AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG010279

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010279 MtrunA17_Chr2g0322521 86.856 388 34 3 9 389 7 384 0.0 595
MsaG010279 MtrunA17_Chr8g0354661 76.860 121 28 0 31 151 37 157 6.83e-64 216
MsaG010279 MtrunA17_Chr3g0080861 71.654 127 36 0 25 151 31 157 4.03e-63 213
MsaG010279 MtrunA17_Chr3g0099131 81.250 112 21 0 31 142 41 152 5.30e-62 210
MsaG010279 MtrunA17_Chr1g0154031 68.033 122 39 0 31 152 76 197 2.88e-56 192
MsaG010279 MtrunA17_Chr1g0192411 64.103 117 42 0 31 147 12 128 2.42e-49 174
MsaG010279 MtrunA17_Chr1g0203411 63.636 110 40 0 30 139 11 120 1.75e-48 168
MsaG010279 MtrunA17_Chr2g0323411 61.062 113 43 1 28 139 9 121 2.20e-46 163
MsaG010279 MtrunA17_Chr5g0395281 63.208 106 39 0 29 134 10 115 2.69e-46 162
MsaG010279 MtrunA17_Chr1g0167661 62.617 107 40 0 28 134 9 115 3.15e-46 160
MsaG010279 MtrunA17_Chr4g0039971 64.151 106 38 0 29 134 11 116 3.71e-46 164
MsaG010279 MtrunA17_Chr2g0281071 62.162 111 41 1 30 139 12 122 4.59e-46 163
MsaG010279 MtrunA17_Chr3g0115821 62.264 106 40 0 29 134 10 115 6.63e-46 162
MsaG010279 MtrunA17_Chr1g0167691 60.748 107 42 0 28 134 9 115 7.56e-46 160
MsaG010279 MtrunA17_Chr4g0060721 36.949 295 132 9 28 300 10 272 1.34e-45 161
MsaG010279 MtrunA17_Chr8g0349261 61.261 111 42 1 25 134 7 117 1.98e-45 160
MsaG010279 MtrunA17_Chr5g0410961 61.321 106 41 0 29 134 10 115 2.34e-45 161
MsaG010279 MtrunA17_Chr4g0048511 61.261 111 42 1 30 139 12 122 2.75e-45 161
MsaG010279 MtrunA17_Chr8g0346561 60.360 111 43 1 27 136 8 118 4.88e-45 159
MsaG010279 MtrunA17_Chr7g0274581 58.879 107 44 0 28 134 9 115 7.39e-45 155
MsaG010279 MtrunA17_Chr1g0187761 59.813 107 43 0 28 134 9 115 2.03e-44 156
MsaG010279 MtrunA17_Chr1g0193371 63.208 106 39 0 31 136 12 117 2.28e-44 159
MsaG010279 MtrunA17_Chr6g0453211 62.745 102 38 0 28 129 9 110 6.34e-44 157
MsaG010279 MtrunA17_Chr4g0068061 59.813 107 43 0 28 134 9 115 7.64e-44 157
MsaG010279 MtrunA17_Chr3g0092401 58.879 107 44 0 28 134 10 116 1.04e-43 156
MsaG010279 MtrunA17_Chr7g0261281 58.879 107 44 0 28 134 9 115 1.06e-43 155
MsaG010279 MtrunA17_Chr6g0453471 58.879 107 44 0 28 134 9 115 4.35e-43 155
MsaG010279 MtrunA17_Chr3g0099141 81.707 82 15 0 31 112 40 121 4.98e-43 149
MsaG010279 MtrunA17_Chr1g0193801 61.321 106 41 0 31 136 12 117 5.01e-43 156
MsaG010279 MtrunA17_Chr7g0217221 58.879 107 44 0 28 134 9 115 5.02e-43 153
MsaG010279 MtrunA17_Chr7g0275911 54.630 108 49 0 27 134 8 115 7.03e-43 152
MsaG010279 MtrunA17_Chr7g0217741 59.813 107 43 0 28 134 9 115 7.52e-43 153
MsaG010279 MtrunA17_Chr7g0254411 59.813 107 43 0 28 134 9 115 9.39e-43 154
MsaG010279 MtrunA17_Chr5g0440781 56.897 116 49 1 29 143 10 125 1.12e-42 149
MsaG010279 MtrunA17_Chr7g0228231 57.895 114 44 1 20 133 7 116 1.32e-42 150
MsaG010279 MtrunA17_Chr4g0044421 48.366 153 73 1 22 174 3 149 1.91e-42 149
MsaG010279 MtrunA17_Chr5g0440761 56.897 116 49 1 29 143 10 125 2.27e-42 151
MsaG010279 MtrunA17_Chr4g0022931 55.963 109 48 0 26 134 8 116 2.78e-42 151
MsaG010279 MtrunA17_Chr7g0270891 60.377 106 42 0 31 136 12 117 2.82e-42 154
MsaG010279 MtrunA17_Chr1g0194301 54.918 122 53 1 17 136 17 138 3.02e-42 151
MsaG010279 MtrunA17_Chr5g0441141 56.897 116 49 1 29 143 10 125 3.23e-42 150
MsaG010279 MtrunA17_Chr4g0022901 56.881 109 47 0 26 134 8 116 3.68e-42 150
MsaG010279 MtrunA17_Chr1g0186061 60.952 105 41 0 32 136 21 125 3.90e-42 150
MsaG010279 MtrunA17_Chr4g0037141 62.745 102 38 0 33 134 14 115 4.59e-42 150
MsaG010279 MtrunA17_Chr3g0110351 52.381 126 59 1 28 152 9 134 6.07e-42 151
MsaG010279 MtrunA17_Chr4g0070611 55.455 110 49 0 27 136 8 117 6.36e-42 151
MsaG010279 MtrunA17_Chr4g0028311 40.299 201 102 4 28 220 9 199 6.96e-42 151
MsaG010279 MtrunA17_Chr3g0121241 54.630 108 49 0 27 134 38 145 9.02e-42 150
MsaG010279 MtrunA17_Chr4g0070641 56.481 108 47 0 27 134 8 115 1.02e-41 146
MsaG010279 MtrunA17_Chr4g0058631 38.596 228 111 5 31 235 12 233 1.14e-41 152
MsaG010279 MtrunA17_Chr6g0450101 59.223 103 42 0 31 133 14 116 1.43e-41 147
MsaG010279 MtrunA17_Chr3g0131121 62.745 102 38 0 33 134 14 115 1.90e-41 149
MsaG010279 MtrunA17_Chr5g0434571 57.798 109 46 0 28 136 45 153 2.02e-41 151
MsaG010279 MtrunA17_Chr1g0211161 55.652 115 51 0 20 134 2 116 2.50e-41 147
MsaG010279 MtrunA17_Chr4g0022911 55.963 109 48 0 26 134 8 116 4.80e-41 148
MsaG010279 MtrunA17_Chr2g0309911 57.407 108 46 0 27 134 7 114 4.82e-41 149
MsaG010279 MtrunA17_Chr4g0042671 56.637 113 48 1 28 139 9 121 5.00e-41 151
MsaG010279 MtrunA17_Chr7g0271241 66.327 98 33 0 31 128 12 109 5.09e-41 150
MsaG010279 MtrunA17_Chr2g0328771 56.604 106 46 0 31 136 20 125 6.84e-41 149
MsaG010279 MtrunA17_Chr4g0032401 54.167 120 53 1 17 136 5 122 1.11e-40 148
MsaG010279 MtrunA17_Chr4g0022891 58.095 105 44 0 28 132 9 113 1.28e-40 145
MsaG010279 MtrunA17_Chr3g0117091 58.879 107 44 0 28 134 9 115 1.28e-40 149
MsaG010279 MtrunA17_Chr2g0323351 58.491 106 44 0 28 133 9 114 1.60e-40 145
MsaG010279 MtrunA17_Chr1g0168661 59.048 105 43 0 32 136 22 126 1.63e-40 145
MsaG010279 MtrunA17_Chr5g0435101 56.731 104 45 0 31 134 11 114 1.63e-40 144
MsaG010279 MtrunA17_Chr8g0342541 57.009 107 46 0 28 134 9 115 2.78e-40 147
MsaG010279 MtrunA17_Chr1g0194291 52.778 108 51 0 29 136 19 126 2.96e-40 145
MsaG010279 MtrunA17_Chr2g0330041 57.944 107 45 0 28 134 9 115 3.58e-40 149
MsaG010279 MtrunA17_Chr1g0151941 51.818 110 52 1 31 139 12 121 4.86e-40 144
MsaG010279 MtrunA17_Chr1g0209661 52.830 106 50 0 31 136 27 132 4.88e-40 146
MsaG010279 MtrunA17_Chr1g0194951 56.481 108 47 0 27 134 8 115 5.32e-40 147
MsaG010279 MtrunA17_Chr7g0264641 48.092 131 64 2 28 154 9 139 5.71e-40 145
MsaG010279 MtrunA17_Chr3g0088461 54.128 109 50 0 28 136 19 127 5.78e-40 147
MsaG010279 MtrunA17_Chr4g0057031 56.075 107 47 0 28 134 9 115 6.20e-40 144
MsaG010279 MtrunA17_Chr8g0342521 57.944 107 45 0 28 134 9 115 7.76e-40 146
MsaG010279 MtrunA17_Chr7g0228891 55.963 109 48 0 28 136 9 117 1.02e-39 144
MsaG010279 MtrunA17_Chr2g0327351 60.194 103 40 1 28 129 9 111 1.05e-39 145
MsaG010279 MtrunA17_Chr8g0385321 59.804 102 41 0 33 134 14 115 1.32e-39 145
MsaG010279 MtrunA17_Chr3g0103281 56.731 104 45 0 31 134 12 115 1.97e-39 145
MsaG010279 MtrunA17_Chr1g0152011 57.407 108 45 1 28 134 9 116 1.99e-39 145
MsaG010279 MtrunA17_Chr2g0311221 58.824 102 42 0 28 129 11 112 4.19e-39 144
MsaG010279 MtrunA17_Chr5g0441131 51.261 119 57 1 32 149 10 128 1.25e-38 138
MsaG010279 MtrunA17_Chr8g0387421 54.717 106 48 0 31 136 12 117 1.27e-38 142
MsaG010279 MtrunA17_Chr5g0400821 55.556 108 47 1 28 134 9 116 1.50e-38 142
MsaG010279 MtrunA17_Chr6g0452271 54.206 107 49 0 28 134 9 115 1.56e-38 142
MsaG010279 MtrunA17_Chr5g0417821 57.658 111 46 1 30 139 6 116 2.57e-38 140
MsaG010279 MtrunA17_Chr4g0013361 56.364 110 47 1 28 136 7 116 6.63e-38 140
MsaG010279 MtrunA17_Chr3g0135311 54.630 108 48 1 28 134 9 116 7.16e-38 141
MsaG010279 MtrunA17_Chr5g0397231 57.576 99 42 0 31 129 12 110 9.07e-38 140
MsaG010279 MtrunA17_Chr4g0055981 50.427 117 58 0 18 134 42 158 1.53e-37 137
MsaG010279 MtrunA17_Chr8g0342481 55.556 108 47 1 28 134 9 116 2.02e-37 141
MsaG010279 MtrunA17_Chr4g0054391 58.824 102 41 1 28 128 9 110 2.59e-37 138
MsaG010279 MtrunA17_Chr1g0203441 58.252 103 43 0 32 134 14 116 2.68e-37 137
MsaG010279 MtrunA17_Chr7g0269831 61.682 107 41 0 28 134 9 115 4.63e-37 139
MsaG010279 MtrunA17_Chr8g0343831 56.863 102 44 0 33 134 10 111 5.96e-37 136
MsaG010279 MtrunA17_Chr4g0022881 51.887 106 51 0 28 133 9 114 7.67e-37 135
MsaG010279 MtrunA17_Chr8g0334881 55.140 107 47 1 31 136 10 116 5.24e-36 135
MsaG010279 MtrunA17_Chr6g0470971 53.704 108 50 0 28 135 11 118 5.92e-36 134
MsaG010279 MtrunA17_Chr1g0180391 46.825 126 67 0 31 156 19 144 1.26e-35 132
MsaG010279 MtrunA17_Chr7g0220341 50.000 120 58 1 17 134 11 130 1.46e-35 133
MsaG010279 MtrunA17_Chr2g0327821 51.923 104 50 0 31 134 6 109 1.57e-35 132
MsaG010279 MtrunA17_Chr4g0068921 50.400 125 55 2 9 133 9 126 2.24e-35 130
MsaG010279 MtrunA17_Chr4g0072751 55.340 103 45 1 28 129 9 111 4.03e-35 134
MsaG010279 MtrunA17_Chr7g0247131 70.667 75 22 0 63 137 10 84 9.53e-35 130
MsaG010279 MtrunA17_Chr6g0487491 48.333 120 53 2 28 138 9 128 2.04e-34 129
MsaG010279 MtrunA17_Chr4g0030881 51.327 113 47 2 32 137 8 119 3.92e-34 129
MsaG010279 MtrunA17_Chr8g0360111 53.922 102 47 0 30 131 24 125 5.82e-34 128
MsaG010279 MtrunA17_Chr2g0293911 51.327 113 51 1 21 133 18 126 2.35e-33 128
MsaG010279 MtrunA17_Chr5g0434931 45.614 114 62 0 22 135 26 139 3.75e-33 126
MsaG010279 MtrunA17_Chr7g0240821 49.515 103 52 0 35 137 5 107 1.61e-32 123
MsaG010279 MtrunA17_Chr5g0434911 48.113 106 55 0 30 135 20 125 5.24e-32 123
MsaG010279 MtrunA17_Chr5g0434831 48.571 105 54 0 30 134 6 110 6.16e-32 120
MsaG010279 MtrunA17_Chr5g0434841 49.524 105 53 0 30 134 19 123 6.94e-32 124
MsaG010279 MtrunA17_Chr7g0228991 46.847 111 59 0 24 134 22 132 1.20e-31 122
MsaG010279 MtrunA17_Chr4g0008551 50.467 107 52 1 33 139 38 143 3.75e-31 123
MsaG010279 MtrunA17_Chr2g0294811 57.500 80 34 0 28 107 9 88 6.05e-30 113
MsaG010279 MtrunA17_Chr5g0401731 52.941 102 47 1 33 134 15 115 3.37e-29 117
MsaG010279 MtrunA17_Chr4g0053431 51.961 102 48 1 33 134 5 105 4.03e-29 115
MsaG010279 MtrunA17_Chr5g0429661 53.774 106 45 3 31 135 120 222 6.27e-29 117
MsaG010279 MtrunA17_Chr4g0042611 57.143 77 33 0 31 107 12 88 9.72e-29 108
MsaG010279 MtrunA17_Chr3g0133601 50.000 106 52 1 33 138 37 141 1.06e-28 113
MsaG010279 MtrunA17_Chr6g0454921 50.980 102 49 1 33 134 15 115 2.11e-28 111
MsaG010279 MtrunA17_Chr6g0453751 57.447 94 31 2 30 114 19 112 2.79e-28 108
MsaG010279 MtrunA17_Chr3g0117511 42.958 142 76 3 5 143 155 294 3.19e-28 116
MsaG010279 MtrunA17_Chr5g0425591 54.167 96 39 2 20 114 2 93 5.18e-28 107
MsaG010279 MtrunA17_Chr5g0395221 53.659 82 38 0 26 107 7 88 9.31e-28 105
MsaG010279 MtrunA17_Chr4g0058991 49.541 109 51 3 28 135 204 309 2.69e-27 114
MsaG010279 MtrunA17_Chr8g0342531 44.643 112 51 1 31 142 12 112 3.08e-26 104
MsaG010279 MtrunA17_Chr8g0342511 57.895 76 32 0 31 106 12 87 3.83e-26 102
MsaG010279 MtrunA17_Chr2g0323321 51.190 84 41 0 30 113 10 93 3.87e-26 102
MsaG010279 MtrunA17_Chr7g0228531 52.381 105 47 3 33 137 220 321 8.86e-26 109
MsaG010279 MtrunA17_Chr6g0480581 45.946 111 57 2 33 142 4 112 1.92e-25 104
MsaG010279 MtrunA17_Chr8g0342461 58.442 77 31 1 33 108 14 90 6.27e-25 100
MsaG010279 MtrunA17_Chr4g0042501 44.030 134 71 3 5 136 76 207 1.18e-24 105
MsaG010279 MtrunA17_Chr8g0342471 58.442 77 31 1 33 108 14 90 1.45e-24 99.0
MsaG010279 MtrunA17_Chr6g0460661 44.444 108 57 2 33 139 16 121 1.68e-24 99.4
MsaG010279 MtrunA17_Chr5g0417621 42.336 137 72 4 5 136 102 236 2.98e-24 104
MsaG010279 MtrunA17_Chr1g0157731 46.667 105 53 2 31 134 89 191 4.50e-24 105
MsaG010279 MtrunA17_Chr1g0157731 36.000 100 62 2 33 131 39 137 1.17e-11 67.4
MsaG010279 MtrunA17_Chr7g0238631 48.077 104 53 1 31 134 111 213 1.48e-23 103
MsaG010279 MtrunA17_Chr5g0437321 49.107 112 56 1 33 144 19 129 1.52e-23 100
MsaG010279 MtrunA17_Chr3g0139671 44.762 105 55 2 31 134 83 185 2.86e-23 103
MsaG010279 MtrunA17_Chr3g0139671 36.000 100 62 2 33 131 33 131 1.05e-11 67.4
MsaG010279 MtrunA17_Chr7g0254261 45.238 126 62 3 22 142 74 197 4.19e-23 100
MsaG010279 MtrunA17_Chr6g0460671 44.762 105 55 2 33 136 99 201 1.27e-22 99.0
MsaG010279 MtrunA17_Chr3g0125801 48.571 105 51 2 33 136 16 118 2.61e-22 96.7
MsaG010279 MtrunA17_Chr7g0228401 52.326 86 40 1 44 129 290 374 6.38e-22 98.6
MsaG010279 MtrunA17_Chr7g0238651 42.718 103 57 1 36 136 10 112 7.57e-22 96.7
MsaG010279 MtrunA17_Chr5g0434901 54.412 68 31 0 65 132 7 74 1.01e-21 90.5
MsaG010279 MtrunA17_Chr1g0177901 46.154 117 50 3 42 146 3 118 1.09e-21 93.2
MsaG010279 MtrunA17_Chr7g0229101 51.429 70 34 0 63 132 4 73 8.25e-21 90.5
MsaG010279 MtrunA17_Chr7g0228481 46.392 97 50 2 33 129 220 314 2.22e-20 93.2
MsaG010279 MtrunA17_Chr5g0397841 46.939 98 51 1 31 128 108 204 6.18e-20 92.4
MsaG010279 MtrunA17_Chr7g0229131 46.053 76 41 0 63 138 4 79 1.68e-19 85.9
MsaG010279 MtrunA17_Chr3g0093811 46.341 82 41 1 56 134 4 85 1.90e-19 88.2
MsaG010279 MtrunA17_Chr1g0193901 53.261 92 41 2 26 115 6 97 9.25e-19 81.6
MsaG010279 MtrunA17_Chr1g0193891 53.261 92 41 2 26 115 6 97 9.25e-19 81.6
MsaG010279 MtrunA17_Chr1g0193871 53.261 92 41 2 26 115 6 97 9.25e-19 81.6
MsaG010279 MtrunA17_Chr1g0193881 53.261 92 41 2 26 115 6 97 9.25e-19 81.6
MsaG010279 MtrunA17_Chr7g0233061 55.556 63 28 0 67 129 211 273 2.40e-18 86.3
MsaG010279 MtrunA17_Chr8g0362231 36.364 99 62 1 36 134 25 122 7.53e-15 76.3
MsaG010279 MtrunA17_Chr5g0416341 35.644 101 64 1 36 136 29 128 8.05e-15 76.6
MsaG010279 MtrunA17_Chr3g0104491 48.529 68 30 2 72 135 1 67 4.77e-13 69.7
MsaG010279 MtrunA17_Chr7g0233151 55.769 52 22 1 84 135 1 51 1.80e-11 62.8
MsaG010279 MtrunA17_Chr5g0421201 52.941 51 24 0 83 133 9 59 5.29e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010279 AT2G32460.2 83.594 128 21 0 30 157 5 132 5.70e-73 238
MsaG010279 AT2G32460.1 83.594 128 21 0 30 157 17 144 5.98e-73 238
MsaG010279 AT5G06100.1 75.200 125 31 0 30 154 31 155 1.33e-67 223
MsaG010279 AT5G06100.5 75.200 125 31 0 30 154 31 155 1.04e-66 223
MsaG010279 AT5G06100.2 75.200 125 31 0 30 154 31 155 1.04e-66 223
MsaG010279 AT5G06100.3 75.200 125 31 0 30 154 31 155 1.04e-66 223
MsaG010279 AT5G06100.4 75.200 125 31 0 30 154 31 155 1.04e-66 223
MsaG010279 AT3G11440.2 72.093 129 36 0 28 156 38 166 8.08e-66 219
MsaG010279 AT3G11440.3 72.093 129 36 0 28 156 38 166 8.09e-65 219
MsaG010279 AT3G11440.4 72.093 129 36 0 28 156 38 166 8.09e-65 219
MsaG010279 AT3G11440.1 72.093 129 36 0 28 156 38 166 8.09e-65 219
MsaG010279 AT5G55020.1 75.207 121 30 0 26 146 21 141 7.69e-62 210
MsaG010279 AT4G26930.1 71.429 126 36 0 20 145 8 133 3.50e-61 204
MsaG010279 AT2G26960.1 69.466 131 40 0 21 151 10 140 1.38e-60 204
MsaG010279 AT3G61250.1 61.682 107 41 0 28 134 9 115 3.14e-47 165
MsaG010279 AT4G05100.1 60.909 110 43 0 25 134 7 116 1.19e-46 164
MsaG010279 AT4G21440.1 61.062 113 43 1 28 139 9 121 3.60e-46 164
MsaG010279 AT5G26660.1 55.039 129 51 2 31 152 12 140 5.55e-45 160
MsaG010279 AT4G28110.1 59.292 113 45 1 28 139 9 121 8.46e-45 158
MsaG010279 AT3G28910.1 60.748 107 42 0 28 134 9 115 9.78e-45 159
MsaG010279 AT3G01530.1 55.645 124 52 1 14 137 11 131 1.08e-44 155
MsaG010279 AT5G65230.1 62.264 106 40 0 29 134 10 115 2.93e-44 157
MsaG010279 AT1G08810.1 61.682 107 41 0 28 134 9 115 3.42e-44 157
MsaG010279 AT1G74650.1 62.500 104 39 0 31 134 12 115 3.99e-44 158
MsaG010279 AT5G10280.1 62.264 106 40 0 29 134 10 115 4.09e-44 158
MsaG010279 AT1G18570.1 62.037 108 41 0 27 134 9 116 5.30e-44 158
MsaG010279 AT3G23250.1 55.172 116 52 0 28 143 9 124 5.73e-44 156
MsaG010279 AT1G79180.1 60.748 107 42 0 28 134 11 117 1.01e-43 155
MsaG010279 AT3G47600.1 58.716 109 45 0 28 136 9 117 1.06e-43 157
MsaG010279 AT1G22640.1 62.500 104 39 0 31 134 12 115 1.11e-43 154
MsaG010279 AT4G38620.1 52.083 144 65 2 33 174 14 155 1.44e-43 155
MsaG010279 AT2G31180.1 56.250 112 49 0 28 139 9 120 1.59e-43 154
MsaG010279 AT3G01140.2 59.813 107 43 0 28 134 9 115 1.95e-43 156
MsaG010279 AT5G62470.2 59.813 107 43 0 28 134 9 115 2.07e-43 156
MsaG010279 AT5G60890.1 61.682 107 41 0 30 136 11 117 2.31e-43 155
MsaG010279 AT3G02940.2 59.434 106 43 0 29 134 10 115 2.42e-43 155
MsaG010279 AT5G15310.4 59.813 107 43 0 28 134 9 115 2.42e-43 153
MsaG010279 AT4G01680.3 61.321 106 41 0 31 136 12 117 2.49e-43 153
MsaG010279 AT1G34670.1 61.905 105 40 0 30 134 11 115 2.64e-43 157
MsaG010279 AT5G15310.1 59.813 107 43 0 28 134 9 115 2.79e-43 155
MsaG010279 AT5G54230.1 48.588 177 73 6 31 206 12 171 3.08e-43 155
MsaG010279 AT5G15310.2 59.813 107 43 0 28 134 9 115 3.54e-43 155
MsaG010279 AT4G09460.1 62.745 102 38 0 33 134 14 115 4.09e-43 152
MsaG010279 AT3G01140.1 59.813 107 43 0 28 134 52 158 4.36e-43 157
MsaG010279 AT3G02940.1 59.434 106 43 0 29 134 10 115 5.10e-43 155
MsaG010279 AT3G02940.3 59.434 106 43 0 29 134 10 115 5.10e-43 155
MsaG010279 AT1G35515.1 61.538 104 40 0 31 134 12 115 6.37e-43 151
MsaG010279 AT4G17785.2 60.550 109 43 0 26 134 8 116 7.87e-43 155
MsaG010279 AT4G17785.1 60.550 109 43 0 26 134 8 116 8.31e-43 155
MsaG010279 AT3G27810.1 57.944 107 45 0 27 133 16 122 1.22e-42 150
MsaG010279 AT5G16770.4 60.000 105 42 0 30 134 11 115 1.23e-42 154
MsaG010279 AT5G16770.3 60.000 105 42 0 30 134 11 115 1.23e-42 154
MsaG010279 AT4G01680.1 61.321 106 41 0 31 136 12 117 1.29e-42 154
MsaG010279 AT2G26950.1 51.128 133 65 0 19 151 4 136 1.63e-42 155
MsaG010279 AT1G56160.1 60.577 104 41 0 31 134 14 117 1.89e-42 152
MsaG010279 AT5G16770.1 60.000 105 42 0 30 134 11 115 1.97e-42 154
MsaG010279 AT5G16770.2 60.000 105 42 0 30 134 11 115 1.97e-42 154
MsaG010279 AT3G13540.1 55.556 108 48 0 27 134 19 126 4.66e-42 150
MsaG010279 AT5G62470.1 59.813 107 42 1 28 134 9 114 5.11e-42 153
MsaG010279 AT1G16490.1 57.944 107 45 0 28 134 11 117 5.69e-42 150
MsaG010279 AT1G57560.2 60.577 104 41 0 31 134 12 115 5.90e-42 150
MsaG010279 AT1G57560.1 60.577 104 41 0 31 134 12 115 5.96e-42 152
MsaG010279 AT5G12870.1 55.738 122 51 1 15 136 5 123 6.72e-42 150
MsaG010279 AT4G13480.1 55.725 131 50 2 32 162 7 129 7.68e-42 150
MsaG010279 AT5G07690.1 60.577 104 41 0 30 133 11 114 1.15e-41 151
MsaG010279 AT2G16720.1 60.577 104 41 0 31 134 12 115 1.21e-41 149
MsaG010279 AT5G49330.1 57.273 110 47 0 28 137 9 118 1.32e-41 151
MsaG010279 AT3G13890.2 60.577 104 41 0 31 134 12 115 1.43e-41 152
MsaG010279 AT5G07700.1 48.921 139 54 1 30 168 11 132 1.57e-41 151
MsaG010279 AT5G07700.2 48.921 139 54 1 30 168 11 132 1.57e-41 151
MsaG010279 AT5G40350.1 58.252 103 43 0 31 133 17 119 1.98e-41 147
MsaG010279 AT1G66230.1 57.798 109 46 0 28 136 9 117 2.02e-41 149
MsaG010279 AT1G06180.1 57.944 107 45 0 28 134 9 115 2.09e-41 148
MsaG010279 AT5G61420.2 60.000 105 42 0 30 134 11 115 2.52e-41 151
MsaG010279 AT3G12720.1 60.577 104 41 0 31 134 22 125 2.97e-41 149
MsaG010279 AT3G08500.1 58.491 106 44 0 31 136 30 135 4.23e-41 150
MsaG010279 AT3G24310.1 59.259 108 44 0 30 137 17 124 5.66e-41 147
MsaG010279 AT5G14750.1 57.282 103 44 0 32 134 17 119 6.22e-41 145
MsaG010279 AT3G30210.1 59.259 108 44 0 30 137 26 133 7.92e-41 147
MsaG010279 AT5G52600.1 50.735 136 56 2 26 156 7 136 9.58e-41 145
MsaG010279 AT1G09540.1 53.488 129 57 2 31 156 12 140 1.08e-40 149
MsaG010279 AT4G34990.1 61.765 102 39 0 33 134 14 115 3.24e-40 145
MsaG010279 AT5G56110.1 55.752 113 49 1 31 143 12 123 3.88e-40 147
MsaG010279 AT5G40330.1 54.206 107 49 0 32 138 13 119 5.57e-40 143
MsaG010279 AT5G57620.1 55.556 108 47 1 28 134 9 116 1.16e-39 146
MsaG010279 AT4G37780.1 55.556 108 47 1 28 134 9 116 1.43e-39 145
MsaG010279 AT5G16600.1 57.798 109 46 0 28 136 9 117 1.43e-39 145
MsaG010279 AT1G48000.1 55.340 103 46 0 31 133 32 134 2.14e-39 142
MsaG010279 AT2G47460.1 55.140 107 48 0 28 134 9 115 2.66e-39 146
MsaG010279 AT4G01680.2 55.085 118 41 1 31 136 12 129 3.07e-39 145
MsaG010279 AT3G27920.1 56.311 103 45 0 32 134 15 117 3.84e-39 141
MsaG010279 AT1G63910.1 56.604 106 46 0 31 136 12 117 4.04e-39 145
MsaG010279 AT1G74080.1 59.615 104 42 0 30 133 11 114 4.61e-39 144
MsaG010279 AT5G62320.1 44.516 155 77 3 29 174 11 165 4.85e-39 142
MsaG010279 AT4G22680.1 56.075 107 47 0 28 134 9 115 6.29e-39 142
MsaG010279 AT5G35550.1 55.140 107 48 0 28 134 11 117 6.35e-39 142
MsaG010279 AT3G62610.1 54.206 107 49 0 28 134 9 115 7.91e-39 144
MsaG010279 AT1G74430.1 56.757 111 45 1 24 134 8 115 7.92e-39 142
MsaG010279 AT5G23000.1 55.556 108 47 1 28 134 9 116 8.46e-39 144
MsaG010279 AT3G13890.1 55.752 113 41 1 31 134 12 124 1.11e-38 144
MsaG010279 AT1G68320.1 52.830 106 50 0 31 136 19 124 2.01e-38 141
MsaG010279 AT1G25340.1 53.333 105 49 0 32 136 19 123 2.76e-38 141
MsaG010279 AT3G49690.1 56.481 108 46 1 28 134 9 116 4.34e-38 141
MsaG010279 AT5G65790.1 55.556 108 47 1 28 134 9 116 8.54e-38 142
MsaG010279 AT1G79180.2 46.429 140 42 1 28 134 11 150 1.20e-37 140
MsaG010279 AT3G46130.1 51.304 115 55 1 30 143 8 122 1.36e-37 138
MsaG010279 AT5G59780.3 52.212 113 53 1 32 143 9 121 1.48e-37 137
MsaG010279 AT1G18710.1 54.701 117 49 2 24 139 8 121 1.87e-37 138
MsaG010279 AT4G12350.1 55.769 104 46 0 31 134 12 115 1.91e-37 139
MsaG010279 AT3G12820.1 55.140 107 48 0 28 134 11 117 2.03e-37 137
MsaG010279 AT5G14340.1 53.211 109 51 0 28 136 21 129 2.81e-37 138
MsaG010279 AT2G47190.1 50.943 106 52 0 31 136 20 125 7.94e-37 137
MsaG010279 AT3G60460.1 56.075 107 46 1 31 136 11 117 1.03e-36 137
MsaG010279 AT2G36890.1 48.413 126 62 2 28 152 9 132 3.98e-36 135
MsaG010279 AT2G36890.2 45.324 139 73 2 15 152 37 173 7.40e-36 136
MsaG010279 AT3G28470.1 55.882 102 45 0 28 129 9 110 1.75e-35 134
MsaG010279 AT3G53200.1 50.877 114 56 0 24 137 2 115 1.49e-34 129
MsaG010279 AT1G25340.2 50.476 105 47 1 32 136 19 118 4.21e-34 129
MsaG010279 AT3G48920.1 47.826 115 60 0 19 133 6 120 7.68e-34 128
MsaG010279 AT1G25340.3 50.476 105 47 1 32 136 19 118 8.82e-34 129
MsaG010279 AT5G52260.1 53.043 115 54 0 32 146 13 127 1.54e-33 127
MsaG010279 AT5G26660.2 58.333 96 33 2 64 152 14 109 2.67e-33 128
MsaG010279 AT1G66370.1 46.226 106 57 0 30 135 7 112 6.37e-33 125
MsaG010279 AT3G06490.1 48.780 123 52 1 11 133 10 121 8.95e-33 127
MsaG010279 AT5G49620.1 33.333 261 145 6 25 264 20 272 2.55e-32 125
MsaG010279 AT4G25560.1 50.485 103 51 0 32 134 11 113 5.20e-31 121
MsaG010279 AT1G66380.1 48.113 106 55 0 30 135 7 112 1.23e-29 113
MsaG010279 AT1G56650.1 44.444 126 58 1 30 143 7 132 3.02e-29 115
MsaG010279 AT5G49620.2 31.636 275 145 7 25 264 20 286 9.93e-29 115
MsaG010279 AT4G18770.1 50.459 109 50 3 28 135 212 317 2.73e-28 116
MsaG010279 AT4G37260.1 52.941 102 47 1 33 134 13 113 3.17e-28 114
MsaG010279 AT3G09230.1 53.922 102 46 1 33 134 55 155 3.65e-28 115
MsaG010279 AT5G58850.1 51.887 106 47 3 31 135 103 205 4.09e-28 116
MsaG010279 AT3G27810.2 62.857 70 26 0 64 133 4 73 4.48e-28 110
MsaG010279 AT5G40360.1 48.214 112 57 1 22 133 147 257 5.42e-28 114
MsaG010279 AT1G66390.1 47.170 106 56 0 30 135 7 112 7.27e-28 111
MsaG010279 AT3G27785.1 48.214 112 52 3 28 137 184 291 8.55e-28 115
MsaG010279 AT3G12820.2 65.217 69 24 0 66 134 1 69 1.69e-27 108
MsaG010279 AT3G55730.1 52.427 103 46 2 33 134 56 156 1.75e-27 114
MsaG010279 AT5G11050.1 52.885 104 45 3 33 135 105 205 2.49e-27 114
MsaG010279 AT2G23290.1 52.941 102 47 1 33 134 13 113 2.55e-27 111
MsaG010279 AT5G14750.3 59.420 69 28 0 66 134 17 85 6.31e-27 106
MsaG010279 AT2G39880.1 51.327 113 49 3 26 134 40 150 6.53e-27 111
MsaG010279 AT5G40350.2 59.722 72 29 0 62 133 3 74 6.91e-27 106
MsaG010279 AT3G46130.3 54.118 85 38 1 60 143 6 90 7.00e-27 108
MsaG010279 AT3G53200.2 62.162 74 28 0 64 137 9 82 1.07e-26 107
MsaG010279 AT1G69560.1 38.095 168 87 5 27 181 101 264 2.55e-26 109
MsaG010279 AT1G69560.2 38.095 168 87 5 27 181 117 280 3.35e-26 109
MsaG010279 AT5G59780.2 55.556 81 35 1 64 143 20 100 3.36e-26 106
MsaG010279 AT3G46130.4 55.556 81 35 1 64 143 20 100 4.02e-26 106
MsaG010279 AT3G47600.2 60.274 73 29 0 64 136 39 111 5.15e-26 108
MsaG010279 AT5G67300.1 50.980 102 49 1 33 134 6 106 6.81e-26 107
MsaG010279 AT5G35550.2 61.972 71 27 0 64 134 50 120 1.14e-25 105
MsaG010279 AT3G50060.1 46.789 109 57 1 33 141 6 113 2.84e-25 105
MsaG010279 AT2G25230.1 48.246 114 54 3 28 138 21 132 3.44e-25 103
MsaG010279 AT1G17950.1 36.364 165 88 4 33 190 5 159 8.49e-25 103
MsaG010279 AT5G17800.1 49.038 104 52 1 33 136 93 195 1.16e-24 104
MsaG010279 AT1G26780.1 46.729 107 54 2 31 136 96 200 1.20e-24 103
MsaG010279 AT1G26780.2 46.729 107 54 2 31 136 96 200 1.51e-24 105
MsaG010279 AT5G02320.1 47.115 104 54 1 31 134 125 227 8.42e-24 104
MsaG010279 AT5G02320.2 47.115 104 54 1 31 134 125 227 8.42e-24 104
MsaG010279 AT5G02320.3 47.115 104 54 1 31 134 65 167 9.41e-24 104
MsaG010279 AT3G09370.1 47.115 104 54 1 31 134 128 230 1.26e-23 103
MsaG010279 AT4G33450.1 45.714 105 56 1 32 136 18 121 1.27e-23 100
MsaG010279 AT3G09370.2 47.115 104 54 1 31 134 133 235 1.34e-23 103
MsaG010279 AT3G09370.3 47.115 104 54 1 31 134 141 243 1.89e-23 103
MsaG010279 AT3G29020.1 42.373 118 67 1 33 150 65 181 1.25e-22 96.7
MsaG010279 AT3G29020.2 46.154 104 55 1 33 136 67 169 1.51e-22 98.2
MsaG010279 AT5G11510.3 37.500 128 64 3 31 145 79 203 2.27e-22 101
MsaG010279 AT5G11510.1 37.500 128 64 3 31 145 79 203 2.27e-22 101
MsaG010279 AT5G11510.4 37.500 128 64 3 31 145 79 203 2.27e-22 101
MsaG010279 AT5G11510.2 37.500 128 64 3 31 145 79 203 2.42e-22 100
MsaG010279 AT5G11510.5 37.500 128 64 3 31 145 79 203 2.75e-22 100
MsaG010279 AT4G32730.5 43.810 105 56 2 31 134 85 187 5.19e-22 100
MsaG010279 AT4G32730.5 30.894 123 75 3 18 131 12 133 2.37e-11 66.6
MsaG010279 AT4G32730.4 43.810 105 56 2 31 134 85 187 5.19e-22 100
MsaG010279 AT4G32730.4 30.894 123 75 3 18 131 12 133 2.37e-11 66.6
MsaG010279 AT4G32730.3 43.810 105 56 2 31 134 85 187 5.19e-22 100
MsaG010279 AT4G32730.3 30.894 123 75 3 18 131 12 133 2.37e-11 66.6
MsaG010279 AT4G32730.2 43.810 105 56 2 31 134 85 187 5.19e-22 100
MsaG010279 AT4G32730.2 30.894 123 75 3 18 131 12 133 2.37e-11 66.6
MsaG010279 AT4G32730.1 43.810 105 56 2 31 134 85 187 5.94e-22 99.8
MsaG010279 AT4G32730.1 30.894 123 75 3 18 131 12 133 2.45e-11 66.6
MsaG010279 AT5G40430.1 44.954 109 56 3 28 135 49 154 2.00e-21 94.0
MsaG010279 AT1G18960.1 42.157 102 56 2 33 134 10 108 1.20e-20 92.8
MsaG010279 AT1G22640.3 64.912 57 20 0 78 134 2 58 1.62e-20 89.7
MsaG010279 AT1G73410.1 45.714 105 54 2 33 136 6 108 2.42e-20 90.5
MsaG010279 AT1G73410.2 45.714 105 54 2 33 136 6 108 4.93e-20 88.6
MsaG010279 AT4G00540.2 40.000 130 67 5 31 156 101 223 1.05e-19 91.3
MsaG010279 AT4G00540.1 40.000 130 67 5 31 156 99 221 1.89e-19 90.9
MsaG010279 AT2G37630.1 40.777 103 59 1 36 136 7 109 2.34e-19 89.7
MsaG010279 AT1G66380.2 48.101 79 41 0 30 108 7 85 1.40e-18 81.6
MsaG010279 AT3G23250.2 53.030 66 31 0 78 143 2 67 2.26e-18 84.3
MsaG010279 AT1G66380.3 51.389 72 35 0 64 135 8 79 2.57e-18 80.9
MsaG010279 AT5G14750.4 51.724 58 28 0 77 134 1 58 1.16e-17 80.1
MsaG010279 AT5G14750.2 51.724 58 28 0 77 134 1 58 1.16e-17 80.1
MsaG010279 AT1G71030.2 50.769 65 32 0 70 134 5 69 1.44e-17 80.9
MsaG010279 AT1G71030.1 50.769 65 32 0 70 134 19 83 2.36e-17 80.9
MsaG010279 AT5G39700.1 38.835 103 62 1 34 136 57 158 1.59e-15 75.5
MsaG010279 AT1G14350.2 34.653 101 65 1 36 136 28 127 4.43e-15 77.4
MsaG010279 AT1G14350.1 34.653 101 65 1 36 136 28 127 4.43e-15 77.4
MsaG010279 AT5G59780.1 52.830 53 24 1 92 143 4 56 5.81e-14 70.1
MsaG010279 AT3G46130.2 52.830 53 24 1 92 143 4 56 5.86e-14 70.9
MsaG010279 AT2G02820.2 33.663 101 66 1 36 136 33 132 6.32e-14 74.3
MsaG010279 AT2G02820.1 33.663 101 66 1 36 136 33 132 7.31e-14 73.9
MsaG010279 AT2G02820.3 33.663 101 66 1 36 136 33 132 9.88e-14 72.8
MsaG010279 AT4G25560.2 54.348 46 21 0 89 134 2 47 1.33e-11 64.7

Find 84 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGCTTCTGCTTGGATTTC+TGG 0.073897 2:-71111162 None:intergenic
TTTGGATCATCAAGCTTCTT+AGG 0.195128 2:-71111273 None:intergenic
CTTGGACTCTTGGATCAAAT+TGG 0.197441 2:+71113183 MsaT010279.1:CDS
CACTTGGAGGAGTAAAATTT+TGG 0.220402 2:-71111470 None:intergenic
ATCAATATTCTTCTTCTTCA+TGG 0.223117 2:-71111829 None:intergenic
TCTGAGGCCGAATCTTAAAA+AGG 0.253808 2:+71110134 MsaT010279.1:CDS
AATTCTGTTCAGAAGAATTC+AGG 0.273502 2:+71110066 MsaT010279.1:CDS
GAGTGAGGATTCAACATATA+AGG 0.274150 2:+71111743 MsaT010279.1:CDS
GTGGAGGATTATAATCATAA+TGG 0.331864 2:-71111296 None:intergenic
GATTTCGTTATCCGTTCTTC+CGG 0.343808 2:-71111079 None:intergenic
TTTCCTCTACAATACCATTC+AGG 0.359442 2:-71113086 None:intergenic
TACAATGTACGATGATGATT+TGG 0.360685 2:+71113025 MsaT010279.1:CDS
ATGCTAAGCTTGGAAACAAA+TGG 0.376788 2:+71110199 MsaT010279.1:CDS
AGTGAGGATTCAACATATAA+GGG 0.377482 2:+71111744 MsaT010279.1:CDS
ATAAGCATGGTGAAGGGAAT+TGG 0.394291 2:+71110043 MsaT010279.1:CDS
AGAAGAATTCAGGGTTGTTA+AGG 0.397982 2:+71110076 MsaT010279.1:CDS
GATAATGATGAAGAAGATAA+AGG 0.400820 2:-71111222 None:intergenic
GGATTATAATCATAATGGTT+TGG 0.404494 2:-71111291 None:intergenic
AGCACTTCTGACTTGTCAAC+AGG 0.420258 2:+71111873 MsaT010279.1:CDS
AAGTATTTCTTGCAATGATA+AGG 0.422893 2:+71111716 MsaT010279.1:CDS
TTGGATCATCAAGCTTCTTA+GGG 0.426338 2:-71111272 None:intergenic
CAGAAATACCAATGCCTGAA+TGG 0.436225 2:+71113072 MsaT010279.1:CDS
TCTTATGCTAGTGGTGTTGA+TGG 0.439295 2:+71111585 MsaT010279.1:CDS
ATTTCGTTATCCGTTCTTCC+GGG 0.441112 2:-71111078 None:intergenic
GTCAATATCATGTCTTCATG+TGG 0.443411 2:-71110009 None:intergenic
ATTGAACTTCATGCTAAGCT+TGG 0.449185 2:+71110189 MsaT010279.1:CDS
ACAGATGAAGCTTCTTCATC+AGG 0.458538 2:+71113137 MsaT010279.1:CDS
AAAGAGGTAAGCCGGCTCTC+TGG 0.465512 2:-71111134 None:intergenic
TCAATATCATGTCTTCATGT+GGG 0.466229 2:-71110008 None:intergenic
AAAATATTTGATGATGAAGA+TGG 0.472018 2:-71111444 None:intergenic
TGTATACAATAGCTTCTGCT+TGG 0.475892 2:-71111170 None:intergenic
TCTACCTCATCCTCCTGGAC+TGG 0.477523 2:-71112993 None:intergenic
GCTCTTCTACCTCATCCTCC+TGG 0.484558 2:-71112998 None:intergenic
TGGATTTCTGGAGGATAAAG+AGG 0.488603 2:-71111150 None:intergenic
CTACAATACCATTCAGGCAT+TGG 0.496175 2:-71113080 None:intergenic
TGCTAAGCTTGGAAACAAAT+GGG 0.499535 2:+71110200 MsaT010279.1:CDS
GAAACCAGTCCAGGAGGATG+AGG 0.500476 2:+71112989 MsaT010279.1:CDS
AGGGGAGTGTATCTCATAAG+AGG 0.503168 2:+71111763 MsaT010279.1:CDS
ATGAAAAGGCGCCAGAGAGC+CGG 0.508753 2:+71111123 MsaT010279.1:CDS
TGCTAGAACTGGCATGAAGA+AGG 0.510021 2:+71109975 MsaT010279.1:CDS
ATTCTGTTCAGAAGAATTCA+GGG 0.511701 2:+71110067 MsaT010279.1:CDS
GATGATGTTGATGCTAGAAC+TGG 0.512381 2:+71109964 MsaT010279.1:CDS
ATTGAATTGTGGACATGGAT+TGG 0.513092 2:-71111349 None:intergenic
AGCTCAAATTAACATATGCC+AGG 0.514252 2:-71113215 None:intergenic
AACAGGGAAGAAACCAGTCC+AGG 0.517670 2:+71112980 MsaT010279.1:intron
GATGAAGAAGCTTCATCTGT+TGG 0.520671 2:-71113134 None:intergenic
TTTGGAACACGAGAATGAAA+AGG 0.528884 2:+71111109 MsaT010279.1:CDS
ATGGGCTCGAATGGCTACTC+AGG 0.532475 2:+71110218 MsaT010279.1:CDS
TTCAGGCATTGGTATTTCTG+AGG 0.536319 2:-71113069 None:intergenic
TTTGATGATGAAGATGGATA+AGG 0.537656 2:-71111438 None:intergenic
TGGAAACAAATGGGCTCGAA+TGG 0.540299 2:+71110209 MsaT010279.1:CDS
AATTTGAGCTATGATCATCA+TGG 0.543232 2:+71111519 MsaT010279.1:CDS
TCAGGCATTGGTATTTCTGA+GGG 0.549426 2:-71113068 None:intergenic
CCTGCTTCATCTTATGCTAG+TGG 0.552340 2:+71111576 MsaT010279.1:CDS
AATTCAGGGTTGTTAAGGTG+TGG 0.555944 2:+71110081 MsaT010279.1:CDS
TACGTGAATAAGCATGGTGA+AGG 0.559829 2:+71110036 MsaT010279.1:CDS
TCAAATTGGAACAACATGCC+TGG 0.562362 2:+71113197 MsaT010279.1:CDS
ATGTCTTCATGTGGGGTCCA+CGG 0.564144 2:-71110000 None:intergenic
GATCATCATGGATTCAATGC+AGG 0.564153 2:+71111531 MsaT010279.1:CDS
TGGAGGATAAAGAGGTAAGC+CGG 0.581750 2:-71111142 None:intergenic
ATAAGATGAAGCAGGAGTCT+CGG 0.582102 2:-71111568 None:intergenic
GTTGCACCATTATCCCATGA+AGG 0.584848 2:+71111651 MsaT010279.1:CDS
CAATATCATGTCTTCATGTG+GGG 0.586648 2:-71110007 None:intergenic
GCTAGAACTGGCATGAAGAA+GGG 0.588004 2:+71109976 MsaT010279.1:CDS
TAATCATGTGAATCACTTGG+AGG 0.595476 2:-71111483 None:intergenic
GCTTCTGCTTGGATTTCTGG+AGG 0.596988 2:-71111159 None:intergenic
CCACTAGCATAAGATGAAGC+AGG 0.600787 2:-71111576 None:intergenic
CAACAACAATAATAATGTTG+AGG 0.608078 2:+71109921 MsaT010279.1:CDS
TGGTAATCATGTGAATCACT+TGG 0.611434 2:-71111486 None:intergenic
ATCTCATAAGAGGAAAAGCA+TGG 0.612251 2:+71111773 MsaT010279.1:CDS
ATGCCTGAATGGTATTGTAG+AGG 0.615840 2:+71113083 MsaT010279.1:CDS
ACAGAGTACGTGAATAAGCA+TGG 0.627357 2:+71110030 MsaT010279.1:CDS
GTGAGGATTCAACATATAAG+GGG 0.637554 2:+71111745 MsaT010279.1:CDS
CAATGATAAGGCTAAGAGTG+AGG 0.639074 2:+71111728 MsaT010279.1:CDS
GGAGGTTGAAGAACATGCAG+AGG 0.643025 2:+71111794 MsaT010279.1:CDS
ACTGTTGGATGATCTTGTGA+TGG 0.646187 2:+71111686 MsaT010279.1:CDS
GATGAAGCTTCTTCATCAGG+TGG 0.646512 2:+71113140 MsaT010279.1:CDS
TTGGATGATCTTGTGATGGA+AGG 0.650221 2:+71111690 MsaT010279.1:CDS
TTAGATGGGCGAATCATCTG+AGG 0.651365 2:+71110118 MsaT010279.1:CDS
ACGTGAATAAGCATGGTGAA+GGG 0.654969 2:+71110037 MsaT010279.1:CDS
AGGGAAGAAACCAGTCCAGG+AGG 0.678582 2:+71112983 MsaT010279.1:intron
GATGGATAAGGTGAAAGTGA+AGG 0.689302 2:-71111426 None:intergenic
CTGGCATGAAGAAGGGACCG+TGG 0.703399 2:+71109983 MsaT010279.1:CDS
TCATAAGAGGAAAAGCATGG+AGG 0.742631 2:+71111776 MsaT010279.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 71109898 71113229 71109898 ID=MsaG010279
Chr2 mRNA 71109898 71113229 71109898 ID=MsaT010279.1;Parent=MsaG010279
Chr2 exon 71109898 71110239 71109898 ID=MsaT010279.1.exon1;Parent=MsaT010279.1
Chr2 CDS 71109898 71110239 71109898 ID=cds.MsaT010279.1;Parent=MsaT010279.1
Chr2 exon 71111075 71111894 71111075 ID=MsaT010279.1.exon2;Parent=MsaT010279.1
Chr2 CDS 71111075 71111894 71111075 ID=cds.MsaT010279.1;Parent=MsaT010279.1
Chr2 exon 71112985 71113229 71112985 ID=MsaT010279.1.exon3;Parent=MsaT010279.1
Chr2 CDS 71112985 71113229 71112985 ID=cds.MsaT010279.1;Parent=MsaT010279.1
Gene Sequence

>MsaT010279.1

ATGGCGAACATCAAAATCAACGACAACAACAATAATAATGTTGAGGTTGACATTGACTCGTCAAAAGATGATGTTGATGCTAGAACTGGCATGAAGAAGGGACCGTGGACCCCACATGAAGACATGATATTGACAGAGTACGTGAATAAGCATGGTGAAGGGAATTGGAATTCTGTTCAGAAGAATTCAGGGTTGTTAAGGTGTGGAAAAAGCTGCAGACTTAGATGGGCGAATCATCTGAGGCCGAATCTTAAAAAGGGTTCATTTTCCGAAGAGGAAGAAAAAATCATCATTGAACTTCATGCTAAGCTTGGAAACAAATGGGCTCGAATGGCTACTCAGTTGCCCGGAAGAACGGATAACGAAATCAAAAACTTTTGGAACACGAGAATGAAAAGGCGCCAGAGAGCCGGCTTACCTCTTTATCCTCCAGAAATCCAAGCAGAAGCTATTGTATACAATGATAAACTATTGCAACTACAACATGAACCTTTATCTTCTTCATCATTATCATTTTCTTTACTCTTATCTTCTTGTTACCCTAAGAAGCTTGATGATCCAAACCATTATGATTATAATCCTCCACAAAACAATTCTGATTCTTCTAATCACTACACCAATCCATGTCCACAATTCAATTTTTCCAATGAAGAAAACATTGAGATTAATGAAACTCTTGTTTTGCAAAAATCACCTTCACTTTCACCTTATCCATCTTCATCATCAAATATTTTCAACCAAAATTTTACTCCTCCAAGTGATTCACATGATTACCAATATTCTGAAAATTTGAGCTATGATCATCATGGATTCAATGCAGGATCTCTGTATGATTCCGAGACTCCTGCTTCATCTTATGCTAGTGGTGTTGATGGTAATTTTATGGGAAATTCTAGCATGGTTAATGATTACTATAAAGTTGCACCATTATCCCATGAAGGAAAAAATAGTGGACTGTTGGATGATCTTGTGATGGAAGGTAGAAGTATTTCTTGCAATGATAAGGCTAAGAGTGAGGATTCAACATATAAGGGGAGTGTATCTCATAAGAGGAAAAGCATGGAGGTTGAAGAACATGCAGAGGAAGAAAGTTTTTCCATGAAGAAGAAGAATATTGATGCGATTCAGAAGAAAGATTTCAGCACTTCTGACTTGTCAACAGGGAAGAAACCAGTCCAGGAGGATGAGGTAGAAGAGCTGAATACAATGTACGATGATGATTTGGATTGCTTGCTCAACAATTTTCCCTCAGAAATACCAATGCCTGAATGGTATTGTAGAGGAAAAAGTCAGTCATTGGGAACTGAAACTCCAACAGATGAAGCTTCTTCATCAGGTGGTCCCACCAATCAAAAATTTGCTTGGACTCTTGGATCAAATTGGAACAACATGCCTGGCATATGTTAA
Protein sequence

>MsaT010279.1

MANIKINDNNNNNVEVDIDSSKDDVDARTGMKKGPWTPHEDMILTEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFSEEEEKIIIELHAKLGNKWARMATQLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEIQAEAIVYNDKLLQLQHEPLSSSSLSFSLLLSSCYPKKLDDPNHYDYNPPQNNSDSSNHYTNPCPQFNFSNEENIEINETLVLQKSPSLSPYPSSSSNIFNQNFTPPSDSHDYQYSENLSYDHHGFNAGSLYDSETPASSYASGVDGNFMGNSSMVNDYYKVAPLSHEGKNSGLLDDLVMEGRSISCNDKAKSEDSTYKGSVSHKRKSMEVEEHAEEESFSMKKKNIDAIQKKDFSTSDLSTGKKPVQEDEVEELNTMYDDDLDCLLNNFPSEIPMPEWYCRGKSQSLGTETPTDEASSSGGPTNQKFAWTLGSNWNNMPGIC*