AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG009115


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG009115 MtrunA17_Chr2g0309421 97.548 571 8 2 5 569 1 571 0.0 1148
MsaG009115 MtrunA17_Chr8g0356291 62.655 565 164 11 10 569 2 524 0.0 676
MsaG009115 MtrunA17_Chr2g0290691 62.528 451 155 8 129 569 158 604 0.0 562
MsaG009115 MtrunA17_Chr8g0335351 68.146 383 107 5 149 523 345 720 0.0 536
MsaG009115 MtrunA17_Chr7g0250631 59.488 469 145 10 135 569 304 761 0.0 535
MsaG009115 MtrunA17_Chr7g0227331 48.993 596 251 11 9 569 41 618 1.20e-179 520
MsaG009115 MtrunA17_Chr6g0449401 53.388 487 162 8 125 569 216 679 6.94e-171 500
MsaG009115 MtrunA17_Chr1g0179101 57.377 427 164 6 149 569 445 859 5.66e-164 488
MsaG009115 MtrunA17_Chr7g0266031 60.660 394 148 5 139 529 459 848 1.72e-163 488
MsaG009115 MtrunA17_Chr3g0080101 59.314 408 154 5 141 538 382 787 1.43e-159 475
MsaG009115 MtrunA17_Chr4g0063311 49.250 400 177 7 146 524 63 457 1.47e-130 390
MsaG009115 MtrunA17_Chr2g0321101 52.011 373 161 4 155 516 68 433 2.33e-123 371
MsaG009115 MtrunA17_Chr8g0381091 48.346 393 173 6 145 524 48 423 4.87e-119 359
MsaG009115 MtrunA17_Chr2g0285711 45.701 442 191 9 110 524 6 425 8.05e-118 356
MsaG009115 MtrunA17_Chr2g0312641 44.059 404 181 9 130 523 51 419 2.84e-110 338
MsaG009115 MtrunA17_Chr4g0030361 46.809 376 151 5 149 523 282 609 2.03e-109 341
MsaG009115 MtrunA17_Chr2g0327561 44.987 389 176 4 149 536 601 952 4.71e-105 338
MsaG009115 MtrunA17_Chr8g0369091 43.890 401 174 6 149 548 572 922 4.67e-104 334
MsaG009115 MtrunA17_Chr8g0338741 39.370 381 195 11 162 528 7 365 7.98e-78 252
MsaG009115 MtrunA17_Chr4g0032761 37.343 399 183 11 170 530 10 379 1.10e-72 238
MsaG009115 MtrunA17_Chr2g0329011 37.143 385 185 9 170 535 12 358 7.08e-71 232
MsaG009115 MtrunA17_Chr7g0234641 37.534 365 198 9 170 524 8 352 2.80e-68 227
MsaG009115 MtrunA17_Chr5g0428981 35.079 382 201 6 146 526 735 1070 1.00e-59 214
MsaG009115 MtrunA17_Chr4g0018201 34.817 382 202 6 146 526 731 1066 1.56e-59 214
MsaG009115 MtrunA17_Chr6g0478601 35.405 370 189 10 171 535 107 431 1.44e-58 204
MsaG009115 MtrunA17_Chr7g0261491 32.905 389 208 12 163 538 108 456 5.34e-55 195
MsaG009115 MtrunA17_Chr1g0183651 31.250 416 234 11 163 568 108 481 5.70e-54 192
MsaG009115 MtrunA17_Chr1g0167351 32.877 365 206 8 175 534 110 440 4.58e-53 189
MsaG009115 MtrunA17_Chr1g0187581 31.592 402 228 10 175 568 117 479 5.65e-53 189
MsaG009115 MtrunA17_Chr1g0153321 31.325 415 236 13 163 568 96 470 4.65e-52 186
MsaG009115 MtrunA17_Chr1g0167311 30.348 402 233 9 175 568 115 477 3.23e-50 181
MsaG009115 MtrunA17_Chr2g0299781 31.961 413 245 10 163 568 101 484 4.62e-50 181
MsaG009115 MtrunA17_Chr3g0135951 30.216 417 247 11 163 568 82 465 5.68e-49 177
MsaG009115 MtrunA17_Chr4g0059751 39.053 169 87 4 163 322 80 241 2.84e-29 120
MsaG009115 MtrunA17_Chr4g0059751 38.393 112 66 2 403 513 249 358 7.35e-20 92.4
MsaG009115 MtrunA17_Chr7g0245031 40.523 153 89 1 170 322 143 293 8.47e-29 119
MsaG009115 MtrunA17_Chr7g0245031 34.536 194 102 7 381 568 288 462 3.07e-21 97.1
MsaG009115 MtrunA17_Chr1g0197721 40.268 149 87 1 171 319 47 193 3.01e-27 115
MsaG009115 MtrunA17_Chr1g0197721 34.247 146 91 3 381 523 191 334 9.12e-14 73.9
MsaG009115 MtrunA17_Chr3g0125381 35.252 139 78 2 370 508 81 207 1.16e-20 90.9
MsaG009115 MtrunA17_Chr3g0125381 33.913 115 66 2 225 331 2 114 9.83e-12 64.7
MsaG009115 MtrunA17_Chr2g0286501 37.255 153 88 3 172 324 46 190 2.19e-20 95.9
MsaG009115 MtrunA17_Chr4g0008561 25.826 333 164 11 179 507 23 276 1.97e-19 92.4
MsaG009115 MtrunA17_Chr3g0140631 34.545 165 101 2 172 331 34 196 2.21e-19 89.0
MsaG009115 MtrunA17_Chr3g0140631 31.429 105 68 1 403 507 188 288 5.40e-14 73.2
MsaG009115 MtrunA17_Chr8g0351491 25.749 334 167 8 175 508 16 268 4.73e-19 87.8
MsaG009115 MtrunA17_Chr2g0284031 34.641 153 97 1 170 322 26 175 4.20e-18 87.4
MsaG009115 MtrunA17_Chr8g0379091 33.333 162 104 2 162 322 12 170 1.04e-17 86.3
MsaG009115 MtrunA17_Chr4g0013131 31.210 157 105 1 166 322 3 156 6.36e-17 83.6
MsaG009115 MtrunA17_Chr1g0205421 32.692 156 102 1 166 321 3 155 6.56e-17 83.6
MsaG009115 MtrunA17_Chr1g0190831 30.921 152 103 2 172 322 1 151 1.73e-16 82.8
MsaG009115 MtrunA17_Chr4g0025671 28.947 152 106 2 172 322 5 155 3.09e-16 82.4
MsaG009115 MtrunA17_Chr2g0321841 28.289 152 107 2 172 322 1 151 4.51e-16 82.0
MsaG009115 MtrunA17_Chr3g0132591 34.054 185 110 4 145 326 80 255 4.58e-16 80.9
MsaG009115 MtrunA17_Chr3g0114511 30.769 156 101 2 168 322 25 174 9.21e-16 79.7
MsaG009115 MtrunA17_Chr2g0304111 30.435 161 106 4 164 322 12 168 2.10e-15 79.0
MsaG009115 MtrunA17_Chr1g0203881 32.237 152 97 3 175 322 41 190 3.00e-15 78.6
MsaG009115 MtrunA17_Chr8g0353621 37.255 102 60 1 406 507 164 261 3.32e-15 76.3
MsaG009115 MtrunA17_Chr8g0353621 32.099 162 103 2 175 331 10 169 1.15e-14 74.7
MsaG009115 MtrunA17_Chr3g0107011 29.139 151 104 1 172 322 11 158 3.69e-15 78.2
MsaG009115 MtrunA17_Chr7g0260191 29.605 152 105 2 172 322 1 151 5.44e-15 78.2
MsaG009115 MtrunA17_Chr6g0486661 30.921 152 97 4 403 549 912 1060 6.70e-15 78.2
MsaG009115 MtrunA17_Chr2g0284011 31.210 157 101 3 168 322 5 156 7.28e-15 77.0
MsaG009115 MtrunA17_Chr1g0185221 29.870 154 102 3 172 322 1 151 8.00e-15 77.4
MsaG009115 MtrunA17_Chr4g0074111 29.730 148 101 1 175 322 18 162 8.51e-15 76.6
MsaG009115 MtrunA17_Chr1g0173921 26.974 152 109 2 172 322 1 151 9.67e-15 77.8
MsaG009115 MtrunA17_Chr2g0302431 32.258 155 99 3 170 322 15 165 1.22e-14 76.6
MsaG009115 MtrunA17_Chr1g0188031 31.013 158 101 4 169 322 14 167 1.59e-14 75.9
MsaG009115 MtrunA17_Chr7g0244521 29.651 172 111 2 168 339 5 166 2.43e-14 75.5
MsaG009115 MtrunA17_Chr5g0428031 28.378 148 104 1 175 322 9 154 2.63e-14 75.5
MsaG009115 MtrunA17_Chr4g0001331 30.120 166 111 2 159 322 2 164 3.99e-14 74.7
MsaG009115 MtrunA17_Chr4g0001331 36.719 128 68 5 381 507 159 274 3.40e-12 68.9
MsaG009115 MtrunA17_Chr5g0432471 28.477 151 105 2 172 322 9 156 6.42e-14 74.3
MsaG009115 MtrunA17_Chr3g0107051 31.081 148 99 1 175 322 21 165 6.72e-14 73.9
MsaG009115 MtrunA17_Chr4g0047191 31.624 117 80 0 222 338 94 210 7.34e-14 73.2
MsaG009115 MtrunA17_Chr1g0190131 30.405 148 99 2 173 319 7 151 7.73e-14 72.0
MsaG009115 MtrunA17_Chr8g0346071 30.667 150 98 4 175 322 17 162 8.34e-14 73.6
MsaG009115 MtrunA17_Chr4g0047211 31.624 117 80 0 222 338 89 205 8.86e-14 73.2
MsaG009115 MtrunA17_Chr3g0133541 33.333 153 95 3 174 322 306 455 9.02e-14 74.3
MsaG009115 MtrunA17_Chr1g0188991 30.625 160 107 3 164 322 4 160 1.13e-13 73.9
MsaG009115 MtrunA17_Chr7g0258051 25.974 154 112 2 172 324 13 165 1.15e-13 73.9
MsaG009115 MtrunA17_Chr5g0419441 27.922 154 108 2 173 326 237 387 1.18e-13 74.3
MsaG009115 MtrunA17_Chr1g0202831 31.098 164 101 4 179 335 415 573 1.41e-13 73.9
MsaG009115 MtrunA17_Chr8g0346081 29.333 150 100 3 175 322 17 162 1.53e-13 72.8
MsaG009115 MtrunA17_Chr6g0468751 29.801 151 104 1 172 322 16 164 2.00e-13 72.8
MsaG009115 MtrunA17_Chr5g0432491 32.886 149 96 2 175 322 23 168 2.77e-13 72.0
MsaG009115 MtrunA17_Chr6g0453681 29.801 151 104 1 172 322 16 164 2.96e-13 72.4
MsaG009115 MtrunA17_Chr6g0453681 35.507 138 76 6 409 544 178 304 7.41e-11 64.7
MsaG009115 MtrunA17_Chr4g0000431 31.847 157 99 4 169 322 18 169 4.08e-13 72.4
MsaG009115 MtrunA17_Chr1g0200601 31.818 154 99 4 174 323 29 180 4.20e-13 72.0
MsaG009115 MtrunA17_Chr3g0091311 30.323 155 105 1 168 322 5 156 4.52e-13 69.7
MsaG009115 MtrunA17_Chr2g0317001 29.221 154 105 2 173 326 13 162 5.18e-13 72.0
MsaG009115 MtrunA17_Chr8g0385341 30.065 153 101 3 175 323 30 180 8.13e-13 70.9
MsaG009115 MtrunA17_Chr1g0170551 28.750 160 110 2 175 334 7 162 1.20e-12 71.2
MsaG009115 MtrunA17_Chr1g0170551 32.075 106 66 2 406 511 162 261 6.68e-12 68.9
MsaG009115 MtrunA17_Chr7g0272841 30.000 170 112 3 175 339 68 235 1.24e-12 70.9
MsaG009115 MtrunA17_Chr5g0441011 30.822 146 95 3 179 322 17 158 1.29e-12 70.1
MsaG009115 MtrunA17_Chr1g0150321 32.432 148 97 1 175 322 13 157 1.42e-12 69.7
MsaG009115 MtrunA17_Chr4g0063881 28.472 144 101 1 179 322 15 156 1.46e-12 70.1
MsaG009115 MtrunA17_Chr1g0166101 32.468 154 97 4 172 322 21 170 1.47e-12 69.7
MsaG009115 MtrunA17_Chr8g0345801 32.824 131 81 3 180 308 20 145 1.82e-12 67.8
MsaG009115 MtrunA17_Chr6g0450571 31.056 161 107 3 163 322 4 161 1.86e-12 70.1
MsaG009115 MtrunA17_Chr8g0388891 26.282 156 110 3 170 322 128 281 2.12e-12 68.9
MsaG009115 MtrunA17_Chr5g0405421 29.605 152 103 2 175 322 99 250 2.19e-12 69.7
MsaG009115 MtrunA17_Chr8g0386981 31.944 144 94 2 181 322 414 555 2.27e-12 70.1
MsaG009115 MtrunA17_Chr2g0276831 24.928 345 173 13 179 507 14 288 2.44e-12 68.9
MsaG009115 MtrunA17_Chr2g0330211 30.303 165 111 3 160 322 2 164 3.00e-12 69.3
MsaG009115 MtrunA17_Chr7g0267751 29.891 184 117 7 147 323 107 285 3.08e-12 69.3
MsaG009115 MtrunA17_Chr7g0256001 32.500 160 96 5 172 322 138 294 3.54e-12 69.3
MsaG009115 MtrunA17_Chr2g0326531 30.723 166 103 5 166 322 110 272 3.58e-12 68.6
MsaG009115 MtrunA17_Chr3g0131061 30.573 157 90 5 403 544 155 307 3.62e-12 68.2
MsaG009115 MtrunA17_Chr5g0441691 30.719 153 100 4 175 323 68 218 4.22e-12 68.6
MsaG009115 MtrunA17_Chr3g0130151 30.822 146 97 2 179 322 248 391 4.33e-12 68.9
MsaG009115 MtrunA17_Chr5g0426521 35.514 107 60 3 406 507 158 260 5.77e-12 67.4
MsaG009115 MtrunA17_Chr1g0176421 29.412 153 102 3 175 323 161 311 6.24e-12 68.6
MsaG009115 MtrunA17_Chr1g0173541 30.769 156 102 3 172 323 49 202 7.93e-12 67.8
MsaG009115 MtrunA17_Chr8g0384301 29.560 159 108 2 166 322 290 446 1.01e-11 67.8
MsaG009115 MtrunA17_Chr4g0029241 30.968 155 95 4 180 325 122 273 1.04e-11 67.0
MsaG009115 MtrunA17_Chr1g0157131 30.128 156 97 6 175 323 74 224 1.05e-11 67.4
MsaG009115 MtrunA17_Chr5g0448721 29.050 179 108 4 162 323 70 246 1.17e-11 67.4
MsaG009115 MtrunA17_Chr5g0402601 32.967 182 102 7 179 343 376 554 1.28e-11 67.4
MsaG009115 MtrunA17_Chr3g0127571 33.758 157 92 6 175 322 138 291 1.28e-11 67.4
MsaG009115 MtrunA17_Chr8g0385281 29.299 157 92 5 403 544 156 308 1.91e-11 65.9
MsaG009115 MtrunA17_Chr2g0277501 34.545 110 63 3 403 507 155 260 1.99e-11 65.9
MsaG009115 MtrunA17_Chr7g0274941 38.835 103 56 3 408 507 176 274 2.28e-11 65.1
MsaG009115 MtrunA17_Chr1g0170281 28.662 157 108 3 175 329 118 272 2.73e-11 66.2
MsaG009115 MtrunA17_Chr5g0399911 34.579 107 61 3 406 507 173 275 3.07e-11 65.1
MsaG009115 MtrunA17_Chr3g0090261 25.000 156 112 3 170 322 77 230 3.16e-11 65.1
MsaG009115 MtrunA17_Chr1g0162301 35.514 107 60 3 406 507 178 280 3.17e-11 65.1
MsaG009115 MtrunA17_Chr4g0059951 27.803 223 143 7 117 323 3 223 3.66e-11 65.9
MsaG009115 MtrunA17_Chr4g0072831 33.117 154 80 5 169 322 4 134 3.99e-11 64.7
MsaG009115 MtrunA17_Chr4g0075541 35.294 119 68 5 214 325 125 241 4.10e-11 65.1
MsaG009115 MtrunA17_Chr4g0033371 28.788 198 125 6 116 310 22 206 4.11e-11 65.5
MsaG009115 MtrunA17_Chr4g0047201 26.496 117 86 0 222 338 250 366 4.49e-11 65.5
MsaG009115 MtrunA17_Chr7g0257751 30.323 155 102 3 173 323 56 208 4.55e-11 65.5
MsaG009115 MtrunA17_Chr1g0176751 32.174 115 65 4 408 520 286 389 4.73e-11 65.5
MsaG009115 MtrunA17_Chr5g0444171 30.128 156 97 6 175 323 92 242 5.39e-11 65.1
MsaG009115 MtrunA17_Chr5g0402551 34.228 149 90 5 181 322 140 287 5.72e-11 65.5
MsaG009115 MtrunA17_Chr8g0387671 29.412 153 102 3 175 323 66 216 5.79e-11 65.1
MsaG009115 MtrunA17_Chr7g0218071 30.769 156 103 4 169 322 114 266 6.36e-11 65.5
MsaG009115 MtrunA17_Chr2g0282321 28.455 123 86 1 218 338 205 327 6.74e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG009115 AT1G79250.1 72.160 449 104 9 139 569 110 555 0.0 647
MsaG009115 AT1G79250.3 72.160 449 104 9 139 569 110 555 0.0 647
MsaG009115 AT1G79250.2 72.160 449 104 9 139 569 110 555 0.0 647
MsaG009115 AT1G79250.4 72.160 449 104 9 139 569 110 555 0.0 647
MsaG009115 AT3G12690.1 71.395 430 106 5 148 569 157 577 0.0 626
MsaG009115 AT3G12690.3 71.395 430 106 5 148 569 157 577 0.0 626
MsaG009115 AT3G12690.2 71.395 430 106 5 148 569 157 577 0.0 626
MsaG009115 AT1G16440.1 70.023 427 109 8 149 569 86 499 0.0 606
MsaG009115 AT5G55910.2 59.283 474 163 7 113 569 38 498 0.0 546
MsaG009115 AT5G55910.1 59.283 474 163 7 113 569 38 498 0.0 546
MsaG009115 AT5G47750.1 63.488 430 141 8 149 569 164 586 0.0 545
MsaG009115 AT4G26610.1 60.217 460 161 7 91 529 20 478 0.0 545
MsaG009115 AT2G44830.2 57.234 470 171 7 119 569 307 765 5.12e-180 527
MsaG009115 AT2G44830.3 57.234 470 171 7 119 569 307 765 5.12e-180 527
MsaG009115 AT2G44830.1 57.234 470 171 7 119 569 307 765 5.12e-180 527
MsaG009115 AT5G40030.1 61.412 425 149 7 149 569 86 499 3.41e-178 513
MsaG009115 AT3G27580.2 62.953 386 134 5 149 527 153 536 5.38e-169 492
MsaG009115 AT3G27580.1 62.953 386 134 5 149 527 153 536 5.38e-169 492
MsaG009115 AT5G03640.2 47.874 541 233 12 11 529 387 900 1.54e-156 472
MsaG009115 AT5G03640.1 47.874 541 233 12 11 529 387 900 1.54e-156 472
MsaG009115 AT3G52890.2 54.084 453 187 8 131 569 489 934 4.64e-155 468
MsaG009115 AT3G52890.4 54.084 453 187 8 131 569 489 934 4.64e-155 468
MsaG009115 AT3G52890.1 54.084 453 187 8 131 569 489 934 4.64e-155 468
MsaG009115 AT3G52890.3 54.084 453 187 8 131 569 489 934 4.64e-155 468
MsaG009115 AT2G36350.1 57.732 388 156 3 149 528 532 919 1.31e-153 465
MsaG009115 AT2G26700.1 46.189 433 167 8 149 524 59 482 4.45e-126 380
MsaG009115 AT2G34650.1 50.643 389 162 8 147 527 48 414 1.68e-125 376
MsaG009115 AT3G44610.1 53.315 362 137 6 175 515 71 421 1.55e-124 374
MsaG009115 AT5G58140.6 46.113 373 155 5 150 521 551 878 1.48e-106 341
MsaG009115 AT5G58140.7 46.113 373 155 5 150 521 551 878 1.48e-106 341
MsaG009115 AT5G58140.5 46.113 373 155 5 150 521 551 878 1.48e-106 341
MsaG009115 AT5G58140.2 46.113 373 155 5 150 521 551 878 1.48e-106 341
MsaG009115 AT5G58140.1 46.113 373 155 5 150 521 551 878 1.48e-106 341
MsaG009115 AT5G58140.3 45.822 371 155 5 150 519 551 876 7.61e-105 336
MsaG009115 AT3G14370.1 44.032 377 178 6 151 521 61 410 1.35e-101 316
MsaG009115 AT1G53700.1 43.846 390 179 6 151 531 66 424 2.14e-99 310
MsaG009115 AT3G45780.2 44.279 402 177 6 149 549 636 991 4.56e-99 323
MsaG009115 AT3G45780.1 44.279 402 177 6 149 549 636 991 4.56e-99 323
MsaG009115 AT1G51170.1 40.164 366 184 11 170 524 17 358 6.01e-73 239
MsaG009115 AT4G13000.1 37.808 365 178 8 170 524 15 340 1.39e-70 231
MsaG009115 AT3G25250.1 36.986 365 191 9 170 524 12 347 1.63e-67 225
MsaG009115 AT3G20830.1 37.940 369 190 11 170 524 16 359 3.48e-67 224
MsaG009115 AT1G45160.2 38.315 368 172 12 170 532 665 982 3.87e-59 213
MsaG009115 AT1G45160.1 38.315 368 172 12 170 532 665 982 7.74e-59 212
MsaG009115 AT3G17850.1 36.559 372 182 10 171 535 878 1202 2.92e-57 208
MsaG009115 AT1G48490.4 35.833 360 176 8 170 526 824 1131 3.25e-56 205
MsaG009115 AT1G48490.3 35.833 360 176 8 170 526 823 1130 3.60e-56 205
MsaG009115 AT1G48490.2 35.833 360 176 8 170 526 823 1130 3.60e-56 205
MsaG009115 AT1G48490.1 35.833 360 176 8 170 526 823 1130 3.60e-56 205
MsaG009115 AT5G62310.1 35.475 358 184 8 171 526 750 1062 6.95e-56 204
MsaG009115 AT3G23310.1 32.212 416 233 12 163 568 108 484 2.23e-54 194
MsaG009115 AT4G14350.3 32.090 402 226 11 175 568 119 481 7.15e-54 192
MsaG009115 AT4G14350.2 32.090 402 226 11 175 568 119 481 7.47e-54 192
MsaG009115 AT4G14350.1 32.090 402 226 11 175 568 119 481 7.47e-54 192
MsaG009115 AT4G14350.4 32.090 402 226 11 175 568 119 481 7.47e-54 192
MsaG009115 AT5G09890.2 30.332 422 234 12 163 568 90 467 4.54e-53 189
MsaG009115 AT5G09890.1 30.332 422 234 12 163 568 90 467 4.69e-53 189
MsaG009115 AT1G30640.3 31.250 384 224 9 163 539 15 365 2.20e-51 183
MsaG009115 AT1G30640.2 31.579 380 217 9 163 532 108 454 3.74e-51 185
MsaG009115 AT1G30640.1 31.579 380 217 9 163 532 108 454 3.74e-51 185
MsaG009115 AT2G20470.3 31.010 416 234 12 163 568 112 484 4.50e-50 181
MsaG009115 AT2G20470.2 31.010 416 234 12 163 568 112 484 1.34e-49 181
MsaG009115 AT2G20470.1 31.010 416 234 12 163 568 112 484 1.34e-49 181
MsaG009115 AT4G33080.2 29.017 417 253 10 163 568 82 466 6.56e-49 177
MsaG009115 AT4G33080.1 29.017 417 253 10 163 568 82 466 9.38e-49 177
MsaG009115 AT1G03920.2 32.065 368 203 10 175 534 24 352 9.37e-47 170
MsaG009115 AT1G03920.1 32.065 368 203 10 175 534 137 465 1.31e-46 172
MsaG009115 AT1G03920.3 32.065 368 203 10 175 534 137 465 1.31e-46 172
MsaG009115 AT2G19400.1 30.971 381 226 9 170 540 100 453 1.42e-46 171
MsaG009115 AT5G58140.4 48.855 131 66 1 150 279 551 681 7.03e-34 137
MsaG009115 AT3G08720.1 39.744 156 92 1 167 322 132 285 4.09e-29 120
MsaG009115 AT3G08720.1 45.133 113 58 3 401 512 291 400 3.54e-23 103
MsaG009115 AT3G08720.3 39.744 156 92 1 167 322 132 285 4.09e-29 120
MsaG009115 AT3G08720.3 45.133 113 58 3 401 512 291 400 3.54e-23 103
MsaG009115 AT3G08720.4 39.744 156 92 1 167 322 132 285 4.09e-29 120
MsaG009115 AT3G08720.4 45.133 113 58 3 401 512 291 400 3.54e-23 103
MsaG009115 AT3G08720.2 39.744 156 92 1 167 322 132 285 4.09e-29 120
MsaG009115 AT3G08720.2 45.133 113 58 3 401 512 291 400 3.54e-23 103
MsaG009115 AT3G08730.1 37.888 161 98 1 162 322 121 279 2.22e-28 119
MsaG009115 AT3G08730.1 42.636 129 68 4 401 526 285 410 4.15e-24 105
MsaG009115 AT3G08730.2 37.888 161 98 1 162 322 121 279 2.22e-28 119
MsaG009115 AT3G08730.2 42.636 129 68 4 401 526 285 410 4.15e-24 105
MsaG009115 AT5G04510.2 37.931 145 88 1 175 319 44 186 6.55e-25 107
MsaG009115 AT5G04510.2 34.899 149 91 4 381 525 184 330 1.90e-19 91.3
MsaG009115 AT5G04510.1 37.931 145 88 1 175 319 44 186 9.96e-25 108
MsaG009115 AT5G04510.1 34.899 149 91 4 381 525 184 330 2.34e-19 91.7
MsaG009115 AT5G04510.3 37.241 145 89 1 175 319 44 186 1.70e-24 104
MsaG009115 AT3G10540.1 37.086 151 91 2 171 319 39 187 5.17e-24 105
MsaG009115 AT3G10540.1 32.515 163 104 4 381 539 185 345 3.98e-19 90.9
MsaG009115 AT5G18700.1 39.735 151 83 3 172 322 1 143 6.15e-24 107
MsaG009115 AT2G45490.1 32.663 199 116 5 337 529 102 288 1.24e-19 90.1
MsaG009115 AT2G45490.1 31.325 166 107 2 171 331 18 181 4.54e-17 82.4
MsaG009115 AT2G25880.1 35.802 162 97 2 175 331 25 184 1.52e-19 89.7
MsaG009115 AT2G25880.1 35.238 105 64 1 403 507 176 276 3.25e-15 77.0
MsaG009115 AT2G25880.4 35.802 162 97 2 175 331 38 197 3.34e-19 89.0
MsaG009115 AT2G25880.4 35.238 105 64 1 403 507 189 289 3.84e-15 77.0
MsaG009115 AT5G57630.2 35.032 157 95 3 168 322 5 156 6.65e-19 89.7
MsaG009115 AT5G57630.1 35.032 157 95 3 168 322 5 156 7.54e-19 89.7
MsaG009115 AT2G25880.3 35.802 162 97 2 175 331 86 245 9.63e-19 88.6
MsaG009115 AT2G25880.3 35.238 105 64 1 403 507 237 337 8.92e-15 76.3
MsaG009115 AT4G32830.1 34.940 166 101 2 171 331 27 190 1.07e-18 87.4
MsaG009115 AT4G32830.1 35.238 105 64 1 403 507 182 282 8.98e-15 75.5
MsaG009115 AT4G18700.1 33.987 153 98 1 170 322 21 170 5.07e-18 87.8
MsaG009115 AT1G12680.1 33.766 154 92 3 179 331 111 255 1.32e-17 86.3
MsaG009115 AT5G45810.1 32.278 158 104 1 165 322 18 172 2.33e-17 85.5
MsaG009115 AT4G24400.1 30.247 162 111 1 175 336 9 168 3.42e-17 84.7
MsaG009115 AT2G20050.1 37.931 116 66 4 403 515 934 1046 3.84e-17 85.9
MsaG009115 AT2G20050.2 37.931 116 66 4 403 515 931 1043 3.87e-17 85.9
MsaG009115 AT2G45490.2 31.325 166 107 2 171 331 18 181 4.27e-17 81.6
MsaG009115 AT2G45490.2 33.117 154 96 3 337 484 102 254 7.07e-13 69.3
MsaG009115 AT4G24400.2 30.435 161 110 1 175 335 9 167 4.44e-17 84.3
MsaG009115 AT1G29230.1 33.108 148 96 1 175 322 74 218 1.26e-16 83.6
MsaG009115 AT3G04810.2 31.579 152 102 2 172 322 1 151 1.38e-16 83.6
MsaG009115 AT3G04810.1 31.579 152 102 2 172 322 1 151 1.38e-16 83.6
MsaG009115 AT3G04810.3 31.579 152 102 2 172 322 1 151 1.38e-16 83.6
MsaG009115 AT4G09570.1 33.117 154 97 3 174 323 24 175 1.98e-16 82.8
MsaG009115 AT1G54510.4 31.579 152 102 2 172 322 1 151 2.54e-16 82.8
MsaG009115 AT1G54510.2 31.579 152 102 2 172 322 1 151 2.54e-16 82.8
MsaG009115 AT1G54510.1 31.579 152 102 2 172 322 1 151 2.54e-16 82.8
MsaG009115 AT1G54510.3 31.579 152 102 2 172 322 1 151 2.54e-16 82.8
MsaG009115 AT5G01810.1 32.704 159 100 3 166 322 3 156 2.71e-16 81.6
MsaG009115 AT5G01810.2 32.704 159 100 3 166 322 3 156 2.71e-16 81.6
MsaG009115 AT5G28290.3 31.579 152 102 2 172 322 1 151 2.81e-16 82.4
MsaG009115 AT5G28290.1 31.579 152 102 2 172 322 1 151 2.84e-16 82.4
MsaG009115 AT5G28290.2 31.579 152 102 2 172 322 1 151 2.84e-16 82.4
MsaG009115 AT5G01810.3 32.704 159 100 3 166 322 3 156 2.92e-16 81.3
MsaG009115 AT3G44200.2 28.947 152 106 2 172 322 5 155 3.64e-16 82.8
MsaG009115 AT3G44200.1 28.947 152 106 2 172 322 5 155 3.64e-16 82.8
MsaG009115 AT5G45820.1 31.847 157 104 1 166 322 3 156 8.32e-16 80.5
MsaG009115 AT1G35670.1 33.117 154 97 3 174 323 25 176 1.33e-15 80.1
MsaG009115 AT2G25090.1 34.722 144 89 3 181 322 21 161 1.66e-15 79.7
MsaG009115 AT2G25880.2 35.238 105 64 1 403 507 144 244 1.91e-15 77.0
MsaG009115 AT2G34180.1 29.936 157 107 1 167 323 49 202 2.78e-15 79.0
MsaG009115 AT3G01090.2 30.539 167 113 2 157 322 23 187 3.22e-15 79.0
MsaG009115 AT3G01090.2 33.529 170 90 9 370 537 172 320 2.73e-11 66.6
MsaG009115 AT5G25110.1 31.126 151 101 1 172 322 40 187 3.85e-15 78.6
MsaG009115 AT3G01090.3 31.126 151 102 1 172 322 16 164 4.74e-15 78.6
MsaG009115 AT3G01090.3 33.529 170 90 9 370 537 149 297 2.57e-11 66.6
MsaG009115 AT3G01090.1 31.126 151 102 1 172 322 16 164 4.74e-15 78.6
MsaG009115 AT3G01090.1 33.529 170 90 9 370 537 149 297 2.57e-11 66.6
MsaG009115 AT5G21326.1 32.258 155 89 4 175 322 13 158 1.20e-14 76.6
MsaG009115 AT3G63280.2 30.263 152 104 2 172 322 1 151 1.25e-14 77.4
MsaG009115 AT3G63280.3 30.263 152 104 2 172 322 1 151 1.25e-14 77.4
MsaG009115 AT3G63280.1 30.263 152 104 2 172 322 1 151 1.25e-14 77.4
MsaG009115 AT3G29160.3 32.026 153 98 3 172 322 17 165 1.26e-14 76.3
MsaG009115 AT3G17510.1 30.065 153 105 1 170 322 15 165 1.37e-14 76.6
MsaG009115 AT1G30270.1 31.333 150 97 4 175 322 31 176 1.57e-14 76.6
MsaG009115 AT3G29160.1 31.126 151 102 1 172 322 17 165 1.78e-14 76.6
MsaG009115 AT3G29160.2 31.126 151 102 1 172 322 17 165 1.78e-14 76.6
MsaG009115 AT2G26980.4 31.507 146 94 3 179 322 28 169 2.10e-14 76.3
MsaG009115 AT2G26980.3 30.667 150 98 3 175 322 14 159 2.12e-14 76.3
MsaG009115 AT2G26980.1 30.667 150 98 3 175 322 14 159 2.47e-14 75.5
MsaG009115 AT3G63280.4 30.065 153 105 2 171 322 54 205 2.50e-14 76.6
MsaG009115 AT2G30360.1 31.138 167 107 4 161 322 4 167 2.54e-14 75.9
MsaG009115 AT5G39440.1 31.126 151 102 1 172 322 16 164 2.58e-14 76.3
MsaG009115 AT5G39440.1 34.074 135 79 4 409 543 178 302 4.69e-11 65.9
MsaG009115 AT1G30270.2 31.333 150 97 4 175 322 31 176 2.70e-14 75.9
MsaG009115 AT3G20860.1 29.054 148 104 1 175 322 4 150 3.13e-14 75.5
MsaG009115 AT4G14580.1 32.704 159 100 3 167 322 13 167 3.23e-14 75.5
MsaG009115 AT2G26980.2 31.507 146 94 3 179 322 18 159 3.37e-14 73.6
MsaG009115 AT5G10930.1 33.775 151 92 5 175 322 12 157 3.99e-14 75.1
MsaG009115 AT5G10930.1 35.965 114 64 4 381 493 152 257 2.83e-11 66.2
MsaG009115 AT2G26980.5 31.507 146 94 3 179 322 18 159 5.35e-14 74.7
MsaG009115 AT1G73500.1 35.570 149 83 5 178 322 50 189 6.60e-14 73.2
MsaG009115 AT3G10660.2 32.680 153 97 4 175 323 186 336 6.88e-14 75.1
MsaG009115 AT3G10660.1 32.680 153 97 4 175 323 186 336 6.88e-14 75.1
MsaG009115 AT1G54960.1 29.885 174 107 3 175 339 68 235 7.96e-14 75.1
MsaG009115 AT1G54960.2 29.885 174 107 3 175 339 68 235 7.96e-14 75.1
MsaG009115 AT1G09000.1 30.409 171 110 4 175 339 69 236 1.61e-13 73.9
MsaG009115 AT1G09000.2 30.409 171 110 4 175 339 69 236 1.65e-13 73.9
MsaG009115 AT3G61960.1 35.115 131 78 3 180 308 15 140 1.80e-13 73.9
MsaG009115 AT3G61960.2 35.115 131 78 3 180 308 15 140 1.92e-13 73.6
MsaG009115 AT3G23000.1 31.707 164 101 4 164 322 14 171 2.68e-13 72.4
MsaG009115 AT4G24100.1 30.719 153 104 1 170 322 28 178 2.75e-13 73.2
MsaG009115 AT1G12580.1 29.630 162 104 4 169 322 34 193 3.26e-13 72.8
MsaG009115 AT4G24100.2 30.719 153 104 1 170 322 28 178 3.38e-13 73.2
MsaG009115 AT4G24100.4 30.719 153 104 1 170 322 44 194 3.71e-13 72.8
MsaG009115 AT3G45240.3 31.737 167 100 5 166 322 99 261 3.98e-13 71.6
MsaG009115 AT4G24100.3 30.719 153 104 1 170 322 44 194 4.49e-13 72.8
MsaG009115 AT3G45240.2 31.737 167 100 5 166 322 99 261 4.51e-13 71.6
MsaG009115 AT3G45240.1 31.737 167 100 5 166 322 99 261 4.51e-13 71.6
MsaG009115 AT2G35890.2 26.540 211 143 6 121 323 74 280 4.53e-13 72.4
MsaG009115 AT2G35890.1 26.540 211 143 6 121 323 74 280 4.53e-13 72.4
MsaG009115 AT1G50700.3 31.373 153 99 4 175 323 73 223 4.54e-13 72.0
MsaG009115 AT1G70430.3 30.189 159 109 1 164 322 5 161 4.90e-13 72.4
MsaG009115 AT1G70430.4 30.189 159 109 1 164 322 5 161 5.32e-13 72.4
MsaG009115 AT5G58380.1 29.114 158 108 2 166 322 2 156 5.44e-13 72.0
MsaG009115 AT1G70430.1 30.189 159 109 1 164 322 5 161 5.61e-13 72.0
MsaG009115 AT1G50700.1 31.373 153 99 4 175 323 73 223 6.22e-13 71.6
MsaG009115 AT5G60550.1 29.310 174 109 5 159 322 91 260 6.63e-13 71.2
MsaG009115 AT5G35410.2 29.655 145 98 2 179 322 15 156 1.01e-12 70.5
MsaG009115 AT1G50700.2 31.373 153 99 4 175 323 73 223 1.01e-12 71.2
MsaG009115 AT4G10730.2 31.169 154 102 3 170 322 22 172 1.16e-12 71.2
MsaG009115 AT4G10730.1 31.169 154 102 3 170 322 42 192 1.62e-12 70.9
MsaG009115 AT1G50240.3 33.981 103 62 2 406 508 161 257 1.90e-12 70.9
MsaG009115 AT1G50240.3 30.345 145 97 2 175 319 6 146 4.23e-12 69.7
MsaG009115 AT1G50240.2 33.981 103 62 2 406 508 161 257 1.90e-12 70.9
MsaG009115 AT1G50240.2 30.345 145 97 2 175 319 6 146 4.23e-12 69.7
MsaG009115 AT1G18350.1 34.899 149 84 5 178 322 48 187 2.30e-12 68.6
MsaG009115 AT3G15220.1 29.221 154 103 4 174 326 14 162 2.32e-12 70.5
MsaG009115 AT2G38490.1 34.437 151 90 4 175 322 28 172 2.40e-12 69.7
MsaG009115 AT4G14480.1 30.323 155 105 2 169 322 9 161 2.57e-12 69.7
MsaG009115 AT1G69220.1 29.560 159 99 3 173 326 247 397 2.59e-12 70.5
MsaG009115 AT5G35410.1 29.655 145 98 2 179 322 15 156 2.84e-12 69.3
MsaG009115 AT4G26070.5 28.922 204 120 7 139 322 1 199 3.02e-12 68.6
MsaG009115 AT3G20410.2 30.719 153 100 4 175 323 91 241 3.45e-12 69.3
MsaG009115 AT3G20410.1 30.719 153 100 4 175 323 91 241 3.45e-12 69.3
MsaG009115 AT4G04720.2 32.680 153 97 4 175 323 80 230 3.79e-12 69.3
MsaG009115 AT4G04720.1 32.680 153 97 4 175 323 80 230 3.79e-12 69.3
MsaG009115 AT1G01140.2 29.139 151 101 4 174 322 18 164 3.84e-12 68.9
MsaG009115 AT4G26070.1 30.968 155 100 4 170 322 63 212 3.84e-12 67.8
MsaG009115 AT5G19360.1 29.310 174 107 5 164 323 47 218 3.90e-12 69.3
MsaG009115 AT1G01140.1 29.139 151 101 4 174 322 18 164 3.92e-12 68.9
MsaG009115 AT4G21940.2 33.588 131 71 5 381 509 246 362 3.93e-12 69.3
MsaG009115 AT4G21940.3 33.588 131 71 5 381 509 246 362 4.04e-12 69.3
MsaG009115 AT1G01140.3 29.139 151 101 4 174 322 18 164 4.07e-12 68.9
MsaG009115 AT1G53570.7 28.161 174 121 2 161 332 200 371 4.35e-12 69.3
MsaG009115 AT1G53570.6 28.161 174 121 2 161 332 200 371 4.49e-12 68.9
MsaG009115 AT4G21940.1 33.588 131 71 5 381 509 246 362 4.59e-12 69.3
MsaG009115 AT5G14720.1 30.625 160 107 3 164 322 5 161 4.91e-12 69.3
MsaG009115 AT5G14720.2 30.625 160 107 3 164 322 5 161 4.91e-12 69.3
MsaG009115 AT1G53570.1 28.161 174 121 2 161 332 200 371 5.11e-12 68.9
MsaG009115 AT4G26070.2 29.730 185 109 6 154 322 33 212 5.14e-12 68.2
MsaG009115 AT4G26070.3 29.730 185 109 6 154 322 33 212 5.14e-12 68.2
MsaG009115 AT1G53570.2 28.161 174 121 2 161 332 200 371 5.33e-12 68.9
MsaG009115 AT1G53570.3 28.161 174 121 2 161 332 200 371 5.33e-12 68.9
MsaG009115 AT2G41860.1 31.373 153 99 3 175 323 54 204 5.46e-12 68.9
MsaG009115 AT1G32320.1 32.192 146 89 3 178 322 51 187 5.48e-12 67.4
MsaG009115 AT1G53570.4 28.161 174 121 2 161 332 200 371 5.66e-12 68.9
MsaG009115 AT4G26070.4 29.730 185 109 6 154 322 32 211 5.74e-12 67.8
MsaG009115 AT2G41860.2 31.373 153 99 3 175 323 54 204 5.81e-12 68.9
MsaG009115 AT5G12180.1 30.065 153 101 4 175 323 73 223 5.84e-12 68.9
MsaG009115 AT1G53165.1 28.205 156 103 5 172 326 15 162 6.08e-12 68.9
MsaG009115 AT1G53165.2 28.205 156 103 5 172 326 15 162 6.32e-12 68.9
MsaG009115 AT1G53165.3 28.205 156 103 5 172 326 15 162 6.40e-12 68.9
MsaG009115 AT5G57565.2 38.710 93 52 2 249 339 33 122 6.75e-12 63.5
MsaG009115 AT5G57565.6 38.710 93 52 2 249 339 33 122 6.75e-12 63.5
MsaG009115 AT5G58950.1 28.448 116 83 0 223 338 258 373 8.83e-12 68.2
MsaG009115 AT3G57530.2 30.968 155 101 3 173 323 61 213 9.08e-12 67.8
MsaG009115 AT3G57530.1 30.968 155 101 3 173 323 61 213 1.05e-11 67.8
MsaG009115 AT4G30960.1 29.054 148 102 1 175 322 24 168 1.15e-11 67.4
MsaG009115 AT1G49180.1 33.571 140 83 4 188 322 20 154 1.17e-11 67.4
MsaG009115 AT1G49180.2 33.571 140 83 4 188 322 20 154 1.20e-11 67.0
MsaG009115 AT5G57565.5 43.243 74 39 1 249 322 33 103 1.32e-11 63.2
MsaG009115 AT5G57565.1 43.243 74 39 1 249 322 33 103 1.32e-11 63.2
MsaG009115 AT5G21222.1 22.713 317 169 9 176 492 17 257 1.39e-11 68.2
MsaG009115 AT5G21222.2 22.713 317 169 9 176 492 17 257 1.39e-11 68.2
MsaG009115 AT5G21222.4 22.713 317 169 9 176 492 17 257 1.39e-11 68.2
MsaG009115 AT5G21222.3 22.713 317 169 9 176 492 17 257 1.39e-11 68.2
MsaG009115 AT1G08650.1 33.981 103 62 2 408 508 176 274 1.41e-11 65.9
MsaG009115 AT1G62400.1 26.639 244 160 7 90 328 11 240 1.67e-11 66.6
MsaG009115 AT3G50530.1 31.210 157 100 4 173 322 146 301 1.68e-11 67.4
MsaG009115 AT5G01820.1 34.028 144 92 1 179 322 26 166 1.70e-11 67.0
MsaG009115 AT2G17890.1 29.730 148 100 2 179 322 112 259 1.76e-11 67.4
MsaG009115 AT3G06030.1 30.814 172 110 5 174 339 67 235 1.87e-11 67.4
MsaG009115 AT5G12480.1 29.870 154 102 3 174 323 58 209 1.89e-11 67.0
MsaG009115 AT1G63700.1 30.556 144 96 2 181 322 406 547 2.13e-11 67.4
MsaG009115 AT1G63700.2 30.556 144 96 2 181 322 406 547 2.13e-11 67.4
MsaG009115 AT1G79640.6 30.675 163 105 4 163 322 1 158 2.59e-11 67.0
MsaG009115 AT3G50530.2 31.210 157 100 4 173 322 146 301 2.86e-11 66.6
MsaG009115 AT1G79640.1 30.675 163 105 4 163 322 1 158 2.91e-11 66.6
MsaG009115 AT2G23030.1 30.935 139 86 4 172 308 1 131 2.95e-11 65.5
MsaG009115 AT5G57565.4 43.243 74 39 1 249 322 33 103 3.07e-11 62.8
MsaG009115 AT1G79640.5 30.675 163 105 4 163 322 4 161 3.09e-11 66.6
MsaG009115 AT1G79640.2 30.675 163 105 4 163 322 1 158 3.27e-11 66.6
MsaG009115 AT1G79640.4 30.675 163 105 4 163 322 1 158 3.27e-11 66.6
MsaG009115 AT1G79640.3 30.675 163 105 4 163 322 1 158 3.27e-11 66.6
MsaG009115 AT4G35310.2 28.758 153 103 3 175 323 97 247 4.07e-11 66.2
MsaG009115 AT4G35310.1 28.758 153 103 3 175 323 97 247 4.07e-11 66.2
MsaG009115 AT4G29810.1 32.051 156 97 4 170 322 65 214 4.49e-11 65.1
MsaG009115 AT1G08650.2 34.783 92 58 1 408 497 176 267 5.17e-11 64.3
MsaG009115 AT4G29810.3 28.509 228 134 8 115 322 5 223 5.28e-11 64.7
MsaG009115 AT2G38910.1 30.201 149 98 3 179 323 138 284 5.50e-11 65.9
MsaG009115 AT5G04870.1 29.412 153 102 3 175 323 150 300 5.78e-11 65.9
MsaG009115 AT5G66210.3 27.451 153 107 2 174 322 61 213 5.81e-11 65.5
MsaG009115 AT4G40010.1 28.387 155 99 5 172 322 1 147 5.90e-11 64.7
MsaG009115 AT1G61950.1 29.870 154 101 4 175 323 98 249 6.03e-11 65.5
MsaG009115 AT2G17290.1 29.412 153 102 3 175 323 85 235 6.07e-11 65.5
MsaG009115 AT2G17290.2 29.412 153 102 3 175 323 85 235 6.07e-11 65.5
MsaG009115 AT4G29810.2 32.051 156 97 4 170 322 74 223 6.27e-11 64.7
MsaG009115 AT5G66210.1 27.451 153 107 2 174 322 61 213 6.45e-11 65.5
MsaG009115 AT5G66210.2 27.451 153 107 2 174 322 61 213 6.45e-11 65.5
MsaG009115 AT4G36070.1 28.758 153 105 3 174 322 70 222 6.52e-11 65.5
MsaG009115 AT1G48260.1 28.105 153 108 2 170 322 6 156 7.18e-11 65.1
MsaG009115 AT5G66210.6 28.571 154 104 4 174 322 61 213 7.37e-11 65.1
MsaG009115 AT5G66210.4 28.571 154 104 4 174 322 61 213 7.37e-11 65.1
MsaG009115 AT5G66210.5 27.451 153 107 2 174 322 61 213 8.11e-11 65.1
MsaG009115 AT5G07070.1 32.500 160 100 4 166 322 2 156 8.56e-11 64.7
MsaG009115 AT4G36070.2 29.730 148 100 3 179 322 75 222 9.39e-11 65.1
MsaG009115 AT3G21220.2 29.412 153 98 3 171 322 66 209 9.48e-11 63.9
MsaG009115 AT3G21220.1 29.412 153 98 3 171 322 66 209 9.48e-11 63.9

Find 102 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTCCTTTGATGATTTC+AGG 0.071146 2:+53168174 None:intergenic
GTTTATCTTGTTGAACTTAA+AGG 0.152708 2:-53169319 MsaT009115.1:CDS
GGTGAATTGTTTCCTGAATT+TGG 0.181457 2:+53169796 None:intergenic
AAAATCAGACTTCGGCTTAT+TGG 0.212196 2:-53168283 MsaT009115.1:CDS
CGCGAGCTAGCTCCACTTCC+TGG 0.222401 2:+53169502 None:intergenic
TCTTCAGTGAAACACTTATT+TGG 0.226884 2:+53169082 None:intergenic
TACGCTTCAGAAGCCTAAAA+TGG 0.265783 2:+53169365 None:intergenic
TATTAGAGGATTGTTGATTA+AGG 0.277558 2:-53167983 MsaT009115.1:CDS
AGAATACAAAGTAGGCAAAA+AGG 0.281162 2:+53169186 None:intergenic
TTGTATCCTGCGCCTTTAAA+AGG 0.288143 2:+53168084 None:intergenic
GGACTATCTGGAAACCTTAA+TGG 0.292707 2:+53168033 None:intergenic
ATGTTGTTGGACAGCCATTA+AGG 0.324509 2:-53168047 MsaT009115.1:CDS
CACATACTGGTGGTGATATA+AGG 0.333621 2:-53169435 MsaT009115.1:CDS
CTTCTGAAGCGTATCGGTTA+TGG 0.342911 2:-53169355 MsaT009115.1:CDS
AAGTGAATCTACTAAAATTA+TGG 0.343517 2:-53169713 MsaT009115.1:CDS
GCTCGTAGTTATCCAAATTC+AGG 0.346501 2:-53169808 MsaT009115.1:CDS
GGACTAATTTGAGGACTATC+TGG 0.359697 2:+53168021 None:intergenic
GTTGGTTCTGCCATTAGTTC+AGG 0.366969 2:+53168243 None:intergenic
CAAGTTGTTCATCAAACATT+AGG 0.380268 2:-53169459 MsaT009115.1:CDS
CAAACTGAAAGGGAGATTCT+TGG 0.384610 2:-53169223 MsaT009115.1:CDS
CTAAAATGGGTAAGATTTAG+AGG 0.389100 2:+53169379 None:intergenic
ACTCTTACCTCTGGTAAATC+AGG 0.394080 2:+53170072 None:intergenic
GTGGCTAGAGATCTTATTAG+AGG 0.414487 2:-53167997 MsaT009115.1:CDS
TTTGAAGGCATCCTGTTCCT+TGG 0.421819 2:+53169604 None:intergenic
GACTTCGGCTTATTGGTTAA+CGG 0.425065 2:-53168276 MsaT009115.1:CDS
CTTTGTCTTAAGAAAGCATC+AGG 0.434989 2:+53169628 None:intergenic
AAACCGCCTTCCTGAACTAA+TGG 0.437581 2:-53168253 MsaT009115.1:CDS
GACATTGATCTTACATTGGT+TGG 0.439163 2:+53168225 None:intergenic
TAAGACAAAGTCCAAGGAAC+AGG 0.446891 2:-53169615 MsaT009115.1:CDS
TCTGGCAACTTCTTATCAAC+TGG 0.449023 2:+53167799 None:intergenic
GACATGGTAGCGCGGTAGAT+TGG 0.451317 2:-53168152 MsaT009115.1:CDS
GCCACTGCTGTTTCCTCCGT+GGG 0.454869 2:+53168410 None:intergenic
AATCAAGGTGCGCCAGGAAG+TGG 0.462571 2:-53169514 MsaT009115.1:CDS
TTTGAAAAGTCTATAGCATC+TGG 0.466111 2:+53167850 None:intergenic
ACGAACAATCAAGGTGCGCC+AGG 0.476175 2:-53169520 MsaT009115.1:CDS
GCGGTAGATTGGTGGACTTT+CGG 0.480708 2:-53168141 MsaT009115.1:CDS
TTATATGCAATTCTCTTCTG+AGG 0.482724 2:+53167958 None:intergenic
GCTGTTTCCTCCGTGGGTGG+AGG 0.487032 2:+53168416 None:intergenic
TAAGATCAATGTCATTTGTC+GGG 0.497431 2:-53168215 MsaT009115.1:CDS
AAGAGAATTGCATATAAAAG+AGG 0.501521 2:-53167952 MsaT009115.1:CDS
GTAAGATCAATGTCATTTGT+CGG 0.503161 2:-53168216 MsaT009115.1:CDS
TCTTAGATCACAAACTGAAA+GGG 0.505400 2:-53169233 MsaT009115.1:CDS
TTTGAAACTCCTGATGGTAA+TGG 0.510458 2:+53169565 None:intergenic
TCAAACATTAGGCCACATAC+TGG 0.512666 2:-53169448 MsaT009115.1:CDS
CTAGCCACAGGACTAATTTG+AGG 0.519143 2:+53168012 None:intergenic
ATTACCATCAGGAGTTTCAA+AGG 0.524490 2:-53169563 MsaT009115.1:CDS
TACATCAGAAGAACAGTTTG+AGG 0.526242 2:-53169842 MsaT009115.1:CDS
TCAAAGTAAGAATACAAAGT+AGG 0.531625 2:+53169178 None:intergenic
AACTTCTTATCAACTGGTGG+TGG 0.533626 2:+53167805 None:intergenic
ACGCTTCAGAAGCCTAAAAT+GGG 0.536453 2:+53169366 None:intergenic
TTTGGTGGACTTAGTTTCTG+TGG 0.538215 2:+53169661 None:intergenic
AAATGACATTGATCTTACAT+TGG 0.539111 2:+53168221 None:intergenic
AATACAAAGACGAACAATCA+AGG 0.539318 2:-53169529 MsaT009115.1:CDS
GTCATCGTTCAATATACCTC+CGG 0.541237 2:+53168377 None:intergenic
CGTATCGGTTATGGAGACAT+TGG 0.541514 2:-53169346 MsaT009115.1:CDS
TCTATAGCATCTGGTATATG+TGG 0.543375 2:+53167859 None:intergenic
ATGACTGAGCAATCACTGCT+TGG 0.549509 2:+53168355 None:intergenic
TTACCATCAGGAGTTTCAAA+GGG 0.551201 2:-53169562 MsaT009115.1:CDS
ACTGCTGTTTCCTCCGTGGG+TGG 0.554517 2:+53168413 None:intergenic
CTTGAATACCTACACATGCT+TGG 0.557163 2:-53168558 MsaT009115.1:CDS
GCTGCAACTCCATTACCATC+AGG 0.558895 2:-53169574 MsaT009115.1:CDS
TTCTTAGATCACAAACTGAA+AGG 0.561341 2:-53169234 MsaT009115.1:CDS
TTTAGGCTTCTGAAGCGTAT+CGG 0.564580 2:-53169361 MsaT009115.1:CDS
TTTCATAGCAAAATGAGCAT+CGG 0.568160 2:+53169294 None:intergenic
CGTAAAGCAAAATCAGACTT+CGG 0.570522 2:-53168291 MsaT009115.1:CDS
ATGGTAGCGCGGTAGATTGG+TGG 0.577847 2:-53168149 MsaT009115.1:CDS
GTCAAGTCGTCCTCCACCCA+CGG 0.580571 2:-53168426 MsaT009115.1:CDS
CTAATAAGATCTCTAGCCAC+AGG 0.581174 2:+53168000 None:intergenic
AGCAGTGGCAATAGTGACTC+CGG 0.581556 2:-53168396 MsaT009115.1:CDS
TGCCACTGCTGTTTCCTCCG+TGG 0.583737 2:+53168409 None:intergenic
CTTTCTTAAGACAAAGTCCA+AGG 0.584113 2:-53169621 MsaT009115.1:CDS
CTTATATCACCACCAGTATG+TGG 0.584806 2:+53169436 None:intergenic
TTCTTTGAAGGTAAAATGCG+AGG 0.587582 2:+53168318 None:intergenic
GTTGCAGCATCAGAATTTGA+AGG 0.589150 2:+53169589 None:intergenic
CCTGAAATCATCAAAGGAGA+AGG 0.591326 2:-53168174 MsaT009115.1:CDS
GAGGACGACTTGACAAGTGT+TGG 0.600125 2:+53168435 None:intergenic
TGCTATGAAAGTAATGGACA+AGG 0.604106 2:-53169281 MsaT009115.1:CDS
GGCAACTTCTTATCAACTGG+TGG 0.604949 2:+53167802 None:intergenic
TTCTTGTATGAACTGTTGCA+CGG 0.608459 2:-53168114 MsaT009115.1:CDS
TTCAAGAGCTAACAAAACCT+CGG 0.611475 2:+53168575 None:intergenic
GTTCTGCCATTAGTTCAGGA+AGG 0.611819 2:+53168247 None:intergenic
CTGCCATTAGTTCAGGAAGG+CGG 0.618594 2:+53168250 None:intergenic
ATACCCTTTGAAACTCCTGA+TGG 0.618707 2:+53169559 None:intergenic
TGATAGGTTCTATGCTTCCG+AGG 0.624330 2:-53168592 MsaT009115.1:intron
CTCGCACCTGAAATCATCAA+AGG 0.625822 2:-53168180 MsaT009115.1:CDS
GTTTCACTGAAGAAGCTGCA+AGG 0.631263 2:-53169072 MsaT009115.1:intron
ATACTGGTGGTGATATAAGG+TGG 0.632455 2:-53169432 MsaT009115.1:CDS
TAGTCCTCAAATTAGTCCTG+TGG 0.636914 2:-53168016 MsaT009115.1:CDS
ATACAATGCCAAGCATGTGT+AGG 0.640197 2:+53168550 None:intergenic
ATAGCATCTGGTATATGTGG+TGG 0.649520 2:+53167862 None:intergenic
AACATTAGGCCACATACTGG+TGG 0.650784 2:-53169445 MsaT009115.1:CDS
CTGGTTATGGAGTATTGTAG+TGG 0.658084 2:-53169136 MsaT009115.1:CDS
TCTTTGAAGGTAAAATGCGA+GGG 0.659063 2:+53168319 None:intergenic
TACTGGTGGTGATATAAGGT+GGG 0.662193 2:-53169431 MsaT009115.1:CDS
ACCCACGGAGGAAACAGCAG+TGG 0.664175 2:-53168411 MsaT009115.1:CDS
AAGGTGGGATGCAATTAACA+TGG 0.670858 2:-53169416 MsaT009115.1:CDS
ATCATCAAAGGAGAAGGACA+TGG 0.671746 2:-53168168 MsaT009115.1:CDS
AGGAGAAGGACATGGTAGCG+CGG 0.677311 2:-53168160 MsaT009115.1:CDS
CAAAATGCCTGATTTACCAG+AGG 0.679546 2:-53170079 MsaT009115.1:intron
GTTATGGAGTATTGTAGTGG+CGG 0.691755 2:-53169133 MsaT009115.1:CDS
AGTGGCAATAGTGACTCCGG+AGG 0.713358 2:-53168393 MsaT009115.1:CDS
AAGTCGTCCTCCACCCACGG+AGG 0.747358 2:-53168423 MsaT009115.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 53167732 53170109 53167732 ID=MsaG009115
Chr2 mRNA 53167732 53170109 53167732 ID=MsaT009115.1;Parent=MsaG009115
Chr2 exon 53167732 53168608 53167732 ID=MsaT009115.1.exon3;Parent=MsaT009115.1
Chr2 CDS 53167732 53168608 53167732 ID=cds.MsaT009115.1;Parent=MsaT009115.1
Chr2 exon 53169073 53169875 53169073 ID=MsaT009115.1.exon2;Parent=MsaT009115.1
Chr2 CDS 53169073 53169875 53169073 ID=cds.MsaT009115.1;Parent=MsaT009115.1
Chr2 exon 53170080 53170109 53170080 ID=MsaT009115.1.exon1;Parent=MsaT009115.1
Chr2 CDS 53170080 53170109 53170080 ID=cds.MsaT009115.1;Parent=MsaT009115.1
Gene Sequence

>MsaT009115.1

ATGCCTATCAAAATGCCTGATTTACCAGAGATGAATCACAATACATCAGAAGAACAGTTTGAGGCGCATAATAATGCTCGTAGTTATCCAAATTCAGGAAACAATTCACCAACTCATCAGAAAAAGTTTAATCATGAAGAAAAAGAAGCATACAAAAATGAATATTCAGCAAGTGAATCTACTAAAATTATGGACGATTCAAATTCTGCAAATAAAACTAGACCACAGAAACTAAGTCCACCAAACAAAAACATTCCTGATGCTTTCTTAAGACAAAGTCCAAGGAACAGGATGCCTTCAAATTCTGATGCTGCAACTCCATTACCATCAGGAGTTTCAAAGGGTATGTCGACTAATACAAAGACGAACAATCAAGGTGCGCCAGGAAGTGGAGCTAGCTCGCGAAGCGACAGTTTAGAGAGCACAAGTTGTTCATCAAACATTAGGCCACATACTGGTGGTGATATAAGGTGGGATGCAATTAACATGGCTTCCAAAAATGGTCCTCTAAATCTTACCCATTTTAGGCTTCTGAAGCGTATCGGTTATGGAGACATTGGAAGTGTTTATCTTGTTGAACTTAAAGGAACCGATGCTCATTTTGCTATGAAAGTAATGGACAAGGCTGCTCTTATAAGTAGAAACAAACTTCTTAGATCACAAACTGAAAGGGAGATTCTTGGACTTCTTGATCATCCCTTTTTGCCTACTTTGTATTCTTACTTTGAGACTGATAAGTTTTACTGTCTGGTTATGGAGTATTGTAGTGGCGGTGATCTTCATTCGCTTCGACAGAAACAACCAAATAAGTGTTTCACTGAAGAAGCTGCAAGGTTCTATGCTTCCGAGGTTTTGTTAGCTCTTGAATACCTACACATGCTTGGCATTGTATACCGAGACTTAAAGCCAGAAAATCTTTTAGTTAGGGACGAAGGTCACATCATGCTCTCAGATTTCGATTTATCGCTTCGCTGTTCTGTCTGTCCAACACTTGTCAAGTCGTCCTCCACCCACGGAGGAAACAGCAGTGGCAATAGTGACTCCGGAGGTATATTGAACGATGACCAAGCAGTGATTGCTCAGTCATCAACAAGCTTCTTCCCTCGCATTTTACCTTCAAAGAAAAATCGTAAAGCAAAATCAGACTTCGGCTTATTGGTTAACGGAAACCGCCTTCCTGAACTAATGGCAGAACCAACCAATGTAAGATCAATGTCATTTGTCGGGACGCACGAGTATCTCGCACCTGAAATCATCAAAGGAGAAGGACATGGTAGCGCGGTAGATTGGTGGACTTTCGGTATCTTCTTGTATGAACTGTTGCACGGTGCAACGCCTTTTAAAGGCGCAGGATACAAAGCAACACTTTTCAATGTTGTTGGACAGCCATTAAGGTTTCCAGATAGTCCTCAAATTAGTCCTGTGGCTAGAGATCTTATTAGAGGATTGTTGATTAAGGAACCTCAGAAGAGAATTGCATATAAAAGAGGAGCAACAGAAATTAAACAGCATCCATTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGAAGTGCAACACCACCACATATACCAGATGCTATAGACTTTTCAAAGTATGCTAAAAAAGAAACAGCACCACCACCAGTTGATAAGAAGTTGCCAGATGTTACCAATGATAAAAAAGGCAAAACTTCAACTGATAATTCTTATGTAGATTTTGAGTATTTTTAG

Protein sequence

>MsaT009115.1

MPIKMPDLPEMNHNTSEEQFEAHNNARSYPNSGNNSPTHQKKFNHEEKEAYKNEYSASESTKIMDDSNSANKTRPQKLSPPNKNIPDAFLRQSPRNRMPSNSDAATPLPSGVSKGMSTNTKTNNQGAPGSGASSRSDSLESTSCSSNIRPHTGGDIRWDAINMASKNGPLNLTHFRLLKRIGYGDIGSVYLVELKGTDAHFAMKVMDKAALISRNKLLRSQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEYCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSTHGGNSSGNSDSGGILNDDQAVIAQSSTSFFPRILPSKKNRKAKSDFGLLVNGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISPVARDLIRGLLIKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDAIDFSKYAKKETAPPPVDKKLPDVTNDKKGKTSTDNSYVDFEYF*