-12	61.6
MsaG008638	AT2G46070.3	40.351	57	34	0	15	71	173	229	1.26e-12	61.6
MsaG008638	AT4G13000.1	45.161	62	29	2	2	62	108	165	1.28e-12	61.6
MsaG008638	AT4G18700.1	39.706	68	36	1	1	63	101	168	1.34e-12	61.6
MsaG008638	AT5G58380.1	41.176	68	35	1	1	63	87	154	1.69e-12	61.2
MsaG008638	AT3G45240.3	41.860	86	43	2	1	80	191	275	1.96e-12	60.8
MsaG008638	AT5G45810.1	39.706	68	36	1	1	63	103	170	1.99e-12	60.8
MsaG008638	AT1G18350.1	42.857	63	36	0	9	71	131	193	2.02e-12	60.8
MsaG008638	AT3G20830.1	44.898	49	27	0	21	69	130	178	2.20e-12	60.8
MsaG008638	AT3G23000.1	40.580	69	35	1	1	63	101	169	2.42e-12	60.8
MsaG008638	AT1G73500.1	42.857	63	36	0	9	71	133	195	2.76e-12	60.5
MsaG008638	AT3G59790.1	38.333	60	37	0	14	73	157	216	3.25e-12	60.5
MsaG008638	AT5G47750.1	38.571	70	35	1	1	62	266	335	3.26e-12	60.5
MsaG008638	AT1G01560.4	42.105	57	33	0	15	71	138	194	3.62e-12	60.1
MsaG008638	AT1G01560.1	42.105	57	33	0	15	71	138	194	3.62e-12	60.1
MsaG008638	AT1G01560.3	42.105	57	33	0	15	71	138	194	3.65e-12	60.1
MsaG008638	AT1G29230.1	38.235	68	37	1	1	63	149	216	4.01e-12	60.1
MsaG008638	AT1G01560.2	42.105	57	33	0	15	71	138	194	4.16e-12	60.1
MsaG008638	AT5G60550.1	37.500	88	47	2	1	80	190	277	4.99e-12	59.7
MsaG008638	AT2G38490.1	39.706	68	36	1	1	63	103	170	6.62e-12	59.7
MsaG008638	AT4G14580.1	39.130	69	36	1	1	63	97	165	7.58e-12	59.3
MsaG008638	AT1G07880.1	38.983	59	36	0	15	73	131	189	8.56e-12	58.5
MsaG008638	AT4G01370.1	40.351	57	34	0	15	71	141	197	1.05e-11	58.9
MsaG008638	AT3G45240.2	38.636	88	46	2	1	80	191	278	1.19e-11	58.9
MsaG008638	AT3G45240.1	38.636	88	46	2	1	80	191	278	1.19e-11	58.9
MsaG008638	AT3G25250.1	41.935	62	31	2	2	62	111	168	1.20e-11	58.9
MsaG008638	AT1G07880.2	38.983	59	36	0	15	73	131	189	1.23e-11	58.9
MsaG008638	AT1G51170.1	50.000	42	21	0	21	62	131	172	1.94e-11	58.2
MsaG008638	AT5G18700.1	40.789	76	39	2	1	70	73	148	2.23e-11	58.2
MsaG008638	AT5G23580.1	43.056	72	32	2	1	63	98	169	2.71e-11	57.8
MsaG008638	AT2G34180.1	38.235	68	37	1	1	63	132	199	2.87e-11	57.8
MsaG008638	AT4G11330.1	41.818	55	32	0	18	72	144	198	2.89e-11	57.8
MsaG008638	AT5G58950.1	56.098	41	18	0	23	63	315	355	4.34e-11	57.4
MsaG008638	AT1G61950.1	45.205	73	30	3	1	63	174	246	7.24e-11	56.6
MsaG008638	AT2G42880.2	36.923	65	40	1	13	76	121	185	7.74e-11	56.6
MsaG008638	AT2G42880.1	36.923	65	40	1	13	76	121	185	8.18e-11	56.6
MsaG008638	AT3G10660.2	44.444	72	31	2	1	63	262	333	9.98e-11	56.2
MsaG008638	AT3G10660.1	44.444	72	31	2	1	63	262	333	9.98e-11	56.2

Find 10 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATATTAAAATAGCTGATTT+TGG	0.157219	2:-40149250	MsaT008638.1:CDS
CATTTGGAAGGACAGTAATT+TGG	0.268994	2:+40149203	None:intergenic
TCTTGAATACATACATAGTT+TGG	0.294404	2:-40149402	MsaT008638.1:CDS
CGAGAAACTCATGGTGCATT+TGG	0.315782	2:+40149187	None:intergenic
AGTGATACATCGTGATATTA+AGG	0.343328	2:-40149378	MsaT008638.1:intron
CTTGAATACATACATAGTTT+GGG	0.409234	2:-40149401	MsaT008638.1:CDS
CTTGTAAGTAACAAGTTCTC+TGG	0.461152	2:+40149280	None:intergenic
AACTTGTTACTTACAAGTGA+AGG	0.553308	2:-40149274	MsaT008638.1:CDS
AAACTCATGGTGCATTTGGA+AGG	0.562854	2:+40149191	None:intergenic
ATGGCACTTGAATCATGTGA+AGG	0.708525	2:-40150198	MsaT008638.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	40149195	40150220	40149195	ID=MsaG008638
Chr2	mRNA	40149195	40150220	40149195	ID=MsaT008638.1;Parent=MsaG008638
Chr2	exon	40149195	40149302	40149195	ID=MsaT008638.1.exon3;Parent=MsaT008638.1
Chr2	CDS	40149195	40149302	40149195	ID=cds.MsaT008638.1;Parent=MsaT008638.1
Chr2	exon	40149379	40149462	40149379	ID=MsaT008638.1.exon2;Parent=MsaT008638.1
Chr2	CDS	40149379	40149462	40149379	ID=cds.MsaT008638.1;Parent=MsaT008638.1
Chr2	exon	40150170	40150220	40150170	ID=MsaT008638.1.exon1;Parent=MsaT008638.1
Chr2	CDS	40150170	40150220	40150170	ID=cds.MsaT008638.1;Parent=MsaT008638.1

Gene Sequence	>MsaT008638.1 ATGGCACTTGAATCATGTGAAGGTGAAGAGCTTTTTGATCAAATTACCAGGGATGAGGCACGATTTTATGCAGCTGAAGTTGTCGATGCTCTTGAATACATACATAGTTTGGGAGTGATACATCGTGATATTAAGCCAGAGAACTTGTTACTTACAAGTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGACTATGCAAGATAGCCAAATTACTGTCCTTCCAAATGCACCATGA
Protein sequence	>MsaT008638.1 MALESCEGEELFDQITRDEARFYAAEVVDALEYIHSLGVIHRDIKPENLLLTSEGHIKIADFGSVKTMQDSQITVLPNAP*