Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010188 | XP_003596817.1 | 98.718 | 390 | 3 | 2 | 1 | 389 | 1 | 389 | 0.0 | 784 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010188 | sp|Q9SQQ9|PHL9_ARATH | 54.745 | 411 | 144 | 12 | 2 | 389 | 3 | 394 | 3.23e-129 | 379 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010188 | tr|G7ITS9|G7ITS9_MEDTR | 98.718 | 390 | 3 | 2 | 1 | 389 | 1 | 389 | 0.0 | 784 |
Gene ID | Type | Classification |
---|---|---|
MsaG010188 | TF | GARP-G2-like |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010188 | MtrunA17_Chr2g0321461 | 98.718 | 390 | 3 | 2 | 1 | 389 | 1 | 389 | 0.0 | 784 |
MsaG010188 | MtrunA17_Chr6g0461641 | 49.254 | 402 | 114 | 12 | 38 | 389 | 35 | 396 | 6.24e-105 | 315 |
MsaG010188 | MtrunA17_Chr5g0417521 | 52.941 | 204 | 87 | 1 | 38 | 241 | 8 | 202 | 3.95e-67 | 216 |
MsaG010188 | MtrunA17_Chr4g0042451 | 53.623 | 207 | 82 | 4 | 38 | 241 | 10 | 205 | 3.40e-63 | 206 |
MsaG010188 | MtrunA17_Chr5g0409731 | 50.802 | 187 | 81 | 4 | 38 | 224 | 18 | 193 | 1.40e-51 | 174 |
MsaG010188 | MtrunA17_Chr8g0356501 | 52.632 | 171 | 63 | 3 | 35 | 205 | 27 | 179 | 3.38e-50 | 172 |
MsaG010188 | MtrunA17_Chr2g0310011 | 57.051 | 156 | 47 | 5 | 35 | 189 | 25 | 161 | 3.74e-47 | 164 |
MsaG010188 | MtrunA17_Chr7g0254981 | 44.670 | 197 | 86 | 5 | 44 | 237 | 49 | 225 | 1.08e-42 | 150 |
MsaG010188 | MtrunA17_Chr2g0290991 | 40.079 | 252 | 123 | 9 | 27 | 261 | 19 | 259 | 7.99e-41 | 146 |
MsaG010188 | MtrunA17_Chr2g0291021 | 46.023 | 176 | 72 | 3 | 27 | 200 | 31 | 185 | 1.98e-40 | 145 |
MsaG010188 | MtrunA17_Chr7g0261911 | 45.251 | 179 | 72 | 4 | 21 | 194 | 233 | 390 | 2.19e-39 | 146 |
MsaG010188 | MtrunA17_Chr1g0175091 | 43.850 | 187 | 73 | 5 | 27 | 204 | 236 | 399 | 8.02e-38 | 141 |
MsaG010188 | MtrunA17_Chr1g0197171 | 39.048 | 210 | 115 | 4 | 12 | 221 | 11 | 207 | 1.83e-37 | 137 |
MsaG010188 | MtrunA17_Chr1g0190301 | 43.293 | 164 | 72 | 2 | 31 | 194 | 161 | 303 | 1.20e-36 | 137 |
MsaG010188 | MtrunA17_Chr7g0258551 | 43.871 | 155 | 65 | 3 | 44 | 198 | 211 | 343 | 1.05e-34 | 132 |
MsaG010188 | MtrunA17_Chr7g0274471 | 43.590 | 156 | 66 | 3 | 45 | 200 | 218 | 351 | 4.51e-34 | 131 |
MsaG010188 | MtrunA17_Chr7g0242521 | 44.000 | 150 | 59 | 5 | 45 | 191 | 13 | 140 | 1.68e-28 | 111 |
MsaG010188 | MtrunA17_Chr1g0175071 | 38.372 | 172 | 84 | 6 | 33 | 204 | 165 | 314 | 2.91e-25 | 104 |
MsaG010188 | MtrunA17_Chr1g0175081 | 52.381 | 63 | 30 | 0 | 41 | 103 | 18 | 80 | 9.76e-20 | 83.6 |
MsaG010188 | MtrunA17_Chr7g0243081 | 62.500 | 56 | 21 | 0 | 46 | 101 | 72 | 127 | 2.16e-18 | 85.5 |
MsaG010188 | MtrunA17_Chr2g0288601 | 64.000 | 50 | 18 | 0 | 46 | 95 | 72 | 121 | 5.52e-17 | 77.0 |
MsaG010188 | MtrunA17_Chr2g0320231 | 52.778 | 72 | 32 | 1 | 30 | 101 | 84 | 153 | 9.53e-17 | 81.3 |
MsaG010188 | MtrunA17_Chr8g0379121 | 58.929 | 56 | 23 | 0 | 46 | 101 | 112 | 167 | 2.36e-16 | 80.1 |
MsaG010188 | MtrunA17_Chr3g0095611 | 50.794 | 63 | 28 | 1 | 45 | 107 | 19 | 78 | 3.49e-16 | 77.0 |
MsaG010188 | MtrunA17_Chr1g0210911 | 62.264 | 53 | 20 | 0 | 46 | 98 | 23 | 75 | 4.02e-16 | 79.0 |
MsaG010188 | MtrunA17_Chr1g0162931 | 60.377 | 53 | 21 | 0 | 46 | 98 | 19 | 71 | 5.87e-16 | 77.4 |
MsaG010188 | MtrunA17_Chr6g0479431 | 53.125 | 64 | 30 | 0 | 46 | 109 | 203 | 266 | 1.17e-15 | 77.8 |
MsaG010188 | MtrunA17_Chr4g0009901 | 52.174 | 69 | 31 | 2 | 32 | 99 | 154 | 221 | 1.38e-15 | 76.3 |
MsaG010188 | MtrunA17_Chr5g0410741 | 58.929 | 56 | 23 | 0 | 46 | 101 | 220 | 275 | 4.86e-15 | 76.3 |
MsaG010188 | MtrunA17_Chr3g0109981 | 52.308 | 65 | 31 | 0 | 46 | 110 | 275 | 339 | 6.95e-15 | 75.9 |
MsaG010188 | MtrunA17_Chr4g0009981 | 59.259 | 54 | 21 | 1 | 45 | 98 | 116 | 168 | 1.13e-14 | 73.6 |
MsaG010188 | MtrunA17_Chr1g0154261 | 44.318 | 88 | 42 | 2 | 46 | 126 | 127 | 214 | 1.89e-14 | 73.6 |
MsaG010188 | MtrunA17_Chr2g0294911 | 55.932 | 59 | 25 | 1 | 41 | 99 | 207 | 264 | 4.34e-14 | 73.9 |
MsaG010188 | MtrunA17_Chr8g0366281 | 57.143 | 56 | 24 | 0 | 46 | 101 | 174 | 229 | 4.46e-14 | 72.8 |
MsaG010188 | MtrunA17_Chr2g0304841 | 54.237 | 59 | 26 | 1 | 41 | 99 | 209 | 266 | 9.35e-14 | 72.8 |
MsaG010188 | MtrunA17_Chr4g0067981 | 55.932 | 59 | 25 | 1 | 41 | 99 | 211 | 268 | 1.28e-13 | 72.4 |
MsaG010188 | MtrunA17_Chr2g0283951 | 58.000 | 50 | 21 | 0 | 46 | 95 | 90 | 139 | 1.28e-13 | 71.6 |
MsaG010188 | MtrunA17_Chr7g0258531 | 33.333 | 147 | 76 | 3 | 44 | 189 | 212 | 337 | 2.02e-13 | 70.9 |
MsaG010188 | MtrunA17_Chr1g0161431 | 52.542 | 59 | 27 | 1 | 41 | 99 | 196 | 253 | 2.66e-13 | 71.6 |
MsaG010188 | MtrunA17_Chr4g0009851 | 55.556 | 54 | 23 | 1 | 45 | 98 | 169 | 221 | 3.23e-13 | 70.1 |
MsaG010188 | MtrunA17_Chr4g0031961 | 43.333 | 90 | 49 | 2 | 42 | 130 | 128 | 216 | 5.74e-13 | 69.3 |
MsaG010188 | MtrunA17_Chr7g0255711 | 58.182 | 55 | 22 | 1 | 45 | 99 | 91 | 144 | 8.01e-13 | 68.6 |
MsaG010188 | MtrunA17_Chr4g0062921 | 55.172 | 58 | 26 | 0 | 42 | 99 | 232 | 289 | 1.23e-12 | 68.9 |
MsaG010188 | MtrunA17_Chr1g0198601 | 56.364 | 55 | 24 | 0 | 45 | 99 | 211 | 265 | 1.24e-12 | 68.6 |
MsaG010188 | MtrunA17_Chr7g0275401 | 57.407 | 54 | 22 | 1 | 45 | 98 | 192 | 244 | 2.73e-12 | 67.0 |
MsaG010188 | MtrunA17_Chr1g0149841 | 56.364 | 55 | 23 | 1 | 45 | 99 | 191 | 244 | 4.17e-12 | 67.4 |
MsaG010188 | MtrunA17_Chr4g0045361 | 53.448 | 58 | 27 | 0 | 42 | 99 | 271 | 328 | 4.87e-12 | 67.0 |
MsaG010188 | MtrunA17_Chr4g0009991 | 54.902 | 51 | 22 | 1 | 45 | 95 | 67 | 116 | 5.75e-12 | 62.4 |
MsaG010188 | MtrunA17_Chr4g0040481 | 53.704 | 54 | 24 | 1 | 45 | 98 | 158 | 210 | 1.01e-11 | 66.2 |
MsaG010188 | MtrunA17_Chr5g0402631 | 44.737 | 76 | 42 | 0 | 45 | 120 | 214 | 289 | 1.11e-11 | 65.5 |
MsaG010188 | MtrunA17_Chr8g0376881 | 46.667 | 75 | 33 | 2 | 45 | 113 | 209 | 282 | 1.24e-11 | 66.2 |
MsaG010188 | MtrunA17_Chr4g0074401 | 53.333 | 60 | 27 | 1 | 41 | 100 | 199 | 257 | 1.47e-11 | 65.9 |
MsaG010188 | MtrunA17_Chr2g0324891 | 53.846 | 52 | 23 | 1 | 47 | 98 | 163 | 213 | 1.69e-11 | 65.5 |
MsaG010188 | MtrunA17_Chr5g0422621 | 36.364 | 110 | 61 | 2 | 13 | 122 | 171 | 271 | 2.17e-11 | 64.7 |
MsaG010188 | MtrunA17_Chr4g0074411 | 53.333 | 60 | 27 | 1 | 41 | 100 | 197 | 255 | 4.35e-11 | 64.7 |
MsaG010188 | MtrunA17_Chr3g0137101 | 49.153 | 59 | 29 | 1 | 41 | 99 | 194 | 251 | 4.50e-11 | 64.7 |
MsaG010188 | MtrunA17_Chr3g0123131 | 49.153 | 59 | 29 | 1 | 41 | 99 | 195 | 252 | 5.18e-11 | 64.3 |
MsaG010188 | MtrunA17_Chr6g0471041 | 37.634 | 93 | 50 | 3 | 15 | 100 | 135 | 226 | 7.74e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010188 | AT3G04030.3 | 54.745 | 411 | 144 | 12 | 2 | 389 | 3 | 394 | 3.28e-130 | 379 |
MsaG010188 | AT3G04030.2 | 54.258 | 411 | 145 | 13 | 2 | 389 | 3 | 393 | 4.24e-127 | 372 |
MsaG010188 | AT5G18240.1 | 53.571 | 420 | 143 | 15 | 2 | 389 | 3 | 402 | 1.09e-126 | 371 |
MsaG010188 | AT5G18240.4 | 53.571 | 420 | 143 | 15 | 2 | 389 | 3 | 402 | 1.09e-126 | 371 |
MsaG010188 | AT5G18240.5 | 53.095 | 420 | 143 | 16 | 2 | 389 | 3 | 400 | 2.33e-123 | 362 |
MsaG010188 | AT3G04030.1 | 53.285 | 411 | 144 | 13 | 2 | 389 | 3 | 388 | 4.93e-123 | 361 |
MsaG010188 | AT5G18240.2 | 52.143 | 420 | 143 | 16 | 2 | 389 | 3 | 396 | 1.36e-119 | 352 |
MsaG010188 | AT5G18240.3 | 52.143 | 420 | 143 | 16 | 2 | 389 | 3 | 396 | 1.36e-119 | 352 |
MsaG010188 | AT3G04030.5 | 49.107 | 336 | 130 | 11 | 77 | 389 | 1 | 318 | 2.92e-83 | 257 |
MsaG010188 | AT3G04030.4 | 47.321 | 336 | 130 | 12 | 77 | 389 | 1 | 312 | 4.44e-76 | 238 |
MsaG010188 | AT5G18240.6 | 46.377 | 345 | 128 | 15 | 77 | 389 | 1 | 320 | 7.27e-72 | 228 |
MsaG010188 | AT1G69580.2 | 53.333 | 210 | 91 | 2 | 31 | 238 | 20 | 224 | 8.29e-65 | 210 |
MsaG010188 | AT1G69580.1 | 53.110 | 209 | 92 | 2 | 31 | 238 | 20 | 223 | 3.42e-64 | 208 |
MsaG010188 | AT4G13640.1 | 44.643 | 280 | 130 | 7 | 11 | 274 | 1 | 271 | 6.93e-62 | 201 |
MsaG010188 | AT3G24120.1 | 49.528 | 212 | 86 | 2 | 19 | 224 | 15 | 211 | 4.25e-60 | 196 |
MsaG010188 | AT4G13640.2 | 44.170 | 283 | 130 | 8 | 11 | 274 | 1 | 274 | 9.38e-60 | 196 |
MsaG010188 | AT3G24120.2 | 48.837 | 215 | 86 | 3 | 19 | 224 | 15 | 214 | 5.82e-58 | 191 |
MsaG010188 | AT1G79430.2 | 54.706 | 170 | 59 | 3 | 35 | 204 | 24 | 175 | 2.46e-52 | 178 |
MsaG010188 | AT5G45580.2 | 44.949 | 198 | 86 | 3 | 30 | 219 | 8 | 190 | 3.00e-47 | 162 |
MsaG010188 | AT3G12730.1 | 50.595 | 168 | 64 | 4 | 34 | 198 | 12 | 163 | 6.71e-46 | 157 |
MsaG010188 | AT5G45580.1 | 45.503 | 189 | 80 | 3 | 39 | 219 | 1 | 174 | 1.76e-45 | 157 |
MsaG010188 | AT2G01060.1 | 47.024 | 168 | 66 | 4 | 44 | 208 | 14 | 161 | 4.25e-41 | 147 |
MsaG010188 | AT5G29000.1 | 44.805 | 154 | 67 | 2 | 44 | 197 | 187 | 322 | 1.05e-36 | 137 |
MsaG010188 | AT5G29000.3 | 44.805 | 154 | 67 | 2 | 44 | 197 | 187 | 322 | 1.05e-36 | 137 |
MsaG010188 | AT5G29000.2 | 44.805 | 154 | 67 | 2 | 44 | 197 | 230 | 365 | 2.28e-36 | 137 |
MsaG010188 | AT3G04450.4 | 44.586 | 157 | 69 | 2 | 41 | 197 | 194 | 332 | 5.92e-36 | 136 |
MsaG010188 | AT3G04450.2 | 44.586 | 157 | 69 | 2 | 41 | 197 | 194 | 332 | 5.92e-36 | 136 |
MsaG010188 | AT4G28610.1 | 38.462 | 208 | 105 | 5 | 44 | 251 | 224 | 408 | 9.25e-36 | 135 |
MsaG010188 | AT3G04450.1 | 44.586 | 157 | 69 | 2 | 41 | 197 | 234 | 372 | 1.00e-35 | 136 |
MsaG010188 | AT5G06800.2 | 45.455 | 154 | 65 | 2 | 45 | 197 | 192 | 327 | 9.78e-35 | 132 |
MsaG010188 | AT3G13040.3 | 44.654 | 159 | 67 | 3 | 45 | 201 | 241 | 380 | 9.13e-34 | 130 |
MsaG010188 | AT3G13040.1 | 44.654 | 159 | 67 | 3 | 45 | 201 | 241 | 380 | 9.13e-34 | 130 |
MsaG010188 | AT3G13040.2 | 44.654 | 159 | 67 | 3 | 45 | 201 | 241 | 380 | 9.13e-34 | 130 |
MsaG010188 | AT5G06800.1 | 44.444 | 153 | 63 | 2 | 45 | 197 | 192 | 322 | 2.91e-33 | 128 |
MsaG010188 | AT2G20400.1 | 40.854 | 164 | 69 | 3 | 47 | 210 | 233 | 368 | 1.02e-30 | 121 |
MsaG010188 | AT2G20400.2 | 40.854 | 164 | 70 | 4 | 47 | 210 | 233 | 369 | 1.43e-30 | 121 |
MsaG010188 | AT1G79430.1 | 48.438 | 128 | 48 | 3 | 77 | 204 | 1 | 110 | 2.67e-26 | 107 |
MsaG010188 | AT2G01060.2 | 43.939 | 132 | 51 | 4 | 80 | 208 | 1 | 112 | 1.58e-23 | 98.6 |
MsaG010188 | AT3G12730.2 | 44.800 | 125 | 50 | 4 | 77 | 198 | 1 | 109 | 1.19e-21 | 91.7 |
MsaG010188 | AT5G29000.4 | 57.746 | 71 | 28 | 1 | 44 | 114 | 230 | 298 | 5.31e-21 | 92.8 |
MsaG010188 | AT3G04450.3 | 60.656 | 61 | 24 | 0 | 41 | 101 | 234 | 294 | 5.55e-21 | 92.8 |
MsaG010188 | AT5G06800.3 | 61.017 | 59 | 23 | 0 | 45 | 103 | 192 | 250 | 1.03e-19 | 88.6 |
MsaG010188 | AT2G06020.1 | 48.193 | 83 | 39 | 2 | 27 | 105 | 65 | 147 | 2.99e-18 | 85.1 |
MsaG010188 | AT2G38300.1 | 55.072 | 69 | 30 | 1 | 46 | 114 | 55 | 122 | 6.84e-18 | 84.3 |
MsaG010188 | AT2G42660.1 | 58.065 | 62 | 25 | 1 | 46 | 107 | 51 | 111 | 1.59e-17 | 82.0 |
MsaG010188 | AT1G14600.1 | 60.714 | 56 | 22 | 0 | 46 | 101 | 24 | 79 | 6.30e-17 | 80.5 |
MsaG010188 | AT4G04605.1 | 60.377 | 53 | 21 | 0 | 46 | 98 | 15 | 67 | 1.30e-16 | 78.6 |
MsaG010188 | AT2G40260.1 | 58.929 | 56 | 23 | 0 | 46 | 101 | 83 | 138 | 1.34e-16 | 81.3 |
MsaG010188 | AT2G02060.2 | 62.264 | 53 | 20 | 0 | 46 | 98 | 30 | 82 | 2.45e-16 | 78.6 |
MsaG010188 | AT2G02060.1 | 62.264 | 53 | 20 | 0 | 46 | 98 | 30 | 82 | 2.45e-16 | 78.6 |
MsaG010188 | AT5G42630.2 | 55.072 | 69 | 30 | 1 | 33 | 101 | 94 | 161 | 1.23e-15 | 75.9 |
MsaG010188 | AT5G16560.1 | 52.308 | 65 | 31 | 0 | 46 | 110 | 220 | 284 | 1.80e-15 | 77.8 |
MsaG010188 | AT4G04580.1 | 54.717 | 53 | 24 | 0 | 46 | 98 | 15 | 67 | 2.18e-15 | 73.9 |
MsaG010188 | AT1G32240.2 | 53.125 | 64 | 30 | 0 | 46 | 109 | 214 | 277 | 2.84e-15 | 77.0 |
MsaG010188 | AT5G42630.1 | 55.072 | 69 | 30 | 1 | 33 | 101 | 94 | 161 | 3.28e-15 | 75.9 |
MsaG010188 | AT1G32240.1 | 53.125 | 64 | 30 | 0 | 46 | 109 | 214 | 277 | 3.34e-15 | 77.0 |
MsaG010188 | AT4G17695.1 | 51.562 | 64 | 31 | 0 | 46 | 109 | 165 | 228 | 9.96e-15 | 75.1 |
MsaG010188 | AT5G05090.1 | 58.182 | 55 | 22 | 1 | 45 | 99 | 81 | 134 | 3.25e-13 | 69.7 |
MsaG010188 | AT5G59570.2 | 55.172 | 58 | 25 | 1 | 42 | 99 | 138 | 194 | 3.76e-13 | 70.1 |
MsaG010188 | AT5G59570.1 | 55.172 | 58 | 25 | 1 | 42 | 99 | 138 | 194 | 3.76e-13 | 70.1 |
MsaG010188 | AT2G40970.1 | 56.897 | 58 | 24 | 1 | 42 | 99 | 102 | 158 | 4.07e-13 | 69.3 |
MsaG010188 | AT5G45580.3 | 34.074 | 135 | 66 | 3 | 93 | 219 | 16 | 135 | 5.32e-13 | 68.6 |
MsaG010188 | AT3G10760.1 | 50.000 | 70 | 34 | 1 | 30 | 99 | 90 | 158 | 5.47e-13 | 69.7 |
MsaG010188 | AT3G16857.3 | 54.545 | 55 | 24 | 1 | 45 | 99 | 167 | 220 | 6.47e-13 | 70.9 |
MsaG010188 | AT3G16857.1 | 54.545 | 55 | 24 | 1 | 45 | 99 | 237 | 290 | 6.95e-13 | 70.5 |
MsaG010188 | AT3G16857.2 | 54.545 | 55 | 24 | 1 | 45 | 99 | 237 | 290 | 7.59e-13 | 70.5 |
MsaG010188 | AT3G46640.3 | 56.364 | 55 | 23 | 1 | 45 | 99 | 144 | 197 | 1.00e-12 | 68.9 |
MsaG010188 | AT3G46640.2 | 56.364 | 55 | 23 | 1 | 45 | 99 | 144 | 197 | 1.04e-12 | 68.9 |
MsaG010188 | AT3G46640.1 | 56.364 | 55 | 23 | 1 | 45 | 99 | 144 | 197 | 1.04e-12 | 68.9 |
MsaG010188 | AT2G03500.1 | 56.364 | 55 | 24 | 0 | 45 | 99 | 233 | 287 | 1.51e-12 | 68.9 |
MsaG010188 | AT2G01760.3 | 49.231 | 65 | 31 | 2 | 45 | 108 | 135 | 198 | 3.35e-12 | 67.4 |
MsaG010188 | AT5G58080.1 | 51.471 | 68 | 32 | 1 | 32 | 99 | 181 | 247 | 4.72e-12 | 68.2 |
MsaG010188 | AT1G25550.1 | 56.364 | 55 | 24 | 0 | 45 | 99 | 209 | 263 | 5.05e-12 | 67.0 |
MsaG010188 | AT2G01760.1 | 49.231 | 65 | 31 | 2 | 45 | 108 | 200 | 263 | 5.22e-12 | 67.4 |
MsaG010188 | AT2G01760.2 | 49.231 | 65 | 31 | 2 | 45 | 108 | 228 | 291 | 7.32e-12 | 67.0 |
MsaG010188 | AT2G20570.1 | 55.769 | 52 | 22 | 1 | 47 | 98 | 155 | 205 | 2.45e-11 | 65.5 |
MsaG010188 | AT2G20570.2 | 55.769 | 52 | 22 | 1 | 47 | 98 | 171 | 221 | 2.68e-11 | 65.5 |
MsaG010188 | AT1G49560.1 | 39.583 | 96 | 55 | 1 | 45 | 137 | 192 | 287 | 3.46e-11 | 64.3 |
MsaG010188 | AT5G44190.1 | 50.000 | 54 | 26 | 1 | 45 | 98 | 147 | 199 | 3.98e-11 | 64.7 |
MsaG010188 | AT3G25790.1 | 38.202 | 89 | 55 | 0 | 50 | 138 | 201 | 289 | 4.18e-11 | 64.3 |
MsaG010188 | AT5G44190.2 | 50.000 | 54 | 26 | 1 | 45 | 98 | 147 | 199 | 4.72e-11 | 64.3 |
MsaG010188 | AT3G62670.1 | 48.438 | 64 | 29 | 1 | 41 | 100 | 207 | 270 | 5.90e-11 | 64.3 |
Find 59 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCATTCAAAATGGAGGGTT+TGG | 0.270343 | 2:-69817718 | MsaT010188.1:CDS |
ACACTTGGTAGACAGAATTT+AGG | 0.292229 | 2:-69817925 | MsaT010188.1:CDS |
ATGCAAAACCTAGATTAAAA+TGG | 0.295286 | 2:-69819013 | MsaT010188.1:CDS |
AAAACAATGAAGTACTAAAA+TGG | 0.316678 | 2:-69817603 | MsaT010188.1:CDS |
GGAAATGGTTCTAGTGATTC+AGG | 0.325156 | 2:-69819053 | MsaT010188.1:CDS |
GTTGAGAATCATTCAGATAT+TGG | 0.332253 | 2:-69817481 | MsaT010188.1:CDS |
CAATAACAACCATGTGTTCA+TGG | 0.338392 | 2:-69817677 | MsaT010188.1:CDS |
GAACAAGAAATCATTCAAAA+TGG | 0.339387 | 2:-69817727 | MsaT010188.1:CDS |
ATGACTCTTTAAATGATATA+AGG | 0.363326 | 2:+69818769 | None:intergenic |
TAGAACCATTTCCTGTTTGA+AGG | 0.369263 | 2:+69819063 | None:intergenic |
GTAAACAACTTGATTTGAAT+AGG | 0.370306 | 2:-69817384 | MsaT010188.1:CDS |
ATGAAACTCATGGGAATTCC+AGG | 0.370323 | 2:-69818797 | MsaT010188.1:CDS |
ACAAAGGAACACTGCAAGAT+TGG | 0.379529 | 2:-69817449 | MsaT010188.1:CDS |
AGACAGAATTTAGGAATAGT+AGG | 0.380211 | 2:-69817916 | MsaT010188.1:CDS |
TCATTTAAAGAGTCATCTTC+AGG | 0.380557 | 2:-69818762 | MsaT010188.1:intron |
ATGTTCCTTCAAACAGGAAA+TGG | 0.408546 | 2:-69819068 | MsaT010188.1:CDS |
TTTATTCATGTGAGTTCCAT+TGG | 0.431480 | 2:+69818437 | None:intergenic |
CTTTCTCAAGCACTGATTGA+AGG | 0.431720 | 2:+69817956 | None:intergenic |
TTGATTTGAATAGGTTCAGT+TGG | 0.449179 | 2:-69817375 | MsaT010188.1:CDS |
ATAAACCTTGCATGAAGATC+AGG | 0.452639 | 2:+69818987 | None:intergenic |
CTGTCCATCGAGCCGTCGTT+TGG | 0.455742 | 2:+69817784 | None:intergenic |
CTTTCCTTTCCATGAACACA+TGG | 0.455778 | 2:+69817668 | None:intergenic |
CACATGAATAAATTAACGCT+TGG | 0.461850 | 2:-69818426 | MsaT010188.1:CDS |
ATCGAGCCGTCGTTTGGTTG+AGG | 0.465457 | 2:+69817790 | None:intergenic |
AGGCACATGTTCCTTCAAAC+AGG | 0.475299 | 2:-69819074 | MsaT010188.1:CDS |
AATGAATTAGAAAGAAATCA+TGG | 0.479388 | 2:-69817526 | MsaT010188.1:CDS |
TACAAAGACACTTGCAGCTA+AGG | 0.482388 | 2:-69817999 | MsaT010188.1:CDS |
GGAAATTTGTCTATGAACAT+TGG | 0.485289 | 2:-69817505 | MsaT010188.1:CDS |
ATAGAAGCAGTTAATCAGTT+AGG | 0.490373 | 2:-69818966 | MsaT010188.1:CDS |
ATCGTCTGACCGATCACAAA+AGG | 0.496813 | 2:-69817749 | MsaT010188.1:CDS |
GACAGAATTTAGGAATAGTA+GGG | 0.543038 | 2:-69817915 | MsaT010188.1:CDS |
CAAGAAATCATTCAAAATGG+AGG | 0.547960 | 2:-69817724 | MsaT010188.1:CDS |
AAATGATATAAGGTAAGCCC+TGG | 0.549274 | 2:+69818779 | None:intergenic |
AAGAAATCATTCAAAATGGA+GGG | 0.551325 | 2:-69817723 | MsaT010188.1:CDS |
TCAGAGATGAAGGAGTTACA+AGG | 0.555449 | 2:-69817820 | MsaT010188.1:CDS |
CAACAAGCAACTGAATTAGC+AGG | 0.559201 | 2:-69817643 | MsaT010188.1:CDS |
GGCGCTGCAAATGCAGATTG+AGG | 0.562019 | 2:-69818254 | MsaT010188.1:CDS |
TCAACCAAACGACGGCTCGA+TGG | 0.568429 | 2:-69817788 | MsaT010188.1:CDS |
AATTCATTATTATTTCCTAA+CGG | 0.568566 | 2:+69817541 | None:intergenic |
ACAACCATGTGTTCATGGAA+AGG | 0.581829 | 2:-69817672 | MsaT010188.1:CDS |
GAGAGACTTTCTGAAACCAA+TGG | 0.583065 | 2:-69818453 | MsaT010188.1:CDS |
TTGTTGTTGTTATTAGTCTG+TGG | 0.584414 | 2:+69818402 | None:intergenic |
AAAACAGTAATGAAACTCAT+GGG | 0.594613 | 2:-69818806 | MsaT010188.1:CDS |
AGGAACATGTGCCTCTCAGA+TGG | 0.596232 | 2:+69819083 | None:intergenic |
AAGACTCAATGAACAACTTG+AGG | 0.597565 | 2:-69818224 | MsaT010188.1:intron |
GAGAAAGCTCAAGAAACACT+TGG | 0.604326 | 2:-69817940 | MsaT010188.1:CDS |
CAGCTAAGGATAGAAGCTCA+AGG | 0.609742 | 2:-69817985 | MsaT010188.1:CDS |
AGATTAAGTAAGAATCTGCA+TGG | 0.609923 | 2:-69818627 | MsaT010188.1:CDS |
AGTCGTGGAGATAACAATGA+AGG | 0.610907 | 2:-69817418 | MsaT010188.1:CDS |
GGACACCTGATCTTCATGCA+AGG | 0.639163 | 2:-69818992 | MsaT010188.1:CDS |
GAAGCAGTTAATCAGTTAGG+CGG | 0.649355 | 2:-69818963 | MsaT010188.1:CDS |
AGATTGGATCTAAACAGTCG+TGG | 0.649789 | 2:-69817433 | MsaT010188.1:CDS |
TGAAACTCATGGGAATTCCA+GGG | 0.657200 | 2:-69818796 | MsaT010188.1:CDS |
TGTTGAATTCAGACACTGTG+AGG | 0.662262 | 2:+69817846 | None:intergenic |
TAGAGATTTACACATAAGCG+AGG | 0.678252 | 2:-69818275 | MsaT010188.1:CDS |
AGTTAATCAGTTAGGCGGAG+CGG | 0.682383 | 2:-69818958 | MsaT010188.1:CDS |
AGTACTAAAATGGTGTGTTG+AGG | 0.684708 | 2:-69817593 | MsaT010188.1:CDS |
GAATGTCAATACCATCTGAG+AGG | 0.692919 | 2:-69819094 | MsaT010188.1:CDS |
ATATTGGTGAGTTTCAACAA+AGG | 0.741956 | 2:-69817465 | MsaT010188.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 69817369 | 69819162 | 69817369 | ID=MsaG010188 |
Chr2 | mRNA | 69817369 | 69819162 | 69817369 | ID=MsaT010188.1;Parent=MsaG010188 |
Chr2 | exon | 69817369 | 69818022 | 69817369 | ID=MsaT010188.1.exon6;Parent=MsaT010188.1 |
Chr2 | CDS | 69817369 | 69818022 | 69817369 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Chr2 | exon | 69818225 | 69818294 | 69818225 | ID=MsaT010188.1.exon5;Parent=MsaT010188.1 |
Chr2 | CDS | 69818225 | 69818294 | 69818225 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Chr2 | exon | 69818402 | 69818501 | 69818402 | ID=MsaT010188.1.exon4;Parent=MsaT010188.1 |
Chr2 | CDS | 69818402 | 69818501 | 69818402 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Chr2 | exon | 69818595 | 69818655 | 69818595 | ID=MsaT010188.1.exon3;Parent=MsaT010188.1 |
Chr2 | CDS | 69818595 | 69818655 | 69818595 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Chr2 | exon | 69818763 | 69818839 | 69818763 | ID=MsaT010188.1.exon2;Parent=MsaT010188.1 |
Chr2 | CDS | 69818763 | 69818839 | 69818763 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Chr2 | exon | 69818955 | 69819162 | 69818955 | ID=MsaT010188.1.exon1;Parent=MsaT010188.1 |
Chr2 | CDS | 69818955 | 69819162 | 69818955 | ID=cds.MsaT010188.1;Parent=MsaT010188.1 |
Gene Sequence |
Protein sequence |