AlfalfaGEDB | MsaG009289

M. sativa ssp. caerulea / MsaG009289

KEGG: -
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048580 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0090567 GO:0104004 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141
PFAM: PF06203.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG009289	XP_003596140.2	98.120	266	5	0	1	266	8	273	0.0	561

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG009289	tr\|A0A396JHI5\|A0A396JHI5_MEDTR	98.120	266	5	0	1	266	8	273	0.0	561

TFs/TRs:

Gene ID	Type	Classification
MsaG009289	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG009289	0.819110	2.410767e-52	5.179408e-50
MsaG000436	MsaG009289	0.824469	1.406198e-53	3.486308e-51
MsaG000717	MsaG009289	0.809372	3.336645e-50	5.612188e-48
MsaG000788	MsaG009289	0.826390	4.958184e-54	1.296199e-51
MsaG001468	MsaG009289	0.827379	2.885102e-54	7.753353e-52
MsaG001551	MsaG009289	0.808286	5.682411e-50	9.311101e-48
MsaG001730	MsaG009289	0.848500	1.116232e-59	5.747680e-57
MsaG001939	MsaG009289	0.829341	9.747139e-55	2.768073e-52
MsaG002043	MsaG009289	0.826094	5.825052e-54	1.510399e-51
MsaG002379	MsaG009289	0.829789	7.596125e-55	2.185127e-52
MsaG002481	MsaG009289	0.848966	8.296822e-60	4.340913e-57
MsaG002489	MsaG009289	0.819438	2.031076e-52	4.401294e-50
MsaG002603	MsaG009289	0.809799	2.703724e-50	4.594981e-48
MsaG002926	MsaG009289	0.811507	1.160261e-50	2.055719e-48
MsaG003329	MsaG009289	0.847986	1.545331e-59	7.822522e-57
MsaG003422	MsaG009289	0.869079	8.208767e-66	9.152902e-63
MsaG003470	MsaG009289	0.825023	1.042412e-53	2.623883e-51
MsaG003715	MsaG009289	0.806939	1.094072e-49	1.735889e-47
MsaG003767	MsaG009289	0.818652	3.059126e-52	6.493788e-50
MsaG003831	MsaG009289	0.802328	9.926058e-49	1.414804e-46
MsaG003861	MsaG009289	0.812114	8.570887e-51	1.541323e-48
MsaG004107	MsaG009289	0.807152	9.868249e-50	1.573652e-47
MsaG004112	MsaG009289	0.801100	1.768470e-48	2.451133e-46
MsaG004223	MsaG009289	0.828761	1.345552e-54	3.758835e-52
MsaG004280	MsaG009289	0.820110	1.428984e-52	3.152083e-50
MsaG004424	MsaG009289	0.809589	2.998761e-50	5.070592e-48
MsaG004452	MsaG009289	0.813009	5.474284e-51	1.006646e-48
MsaG004500	MsaG009289	0.818144	3.983862e-52	8.346139e-50
MsaG004556	MsaG009289	0.828307	1.729467e-54	4.770338e-52
MsaG004570	MsaG009289	0.818638	3.081973e-52	6.539874e-50
MsaG004718	MsaG009289	0.809668	2.884469e-50	4.886435e-48
MsaG004819	MsaG009289	0.813926	3.449230e-51	6.490114e-49
MsaG004887	MsaG009289	0.805777	1.918244e-49	2.961236e-47
MsaG004924	MsaG009289	0.814479	2.606218e-51	4.972372e-49
MsaG005100	MsaG009289	0.847295	2.388853e-59	1.181437e-56
MsaG005189	MsaG009289	0.815882	1.276192e-51	2.522720e-49
MsaG005333	MsaG009289	0.838771	4.342802e-57	1.631403e-54
MsaG005336	MsaG009289	0.805970	1.747805e-49	2.710419e-47
MsaG005410	MsaG009289	0.808412	5.341592e-50	8.779126e-48
MsaG005423	MsaG009289	0.808300	5.643269e-50	9.250036e-48
MsaG005496	MsaG009289	0.844614	1.269048e-58	5.741797e-56
MsaG005497	MsaG009289	0.868532	1.231216e-65	1.342509e-62
MsaG005526	MsaG009289	0.839053	3.674431e-57	1.392592e-54
MsaG005603	MsaG009289	0.849039	7.920690e-60	4.154484e-57
MsaG005722	MsaG009289	0.857155	3.850810e-62	2.690704e-59
MsaG005754	MsaG009289	0.801442	1.506351e-48	2.104124e-46
MsaG006316	MsaG009289	0.814865	2.143061e-51	4.128647e-49
MsaG006468	MsaG009289	0.820958	9.143949e-53	2.062792e-50
MsaG006471	MsaG009289	0.825715	7.161790e-54	1.837495e-51
MsaG006555	MsaG009289	0.849125	7.500358e-60	3.945604e-57
MsaG006657	MsaG009289	0.808578	4.924763e-50	8.126739e-48
MsaG007091	MsaG009289	0.801533	1.443002e-48	2.019793e-46
MsaG007182	MsaG009289	0.829699	7.988910e-55	2.292175e-52
MsaG007828	MsaG009289	0.859904	5.879869e-63	4.554571e-60
MsaG008495	MsaG009289	0.825007	1.051580e-53	2.645753e-51
MsaG008619	MsaG009289	0.819272	2.215121e-52	4.779337e-50
MsaG009289	MsaG009389	0.850413	3.288688e-60	1.807665e-57
MsaG009289	MsaG009648	0.984479	6.365634e-160	2.402962e-153
MsaG009289	MsaG009656	0.854538	2.223050e-61	1.412680e-58
MsaG009289	MsaG010706	0.859949	5.701853e-63	4.424516e-60
MsaG009289	MsaG010853	0.815248	1.763753e-51	3.431006e-49
MsaG009289	MsaG011175	0.809849	2.637815e-50	4.488301e-48
MsaG009289	MsaG011244	0.874176	1.710300e-67	2.372230e-64
MsaG009289	MsaG011217	0.815103	1.898237e-51	3.678954e-49
MsaG009289	MsaG011584	0.817561	5.385957e-52	1.111531e-49
MsaG009289	MsaG011704	0.816589	8.883274e-52	1.787961e-49
MsaG009289	MsaG011873	0.826693	4.202177e-54	1.107859e-51
MsaG009289	MsaG012723	0.800773	2.060553e-48	2.835150e-46
MsaG009289	MsaG013779	0.820276	1.309437e-52	2.901115e-50
MsaG009289	MsaG014076	0.816639	8.657767e-52	1.744776e-49
MsaG009289	MsaG014292	0.804054	4.378102e-49	6.493754e-47
MsaG009289	MsaG014815	0.801934	1.195005e-48	1.687996e-46
MsaG009289	MsaG014855	0.878734	4.638694e-69	7.897451e-66
MsaG009289	MsaG015018	0.878278	6.702523e-69	1.117277e-65
MsaG009289	MsaG015832	0.824088	1.726209e-53	4.235578e-51
MsaG009289	MsaG015871	0.871875	1.001870e-66	1.257521e-63
MsaG009289	MsaG016215	0.858390	1.663148e-62	1.216886e-59
MsaG009289	MsaG016273	0.807055	1.034586e-49	1.646007e-47
MsaG009289	MsaG016397	0.815599	1.474541e-51	2.894000e-49
MsaG009289	MsaG016492	0.836374	1.776669e-56	6.202039e-54
MsaG009289	MsaG016471	0.889596	4.614133e-73	1.331955e-69
MsaG009289	MsaG016772	0.801094	1.773689e-48	2.458004e-46
MsaG009289	MsaG016884	0.816936	7.432127e-52	1.509341e-49
MsaG009289	MsaG017009	0.806051	1.680622e-49	2.611268e-47
MsaG009289	MsaG017059	0.800517	2.323056e-48	3.177785e-46
MsaG009289	MsaG017051	0.806139	1.610683e-49	2.507828e-47
MsaG009289	MsaG017068	0.824040	1.770846e-53	4.339663e-51
MsaG009289	MsaG017183	0.810390	2.020005e-50	3.482599e-48
MsaG009289	MsaG017359	0.815800	1.330995e-51	2.625559e-49
MsaG009289	MsaG017495	0.848940	8.439437e-60	4.411613e-57
MsaG009289	MsaG017644	0.836256	1.903389e-56	6.620612e-54
MsaG009289	MsaG017719	0.821956	5.393296e-53	1.249271e-50
MsaG009289	MsaG017827	0.828906	1.241194e-54	3.481559e-52
MsaG009289	MsaG017842	0.816680	8.476373e-52	1.710054e-49
MsaG009289	MsaG017873	0.821545	6.707392e-53	1.536744e-50
MsaG009289	MsaG017954	0.819993	1.519360e-52	3.341052e-50
MsaG009289	MsaG017983	0.815433	1.605225e-51	3.137221e-49
MsaG009289	MsaG018054	0.827329	2.965253e-54	7.957643e-52
MsaG009289	MsaG018269	0.809518	3.104711e-50	5.240834e-48
MsaG009289	MsaG018333	0.812165	8.356362e-51	1.504626e-48
MsaG009289	MsaG018415	0.810178	2.243245e-50	3.847334e-48
MsaG009289	MsaG018598	0.808789	4.441914e-50	7.367209e-48
MsaG009289	MsaG018754	0.816120	1.129617e-51	2.246561e-49
MsaG009289	MsaG019160	0.809746	2.775352e-50	4.710587e-48
MsaG009289	MsaG019223	0.802861	7.714341e-49	1.113009e-46
MsaG009289	MsaG019237	0.867716	2.248170e-65	2.370522e-62
MsaG009289	MsaG019308	0.826331	5.119785e-54	1.336225e-51
MsaG009289	MsaG019466	0.803516	5.655086e-49	8.283584e-47
MsaG009289	MsaG019611	0.804714	3.194239e-49	4.810532e-47
MsaG009289	MsaG019649	0.850750	2.646601e-60	1.471883e-57
MsaG009289	MsaG019720	0.819408	2.062907e-52	4.466799e-50
MsaG009289	MsaG020021	0.801879	1.226781e-48	1.730711e-46
MsaG009289	MsaG020215	0.810617	1.804984e-50	3.129136e-48
MsaG009289	MsaG020240	0.801508	1.460024e-48	2.042453e-46
MsaG009289	MsaG020407	0.855929	8.790913e-62	5.873253e-59
MsaG009289	MsaG020412	0.830107	6.360228e-55	1.846348e-52
MsaG009289	MsaG020550	0.824310	1.531530e-53	3.780775e-51
MsaG009289	MsaG020591	0.817148	6.664633e-52	1.360901e-49
MsaG009289	MsaG020733	0.810834	1.621072e-50	2.825229e-48
MsaG009289	MsaG020992	0.821395	7.258018e-53	1.656339e-50
MsaG009289	MsaG021200	0.880931	7.738295e-70	1.458951e-66
MsaG009289	MsaG021222	0.802351	9.816766e-49	1.399968e-46
MsaG009289	MsaG022899	0.816110	1.135610e-51	2.257845e-49
MsaG009289	MsaG023117	0.804148	4.186497e-49	6.222873e-47
MsaG009289	MsaG023376	0.803964	4.569866e-49	6.763772e-47
MsaG009289	MsaG023626	0.845028	9.826544e-59	4.507563e-56
MsaG009289	MsaG023959	0.800473	2.371366e-48	3.240625e-46
MsaG009289	MsaG024061	0.806004	1.719312e-49	2.668288e-47
MsaG009289	MsaG024134	0.815147	1.856675e-51	3.602377e-49
MsaG009289	MsaG024295	0.875359	6.800787e-68	9.934606e-65
MsaG009289	MsaG024480	0.847121	2.665201e-59	1.310401e-56
MsaG009289	MsaG024745	0.822076	5.059064e-53	1.175614e-50
MsaG009289	MsaG026022	0.815648	1.438454e-51	2.826702e-49
MsaG009289	MsaG026686	0.807358	8.930324e-50	1.431066e-47
MsaG009289	MsaG026692	0.806400	1.420542e-49	2.225509e-47
MsaG009289	MsaG026985	0.800184	2.713288e-48	3.683693e-46
MsaG009289	MsaG026987	0.848627	1.029572e-59	5.324977e-57
MsaG009289	MsaG027376	0.881381	5.337837e-70	1.027539e-66
MsaG009289	MsaG027572	0.827251	3.094267e-54	8.285821e-52
MsaG009289	MsaG027828	0.846165	4.848831e-59	2.309228e-56
MsaG009289	MsaG027984	0.829528	8.784885e-55	2.508313e-52
MsaG009289	MsaG027988	0.800214	2.675680e-48	3.635064e-46
MsaG009289	MsaG028324	0.820405	1.223290e-52	2.719527e-50
MsaG009289	MsaG028679	0.868845	9.763584e-66	1.078216e-62
MsaG009289	MsaG029141	0.812695	6.406396e-51	1.168868e-48
MsaG009289	MsaG029091	0.810481	1.930653e-50	3.335960e-48
MsaG009289	MsaG029152	0.802012	1.152162e-48	1.630307e-46
MsaG009289	MsaG029307	0.871055	1.865831e-66	2.261016e-63
MsaG009289	MsaG029402	0.811263	1.309675e-50	2.306662e-48
MsaG009289	MsaG029546	0.836934	1.281097e-56	4.547769e-54
MsaG009289	MsaG029802	0.815447	1.593673e-51	3.115742e-49
MsaG009289	MsaG030039	0.803666	5.265370e-49	7.739534e-47
MsaG009289	MsaG030088	0.802223	1.043165e-48	1.483208e-46
MsaG009289	MsaG030649	0.818642	3.074802e-52	6.525390e-50
MsaG009289	MsaG031248	0.812246	8.024442e-51	1.447744e-48
MsaG009289	MsaG032279	0.844510	1.353500e-58	6.102455e-56
MsaG009289	MsaG032373	0.846910	3.042397e-59	1.485315e-56
MsaG009289	MsaG032901	0.816271	1.045730e-51	2.087753e-49
MsaG009289	MsaG032915	0.841330	9.405717e-58	3.828746e-55
MsaG009289	MsaG033231	0.804264	3.960776e-49	5.903283e-47
MsaG009289	MsaG033388	0.813572	4.122880e-51	7.689121e-49
MsaG009289	MsaG033818	0.804276	3.938506e-49	5.871741e-47
MsaG009289	MsaG034217	0.815576	1.492317e-51	2.927102e-49
MsaG009289	MsaG034590	0.816267	1.047836e-51	2.091744e-49
MsaG009289	MsaG034977	0.838285	5.788497e-57	2.141788e-54
MsaG009289	MsaG035743	0.814532	2.537104e-51	4.846860e-49
MsaG009289	MsaG036447	0.803071	6.984954e-49	1.012688e-46
MsaG009289	MsaG037179	0.829812	7.497909e-55	2.158257e-52
MsaG009289	MsaG039178	0.855085	1.545187e-61	1.001261e-58
MsaG009289	MsaG039734	0.852059	1.133339e-60	6.597470e-58
MsaG009289	MsaG040270	0.819192	2.309191e-52	4.971915e-50
MsaG009289	MsaG040577	0.812842	5.951200e-51	1.089791e-48
MsaG009289	MsaG041717	0.830241	5.899793e-55	1.719255e-52
MsaG009289	MsaG041800	0.845872	5.820201e-59	2.744792e-56
MsaG009289	MsaG042283	0.807496	8.348671e-50	1.342294e-47
MsaG009289	MsaG042714	0.814021	3.286103e-51	6.197757e-49
MsaG009289	MsaG043788	0.876409	2.974103e-68	4.554449e-65
MsaG009289	MsaG043817	0.824970	1.072772e-53	2.696339e-51
MsaG009289	MsaG044200	0.830154	6.193906e-55	1.800478e-52
MsaG009289	MsaG044278	0.825267	9.132572e-54	2.314188e-51
MsaG009289	MsaG044546	0.805015	2.765253e-49	4.193878e-47
MsaG009289	MsaG044661	0.817518	5.506557e-52	1.135153e-49
MsaG009289	MsaG044722	0.817185	6.538451e-52	1.336401e-49
MsaG009289	MsaG044864	0.822170	4.813176e-53	1.121294e-50
MsaG009289	MsaG044916	0.805761	1.932970e-49	2.982868e-47
MsaG009289	MsaG044997	0.805995	1.726675e-49	2.679139e-47
MsaG009289	MsaG045284	0.832160	2.002650e-55	6.169124e-53
MsaG009289	MsaG045356	0.801108	1.762048e-48	2.442654e-46
MsaG009289	MsaG045371	0.803274	6.343161e-49	9.239757e-47
MsaG009289	MsaG045387	0.809902	2.570559e-50	4.379381e-48
MsaG009289	MsaG045548	0.825549	7.837038e-54	2.001448e-51
MsaG009289	MsaG045743	0.831216	3.412599e-55	1.022626e-52
MsaG009289	MsaG045819	0.858234	1.850842e-62	1.346340e-59
MsaG009289	MsaG045822	0.811934	9.376794e-51	1.678928e-48
MsaG009289	MsaG045986	0.828120	1.918486e-54	5.264060e-52
MsaG009289	MsaG046173	0.834549	5.115311e-56	1.690464e-53
MsaG009289	MsaG046175	0.812146	8.433442e-51	1.517819e-48
MsaG009289	MsaG046306	0.804880	2.950591e-49	4.460870e-47
MsaG009289	MsaG046376	0.821075	8.596714e-53	1.945346e-50
MsaG009289	MsaG046540	0.863044	6.540138e-64	5.717919e-61
MsaG009289	MsaG046522	0.844618	1.266448e-58	5.730737e-56
MsaG009289	MsaG046497	0.819630	1.837455e-52	4.001570e-50
MsaG009289	MsaG046503	0.831286	3.281348e-55	9.852898e-53
MsaG009289	MsaG046603	0.810547	1.868676e-50	3.234051e-48
MsaG009289	MsaG046660	0.830636	4.727386e-55	1.393184e-52
MsaG009289	MsaG046730	0.822047	5.138977e-53	1.193268e-50
MsaG009289	MsaG046769	0.809244	3.553179e-50	5.957884e-48
MsaG009289	MsaG046902	0.819770	1.707255e-52	3.731824e-50
MsaG009289	MsaG046972	0.862580	9.079306e-64	7.794972e-61
MsaG009289	MsaG047069	0.828825	1.298736e-54	3.634569e-52
MsaG009289	MsaG047077	0.801272	1.631211e-48	2.269696e-46
MsaG009289	MsaG047097	0.829227	1.038972e-54	2.940688e-52
MsaG009289	MsaG004665	0.807914	6.811527e-50	1.106235e-47
MsaG009289	MsaG002000	0.908167	5.503079e-81	4.620739e-77
MsaG009289	MsaG001807	0.895301	2.454927e-75	9.608789e-72
MsaG009289	MsaG000634	0.806896	1.117344e-49	1.771007e-47
MsaG009289	MsaG005167	0.834689	4.717579e-56	1.565647e-53
MsaG009289	MsaG009513	0.805436	2.260254e-49	3.461462e-47
MsaG009289	MsaG009144	0.820387	1.235162e-52	2.744560e-50
MsaG009289	MsaG014278	0.833218	1.096899e-55	3.485111e-53
MsaG009289	MsaG013546	0.817517	5.510190e-52	1.135870e-49
MsaG009289	MsaG014164	0.817104	6.816820e-52	1.390395e-49
MsaG009289	MsaG011874	0.845128	9.239318e-59	4.251322e-56
MsaG009289	MsaG013252	0.826801	3.959788e-54	1.047065e-51
MsaG009289	MsaG011821	0.805420	2.276913e-49	3.485727e-47
MsaG009289	MsaG013496	0.817966	4.368232e-52	9.109560e-50
MsaG009289	MsaG019387	0.804807	3.055273e-49	4.611305e-47
MsaG009289	MsaG017934	0.805463	2.231136e-49	3.419027e-47
MsaG009289	MsaG023445	0.836477	1.672616e-56	5.856693e-54
MsaG009289	MsaG018678	0.824243	1.587916e-53	3.912706e-51
MsaG009289	MsaG023179	0.816560	9.018003e-52	1.813707e-49
MsaG009289	MsaG020399	0.843669	2.269654e-58	9.957484e-56
MsaG009289	MsaG020128	0.820805	9.913752e-53	2.227263e-50
MsaG009289	MsaG019817	0.847002	2.872199e-59	1.406562e-56
MsaG009289	MsaG017935	0.814250	2.927074e-51	5.552530e-49
MsaG009289	MsaG028734	0.837378	9.873703e-57	3.552897e-54
MsaG009289	MsaG029155	0.801490	1.472979e-48	2.059679e-46
MsaG009289	MsaG026803	0.827144	3.282469e-54	8.763220e-52
MsaG009289	MsaG027199	0.822376	4.313891e-53	1.010592e-50
MsaG009289	MsaG026407	0.824547	1.348103e-53	3.349510e-51
MsaG009289	MsaG028079	0.829701	7.976027e-55	2.288675e-52
MsaG009289	MsaG033602	0.832522	1.630243e-55	5.074909e-53
MsaG009289	MsaG031891	0.802611	8.683459e-49	1.245720e-46
MsaG009289	MsaG031186	0.815363	1.663048e-51	3.244525e-49
MsaG009289	MsaG031635	0.825138	9.792272e-54	2.472613e-51
MsaG009289	MsaG032486	0.818366	3.550173e-52	7.480261e-50
MsaG009289	MsaG032757	0.804199	4.084556e-49	6.078667e-47
MsaG009289	MsaG033082	0.853684	3.909091e-61	2.409413e-58
MsaG009289	MsaG033553	0.800344	2.518564e-48	3.431743e-46
MsaG009289	MsaG032056	0.809463	3.189763e-50	5.377262e-48
MsaG009289	MsaG031246	0.813473	4.332934e-51	8.060794e-49
MsaG009289	MsaG031847	0.817801	4.755829e-52	9.875706e-50
MsaG009289	MsaG033778	0.804393	3.724155e-49	5.567134e-47
MsaG009289	MsaG033259	0.803131	6.790260e-49	9.858217e-47
MsaG009289	MsaG033027	0.827870	2.201050e-54	5.997178e-52
MsaG009289	MsaG036286	0.825110	9.941080e-54	2.508293e-51
MsaG009289	MsaG036043	0.801489	1.473163e-48	2.059930e-46
MsaG009289	MsaG039696	0.837644	8.444674e-57	3.063494e-54
MsaG009289	MsaG037374	0.812187	8.261932e-51	1.488502e-48
MsaG009289	MsaG036661	0.811474	1.179691e-50	2.088448e-48
MsaG009289	MsaG035600	0.825055	1.024556e-53	2.581161e-51
MsaG009289	MsaG036651	0.854162	2.850840e-61	1.787521e-58
MsaG009289	MsaG037725	0.834953	4.052436e-56	1.355440e-53
MsaG009289	MsaG037051	0.823498	2.369859e-53	5.722441e-51
MsaG009289	MsaG036758	0.841894	6.689981e-58	2.772846e-55
MsaG009289	MsaG041442	0.824705	1.237423e-53	3.087738e-51
MsaG009289	MsaG044531	0.823693	2.134032e-53	5.180666e-51
MsaG009289	MsaG043116	0.806880	1.125958e-49	1.784029e-47
MsaG009289	MsaG043142	0.800368	2.490217e-48	3.395014e-46
MsaG009289	MsaG043047	0.808862	4.286201e-50	7.121547e-48
MsaG009289	MsaG046854	0.809911	2.559247e-50	4.361054e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG009289	MtrunA17_Chr2g0311591	98.120	266	5	0	1	266	8	273	0.0	561
MsaG009289	MtrunA17_Chr8g0387241	77.419	62	14	0	149	210	211	272	1.42e-24	100
MsaG009289	MtrunA17_Chr5g0397361	53.846	91	39	1	136	226	149	236	1.08e-23	96.3
MsaG009289	MtrunA17_Chr1g0168401	45.192	104	47	1	117	210	263	366	2.43e-22	95.1
MsaG009289	MtrunA17_Chr1g0186171	56.164	73	32	0	144	216	297	369	1.88e-21	92.8
MsaG009289	MtrunA17_Chr2g0327621	74.074	54	14	0	154	207	146	199	3.13e-19	84.3
MsaG009289	MtrunA17_Chr4g0030421	59.677	62	25	0	148	209	20	81	4.37e-18	78.2
MsaG009289	MtrunA17_Chr3g0126721	60.000	50	20	0	159	208	226	275	5.51e-13	67.4
MsaG009289	MtrunA17_Chr1g0147111	53.061	49	23	0	159	207	228	276	9.24e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG009289	AT3G12890.1	54.348	138	59	3	119	256	98	231	1.53e-43	148
MsaG009289	AT5G41380.1	75.806	62	15	0	149	210	201	262	5.57e-25	101
MsaG009289	AT1G63820.1	60.241	83	31	1	149	229	178	260	1.09e-23	97.8
MsaG009289	AT1G04500.4	42.857	126	55	3	100	224	237	346	4.75e-23	97.4
MsaG009289	AT1G04500.1	42.857	126	55	3	100	224	237	346	4.75e-23	97.4
MsaG009289	AT1G04500.3	42.857	126	55	3	100	224	228	337	4.84e-23	97.1
MsaG009289	AT2G33350.1	69.355	62	19	0	154	215	302	363	3.07e-22	95.5
MsaG009289	AT2G33350.2	69.355	62	19	0	154	215	301	362	3.14e-22	95.1
MsaG009289	AT2G33350.4	69.355	62	19	0	154	215	290	351	3.43e-22	95.1
MsaG009289	AT2G33350.5	69.355	62	19	0	154	215	310	371	4.39e-22	95.1
MsaG009289	AT5G59990.1	43.119	109	61	1	106	214	107	214	6.10e-15	72.8
MsaG009289	AT4G27900.1	53.061	49	23	0	159	207	210	258	6.12e-12	64.7
MsaG009289	AT4G27900.2	53.061	49	23	0	159	207	210	258	6.12e-12	64.7
MsaG009289	AT5G53420.2	55.102	49	22	0	159	207	135	183	7.42e-12	63.2
MsaG009289	AT5G53420.5	55.102	49	22	0	159	207	135	183	7.42e-12	63.2
MsaG009289	AT5G53420.4	55.102	49	22	0	159	207	135	183	7.42e-12	63.2
MsaG009289	AT5G53420.1	55.102	49	22	0	159	207	214	262	8.84e-12	64.3
MsaG009289	AT5G24930.1	30.460	174	102	6	47	214	186	346	7.97e-11	62.0

Find 52 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGCTTCTTGGATTCCAAATT+TGG	0.102128	2:+56768054	MsaT009289.1:CDS
TCTTGTTGCTCAACCAAATT+TGG	0.128585	2:-56768067	None:intergenic
ATTGTGACGCTTCGGCTTCT+TGG	0.223720	2:+56768041	MsaT009289.1:CDS
ATGCCTGTTTATGATAATTA+TGG	0.229776	2:+56767992	MsaT009289.1:CDS
TTTATTATCAGATTGTAAAA+TGG	0.231726	2:+56768105	MsaT009289.1:CDS
CTAATGTTGCAAGAGAAAAT+TGG	0.300530	2:+56768260	MsaT009289.1:CDS
AATAATCAGCCACATATTAT+TGG	0.303040	2:+56768172	MsaT009289.1:CDS
TGCTGATTCATTTCAGTTCC+AGG	0.315116	2:+56769131	MsaT009289.1:CDS
CACATTAATGAAGATTTCTA+TGG	0.323076	2:+56769108	MsaT009289.1:CDS
TCAAGAGGCCATGGCAAGTT+TGG	0.324460	2:+56769749	MsaT009289.1:CDS
TACCTTCCTACCTTTATGTT+TGG	0.326979	2:-56768784	None:intergenic
GCAACAAGATTTCGCTGTTC+CGG	0.338361	2:+56768081	MsaT009289.1:CDS
TTATTATCAGATTGTAAAAT+GGG	0.383948	2:+56768106	MsaT009289.1:CDS
GCTCCATAATTATCATAAAC+AGG	0.394748	2:-56767995	None:intergenic
GAAAATATATAAGACCTTGA+TGG	0.404923	2:-56768878	None:intergenic
GTCACTTGATTGTGACGCTT+CGG	0.429884	2:+56768033	MsaT009289.1:CDS
TAATGTTGCAAGAGAAAATT+GGG	0.435066	2:+56768261	MsaT009289.1:CDS
CATATCATCTGGTGATGAAT+GGG	0.440400	2:-56769781	None:intergenic
TGATAGAAGAGTAAGAGTGA+GGG	0.443578	2:+56769011	MsaT009289.1:CDS
GAAGAGTAAGAGTGAGGGGA+AGG	0.444124	2:+56769016	MsaT009289.1:CDS
AATTAATTGCAGGGGATTCA+AGG	0.444134	2:+56768736	MsaT009289.1:intron
ACATATCATCTGGTGATGAA+TGG	0.448395	2:-56769782	None:intergenic
AGTTGAAGAGCCAAACATAA+AGG	0.450736	2:+56768774	MsaT009289.1:CDS
GCAACATTAGGATAAGTTGT+AGG	0.468600	2:-56768247	None:intergenic
TAATTAATTCACATATCATC+TGG	0.472556	2:-56769792	None:intergenic
CTGATAGAAGAGTAAGAGTG+AGG	0.485744	2:+56769010	MsaT009289.1:CDS
AGAAGATCAATGTTGTGGTT+TGG	0.497235	2:+56768207	MsaT009289.1:CDS
GGAGGGTTTCAGAATTTCAA+TGG	0.499215	2:+56768139	MsaT009289.1:CDS
TTACAATCTGATAATAAAGC+CGG	0.515082	2:-56768100	None:intergenic
GAAGGTACTCAGAAGAAGAA+AGG	0.519719	2:+56768800	MsaT009289.1:CDS
GATAGAAGAGTAAGAGTGAG+GGG	0.529042	2:+56769012	MsaT009289.1:CDS
ATAGAAGTGATGAGGGATTG+TGG	0.543919	2:-56767879	None:intergenic
GCAGTTAAAGAATGAAGAAG+AGG	0.550467	2:+56769719	MsaT009289.1:intron
AACTCATGACCAATAATATG+TGG	0.550988	2:-56768181	None:intergenic
TAGTTTGTATAGAAGTGATG+AGG	0.558490	2:-56767887	None:intergenic
TATGGACAATACTATGATGT+GGG	0.559347	2:+56767952	MsaT009289.1:CDS
AGTTTGTATAGAAGTGATGA+GGG	0.571794	2:-56767886	None:intergenic
TCTGATTTCACCACACAACA+AGG	0.572962	2:+56767914	MsaT009289.1:CDS
GAAGAGCCAAACATAAAGGT+AGG	0.576416	2:+56768778	MsaT009289.1:CDS
AGCCAAACATAAAGGTAGGA+AGG	0.578415	2:+56768782	MsaT009289.1:CDS
TAAAGAATGAAGAAGAGGAC+TGG	0.579395	2:+56769724	MsaT009289.1:CDS
GGACTGGCTTCAAGAGGCCA+TGG	0.582269	2:+56769740	MsaT009289.1:CDS
AAACTTCAACAAAACCATCA+AGG	0.586667	2:+56768864	MsaT009289.1:CDS
TTATGGACAATACTATGATG+TGG	0.594335	2:+56767951	MsaT009289.1:CDS
TAAATAGACCAAACTTGCCA+TGG	0.601398	2:-56769757	None:intergenic
ACATTAGGATAAGTTGTAGG+TGG	0.601914	2:-56768244	None:intergenic
CTGATTTCACCACACAACAA+GGG	0.621194	2:+56767915	MsaT009289.1:CDS
AGAAGAGGACTGGCTTCAAG+AGG	0.645775	2:+56769734	MsaT009289.1:CDS
GACATGTGAAGAAGATCACA+TGG	0.652465	2:+56769056	MsaT009289.1:CDS
TTTGTAGAAGATCAATGTTG+TGG	0.662640	2:+56768202	MsaT009289.1:CDS
TGAAGAAAACCCTTGTTGTG+TGG	0.693927	2:-56767924	None:intergenic
ATGGACAATACTATGATGTG+GGG	0.739532	2:+56767953	MsaT009289.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	56767869	56769806	56767869	ID=MsaG009289
Chr2	mRNA	56767869	56769806	56767869	ID=MsaT009289.1;Parent=MsaG009289
Chr2	exon	56767869	56768282	56767869	ID=MsaT009289.1.exon1;Parent=MsaT009289.1
Chr2	CDS	56767869	56768282	56767869	ID=cds.MsaT009289.1;Parent=MsaT009289.1
Chr2	exon	56768748	56768885	56768748	ID=MsaT009289.1.exon2;Parent=MsaT009289.1
Chr2	CDS	56768748	56768885	56768748	ID=cds.MsaT009289.1;Parent=MsaT009289.1
Chr2	exon	56768988	56769152	56768988	ID=MsaT009289.1.exon3;Parent=MsaT009289.1
Chr2	CDS	56768988	56769152	56768988	ID=cds.MsaT009289.1;Parent=MsaT009289.1
Chr2	exon	56769723	56769806	56769723	ID=MsaT009289.1.exon4;Parent=MsaT009289.1
Chr2	CDS	56769723	56769806	56769723	ID=cds.MsaT009289.1;Parent=MsaT009289.1

Gene Sequence

>MsaT009289.1

ATGGCTTCTTCCACAATCCCTCATCACTTCTATACAAACTATACTTCTGATTTCACCACACAACAAGGGTTTTCTTCAACAATTATGGACAATACTATGATGTGGGGTTGTCAAGAAAATATAATGCCTGTTTATGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGACGCTTCGGCTTCTTGGATTCCAAATTTGGTTGAGCAACAAGATTTCGCTGTTCCGGCTTTATTATCAGATTGTAAAATGGGATTTTATGGTGGAGGGTTTCAGAATTTCAATGGTAGATATAATAATAATCAGCCACATATTATTGGTCATGAGTTTGTAGAAGATCAATGTTGTGGTTTGGTTGAAGATGTTAAACCACCTACAACTTATCCTAATGTTGCAAGAGAAAATTGGGGGATTCAAGGTAATCAACTAGCAGCAGTTGAAGAGCCAAACATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTTCGATATTTGAAGAAAAGAAATCAAAGAAACTTCAACAAAACCATCAAGTATGCATGTCGAAAAACTTTAGCTGATAGAAGAGTAAGAGTGAGGGGAAGGTTTGCAAGAAACAATGAGACATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATCACATTAATGAAGATTTCTATGGTGCTGATTCATTTCAGTTCCAGTTAAAGAATGAAGAAGAGGACTGGCTTCAAGAGGCCATGGCAAGTTTGGTCTATTTATCCCATTCATCACCAGATGATATGTGA

Protein sequence

>MsaT009289.1

MASSTIPHHFYTNYTSDFTTQQGFSSTIMDNTMMWGCQENIMPVYDNYGAFDQIVSLDCDASASWIPNLVEQQDFAVPALLSDCKMGFYGGGFQNFNGRYNNNQPHIIGHEFVEDQCCGLVEDVKPPTTYPNVARENWGIQGNQLAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNETCEEDHMATKKLENHHDHINEDFYGADSFQFQLKNEEEDWLQEAMASLVYLSHSSPDDM*