AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG010128

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010128 MtrunA17_Chr2g0320751 97.933 1016 19 1 1 1014 1 1016 0.0 2058
MsaG010128 MtrunA17_Chr1g0168031 47.152 948 420 14 104 1014 250 1153 0.0 886
MsaG010128 MtrunA17_Chr7g0255821 31.338 852 464 21 156 993 53 797 3.23e-121 390
MsaG010128 MtrunA17_Chr1g0212331 27.299 1022 517 24 130 1013 105 1038 3.70e-92 317
MsaG010128 MtrunA17_Chr4g0024921 30.833 720 358 20 393 1014 257 934 2.06e-90 310
MsaG010128 MtrunA17_Chr2g0281601 31.599 538 252 12 319 803 542 1016 1.68e-63 235
MsaG010128 MtrunA17_Chr2g0281601 41.875 160 89 2 858 1013 1142 1301 3.77e-34 142
MsaG010128 MtrunA17_Chr4g0017211 24.927 686 340 20 362 1013 1438 1982 1.26e-41 167
MsaG010128 MtrunA17_Chr1g0163011 25.835 569 323 17 461 1000 224 722 7.24e-41 162
MsaG010128 MtrunA17_Chr3g0083491 25.041 607 325 21 474 990 729 1295 8.05e-38 154
MsaG010128 MtrunA17_Chr5g0428401 28.716 296 161 6 472 721 485 776 9.66e-31 131
MsaG010128 MtrunA17_Chr5g0428401 28.105 306 147 8 765 1000 1338 1640 6.83e-22 102
MsaG010128 MtrunA17_Chr5g0403921 35.632 174 110 2 810 981 467 640 5.09e-25 112
MsaG010128 MtrunA17_Chr5g0403921 26.776 366 179 11 389 733 197 494 4.40e-20 96.3
MsaG010128 MtrunA17_Chr7g0257101 38.194 144 89 0 838 981 1182 1325 3.33e-24 110
MsaG010128 MtrunA17_Chr7g0257101 27.457 346 167 11 397 723 599 879 1.08e-20 99.0
MsaG010128 MtrunA17_Chr4g0066741 25.688 327 176 7 397 723 209 468 5.48e-23 105
MsaG010128 MtrunA17_Chr4g0066741 33.766 154 98 3 853 1004 493 644 1.43e-16 85.1
MsaG010128 MtrunA17_Chr2g0286291 25.076 327 178 7 397 723 212 471 5.83e-23 105
MsaG010128 MtrunA17_Chr2g0286291 34.752 141 89 2 865 1004 509 647 4.25e-16 83.6
MsaG010128 MtrunA17_Chr8g0384531 35.211 142 92 0 847 988 739 880 6.99e-23 105
MsaG010128 MtrunA17_Chr8g0384531 25.091 275 168 9 478 728 436 696 3.62e-13 74.3
MsaG010128 MtrunA17_Chr1g0175191 34.559 136 88 1 857 992 1071 1205 2.66e-22 104
MsaG010128 MtrunA17_Chr1g0175191 24.855 346 173 10 396 727 541 813 2.45e-20 97.8
MsaG010128 MtrunA17_Chr1g0205891 25.429 350 171 11 397 729 397 673 2.66e-21 100
MsaG010128 MtrunA17_Chr1g0205891 35.294 136 85 2 857 991 695 828 1.20e-19 95.1
MsaG010128 MtrunA17_Chr3g0095091 23.894 339 179 7 398 726 593 862 5.87e-21 99.8
MsaG010128 MtrunA17_Chr3g0095091 33.742 163 105 2 840 1001 879 1039 4.31e-17 87.0
MsaG010128 MtrunA17_Chr3g0137091 31.214 173 114 3 842 1009 604 776 1.10e-20 99.0
MsaG010128 MtrunA17_Chr3g0137091 22.222 351 177 8 398 724 311 589 6.93e-17 86.3
MsaG010128 MtrunA17_Chr5g0394201 36.029 136 84 2 857 991 681 814 1.79e-20 97.8
MsaG010128 MtrunA17_Chr5g0394201 23.148 432 196 13 329 743 362 674 4.46e-20 96.7
MsaG010128 MtrunA17_Chr1g0183681 29.493 217 143 4 801 1013 691 901 9.43e-20 95.5
MsaG010128 MtrunA17_Chr5g0442141 24.340 341 175 10 398 726 639 908 1.23e-19 95.5
MsaG010128 MtrunA17_Chr5g0442141 33.537 164 105 3 847 1008 932 1093 4.40e-17 87.0
MsaG010128 MtrunA17_Chr4g0052341 31.515 165 110 2 847 1009 1059 1222 1.42e-19 95.5
MsaG010128 MtrunA17_Chr4g0052341 23.019 265 162 9 478 724 798 1038 2.35e-15 81.6
MsaG010128 MtrunA17_Chr5g0393461 35.556 180 107 5 844 1014 533 712 2.21e-19 94.4
MsaG010128 MtrunA17_Chr5g0393461 22.472 356 177 9 396 724 210 493 1.07e-12 72.4
MsaG010128 MtrunA17_Chr4g0040301 34.667 150 94 1 852 997 380 529 6.10e-19 92.4
MsaG010128 MtrunA17_Chr4g0040301 24.407 295 157 8 404 685 18 259 8.30e-14 75.9
MsaG010128 MtrunA17_Chr4g0066651 26.415 265 159 10 475 723 1039 1283 1.04e-18 92.8
MsaG010128 MtrunA17_Chr4g0066651 33.129 163 103 2 857 1013 1317 1479 1.32e-17 89.0
MsaG010128 MtrunA17_Chr8g0348721 36.306 157 92 5 815 968 1283 1434 4.13e-18 90.5
MsaG010128 MtrunA17_Chr8g0348721 24.011 379 187 12 397 748 1008 1312 6.10e-16 83.6
MsaG010128 MtrunA17_Chr7g0248031 33.514 185 112 5 815 996 1291 1467 7.05e-18 89.7
MsaG010128 MtrunA17_Chr7g0248031 25.068 367 182 11 397 738 1015 1313 3.90e-15 80.9
MsaG010128 MtrunA17_Chr7g0232121 32.716 162 94 2 847 996 364 522 5.55e-17 86.3
MsaG010128 MtrunA17_Chr7g0232121 24.823 282 174 8 465 723 79 345 2.60e-13 74.3
MsaG010128 MtrunA17_Chr7g0231521 32.515 163 95 2 847 997 285 444 6.39e-17 86.3
MsaG010128 MtrunA17_Chr1g0190381 30.055 183 113 3 846 1013 186 368 1.18e-16 84.7
MsaG010128 MtrunA17_Chr4g0069451 27.742 155 109 2 840 991 460 614 5.76e-14 76.3
MsaG010128 MtrunA17_Chr7g0232991 30.496 141 93 2 866 1001 479 619 1.74e-13 74.7
MsaG010128 MtrunA17_Chr2g0320781 34.815 135 76 3 866 991 111 242 2.85e-13 70.9
MsaG010128 MtrunA17_Chr7g0233001 34.848 132 80 2 866 991 339 470 1.65e-12 71.2
MsaG010128 MtrunA17_Chr4g0047081 34.091 132 81 2 866 991 1054 1185 4.05e-12 70.9
MsaG010128 MtrunA17_Chr7g0224051 35.833 120 71 3 866 979 936 1055 6.13e-12 70.1
MsaG010128 MtrunA17_Chr7g0232971 35.354 99 63 1 894 991 1149 1247 2.08e-11 68.6
MsaG010128 MtrunA17_Chr7g0233021 32.215 149 90 4 851 991 1036 1181 4.17e-11 67.4
MsaG010128 MtrunA17_Chr7g0225791 32.576 132 83 2 866 991 1104 1235 5.26e-11 67.0
MsaG010128 MtrunA17_Chr3g0114161 36.792 106 65 2 876 979 1081 1186 5.87e-11 67.0
MsaG010128 MtrunA17_Chr2g0296421 30.000 150 98 3 846 989 846 994 6.09e-11 67.0
MsaG010128 MtrunA17_Chr5g0437621 40.230 87 51 1 894 979 1156 1242 8.06e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010128 AT5G22750.1 69.817 1037 282 11 1 1014 1 1029 0.0 1466
MsaG010128 AT5G43530.1 53.145 922 383 10 102 1013 394 1276 0.0 989
MsaG010128 AT5G05130.1 34.188 702 391 17 321 1005 221 868 6.77e-118 383
MsaG010128 AT1G50410.2 30.815 834 370 24 319 1013 214 979 3.75e-106 354
MsaG010128 AT1G50410.1 30.815 834 370 24 319 1013 214 979 3.75e-106 354
MsaG010128 AT1G50410.3 30.815 834 370 24 319 1013 214 979 3.75e-106 354
MsaG010128 AT1G61140.3 31.880 734 395 17 370 1013 400 1118 1.96e-103 350
MsaG010128 AT1G61140.1 31.880 734 395 17 370 1013 558 1276 2.93e-102 349
MsaG010128 AT1G11100.5 32.016 759 388 19 319 1013 387 1081 6.20e-101 342
MsaG010128 AT1G11100.1 32.016 759 388 19 319 1013 530 1224 6.77e-100 342
MsaG010128 AT1G11100.3 30.262 803 388 19 319 1013 387 1125 2.84e-96 330
MsaG010128 AT1G11100.2 30.262 803 388 19 319 1013 529 1267 1.69e-95 330
MsaG010128 AT1G11100.4 30.262 803 388 19 319 1013 530 1268 2.16e-95 329
MsaG010128 AT3G20010.2 30.749 761 365 19 396 1013 13 754 7.35e-95 318
MsaG010128 AT1G05120.1 29.769 823 375 20 296 1014 109 832 8.88e-95 320
MsaG010128 AT3G20010.3 30.749 761 365 19 396 1013 38 779 1.60e-94 318
MsaG010128 AT1G05120.2 29.891 823 374 20 296 1014 152 875 3.03e-94 319
MsaG010128 AT1G02670.6 30.739 771 383 18 281 1014 7 663 2.51e-93 311
MsaG010128 AT3G20010.1 29.153 885 420 22 274 1013 223 1045 4.64e-93 319
MsaG010128 AT3G20010.5 29.153 885 420 22 274 1013 223 1045 4.64e-93 319
MsaG010128 AT3G20010.7 29.153 885 420 22 274 1013 223 1045 4.64e-93 319
MsaG010128 AT1G02670.3 31.416 678 318 15 372 1013 123 689 5.82e-91 305
MsaG010128 AT1G02670.5 30.886 722 351 17 281 968 7 614 1.21e-85 289
MsaG010128 AT1G02670.2 31.587 630 287 14 372 968 123 641 3.56e-83 283
MsaG010128 AT1G02670.1 29.779 769 397 18 264 1013 33 677 1.68e-81 279
MsaG010128 AT1G02670.7 30.060 662 325 15 372 1013 123 666 1.88e-79 273
MsaG010128 AT3G16600.1 30.414 628 300 15 396 999 76 590 8.74e-79 271
MsaG010128 AT1G50410.4 29.332 733 315 23 319 916 214 878 2.76e-74 263
MsaG010128 AT1G61140.2 34.230 409 207 8 370 724 565 965 4.93e-60 223
MsaG010128 AT3G20010.4 29.365 630 299 17 274 819 223 790 4.50e-55 208
MsaG010128 AT3G20010.6 29.365 630 299 17 274 819 223 790 4.50e-55 208
MsaG010128 AT3G20010.8 29.365 630 299 17 274 819 223 790 4.50e-55 208
MsaG010128 AT1G02670.4 32.031 384 176 8 372 724 123 452 9.18e-50 185
MsaG010128 AT3G54280.1 25.000 644 325 18 371 988 1446 1957 5.25e-41 165
MsaG010128 AT3G54280.2 25.000 644 325 18 371 988 1477 1988 5.50e-41 165
MsaG010128 AT3G54460.2 25.081 614 348 24 474 1005 456 1039 2.03e-32 137
MsaG010128 AT3G54460.1 25.081 614 348 24 474 1005 753 1336 2.36e-32 137
MsaG010128 AT2G40770.2 28.571 294 157 7 472 721 497 781 3.66e-32 136
MsaG010128 AT2G40770.2 29.150 247 144 7 779 994 1344 1590 1.19e-22 105
MsaG010128 AT2G40770.1 28.571 294 157 7 472 721 497 781 3.66e-32 136
MsaG010128 AT2G40770.1 29.150 247 144 7 779 994 1344 1590 1.19e-22 105
MsaG010128 AT2G40770.3 28.571 294 157 7 472 721 497 781 3.66e-32 136
MsaG010128 AT2G40770.3 29.150 247 144 7 779 994 1344 1590 1.19e-22 105
MsaG010128 AT2G02090.1 24.839 620 314 24 396 988 234 728 8.67e-30 127
MsaG010128 AT5G63950.1 35.632 174 111 1 842 1014 726 899 1.13e-26 118
MsaG010128 AT5G63950.1 23.192 401 218 12 351 728 354 687 1.09e-14 79.7
MsaG010128 AT5G63950.2 35.632 174 111 1 842 1014 709 882 1.13e-26 118
MsaG010128 AT5G63950.2 22.762 391 215 11 351 728 354 670 4.33e-13 74.3
MsaG010128 AT3G06400.2 24.695 328 178 6 397 723 210 469 7.12e-24 109
MsaG010128 AT3G06400.2 34.043 141 90 2 865 1004 507 645 3.14e-16 84.7
MsaG010128 AT5G66750.1 35.593 177 112 2 807 981 482 658 7.23e-24 108
MsaG010128 AT5G66750.1 25.706 354 190 10 389 729 215 508 1.05e-17 89.0
MsaG010128 AT3G06400.1 24.695 328 178 6 397 723 210 469 7.62e-24 109
MsaG010128 AT3G06400.1 34.043 141 90 2 865 1004 507 645 3.30e-16 84.3
MsaG010128 AT3G06400.3 24.695 328 178 6 397 723 210 469 8.38e-24 108
MsaG010128 AT3G06400.3 34.043 141 90 2 865 1004 507 645 3.27e-16 84.3
MsaG010128 AT3G57300.1 37.500 144 90 0 838 981 1196 1339 1.60e-23 108
MsaG010128 AT3G57300.1 26.149 348 171 11 396 723 606 887 5.60e-18 90.5
MsaG010128 AT3G57300.4 37.500 144 90 0 838 981 1196 1339 1.60e-23 108
MsaG010128 AT3G57300.4 26.149 348 171 11 396 723 606 887 5.60e-18 90.5
MsaG010128 AT3G57300.2 37.500 144 90 0 838 981 1229 1372 1.92e-23 108
MsaG010128 AT3G57300.2 29.439 214 125 6 520 723 723 920 1.43e-16 85.9
MsaG010128 AT5G18620.2 24.695 328 178 6 397 723 215 474 3.13e-23 107
MsaG010128 AT5G18620.2 34.043 141 90 2 865 1004 512 650 3.38e-16 84.3
MsaG010128 AT5G18620.1 24.695 328 178 6 397 723 215 474 3.35e-23 107
MsaG010128 AT5G18620.1 34.043 141 90 2 865 1004 512 650 3.90e-16 84.3
MsaG010128 AT3G06010.1 40.441 136 78 2 857 991 722 855 1.75e-22 104
MsaG010128 AT3G06010.1 26.136 352 165 12 397 729 424 699 6.91e-20 96.7
MsaG010128 AT2G18760.3 31.776 214 142 3 801 1013 742 952 2.75e-22 104
MsaG010128 AT2G18760.4 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT2G18760.1 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT2G18760.2 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT2G18760.7 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT2G18760.5 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT2G18760.6 31.776 214 142 3 801 1013 683 893 2.88e-22 104
MsaG010128 AT5G19310.2 38.971 136 80 2 857 991 440 573 6.75e-22 102
MsaG010128 AT5G19310.2 25.145 346 168 12 397 725 143 414 2.43e-17 87.8
MsaG010128 AT5G19310.1 38.971 136 80 2 857 991 704 837 9.73e-22 102
MsaG010128 AT5G19310.1 25.145 346 168 12 397 725 407 678 2.57e-17 88.2
MsaG010128 AT2G25170.1 31.214 173 114 3 842 1009 588 760 1.25e-21 102
MsaG010128 AT2G25170.1 23.353 334 194 10 398 724 295 573 2.46e-17 88.2
MsaG010128 AT2G25170.4 31.214 173 114 3 842 1009 588 760 1.25e-21 102
MsaG010128 AT2G25170.4 23.353 334 194 10 398 724 295 573 2.46e-17 88.2
MsaG010128 AT2G25170.2 31.214 173 114 3 842 1009 605 777 1.27e-21 102
MsaG010128 AT2G25170.2 23.353 334 194 10 398 724 312 590 2.14e-17 88.6
MsaG010128 AT2G25170.3 31.214 173 114 3 842 1009 614 786 1.38e-21 102
MsaG010128 AT2G25170.3 23.353 334 194 10 398 724 321 599 2.61e-17 88.2
MsaG010128 AT3G12810.2 35.338 133 86 0 849 981 1072 1204 1.44e-21 102
MsaG010128 AT3G12810.2 24.812 266 164 9 475 727 582 824 2.11e-16 85.5
MsaG010128 AT3G12810.1 35.338 133 86 0 849 981 1076 1208 1.47e-21 102
MsaG010128 AT3G12810.1 24.812 266 164 9 475 727 586 828 2.27e-16 85.5
MsaG010128 AT2G13370.1 24.932 365 174 13 398 739 647 934 1.54e-21 102
MsaG010128 AT2G13370.1 33.918 171 109 3 840 1008 931 1099 3.20e-18 91.3
MsaG010128 AT2G13370.2 24.932 365 174 13 398 739 647 934 1.54e-21 102
MsaG010128 AT2G13370.2 33.918 171 109 3 840 1008 931 1099 3.20e-18 91.3
MsaG010128 AT2G13370.3 24.932 365 174 13 398 739 647 934 1.54e-21 102
MsaG010128 AT2G13370.3 33.918 171 109 3 840 1008 931 1099 3.20e-18 91.3
MsaG010128 AT3G19210.3 35.556 180 107 5 844 1014 529 708 1.74e-21 101
MsaG010128 AT3G19210.1 35.556 180 107 5 844 1014 529 708 1.79e-21 101
MsaG010128 AT3G19210.2 35.556 180 107 5 844 1014 527 706 1.85e-21 101
MsaG010128 AT4G31900.2 37.063 143 89 1 847 988 482 624 2.68e-21 101
MsaG010128 AT4G31900.2 24.047 341 160 10 398 724 206 461 7.13e-18 90.1
MsaG010128 AT4G31900.3 37.063 143 89 1 847 988 523 665 2.70e-21 101
MsaG010128 AT4G31900.3 24.047 341 160 10 398 724 247 502 5.55e-18 90.5
MsaG010128 AT4G31900.1 37.063 143 89 1 847 988 523 665 2.71e-21 101
MsaG010128 AT4G31900.1 24.047 341 160 10 398 724 247 502 5.96e-18 90.1
MsaG010128 AT5G44800.1 33.333 165 107 2 847 1009 1003 1166 6.01e-21 100
MsaG010128 AT5G44800.1 24.519 208 124 5 523 724 802 982 1.82e-13 75.9
MsaG010128 AT2G44980.1 37.255 153 95 1 847 998 367 519 4.01e-20 97.1
MsaG010128 AT2G44980.1 26.336 262 165 7 475 723 102 348 1.16e-15 82.4
MsaG010128 AT1G03750.1 34.706 170 102 3 826 991 507 671 4.82e-20 96.7
MsaG010128 AT2G44980.3 34.969 163 95 2 847 998 375 537 9.53e-19 92.4
MsaG010128 AT2G44980.3 24.723 271 167 7 475 723 101 356 1.16e-14 79.3
MsaG010128 AT2G44980.2 34.969 163 95 2 847 998 376 538 9.79e-19 92.4
MsaG010128 AT2G44980.2 24.723 271 167 7 475 723 102 357 1.10e-14 79.3
MsaG010128 AT2G28290.5 25.524 286 173 10 475 744 805 1066 3.16e-18 91.7
MsaG010128 AT2G28290.5 33.129 163 103 2 857 1013 1083 1245 1.67e-17 89.4
MsaG010128 AT2G28290.1 25.524 286 173 10 475 744 804 1065 3.18e-18 91.7
MsaG010128 AT2G28290.1 33.129 163 103 2 857 1013 1082 1244 1.67e-17 89.4
MsaG010128 AT2G28290.3 25.660 265 161 8 475 723 804 1048 3.61e-18 91.3
MsaG010128 AT2G28290.3 33.129 163 103 2 857 1013 1082 1244 1.77e-17 89.0
MsaG010128 AT2G28290.4 25.660 265 161 8 475 723 804 1048 3.61e-18 91.3
MsaG010128 AT2G28290.4 33.129 163 103 2 857 1013 1082 1244 1.77e-17 89.0
MsaG010128 AT2G28290.6 25.660 265 161 8 475 723 805 1049 3.61e-18 91.3
MsaG010128 AT2G28290.6 33.129 163 103 2 857 1013 1083 1245 1.77e-17 89.0
MsaG010128 AT2G28290.2 25.660 265 161 8 475 723 804 1048 3.67e-18 91.3
MsaG010128 AT2G28290.2 33.129 163 103 2 857 1013 1082 1244 1.74e-17 89.0
MsaG010128 AT2G46020.2 37.594 133 80 3 839 968 1297 1429 5.14e-18 90.9
MsaG010128 AT2G46020.2 23.077 377 194 10 397 748 1002 1307 2.33e-12 72.4
MsaG010128 AT2G46020.3 37.594 133 80 3 839 968 1297 1429 5.14e-18 90.9
MsaG010128 AT2G46020.3 23.077 377 194 10 397 748 1002 1307 2.33e-12 72.4
MsaG010128 AT2G46020.4 37.594 133 80 3 839 968 1297 1429 5.14e-18 90.9
MsaG010128 AT2G46020.4 23.077 377 194 10 397 748 1002 1307 2.33e-12 72.4
MsaG010128 AT2G46020.5 37.594 133 80 3 839 968 1296 1428 5.27e-18 90.9
MsaG010128 AT2G46020.5 23.138 376 194 10 397 748 1002 1306 8.17e-13 73.6
MsaG010128 AT2G46020.1 37.594 133 80 3 839 968 1296 1428 5.27e-18 90.9
MsaG010128 AT2G46020.1 23.138 376 194 10 397 748 1002 1306 8.17e-13 73.6
MsaG010128 AT2G46020.6 37.594 133 80 3 839 968 1296 1428 5.27e-18 90.9
MsaG010128 AT2G46020.6 23.138 376 194 10 397 748 1002 1306 8.17e-13 73.6
MsaG010128 AT3G57300.3 26.149 348 171 11 396 723 606 887 6.90e-18 90.1
MsaG010128 AT1G08600.4 30.220 182 112 3 847 1013 1114 1295 3.60e-17 87.8
MsaG010128 AT1G08600.3 30.220 182 112 3 847 1013 1114 1295 3.60e-17 87.8
MsaG010128 AT1G08600.2 30.220 182 112 3 847 1013 1114 1295 3.60e-17 87.8
MsaG010128 AT1G08600.1 30.220 182 112 3 847 1013 1093 1274 3.67e-17 87.8
MsaG010128 AT1G48310.2 29.167 168 112 1 840 1000 458 625 1.29e-15 82.0
MsaG010128 AT1G48310.1 29.167 168 112 1 840 1000 453 620 1.40e-15 82.0
MsaG010128 AT1G48310.3 29.487 156 102 2 840 987 453 608 2.11e-15 81.3
MsaG010128 AT1G05490.1 33.987 153 93 3 846 991 1197 1348 2.76e-13 75.1
MsaG010128 AT3G24340.1 29.730 185 116 4 817 991 896 1076 1.25e-12 72.8
MsaG010128 AT5G07810.1 32.258 124 83 1 856 979 547 669 2.78e-12 71.6
MsaG010128 AT2G21450.2 29.870 154 103 1 843 991 622 775 4.60e-11 67.4
MsaG010128 AT2G21450.3 29.870 154 103 1 843 991 524 677 5.14e-11 67.4
MsaG010128 AT2G21450.1 29.870 154 103 1 843 991 615 768 5.48e-11 67.4

Find 276 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTACTACATATGGGATTT+TGG 0.163488 2:+69024471 MsaT010128.1:CDS
TTTATCAAAACCAGTAAATT+TGG 0.170569 2:-69024133 None:intergenic
GTAAATTTGGTTGTCTTCTT+TGG 0.189219 2:-69024120 None:intergenic
TTTCAAATTTCCGGCTAAAA+AGG 0.196918 2:+69022331 MsaT010128.1:CDS
CTTCACAATAAACCGTTTAA+TGG 0.223360 2:-69029913 None:intergenic
CTTTGGAACCTTTGAAAGAT+TGG 0.223371 2:-69024103 None:intergenic
CTGTCTTTATATGTTCATTA+TGG 0.238475 2:+69024400 MsaT010128.1:CDS
GAAGCGCGTGGAGTGGATTT+TGG 0.238562 2:-69022098 None:intergenic
CAAAGAATCTTACCGATTAA+AGG 0.242216 2:-69028216 None:intergenic
GACAATCGCTGGTGTCTTAC+TGG 0.248327 2:+69024731 MsaT010128.1:CDS
TTCACCTTCTGAAGCATTAC+AGG 0.251195 2:-69027663 None:intergenic
CTGGTTTATGTCCTGTTTGT+AGG 0.252039 2:+69027858 MsaT010128.1:CDS
CGCAAACAACGAATGATTTC+TGG 0.261165 2:+69030372 MsaT010128.1:CDS
AAGAAGACAACCAAATTTAC+TGG 0.265643 2:+69024123 MsaT010128.1:CDS
ACCGACAAACCACCAATCTT+TGG 0.279942 2:-69022243 None:intergenic
TTCTAAAAGCCAAGTTTCTA+TGG 0.286427 2:+69024688 MsaT010128.1:CDS
TCACTTCTCGTTGCCCATTC+AGG 0.303684 2:+69024000 MsaT010128.1:CDS
CCGTCTCCGGGTAAAGGTTT+TGG 0.304596 2:+69022365 MsaT010128.1:CDS
CCTGTGCTCACCGTCTTTGC+CGG 0.308950 2:+69027801 MsaT010128.1:CDS
CTCTCGATCTGTGCTATGTT+TGG 0.309968 2:-69026395 None:intergenic
TCAGGCCAAGCAATCGAAAC+AGG 0.310745 2:-69022968 None:intergenic
GATTGGTGGTTTGTCGGTTC+CGG 0.312627 2:+69022248 MsaT010128.1:CDS
GCATCATCAGGTTTCTCTTA+AGG 0.313332 2:+69022899 MsaT010128.1:CDS
ATTTCATTTGTTCGTCTTGA+TGG 0.314180 2:+69028794 MsaT010128.1:CDS
TCAAATGCTTCAAGACATAT+TGG 0.318026 2:-69027761 None:intergenic
GGTTTCTGTTTCGCCGTCTC+CGG 0.318375 2:+69022352 MsaT010128.1:CDS
TTAGCCAAGCGCTTCCTTAG+AGG 0.319117 2:+69027638 MsaT010128.1:CDS
AGATTGACATTGAGAAGAAT+TGG 0.326280 2:+69028078 MsaT010128.1:CDS
TACTAAATGCTCCGTCGAAT+TGG 0.327944 2:+69022217 MsaT010128.1:CDS
TCTGAGCTTCCTTCTCAAAA+TGG 0.338846 2:+69023344 MsaT010128.1:CDS
TTTGGAACCTTTGAAAGATT+GGG 0.340708 2:-69024102 None:intergenic
ATATGTCCTATGACTCTTCT+TGG 0.341099 2:+69024201 MsaT010128.1:CDS
GGCCCTATTCAAAAGATCTA+AGG 0.342393 2:+69026574 MsaT010128.1:CDS
GATCGGACGGTGGAGAGATT+GGG 0.343561 2:-69021963 None:intergenic
CCAGCCCTGTTTCGATTGCT+TGG 0.343641 2:+69022963 MsaT010128.1:CDS
ATTTCAGTGTCTTCATCAAT+AGG 0.347825 2:+69022862 MsaT010128.1:intron
ATTCTATAAATTTGTCAATC+AGG 0.356471 2:+69022693 MsaT010128.1:CDS
CAACATGATAGGCTTCAAAA+TGG 0.360508 2:-69026365 None:intergenic
TCTTGCAGATTCCCTTTAAT+CGG 0.360714 2:+69028204 MsaT010128.1:CDS
GGATCGGACGGTGGAGAGAT+TGG 0.364467 2:-69021964 None:intergenic
AACTTGCCAAGAGGCATTCC+CGG 0.367492 2:-69027820 None:intergenic
GAATAGAGCCTTGGGGTCAT+TGG 0.367752 2:+69025788 MsaT010128.1:CDS
CCCCTCCTCTGGCCATTTGA+AGG 0.368562 2:-69023839 None:intergenic
CCGCACCTCATTACAAGAAA+TGG 0.374734 2:-69026802 None:intergenic
GTCGGTTCCGGTGAAGTGGC+GGG 0.377358 2:+69022260 MsaT010128.1:CDS
CTTGAAAATCTTCGCTCATC+AGG 0.379572 2:+69028137 MsaT010128.1:CDS
TGGTGAGGGATAACAAGGTT+AGG 0.382555 2:+69022624 MsaT010128.1:CDS
TCAGGAAAGGGTGGATCATT+AGG 0.383354 2:+69024018 MsaT010128.1:CDS
TTAGCAGATGCTATGGGGCT+TGG 0.385374 2:+69023958 MsaT010128.1:CDS
GCGCGTGGGGTGACGGCGCG+TGG 0.389030 2:-69022155 None:intergenic
TGCATCAAGTTCAGAGTTAG+AGG 0.393701 2:+69023427 MsaT010128.1:CDS
CTTTCTGAGAATAGAGCCTT+GGG 0.394271 2:+69025780 MsaT010128.1:CDS
ACGGCGCGTGGGGTTGAATT+CGG 0.395856 2:-69022143 None:intergenic
CGCGTCCTTGCTCAACAAAC+TGG 0.397127 2:-69026717 None:intergenic
TTCTGCATTAGCGTTGCTCT+TGG 0.400995 2:-69022192 None:intergenic
AGCGCTTGGCTAATTTGTTT+AGG 0.401775 2:-69027628 None:intergenic
GTTTCGCCGTCTCCGGGTAA+AGG 0.401957 2:+69022359 MsaT010128.1:CDS
CATGTTTGTTAAGCATCATC+AGG 0.403980 2:+69022887 MsaT010128.1:CDS
AAAGAATCTTACCGATTAAA+GGG 0.405114 2:-69028215 None:intergenic
AGTTCACAGAGAAGATTTGC+AGG 0.416694 2:-69023551 None:intergenic
AAGCATTACAGGTTCCTCTA+AGG 0.421875 2:-69027652 None:intergenic
TTGACTAAAAGGACGCTTGT+TGG 0.423925 2:-69023213 None:intergenic
AATAGAGCCTTGGGGTCATT+GGG 0.424244 2:+69025789 MsaT010128.1:CDS
TTGGTTCTCCTCAACATGAT+AGG 0.426265 2:-69026376 None:intergenic
GATAACAAGGTTAGGGTTGA+AGG 0.431944 2:+69022632 MsaT010128.1:CDS
TTCTGGTGCCTTGACTGATC+AGG 0.432302 2:+69030389 MsaT010128.1:CDS
GTAGAGTCATGCAAGGTAAC+TGG 0.433208 2:+69028101 MsaT010128.1:CDS
CAAAGAAGGTGGCCATTAAA+CGG 0.435040 2:+69029901 MsaT010128.1:CDS
CTCGTTGCCCATTCAGGAAA+GGG 0.436565 2:+69024006 MsaT010128.1:CDS
CTGTGCTCACCGTCTTTGCC+GGG 0.436695 2:+69027802 MsaT010128.1:CDS
ATATGATTATTCACCTGGAT+TGG 0.438504 2:-69024758 None:intergenic
TGCATTAGCGTTGCTCTTGG+AGG 0.439119 2:-69022189 None:intergenic
TGATCCACCCTTTCCTGAAT+GGG 0.439899 2:-69024013 None:intergenic
ATGATCCACCCTTTCCTGAA+TGG 0.441893 2:-69024014 None:intergenic
CGCGTGGGGTGACGGCGCGT+GGG 0.444179 2:-69022154 None:intergenic
TCTTACTGGGACTCCAATCC+AGG 0.445915 2:+69024745 MsaT010128.1:CDS
GTTTCTGTTTCGCCGTCTCC+GGG 0.447709 2:+69022353 MsaT010128.1:CDS
TTTGATCTTGACAACATTGT+TGG 0.450349 2:+69023401 MsaT010128.1:CDS
AGAGCTACGTAAAGGGGAGC+AGG 0.452323 2:+69027730 MsaT010128.1:CDS
AGTTGGCGAAATTCTACCTC+TGG 0.455433 2:+69027839 MsaT010128.1:CDS
ACCTGAAAATACCTACAAAC+AGG 0.456454 2:-69027869 None:intergenic
GCGGGGTTGTCTACGTGTAA+AGG 0.456759 2:+69022278 MsaT010128.1:CDS
TTGTGGAAGAGCTACGTAAA+GGG 0.456775 2:+69027723 MsaT010128.1:CDS
TCCATGATGCCCAACACATT+AGG 0.457411 2:-69022671 None:intergenic
TGAACCTACAGAAGCTGAAA+AGG 0.460920 2:+69026541 MsaT010128.1:CDS
AAACATCGAGCCCATTCGTT+CGG 0.462410 2:-69022593 None:intergenic
TCCAAAGATTGGTGGTTTGT+CGG 0.464201 2:+69022242 MsaT010128.1:CDS
TATGTCCTATGACTCTTCTT+GGG 0.464439 2:+69024202 MsaT010128.1:CDS
CTATGACTCTTCTTGGGCAG+TGG 0.465483 2:+69024208 MsaT010128.1:CDS
GGCTCGATGTTTATTGCCAT+TGG 0.468336 2:+69022604 MsaT010128.1:CDS
GCTTTCTGAGAATAGAGCCT+TGG 0.474672 2:+69025779 MsaT010128.1:CDS
TCTTTGCCGGGAATGCCTCT+TGG 0.475465 2:+69027814 MsaT010128.1:CDS
TGTCGGTTCCGGTGAAGTGG+CGG 0.477280 2:+69022259 MsaT010128.1:CDS
GATTTCCATGTCGGTGACTT+CGG 0.477548 2:-69021997 None:intergenic
ACCGCTCAGTCATTTATTGA+AGG 0.478821 2:+69024051 MsaT010128.1:CDS
TTTCATTTGTTCGTCTTGAT+GGG 0.479475 2:+69028795 MsaT010128.1:CDS
GTGGACTCTTCTCAATTCGT+TGG 0.479777 2:+69024627 MsaT010128.1:CDS
CCAACAATCACCTTCTTGAA+AGG 0.480324 2:-69022993 None:intergenic
GATGTTGTAATTACTACATA+TGG 0.480922 2:+69024463 MsaT010128.1:CDS
CGGGGTTGTCTACGTGTAAA+GGG 0.481243 2:+69022279 MsaT010128.1:CDS
ATTTCCTAGCACCCTTCAAA+TGG 0.482239 2:+69023827 MsaT010128.1:CDS
CAGAGGCAGCCATAGAAACT+TGG 0.482882 2:-69024697 None:intergenic
GATTGACATTGAGAAGAATT+GGG 0.483033 2:+69028079 MsaT010128.1:CDS
ACAGCTTGTTCCTCAACAGC+TGG 0.484235 2:-69029852 None:intergenic
GGGGTCAGTGGAGCAGAGAA+TGG 0.485971 2:+69030335 MsaT010128.1:intron
AGCCTTGGGGTCATTGGGCC+TGG 0.487232 2:+69025794 MsaT010128.1:CDS
AGTGACAGCGCGTGGGGTGA+CGG 0.487841 2:-69022162 None:intergenic
CTTATTCAGAAACCATTTGA+GGG 0.488359 2:+69026310 MsaT010128.1:CDS
ACAATCGCTGGTGTCTTACT+GGG 0.491444 2:+69024732 MsaT010128.1:CDS
GTACAGAATGGAGAGAATAA+TGG 0.491848 2:+69024605 MsaT010128.1:intron
CTCAGAAGACAGCGACATAC+AGG 0.492057 2:+69028859 MsaT010128.1:CDS
CTCTAATTGCTGACAATCGC+TGG 0.493004 2:+69024720 MsaT010128.1:CDS
ATGTTTATTGCCATTGGTGA+GGG 0.493383 2:+69022610 MsaT010128.1:CDS
CAGGTTTGCAGCTACCTCAC+TGG 0.497542 2:-69024506 None:intergenic
CAACAACCCTTCATCCATGT+TGG 0.498328 2:+69023645 MsaT010128.1:CDS
CCGGCAAAGACGGTGAGCAC+AGG 0.498717 2:-69027801 None:intergenic
GGTGAGGGATAACAAGGTTA+GGG 0.498770 2:+69022625 MsaT010128.1:CDS
CTCTCATCACCACCCTCAAA+TGG 0.499145 2:-69026322 None:intergenic
ATGGGCAACGAGAAGTGATA+TGG 0.502263 2:-69023995 None:intergenic
ATCTTTGGATTCCAATTCGA+CGG 0.504069 2:-69022228 None:intergenic
AACAACCCTTCATCCATGTT+GGG 0.504758 2:+69023646 MsaT010128.1:CDS
ATGCCTCCCAACATGGATGA+AGG 0.505566 2:-69023652 None:intergenic
ACATATAAAGACAGAGTCCC+GGG 0.508440 2:-69024391 None:intergenic
TCACTTAAAGCTGGTGGAGT+TGG 0.508653 2:+69028996 MsaT010128.1:CDS
CCCTCCTCTGGCCATTTGAA+GGG 0.508941 2:-69023838 None:intergenic
CCAAGCAATCGAAACAGGGC+TGG 0.510364 2:-69022963 None:intergenic
TCGAATTGGAATCCAAAGAT+TGG 0.510387 2:+69022231 MsaT010128.1:CDS
GACATTGAATCTGCAGCAGC+GGG 0.510766 2:+69028817 MsaT010128.1:CDS
GAGGTGGCAGTGACAGCGCG+TGG 0.511647 2:-69022170 None:intergenic
CATTAAACGGTTTATTGTGA+AGG 0.511910 2:+69029914 MsaT010128.1:CDS
ATTAGCGTTGCTCTTGGAGG+TGG 0.512225 2:-69022186 None:intergenic
CACTGCCCAAGAAGAGTCAT+AGG 0.512330 2:-69024207 None:intergenic
TACAATTCCCAATCTTTCAA+AGG 0.513608 2:+69024095 MsaT010128.1:CDS
TTTGAAAATCACTTTCTCAC+CGG 0.515598 2:-69022315 None:intergenic
GCTTATTCAGAAACCATTTG+AGG 0.515987 2:+69026309 MsaT010128.1:CDS
GAATTTGCGCCTAATGTGTT+GGG 0.518901 2:+69022662 MsaT010128.1:CDS
AAAACAGGCTCTTCATTGGA+TGG 0.520951 2:+69023586 MsaT010128.1:CDS
CTGGCCATTTGAAGGGTGCT+AGG 0.522671 2:-69023831 None:intergenic
TCACCTTCTTGAAAGGGCTC+AGG 0.522689 2:-69022986 None:intergenic
TTGAGAAGGAAGCTCAGACT+TGG 0.524124 2:-69023339 None:intergenic
AGCTTATGTTCAAGAAGTTG+TGG 0.524660 2:+69027706 MsaT010128.1:CDS
AATTGGAATCCAAAGATTGG+TGG 0.525441 2:+69022234 MsaT010128.1:CDS
GTTCAGAGTGGTTCTTGATG+AGG 0.526345 2:+69024649 MsaT010128.1:CDS
CAACAATCACCTTCTTGAAA+GGG 0.526851 2:-69022992 None:intergenic
TGGCCTGAGCCCTTTCAAGA+AGG 0.526937 2:+69022983 MsaT010128.1:CDS
ACAGTAAATTATCTGCATAT+CGG 0.527419 2:-69026519 None:intergenic
GTTATGCGTATTCATCGCAT+TGG 0.528079 2:+69029873 MsaT010128.1:CDS
TAAATTATCTGCATATCGGC+AGG 0.529203 2:-69026515 None:intergenic
TAGGGTTTCAATGGGGAGCA+AGG 0.532336 2:+69021932 None:intergenic
TCGAAACTCATGTGCACCCC+GGG 0.533438 2:+69024374 MsaT010128.1:CDS
CAACAGCTGGATTCCACCAT+GGG 0.535347 2:-69029839 None:intergenic
CTGATGATGCTTAACAAACA+TGG 0.535778 2:-69022886 None:intergenic
AGACAACCCCGCCACTTCAC+CGG 0.538264 2:-69022267 None:intergenic
TTTGACCAGTTTGTTGAGCA+AGG 0.541603 2:+69026712 MsaT010128.1:CDS
TTGTTGATGTCACTTAAAGC+TGG 0.542586 2:+69028987 MsaT010128.1:CDS
ACCATCCATTTCTTGTAATG+AGG 0.542651 2:+69026797 MsaT010128.1:CDS
TGGTAGAATACCGAACGAAT+GGG 0.546942 2:+69022583 MsaT010128.1:CDS
TTTCACATTGCAGGGGTCAG+TGG 0.547487 2:+69030323 MsaT010128.1:intron
GTTTGTCGGTTCCGGTGAAG+TGG 0.548593 2:+69022256 MsaT010128.1:CDS
GCAGGAGGGAGAACTAGTAT+AGG 0.549371 2:-69026497 None:intergenic
TTGGTAGAATACCGAACGAA+TGG 0.549777 2:+69022582 MsaT010128.1:CDS
GGGAATGCCTCTTGGCAAGT+TGG 0.550093 2:+69027822 MsaT010128.1:CDS
GATGTTTATTGCCATTGGTG+AGG 0.551400 2:+69022609 MsaT010128.1:CDS
AGGAGAAACTCGTTGAGTGT+TGG 0.552237 2:-69022120 None:intergenic
CCCTTCAAATGGCCAGAGGA+GGG 0.553037 2:+69023838 MsaT010128.1:CDS
GACTCTTCTTGGGCAGTGGA+AGG 0.553194 2:+69024212 MsaT010128.1:CDS
GCGTGGGGTGACGGCGCGTG+GGG 0.553629 2:-69022153 None:intergenic
GCCTAATGTGTTGGGCATCA+TGG 0.554412 2:+69022670 MsaT010128.1:CDS
CTTCGGAACCGACGATGGAT+CGG 0.555285 2:-69021980 None:intergenic
TCTCGTTGCCCATTCAGGAA+AGG 0.555442 2:+69024005 MsaT010128.1:CDS
AATCGAAACAGGGCTGGAAG+AGG 0.555513 2:-69022957 None:intergenic
GTTGTGGAAGAGCTACGTAA+AGG 0.557368 2:+69027722 MsaT010128.1:CDS
AGGTGGCAGTGACAGCGCGT+GGG 0.558273 2:-69022169 None:intergenic
AGTGTCGAAGATGATGTTGA+TGG 0.558897 2:-69022060 None:intergenic
AACATATAAAGACAGAGTCC+CGG 0.560679 2:-69024392 None:intergenic
AGTTCGATCTGCACGGATCG+AGG 0.560912 2:+69030413 MsaT010128.1:CDS
GGTTCCTCTAAGGAAGCGCT+TGG 0.561540 2:-69027642 None:intergenic
CTCAATTCGTTGGTTCAGAG+TGG 0.562534 2:+69024637 MsaT010128.1:CDS
TTCTAATGAACAAGATTGGG+AGG 0.562586 2:+69022424 MsaT010128.1:CDS
GGCTCTGATGATTTCCATGT+CGG 0.562878 2:-69022006 None:intergenic
GAGAAGTGATATGGTCATGA+TGG 0.563878 2:-69023986 None:intergenic
ACCTACCATGACAAAAGCAT+TGG 0.565429 2:-69029039 None:intergenic
AGAGGCATTCCCGGCAAAGA+CGG 0.565652 2:-69027811 None:intergenic
ATGTTGTAATTACTACATAT+GGG 0.565829 2:+69024464 MsaT010128.1:CDS
GTCAATCTGAAATCGACTCT+CGG 0.566009 2:-69028063 None:intergenic
TGAATTTGCGCCTAATGTGT+TGG 0.566537 2:+69022661 MsaT010128.1:CDS
GCCATTGGTGAGGGATAACA+AGG 0.567472 2:+69022619 MsaT010128.1:CDS
TCGGTTCCGGTGAAGTGGCG+GGG 0.568102 2:+69022261 MsaT010128.1:CDS
CGGCAAAGACGGTGAGCACA+GGG 0.569809 2:-69027800 None:intergenic
TTGGATGGTTCAGATGGAGA+AGG 0.572645 2:+69023601 MsaT010128.1:CDS
ACCCTTCAAATGGCCAGAGG+AGG 0.577490 2:+69023837 MsaT010128.1:CDS
GGTGGCAGTGACAGCGCGTG+GGG 0.577560 2:-69022168 None:intergenic
TTGTTGGAATAGAAATCGCC+AGG 0.583507 2:-69023197 None:intergenic
ATAACAAGGTTAGGGTTGAA+GGG 0.583795 2:+69022633 MsaT010128.1:CDS
TCTGAAATCGACTCTCGGTA+GGG 0.583886 2:-69028058 None:intergenic
CAGGAAAACAGTCAGCAAGC+AGG 0.584456 2:+69028022 MsaT010128.1:intron
CCTTCAAATGGCCAGAGGAG+GGG 0.585735 2:+69023839 MsaT010128.1:CDS
TCTTCATTGGATGGTTCAGA+TGG 0.586280 2:+69023595 MsaT010128.1:CDS
AATCATCAGAGCCCTACACT+TGG 0.589906 2:+69022016 MsaT010128.1:CDS
GGTCTAGAAAAGCAGTCCAC+TGG 0.591668 2:-69028181 None:intergenic
TTGATGTCACTTAAAGCTGG+TGG 0.591987 2:+69028990 MsaT010128.1:CDS
AAGCGATATGCCTCCCAACA+TGG 0.592271 2:-69023659 None:intergenic
GAGCTACGTAAAGGGGAGCA+GGG 0.594358 2:+69027731 MsaT010128.1:CDS
ATGTTCATTATGGACAAGGT+AGG 0.594483 2:+69024410 MsaT010128.1:CDS
ATGTTGGGAGGCATATCGCT+TGG 0.594664 2:+69023661 MsaT010128.1:CDS
AGGATGAAACACTGATTCAT+CGG 0.598444 2:-69022937 None:intergenic
CTGAAATCGACTCTCGGTAG+GGG 0.598573 2:-69028057 None:intergenic
GATGGAGAAGGGACATGCAA+GGG 0.598779 2:+69023613 MsaT010128.1:CDS
TCCACCGTCCGATCCATCGT+CGG 0.598781 2:+69021972 MsaT010128.1:CDS
TCAATAAATGACTGAGCGGT+AGG 0.598848 2:-69024048 None:intergenic
CGGTTCCGAAGTCACCGACA+TGG 0.598997 2:+69021992 MsaT010128.1:CDS
GCTCAGTCATTTATTGAAGG+TGG 0.599635 2:+69024054 MsaT010128.1:CDS
TCAACAGCTGGATTCCACCA+TGG 0.600560 2:-69029840 None:intergenic
TACCAGGCCCAATGACCCCA+AGG 0.600717 2:-69025796 None:intergenic
ATCGGACGGTGGAGAGATTG+GGG 0.602185 2:-69021962 None:intergenic
TTTGAGGGTGGTGATGAGAG+AGG 0.603282 2:+69026325 MsaT010128.1:CDS
ATGGTGGAATCCAGCTGTTG+AGG 0.604665 2:+69029842 MsaT010128.1:CDS
AAAGGGAGGAGTATAAAATC+CGG 0.604938 2:+69022296 MsaT010128.1:CDS
ATCAGGAAGTTCGATCTGCA+CGG 0.605237 2:+69030406 MsaT010128.1:CDS
AGATGGAGAAGGGACATGCA+AGG 0.606629 2:+69023612 MsaT010128.1:CDS
TCGCATTGGACAAACAAAGA+AGG 0.607156 2:+69029887 MsaT010128.1:CDS
GTTCACAGAGAAGATTTGCA+GGG 0.608046 2:-69023550 None:intergenic
TGCCTCCCAACATGGATGAA+GGG 0.608221 2:-69023651 None:intergenic
ATCTGAAATCGACTCTCGGT+AGG 0.609293 2:-69028059 None:intergenic
CGTTGAGTGTTGGAAGCGCG+TGG 0.610617 2:-69022110 None:intergenic
AGTGTTGGAAGCGCGTGGAG+TGG 0.611950 2:-69022105 None:intergenic
ATTGTCAGCAATTAGAGCAG+AGG 0.614540 2:-69024714 None:intergenic
TGGATGGTTCAGATGGAGAA+GGG 0.615283 2:+69023602 MsaT010128.1:CDS
ATCGAAACTCATGTGCACCC+CGG 0.617199 2:+69024373 MsaT010128.1:CDS
TGTGGAAGAGCTACGTAAAG+GGG 0.617296 2:+69027724 MsaT010128.1:CDS
TTATATGTTCATTATGGACA+AGG 0.620069 2:+69024406 MsaT010128.1:CDS
GGAACCTGTAATGCTTCAGA+AGG 0.620135 2:+69027659 MsaT010128.1:CDS
CTTTCTACAGAACAACCTTG+AGG 0.622629 2:+69025738 MsaT010128.1:intron
GGTGCTAGGAAATTCTGTTG+TGG 0.622944 2:-69023817 None:intergenic
GCTCGACCAAAACCTTTACC+CGG 0.623062 2:-69022371 None:intergenic
CCAAAACCTTTACCCGGAGA+CGG 0.625381 2:-69022365 None:intergenic
GGACATTGAATCTGCAGCAG+CGG 0.627204 2:+69028816 MsaT010128.1:CDS
TCGAACTTCCTGATCAGTCA+AGG 0.630169 2:-69030397 None:intergenic
ACCTTGTTATCCCTCACCAA+TGG 0.631772 2:-69022620 None:intergenic
GACGGTGGAGAGATTGGGGT+CGG 0.633390 2:-69021958 None:intergenic
GTCAATGTGAATAGGACCCA+TGG 0.633640 2:+69029823 MsaT010128.1:intron
CAGAATGGAGAGAATAATGG+TGG 0.634132 2:+69024608 MsaT010128.1:intron
GGTGACTTCGGAACCGACGA+TGG 0.636416 2:-69021985 None:intergenic
CAAACATAGCACAGATCGAG+AGG 0.636766 2:+69026396 MsaT010128.1:CDS
ATTCAGAAACCATTTGAGGG+TGG 0.638702 2:+69026313 MsaT010128.1:CDS
GTCAGTGGAGCAGAGAATGG+AGG 0.638748 2:+69030338 MsaT010128.1:CDS
GCGCGTGGGGTTGAATTCGG+AGG 0.639011 2:-69022140 None:intergenic
CAGGCCAAGCAATCGAAACA+GGG 0.639289 2:-69022967 None:intergenic
AGACTTGGCATGTAGTAATG+TGG 0.640007 2:-69023324 None:intergenic
AACACTTCTCTAACAAGCGG+TGG 0.641009 2:+69024168 MsaT010128.1:CDS
AACCCTTCATCCATGTTGGG+AGG 0.641165 2:+69023649 MsaT010128.1:CDS
TTCACAGAGAAGATTTGCAG+GGG 0.644144 2:-69023549 None:intergenic
AATTTCGCCAACTTGCCAAG+AGG 0.649305 2:-69027829 None:intergenic
GTTGCCCATTCAGGAAAGGG+TGG 0.651642 2:+69024009 MsaT010128.1:CDS
ACCGACGATGGATCGGACGG+TGG 0.653201 2:-69021973 None:intergenic
ATTATCTGCATATCGGCAGG+AGG 0.654938 2:-69026512 None:intergenic
GAAGACTGTAAACATCCTCA+AGG 0.655753 2:-69025753 None:intergenic
AAGGCTCTATTCTCAGAAAG+CGG 0.656097 2:-69025777 None:intergenic
ACCTCATTACAAGAAATGGA+TGG 0.659149 2:-69026798 None:intergenic
GGAACCGACGATGGATCGGA+CGG 0.660670 2:-69021976 None:intergenic
TCACAGAGAAGATTTGCAGG+GGG 0.667220 2:-69023548 None:intergenic
TTATCTGCATATCGGCAGGA+GGG 0.668059 2:-69026511 None:intergenic
CATTGGACAAACAAAGAAGG+TGG 0.670257 2:+69029890 MsaT010128.1:CDS
GATTAAAGGGAATCTGCAAG+AGG 0.672105 2:-69028202 None:intergenic
AGCACCCTTCAAATGGCCAG+AGG 0.672761 2:+69023834 MsaT010128.1:CDS
CACAGAGAAGATTTGCAGGG+GGG 0.683685 2:-69023547 None:intergenic
AAACATAGCACAGATCGAGA+GGG 0.687757 2:+69026397 MsaT010128.1:CDS
TGGTAACGAGAATGAAGACG+AGG 0.693438 2:+69023364 MsaT010128.1:CDS
GAATTGGGTAGAGTCATGCA+AGG 0.694776 2:+69028094 MsaT010128.1:CDS
GGTTGTCTACGTGTAAAGGG+AGG 0.702868 2:+69022282 MsaT010128.1:CDS
ACCTTCAATAAATGACTGAG+CGG 0.709846 2:-69024052 None:intergenic
GTCGAAGATGATGTTGATGG+CGG 0.713009 2:-69022057 None:intergenic
AATGTGAATAGGACCCATGG+TGG 0.733656 2:+69029826 MsaT010128.1:intron
ACAAACAGGACATAAACCAG+AGG 0.734717 2:-69027855 None:intergenic
CATATAAAGACAGAGTCCCG+GGG 0.754903 2:-69024390 None:intergenic
TTTCTGAGAATAGAGCCTTG+GGG 0.771746 2:+69025781 MsaT010128.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 69021942 69030458 69021942 ID=MsaG010128
Chr2 mRNA 69021942 69030458 69021942 ID=MsaT010128.1;Parent=MsaG010128
Chr2 exon 69021942 69022445 69021942 ID=MsaT010128.1.exon1;Parent=MsaT010128.1
Chr2 CDS 69021942 69022445 69021942 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69022581 69022714 69022581 ID=MsaT010128.1.exon2;Parent=MsaT010128.1
Chr2 CDS 69022581 69022714 69022581 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69022869 69023004 69022869 ID=MsaT010128.1.exon3;Parent=MsaT010128.1
Chr2 CDS 69022869 69023004 69022869 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69023185 69023238 69023185 ID=MsaT010128.1.exon4;Parent=MsaT010128.1
Chr2 CDS 69023185 69023238 69023185 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69023323 69023448 69023323 ID=MsaT010128.1.exon5;Parent=MsaT010128.1
Chr2 CDS 69023323 69023448 69023323 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69023539 69023690 69023539 ID=MsaT010128.1.exon6;Parent=MsaT010128.1
Chr2 CDS 69023539 69023690 69023539 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69023776 69023860 69023776 ID=MsaT010128.1.exon7;Parent=MsaT010128.1
Chr2 CDS 69023776 69023860 69023776 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69023955 69024233 69023955 ID=MsaT010128.1.exon8;Parent=MsaT010128.1
Chr2 CDS 69023955 69024233 69023955 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69024367 69024513 69024367 ID=MsaT010128.1.exon9;Parent=MsaT010128.1
Chr2 CDS 69024367 69024513 69024367 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69024611 69024766 69024611 ID=MsaT010128.1.exon10;Parent=MsaT010128.1
Chr2 CDS 69024611 69024766 69024611 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69025748 69025815 69025748 ID=MsaT010128.1.exon11;Parent=MsaT010128.1
Chr2 CDS 69025748 69025815 69025748 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69026300 69026422 69026300 ID=MsaT010128.1.exon12;Parent=MsaT010128.1
Chr2 CDS 69026300 69026422 69026300 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69026496 69026595 69026496 ID=MsaT010128.1.exon13;Parent=MsaT010128.1
Chr2 CDS 69026496 69026595 69026496 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69026706 69026818 69026706 ID=MsaT010128.1.exon14;Parent=MsaT010128.1
Chr2 CDS 69026706 69026818 69026706 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69027601 69027879 69027601 ID=MsaT010128.1.exon15;Parent=MsaT010128.1
Chr2 CDS 69027601 69027879 69027601 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69028025 69028225 69028025 ID=MsaT010128.1.exon16;Parent=MsaT010128.1
Chr2 CDS 69028025 69028225 69028025 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69028787 69028880 69028787 ID=MsaT010128.1.exon17;Parent=MsaT010128.1
Chr2 CDS 69028787 69028880 69028787 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69028984 69029055 69028984 ID=MsaT010128.1.exon18;Parent=MsaT010128.1
Chr2 CDS 69028984 69029055 69028984 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69029837 69029935 69029837 ID=MsaT010128.1.exon19;Parent=MsaT010128.1
Chr2 CDS 69029837 69029935 69029837 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Chr2 exon 69030336 69030458 69030336 ID=MsaT010128.1.exon20;Parent=MsaT010128.1
Chr2 CDS 69030336 69030458 69030336 ID=cds.MsaT010128.1;Parent=MsaT010128.1
Gene Sequence

>MsaT010128.1

ATGGGGAGCAAGGTCACCGACCCCAATCTCTCCACCGTCCGATCCATCGTCGGTTCCGAAGTCACCGACATGGAAATCATCAGAGCCCTACACTTGGCCAAAAATGACGTCACTGCCGCCATCAACATCATCTTCGACACTCAACGAGTTTCTCCTCCAAAATCCACTCCACGCGCTTCCAACACTCAACGAGTTTCTCCTCCGAATTCAACCCCACGCGCCGTCACCCCACGCGCTGTCACTGCCACCTCCAAGAGCAACGCTAATGCAGAAAATACTAAATGCTCCGTCGAATTGGAATCCAAAGATTGGTGGTTTGTCGGTTCCGGTGAAGTGGCGGGGTTGTCTACGTGTAAAGGGAGGAGTATAAAATCCGGTGAGAAAGTGATTTTCAAATTTCCGGCTAAAAAGGTTTCTGTTTCGCCGTCTCCGGGTAAAGGTTTTGGTCGAGCAGCAACAACTTGTTCTGAGATAGTGAGATTTTCTAATGAACAAGATTGGGAGATTGGTAGAATACCGAACGAATGGGCTCGATGTTTATTGCCATTGGTGAGGGATAACAAGGTTAGGGTTGAAGGGAAATGTGAATTTGCGCCTAATGTGTTGGGCATCATGGATTCTATAAATTTGTCAATCAGTGTCTTCATCAATAGGTCCATGTTTGTTAAGCATCATCAGGTTTCTCTTAAGGATGCTACGAATTCGACCGATGAATCAGTGTTTCATCCTCTTCCAGCCCTGTTTCGATTGCTTGGCCTGAGCCCTTTCAAGAAGGCAGAGTTAACTCCTGGCGATTTCTATTCCAACAAGCGTCCTTTTAGTCAAACGGCCACATTACTACATGCCAAGTCTGAGCTTCCTTCTCAAAATGGTAACGAGAATGAAGACGAGGATTCTGTTTCTGAATTTGATCTTGACAACATTGTTGGTGTTGCATCAAGTTCAGAGTTAGAGGAAATGGACCCCCCTGCAAATCTTCTCTGTGAACTGCGACCCTATCAAAAACAGGCTCTTCATTGGATGGTTCAGATGGAGAAGGGACATGCAAGGGATGAGACTGCAACAACCCTTCATCCATGTTGGGAGGCATATCGCTTGGCTGACAAGAGGGAGCTTGTCGTTTATTTGAATGCATTTTCTGGTGAAGCCACAACAGAATTTCCTAGCACCCTTCAAATGGCCAGAGGAGGGATTTTAGCAGATGCTATGGGGCTTGGAAAGACCATCATGACCATATCACTTCTCGTTGCCCATTCAGGAAAGGGTGGATCATTAGGCAGTCAACCTACCGCTCAGTCATTTATTGAAGGTGGTGAAGTTAGTGACACTGATACAATTCCCAATCTTTCAAAGGTTCCAAAGAAGACAACCAAATTTACTGGTTTTGATAAATCGACGAAGAAAAACACTTCTCTAACAAGCGGTGGCAACTTGATAATATGTCCTATGACTCTTCTTGGGCAGTGGAAGGCAGAGATCGAAACTCATGTGCACCCCGGGACTCTGTCTTTATATGTTCATTATGGACAAGGTAGGCCCAAAGATGCAAAAAGTCTAGCTCAATGTGATGTTGTAATTACTACATATGGGATTTTGGCCTCCGATTTTTCCAGTGAGAATGGAGAGAATAATGGTGGACTCTTCTCAATTCGTTGGTTCAGAGTGGTTCTTGATGAGGCACATACTATAAAATCTTCTAAAAGCCAAGTTTCTATGGCTGCCTCTGCTCTAATTGCTGACAATCGCTGGTGTCTTACTGGGACTCCAATCCAGAACAACCTTGAGGATGTTTACAGTCTTCTCCGCTTTCTGAGAATAGAGCCTTGGGGTCATTGGGCCTGGTGGAACAAGCTTATTCAGAAACCATTTGAGGGTGGTGATGAGAGAGGATTGAAATTAGTTCAGTCCATTTTGAAGCCTATCATGTTGAGGAGAACCAAACATAGCACAGATCGAGAGGGAAAGCCTATACTAGTTCTCCCTCCTGCCGATATGCAGATAATTTACTGTGAACCTACAGAAGCTGAAAAGGACTTTTATGAGGCCCTATTCAAAAGATCTAAGGTAAAATTTGACCAGTTTGTTGAGCAAGGACGCGTTCTTCATAATTATGCTTCAATACTAGAGCTGCTTTTACGTCTTCGGCAATGTTGTGACCATCCATTTCTTGTAATGAGTCGTGGTGATACTCAAGAATTTGCTGACCTAAACAAATTAGCCAAGCGCTTCCTTAGAGGAACCTGTAATGCTTCAGAAGGTGAAGTAAAAGATGCACTCTCACGAGCTTATGTTCAAGAAGTTGTGGAAGAGCTACGTAAAGGGGAGCAGGGAGAGTGTCCAATATGTCTTGAAGCATTTGAAGATTCAGTGTTGACGCCCTGTGCTCACCGTCTTTGCCGGGAATGCCTCTTGGCAAGTTGGCGAAATTCTACCTCTGGTTTATGTCCTGTTTGTAGGAAAACAGTCAGCAAGCAGGATCTTATCACTGCCCCTACCGAGAGTCGATTTCAGATTGACATTGAGAAGAATTGGGTAGAGTCATGCAAGGTAACTGGTCTTATGAATGAACTTGAAAATCTTCGCTCATCAGGATCTAAGAGCATTGTTTTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTAATCGGAATAACATTTCATTTGTTCGTCTTGATGGGACATTGAATCTGCAGCAGCGGGAAAAAGTAATCAAACAATTCTCAGAAGACAGCGACATACAGGTGTTGTTGATGTCACTTAAAGCTGGTGGAGTTGGTATAAATCTAACAGCAGCTTCCAATGCTTTTGTCATGGACCCATGGTGGAATCCAGCTGTTGAGGAACAAGCTGTTATGCGTATTCATCGCATTGGACAAACAAAGAAGGTGGCCATTAAACGGTTTATTGTGAAGGGGTCAGTGGAGCAGAGAATGGAGGCAGTGCAAGCACGCAAACAACGAATGATTTCTGGTGCCTTGACTGATCAGGAAGTTCGATCTGCACGGATCGAGGAGTTGAAGATGCTCTTTACTTAG
Protein sequence

>MsaT010128.1

MGSKVTDPNLSTVRSIVGSEVTDMEIIRALHLAKNDVTAAINIIFDTQRVSPPKSTPRASNTQRVSPPNSTPRAVTPRAVTATSKSNANAENTKCSVELESKDWWFVGSGEVAGLSTCKGRSIKSGEKVIFKFPAKKVSVSPSPGKGFGRAATTCSEIVRFSNEQDWEIGRIPNEWARCLLPLVRDNKVRVEGKCEFAPNVLGIMDSINLSISVFINRSMFVKHHQVSLKDATNSTDESVFHPLPALFRLLGLSPFKKAELTPGDFYSNKRPFSQTATLLHAKSELPSQNGNENEDEDSVSEFDLDNIVGVASSSELEEMDPPANLLCELRPYQKQALHWMVQMEKGHARDETATTLHPCWEAYRLADKRELVVYLNAFSGEATTEFPSTLQMARGGILADAMGLGKTIMTISLLVAHSGKGGSLGSQPTAQSFIEGGEVSDTDTIPNLSKVPKKTTKFTGFDKSTKKNTSLTSGGNLIICPMTLLGQWKAEIETHVHPGTLSLYVHYGQGRPKDAKSLAQCDVVITTYGILASDFSSENGENNGGLFSIRWFRVVLDEAHTIKSSKSQVSMAASALIADNRWCLTGTPIQNNLEDVYSLLRFLRIEPWGHWAWWNKLIQKPFEGGDERGLKLVQSILKPIMLRRTKHSTDREGKPILVLPPADMQIIYCEPTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALSRAYVQEVVEELRKGEQGECPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVCRKTVSKQDLITAPTESRFQIDIEKNWVESCKVTGLMNELENLRSSGSKSIVFSQWTAFLDLLQIPFNRNNISFVRLDGTLNLQQREKVIKQFSEDSDIQVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIKRFIVKGSVEQRMEAVQARKQRMISGALTDQEVRSARIEELKMLFT*