Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010078 | XP_024631543.1 | 97.475 | 396 | 10 | 0 | 1 | 396 | 1 | 396 | 0.0 | 815 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010078 | sp|Q0WT24|STOP2_ARATH | 47.207 | 358 | 127 | 7 | 44 | 388 | 53 | 361 | 1.17e-108 | 327 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010078 | tr|A0A396JFA8|A0A396JFA8_MEDTR | 97.475 | 396 | 10 | 0 | 1 | 396 | 1 | 396 | 0.0 | 815 |
Gene ID | Type | Classification |
---|---|---|
MsaG010078 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG009077 | MsaG010078 | 0.843925 | 1.939092e-58 | 8.576962e-56 |
MsaG010077 | MsaG010078 | 0.943473 | 3.416200e-102 | 4.396599e-97 |
MsaG010078 | MsaG038696 | 0.800653 | 2.179672e-48 | 2.990936e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010078 | MtrunA17_Chr2g0320341 | 97.475 | 396 | 10 | 0 | 1 | 396 | 1 | 396 | 0.0 | 815 |
MsaG010078 | MtrunA17_Chr1g0200421 | 61.350 | 163 | 57 | 2 | 229 | 389 | 236 | 394 | 7.84e-71 | 231 |
MsaG010078 | MtrunA17_Chr8g0382121 | 56.442 | 163 | 66 | 2 | 228 | 389 | 109 | 267 | 1.73e-64 | 208 |
MsaG010078 | MtrunA17_Chr3g0123941 | 58.896 | 163 | 61 | 1 | 227 | 389 | 120 | 276 | 6.34e-64 | 207 |
MsaG010078 | MtrunA17_Chr2g0326381 | 36.129 | 155 | 86 | 3 | 224 | 378 | 41 | 182 | 7.31e-26 | 108 |
MsaG010078 | MtrunA17_Chr1g0185121 | 34.555 | 191 | 110 | 4 | 188 | 378 | 15 | 190 | 5.98e-25 | 105 |
MsaG010078 | MtrunA17_Chr4g0029521 | 34.839 | 155 | 88 | 3 | 224 | 378 | 47 | 188 | 7.86e-25 | 105 |
MsaG010078 | MtrunA17_Chr8g0342421 | 35.484 | 155 | 86 | 3 | 224 | 378 | 71 | 211 | 7.94e-25 | 106 |
MsaG010078 | MtrunA17_Chr4g0053341 | 37.255 | 153 | 87 | 5 | 238 | 388 | 80 | 225 | 8.15e-25 | 101 |
MsaG010078 | MtrunA17_Chr1g0181381 | 34.839 | 155 | 88 | 3 | 224 | 378 | 47 | 188 | 1.78e-24 | 105 |
MsaG010078 | MtrunA17_Chr1g0198651 | 39.024 | 164 | 91 | 8 | 235 | 394 | 105 | 263 | 9.49e-24 | 100 |
MsaG010078 | MtrunA17_Chr1g0210821 | 36.129 | 155 | 85 | 4 | 224 | 378 | 53 | 193 | 1.36e-23 | 102 |
MsaG010078 | MtrunA17_Chr4g0040571 | 33.548 | 155 | 89 | 3 | 224 | 378 | 48 | 188 | 2.37e-23 | 101 |
MsaG010078 | MtrunA17_Chr3g0141431 | 34.194 | 155 | 89 | 3 | 224 | 378 | 31 | 172 | 3.13e-23 | 100 |
MsaG010078 | MtrunA17_Chr2g0330171 | 34.177 | 158 | 90 | 3 | 224 | 381 | 55 | 198 | 4.98e-23 | 100 |
MsaG010078 | MtrunA17_Chr5g0422571 | 38.961 | 154 | 86 | 5 | 236 | 387 | 105 | 252 | 5.23e-23 | 98.2 |
MsaG010078 | MtrunA17_Chr7g0263941 | 34.810 | 158 | 89 | 4 | 224 | 381 | 43 | 186 | 5.30e-23 | 99.8 |
MsaG010078 | MtrunA17_Chr8g0352011 | 37.584 | 149 | 85 | 4 | 238 | 385 | 173 | 314 | 5.55e-23 | 99.0 |
MsaG010078 | MtrunA17_Chr7g0268961 | 34.667 | 150 | 84 | 3 | 229 | 378 | 36 | 171 | 6.58e-23 | 100 |
MsaG010078 | MtrunA17_Chr1g0162971 | 34.810 | 158 | 89 | 4 | 224 | 381 | 50 | 193 | 7.10e-23 | 99.8 |
MsaG010078 | MtrunA17_Chr8g0373541 | 34.194 | 155 | 88 | 3 | 224 | 378 | 42 | 182 | 1.59e-22 | 99.4 |
MsaG010078 | MtrunA17_Chr7g0258011 | 36.913 | 149 | 87 | 3 | 238 | 386 | 183 | 324 | 2.00e-22 | 97.4 |
MsaG010078 | MtrunA17_Chr1g0151351 | 33.548 | 155 | 90 | 3 | 224 | 378 | 50 | 191 | 2.32e-22 | 98.6 |
MsaG010078 | MtrunA17_Chr2g0321291 | 36.129 | 155 | 91 | 4 | 235 | 388 | 137 | 284 | 2.63e-22 | 96.3 |
MsaG010078 | MtrunA17_Chr1g0191991 | 33.548 | 155 | 89 | 3 | 224 | 378 | 72 | 212 | 2.89e-22 | 98.6 |
MsaG010078 | MtrunA17_Chr1g0173841 | 37.584 | 149 | 84 | 4 | 246 | 392 | 230 | 371 | 3.06e-22 | 97.4 |
MsaG010078 | MtrunA17_Chr4g0026521 | 34.615 | 156 | 95 | 3 | 231 | 386 | 118 | 266 | 3.50e-22 | 95.9 |
MsaG010078 | MtrunA17_Chr1g0199101 | 34.194 | 155 | 88 | 4 | 224 | 378 | 56 | 196 | 3.90e-22 | 98.2 |
MsaG010078 | MtrunA17_Chr1g0163001 | 34.839 | 155 | 87 | 4 | 224 | 378 | 52 | 192 | 4.78e-22 | 97.8 |
MsaG010078 | MtrunA17_Chr2g0328921 | 34.615 | 156 | 95 | 3 | 231 | 386 | 138 | 286 | 1.50e-21 | 94.4 |
MsaG010078 | MtrunA17_Chr8g0375521 | 33.333 | 156 | 90 | 4 | 224 | 378 | 36 | 178 | 3.13e-20 | 92.0 |
MsaG010078 | MtrunA17_Chr6g0479921 | 33.333 | 156 | 89 | 5 | 224 | 378 | 38 | 179 | 1.21e-19 | 90.5 |
MsaG010078 | MtrunA17_Chr2g0324991 | 31.847 | 157 | 93 | 3 | 227 | 383 | 4 | 146 | 1.96e-18 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010078 | AT5G22890.1 | 47.207 | 358 | 127 | 7 | 44 | 388 | 53 | 361 | 1.19e-109 | 327 |
MsaG010078 | AT1G34370.3 | 59.639 | 166 | 67 | 0 | 224 | 389 | 14 | 179 | 1.94e-73 | 231 |
MsaG010078 | AT1G34370.2 | 36.533 | 375 | 192 | 8 | 21 | 389 | 55 | 389 | 9.65e-73 | 236 |
MsaG010078 | AT1G34370.1 | 36.533 | 375 | 192 | 8 | 21 | 389 | 55 | 389 | 9.65e-73 | 236 |
MsaG010078 | AT3G45260.2 | 36.129 | 155 | 86 | 3 | 224 | 378 | 48 | 189 | 1.19e-24 | 105 |
MsaG010078 | AT3G45260.1 | 36.129 | 155 | 86 | 3 | 224 | 378 | 48 | 189 | 1.19e-24 | 105 |
MsaG010078 | AT5G60470.2 | 34.839 | 155 | 88 | 4 | 224 | 378 | 53 | 194 | 1.40e-24 | 105 |
MsaG010078 | AT5G60470.3 | 34.839 | 155 | 88 | 4 | 224 | 378 | 49 | 190 | 1.49e-24 | 105 |
MsaG010078 | AT5G60470.1 | 35.333 | 150 | 84 | 4 | 229 | 378 | 49 | 185 | 2.72e-24 | 104 |
MsaG010078 | AT5G03150.1 | 35.484 | 155 | 87 | 3 | 224 | 378 | 62 | 203 | 4.61e-24 | 104 |
MsaG010078 | AT5G44160.1 | 34.194 | 155 | 88 | 3 | 224 | 378 | 46 | 186 | 6.34e-24 | 103 |
MsaG010078 | AT1G03840.1 | 33.548 | 155 | 89 | 3 | 224 | 378 | 50 | 190 | 8.16e-24 | 103 |
MsaG010078 | AT1G34790.1 | 39.490 | 157 | 86 | 5 | 238 | 392 | 138 | 287 | 1.24e-23 | 100 |
MsaG010078 | AT2G02080.1 | 36.774 | 155 | 84 | 4 | 224 | 378 | 63 | 203 | 1.48e-23 | 102 |
MsaG010078 | AT2G02080.4 | 36.774 | 155 | 84 | 4 | 224 | 378 | 63 | 203 | 1.48e-23 | 102 |
MsaG010078 | AT2G02080.5 | 36.774 | 155 | 84 | 4 | 224 | 378 | 63 | 203 | 1.48e-23 | 102 |
MsaG010078 | AT2G02080.3 | 36.774 | 155 | 84 | 4 | 224 | 378 | 63 | 203 | 1.48e-23 | 102 |
MsaG010078 | AT5G66730.1 | 35.484 | 155 | 86 | 4 | 224 | 378 | 41 | 181 | 2.11e-23 | 102 |
MsaG010078 | AT1G55110.3 | 34.839 | 155 | 88 | 3 | 224 | 378 | 72 | 213 | 2.46e-23 | 101 |
MsaG010078 | AT1G55110.1 | 34.839 | 155 | 88 | 3 | 224 | 378 | 72 | 213 | 2.46e-23 | 101 |
MsaG010078 | AT1G55110.2 | 34.839 | 155 | 88 | 3 | 224 | 378 | 72 | 213 | 2.46e-23 | 101 |
MsaG010078 | AT2G02070.2 | 36.129 | 155 | 85 | 4 | 224 | 378 | 61 | 201 | 2.76e-23 | 102 |
MsaG010078 | AT2G02070.1 | 36.129 | 155 | 85 | 4 | 224 | 378 | 61 | 201 | 2.76e-23 | 102 |
MsaG010078 | AT5G44160.2 | 34.211 | 152 | 86 | 3 | 227 | 378 | 10 | 147 | 2.86e-23 | 101 |
MsaG010078 | AT1G03840.2 | 33.553 | 152 | 87 | 3 | 227 | 378 | 51 | 188 | 3.07e-23 | 101 |
MsaG010078 | AT4G02670.2 | 35.484 | 155 | 87 | 3 | 224 | 378 | 64 | 205 | 8.87e-23 | 99.8 |
MsaG010078 | AT4G02670.1 | 35.484 | 155 | 87 | 3 | 224 | 378 | 62 | 203 | 9.57e-23 | 99.4 |
MsaG010078 | AT3G13810.6 | 33.548 | 155 | 90 | 3 | 224 | 378 | 60 | 201 | 2.24e-22 | 99.4 |
MsaG010078 | AT3G13810.5 | 33.548 | 155 | 90 | 3 | 224 | 378 | 74 | 215 | 2.28e-22 | 99.4 |
MsaG010078 | AT3G13810.4 | 33.548 | 155 | 90 | 3 | 224 | 378 | 79 | 220 | 2.37e-22 | 99.4 |
MsaG010078 | AT3G13810.1 | 33.548 | 155 | 90 | 3 | 224 | 378 | 79 | 220 | 2.37e-22 | 99.4 |
MsaG010078 | AT3G50700.1 | 34.839 | 155 | 87 | 4 | 224 | 378 | 43 | 183 | 3.49e-22 | 98.2 |
MsaG010078 | AT3G13810.3 | 33.553 | 152 | 88 | 3 | 227 | 378 | 69 | 207 | 8.12e-22 | 97.4 |
MsaG010078 | AT3G13810.2 | 33.553 | 152 | 88 | 3 | 227 | 378 | 83 | 221 | 8.14e-22 | 97.8 |
MsaG010078 | AT1G14580.1 | 34.194 | 155 | 88 | 4 | 224 | 378 | 62 | 202 | 8.60e-22 | 97.4 |
MsaG010078 | AT1G14580.2 | 34.194 | 155 | 88 | 4 | 224 | 378 | 62 | 202 | 8.60e-22 | 97.4 |
MsaG010078 | AT1G14580.3 | 34.194 | 155 | 88 | 4 | 224 | 378 | 76 | 216 | 9.37e-22 | 97.4 |
MsaG010078 | AT1G51220.1 | 39.161 | 143 | 79 | 4 | 246 | 387 | 180 | 315 | 1.32e-21 | 95.1 |
MsaG010078 | AT1G08290.1 | 38.194 | 144 | 80 | 5 | 246 | 387 | 182 | 318 | 1.46e-21 | 95.1 |
MsaG010078 | AT3G20880.1 | 39.161 | 143 | 79 | 4 | 246 | 387 | 258 | 393 | 1.56e-21 | 95.9 |
MsaG010078 | AT3G57670.1 | 36.913 | 149 | 87 | 3 | 238 | 386 | 211 | 352 | 2.00e-21 | 95.5 |
MsaG010078 | AT1G13290.1 | 39.007 | 141 | 81 | 3 | 246 | 386 | 103 | 238 | 3.24e-21 | 93.6 |
MsaG010078 | AT2G01940.1 | 35.669 | 157 | 85 | 5 | 224 | 378 | 53 | 195 | 1.56e-20 | 93.6 |
MsaG010078 | AT2G02080.6 | 37.594 | 133 | 69 | 4 | 246 | 378 | 8 | 126 | 8.03e-20 | 91.3 |
MsaG010078 | AT2G02080.2 | 37.594 | 133 | 69 | 4 | 246 | 378 | 8 | 126 | 8.03e-20 | 91.3 |
MsaG010078 | AT1G25250.3 | 33.333 | 156 | 91 | 4 | 224 | 378 | 42 | 185 | 4.70e-19 | 88.6 |
MsaG010078 | AT1G25250.1 | 33.333 | 153 | 89 | 4 | 227 | 378 | 22 | 162 | 1.33e-18 | 87.0 |
MsaG010078 | AT1G68130.1 | 32.692 | 156 | 91 | 4 | 224 | 378 | 50 | 192 | 2.48e-18 | 86.7 |
MsaG010078 | AT2G01940.3 | 35.862 | 145 | 77 | 5 | 224 | 366 | 53 | 183 | 8.91e-18 | 85.1 |
Find 85 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTGCATACATACATTT+TGG | 0.081024 | 2:-68585215 | None:intergenic |
ACTATCTCATTGTCACATTT+TGG | 0.084467 | 2:-68584896 | None:intergenic |
GACGATACATGCTTAAAATT+TGG | 0.102733 | 2:+68584851 | MsaT010078.1:CDS |
TCTAATATTCAATCAAATTT+TGG | 0.121082 | 2:+68584611 | MsaT010078.1:CDS |
AATTTGGGTCATCTTATAAT+TGG | 0.155349 | 2:+68584867 | MsaT010078.1:CDS |
TAATCTCTATTCTTAGTAAT+TGG | 0.163762 | 2:-68585061 | None:intergenic |
AGACCCTCTTATACTATTAT+TGG | 0.167733 | 2:-68584792 | None:intergenic |
GAAATTCCTTCCATGGAATT+TGG | 0.168179 | 2:-68584317 | None:intergenic |
TTGACGAGTCTTGTTGATTT+GGG | 0.269721 | 2:-68584436 | None:intergenic |
TTCTAGGAAAGATAAGCTTA+TGG | 0.293207 | 2:+68585333 | MsaT010078.1:CDS |
ACGATACATGCTTAAAATTT+GGG | 0.323396 | 2:+68584852 | MsaT010078.1:CDS |
ATAATAGTAACATTAATTAT+AGG | 0.329713 | 2:+68584720 | MsaT010078.1:CDS |
GAGATTGAAAAGGAGGGAAT+TGG | 0.343144 | 2:-68584357 | None:intergenic |
TCTAGGAAAGATAAGCTTAT+GGG | 0.346344 | 2:+68585334 | MsaT010078.1:CDS |
GTTGACGAGTCTTGTTGATT+TGG | 0.361562 | 2:-68584437 | None:intergenic |
ACAAGACTCGTCAACATCTA+TGG | 0.370241 | 2:+68584445 | MsaT010078.1:CDS |
ATTTGGGTCATCTTATAATT+GGG | 0.382161 | 2:+68584868 | MsaT010078.1:CDS |
TATGACAAACCATTGATAAC+CGG | 0.393477 | 2:-68585385 | None:intergenic |
TTTCGGTTCTTTCTGATTTG+AGG | 0.398405 | 2:+68585254 | MsaT010078.1:CDS |
GAAACCAATAATAGTATAAG+AGG | 0.400835 | 2:+68584788 | MsaT010078.1:CDS |
GTCCTCAAGAAGGGTGTAGA+TGG | 0.403741 | 2:+68585116 | MsaT010078.1:CDS |
AGAAACATTGTGGTGATCTT+AGG | 0.406285 | 2:+68585284 | MsaT010078.1:CDS |
AATCAAGTGCAAACTCTTGT+TGG | 0.406380 | 2:+68584401 | MsaT010078.1:CDS |
AAGCTTATCTTTCCTAGAAA+AGG | 0.414705 | 2:-68585329 | None:intergenic |
ACACATTATTGTCAAGTTTG+TGG | 0.417742 | 2:+68584953 | MsaT010078.1:CDS |
TGACAATGAGATAGTTGAAT+TGG | 0.426435 | 2:+68584904 | MsaT010078.1:CDS |
GGACATGTTGGTTTGTTTGT+GGG | 0.428197 | 2:+68585355 | MsaT010078.1:CDS |
GGGACATGTTGGTTTGTTTG+TGG | 0.441560 | 2:+68585354 | MsaT010078.1:CDS |
TACAATGACTTCTTGTATTG+TGG | 0.446519 | 2:-68584486 | None:intergenic |
TAATAATGAGTCAGAACCAT+TGG | 0.457675 | 2:+68584679 | MsaT010078.1:CDS |
GAGTAGAGAGATTGAAAAGG+AGG | 0.459196 | 2:-68584364 | None:intergenic |
TATTGTCAAGTTTGTGGCAA+AGG | 0.467134 | 2:+68584959 | MsaT010078.1:CDS |
TCAGAACCATTGGATTGGTT+TGG | 0.473677 | 2:+68584689 | MsaT010078.1:CDS |
ATTGTCAAGTTTGTGGCAAA+GGG | 0.476447 | 2:+68584960 | MsaT010078.1:CDS |
ATTGAAAAGGAGGGAATTGG+AGG | 0.476928 | 2:-68584354 | None:intergenic |
TGAACTAGAAATTCCTTCCA+TGG | 0.477549 | 2:-68584324 | None:intergenic |
GGACATCACCCGGTTATCAA+TGG | 0.481764 | 2:+68585376 | MsaT010078.1:CDS |
GACACAAACATTGATCTTAG+AGG | 0.484429 | 2:+68584641 | MsaT010078.1:CDS |
GGGTTTGAAATTGAAAATCA+AGG | 0.486940 | 2:+68584251 | MsaT010078.1:CDS |
TAATAGAAGTAGTACCTTGA+GGG | 0.496518 | 2:-68584556 | None:intergenic |
TGAGAGTAGAGAGATTGAAA+AGG | 0.497992 | 2:-68584367 | None:intergenic |
AGGATGATATTGATGATCAA+AGG | 0.500011 | 2:+68584747 | MsaT010078.1:CDS |
AGGATGCATATGAGAGCTCA+TGG | 0.501614 | 2:+68585004 | MsaT010078.1:CDS |
ATGTCAAGGACAACACCTCT+AGG | 0.501625 | 2:+68584230 | MsaT010078.1:CDS |
GATAAGCTTATGGGACATGT+TGG | 0.504366 | 2:+68585343 | MsaT010078.1:CDS |
TGACCATAGGAAACATTTGT+AGG | 0.507771 | 2:-68584274 | None:intergenic |
TTTGTTTGTGGGACATCACC+CGG | 0.508232 | 2:+68585366 | MsaT010078.1:CDS |
GATGCCATTGCCAAATTCCA+TGG | 0.512772 | 2:+68584307 | MsaT010078.1:CDS |
TGACTTCAAAGGTTGAAACT+TGG | 0.516503 | 2:-68585152 | None:intergenic |
ATGAGTCAGAACCATTGGAT+TGG | 0.516915 | 2:+68584684 | MsaT010078.1:CDS |
AGGCCTACAAATGTTTCCTA+TGG | 0.518719 | 2:+68584271 | MsaT010078.1:CDS |
CCTTCCATGGAATTTGGCAA+TGG | 0.522098 | 2:-68584311 | None:intergenic |
GCACAAATCAATGACTTCAA+AGG | 0.522700 | 2:-68585163 | None:intergenic |
AAATATTCATGTCCTCAAGA+AGG | 0.523706 | 2:+68585106 | MsaT010078.1:CDS |
AGTAGAGAGATTGAAAAGGA+GGG | 0.529561 | 2:-68584363 | None:intergenic |
GGATGATATTGATGATCAAA+GGG | 0.531710 | 2:+68584748 | MsaT010078.1:CDS |
TTGACAATAATGTGTGTACT+TGG | 0.534066 | 2:-68584945 | None:intergenic |
GGGTCATCTTATAATTGGGT+CGG | 0.542248 | 2:+68584872 | MsaT010078.1:CDS |
TCAAGAGGGATGCAAATTTG+AGG | 0.543405 | 2:+68584984 | MsaT010078.1:CDS |
TTGTATTGTGGAGTTCATTG+TGG | 0.555990 | 2:-68584474 | None:intergenic |
AATATTCATGTCCTCAAGAA+GGG | 0.556447 | 2:+68585107 | MsaT010078.1:CDS |
TAACATTAATTATAGGCTCA+AGG | 0.571276 | 2:+68584727 | MsaT010078.1:CDS |
TTCCATCTACACCCTTCTTG+AGG | 0.572019 | 2:-68585118 | None:intergenic |
GGAAACTAAGAGCAATCTGT+TGG | 0.579939 | 2:-68584535 | None:intergenic |
CCATTGCCAAATTCCATGGA+AGG | 0.581643 | 2:+68584311 | MsaT010078.1:CDS |
CTTTCACCAAACCAATCCAA+TGG | 0.587496 | 2:-68584695 | None:intergenic |
TTTGTGGCAAAGGGTTCAAG+AGG | 0.595190 | 2:+68584969 | MsaT010078.1:CDS |
ACAAATGTTTCCTATGGTCA+CGG | 0.597671 | 2:+68584277 | MsaT010078.1:CDS |
ATGACAAACCATTGATAACC+GGG | 0.597673 | 2:-68585384 | None:intergenic |
CTTAGGTGGCAGTGTTCATG+TGG | 0.605201 | 2:+68585301 | MsaT010078.1:CDS |
ATCAAATCTTCCGTGACCAT+AGG | 0.609192 | 2:-68584287 | None:intergenic |
TGTCAAGGACAACACCTCTA+GGG | 0.610871 | 2:+68584231 | MsaT010078.1:CDS |
AACATTGTGGTGATCTTAGG+TGG | 0.610982 | 2:+68585287 | MsaT010078.1:CDS |
TGACGAGTCTTGTTGATTTG+GGG | 0.614111 | 2:-68584435 | None:intergenic |
ATTGCTCTTAGTTTCCCTCA+AGG | 0.618106 | 2:+68584542 | MsaT010078.1:CDS |
TTAATAGAAGTAGTACCTTG+AGG | 0.620130 | 2:-68584557 | None:intergenic |
AAACCAATAATAGTATAAGA+GGG | 0.620427 | 2:+68584789 | MsaT010078.1:CDS |
TTGAAAAGGAGGGAATTGGA+GGG | 0.623406 | 2:-68584353 | None:intergenic |
GGATGCATATGAGAGCTCAT+GGG | 0.624368 | 2:+68585005 | MsaT010078.1:CDS |
GCAAGTGAACATCATTGATG+TGG | 0.636466 | 2:-68584513 | None:intergenic |
CCAAAATGTATGTATGCAAG+AGG | 0.650780 | 2:+68585215 | MsaT010078.1:CDS |
TGAGATAGTTGAATTGGACG+CGG | 0.672074 | 2:+68584910 | MsaT010078.1:CDS |
GATGCATATGAGAGCTCATG+GGG | 0.685805 | 2:+68585006 | MsaT010078.1:CDS |
TTGTGGCAAAGGGTTCAAGA+GGG | 0.697728 | 2:+68584970 | MsaT010078.1:CDS |
AGGACACATGAGAAACATTG+TGG | 0.713628 | 2:+68585274 | MsaT010078.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 68584227 | 68585426 | 68584227 | ID=MsaG010078 |
Chr2 | mRNA | 68584227 | 68585426 | 68584227 | ID=MsaT010078.1;Parent=MsaG010078 |
Chr2 | exon | 68584227 | 68585426 | 68584227 | ID=MsaT010078.1.exon1;Parent=MsaT010078.1 |
Chr2 | CDS | 68584227 | 68585426 | 68584227 | ID=cds.MsaT010078.1;Parent=MsaT010078.1 |
Gene Sequence |
Protein sequence |