AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG010337


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010337 MtrunA17_Chr2g0323331 66.746 418 39 7 87 457 5 369 1.10e-177 501
MsaG010337 MtrunA17_Chr2g0323351 68.142 226 54 6 1 211 1 223 5.75e-99 296
MsaG010337 MtrunA17_Chr2g0323351 55.882 102 31 4 214 311 137 228 5.74e-15 74.7
MsaG010337 MtrunA17_Chr2g0323351 43.038 158 30 7 302 454 146 248 1.63e-13 70.5
MsaG010337 MtrunA17_Chr4g0022901 50.201 249 86 6 1 212 1 248 8.44e-77 241
MsaG010337 MtrunA17_Chr4g0022931 46.071 280 102 7 1 258 1 253 1.41e-68 219
MsaG010337 MtrunA17_Chr4g0022911 51.980 202 89 3 1 200 1 196 3.86e-67 216
MsaG010337 MtrunA17_Chr2g0323321 91.209 91 8 0 1 91 1 91 1.47e-62 198
MsaG010337 MtrunA17_Chr4g0022881 46.083 217 101 5 1 209 1 209 2.03e-56 186
MsaG010337 MtrunA17_Chr1g0167691 44.541 229 94 5 1 218 1 207 8.81e-55 183
MsaG010337 MtrunA17_Chr1g0187761 46.512 215 93 5 1 209 1 199 2.34e-54 182
MsaG010337 MtrunA17_Chr1g0167661 48.341 211 84 6 1 202 1 195 6.08e-54 181
MsaG010337 MtrunA17_Chr4g0022891 44.690 226 99 9 1 209 1 217 6.38e-54 180
MsaG010337 MtrunA17_Chr2g0281071 65.546 119 39 1 1 117 1 119 1.45e-51 177
MsaG010337 MtrunA17_Chr4g0048511 63.866 119 41 1 1 117 1 119 3.91e-51 177
MsaG010337 MtrunA17_Chr7g0261281 59.259 135 49 2 1 129 1 135 3.52e-50 172
MsaG010337 MtrunA17_Chr7g0274581 63.025 119 43 1 1 118 1 119 5.86e-50 169
MsaG010337 MtrunA17_Chr3g0115821 61.864 118 44 1 1 117 1 118 6.23e-50 173
MsaG010337 MtrunA17_Chr2g0323411 63.559 118 42 1 1 117 1 118 5.31e-49 170
MsaG010337 MtrunA17_Chr6g0453471 63.559 118 42 1 1 117 1 118 1.28e-48 170
MsaG010337 MtrunA17_Chr4g0042671 63.559 118 42 1 1 117 1 118 2.99e-48 170
MsaG010337 MtrunA17_Chr1g0203411 50.980 153 69 2 1 147 1 153 4.83e-48 167
MsaG010337 MtrunA17_Chr7g0217741 63.559 118 42 1 1 117 1 118 5.26e-48 167
MsaG010337 MtrunA17_Chr4g0057031 61.864 118 44 1 1 117 1 118 2.02e-47 164
MsaG010337 MtrunA17_Chr1g0211161 64.486 107 38 0 11 117 13 119 2.27e-47 163
MsaG010337 MtrunA17_Chr4g0058631 39.583 240 130 5 6 245 7 231 2.39e-47 167
MsaG010337 MtrunA17_Chr4g0039971 60.169 118 46 1 1 117 2 119 5.21e-47 166
MsaG010337 MtrunA17_Chr3g0117091 60.169 118 46 1 1 117 1 118 1.12e-46 164
MsaG010337 MtrunA17_Chr1g0193371 53.061 147 59 2 6 152 7 143 1.21e-46 165
MsaG010337 MtrunA17_Chr5g0410961 60.169 118 46 1 1 117 1 118 1.35e-46 164
MsaG010337 MtrunA17_Chr4g0070611 49.112 169 73 2 1 156 1 169 2.95e-46 162
MsaG010337 MtrunA17_Chr8g0349261 63.025 119 41 2 1 116 1 119 2.96e-46 162
MsaG010337 MtrunA17_Chr3g0110351 61.864 118 44 1 1 117 1 118 4.34e-46 162
MsaG010337 MtrunA17_Chr5g0395281 59.322 118 47 1 1 117 1 118 4.56e-46 162
MsaG010337 MtrunA17_Chr7g0228891 60.345 116 45 1 1 115 1 116 8.19e-46 160
MsaG010337 MtrunA17_Chr4g0068061 60.656 122 47 1 1 121 1 122 1.25e-45 161
MsaG010337 MtrunA17_Chr3g0103281 58.621 116 47 1 1 115 1 116 1.45e-45 161
MsaG010337 MtrunA17_Chr5g0434571 61.017 118 45 1 1 117 37 154 1.62e-45 162
MsaG010337 MtrunA17_Chr4g0037141 58.120 117 48 1 1 116 1 117 2.34e-45 159
MsaG010337 MtrunA17_Chr5g0435101 58.120 117 49 0 1 117 1 117 3.80e-45 156
MsaG010337 MtrunA17_Chr8g0346561 59.016 122 49 1 1 121 1 122 6.96e-45 158
MsaG010337 MtrunA17_Chr1g0193801 60.909 110 43 0 6 115 7 116 1.18e-44 160
MsaG010337 MtrunA17_Chr2g0309911 59.459 111 45 0 6 116 6 116 1.41e-44 158
MsaG010337 MtrunA17_Chr8g0342541 58.559 111 46 0 6 116 7 117 1.51e-44 159
MsaG010337 MtrunA17_Chr4g0070641 60.345 116 45 1 1 115 1 116 1.56e-44 153
MsaG010337 MtrunA17_Chr7g0270891 60.909 110 43 0 6 115 7 116 1.73e-44 159
MsaG010337 MtrunA17_Chr3g0131121 58.621 116 47 1 1 115 1 116 3.35e-44 156
MsaG010337 MtrunA17_Chr7g0275911 58.621 116 47 1 1 115 1 116 5.46e-44 155
MsaG010337 MtrunA17_Chr2g0311221 63.889 108 38 1 3 109 5 112 5.61e-44 157
MsaG010337 MtrunA17_Chr8g0342521 57.658 111 47 0 6 116 7 117 7.22e-44 157
MsaG010337 MtrunA17_Chr2g0330041 58.559 111 46 0 6 116 7 117 1.01e-43 158
MsaG010337 MtrunA17_Chr7g0217221 58.824 119 48 1 1 118 1 119 1.26e-43 154
MsaG010337 MtrunA17_Chr5g0417821 62.963 108 40 0 10 117 6 113 2.21e-43 154
MsaG010337 MtrunA17_Chr4g0044421 63.810 105 38 0 13 117 14 118 5.42e-43 150
MsaG010337 MtrunA17_Chr2g0328771 62.162 111 41 1 11 121 20 129 5.77e-43 154
MsaG010337 MtrunA17_Chr3g0121241 58.559 111 46 0 6 116 37 147 7.91e-43 153
MsaG010337 MtrunA17_Chr8g0385321 56.897 116 49 1 1 115 1 116 9.16e-43 153
MsaG010337 MtrunA17_Chr1g0152011 43.114 167 90 4 1 165 1 164 1.61e-42 153
MsaG010337 MtrunA17_Chr6g0452271 55.932 118 51 1 1 117 1 118 2.02e-42 153
MsaG010337 MtrunA17_Chr3g0092401 58.475 118 48 1 1 117 2 119 2.07e-42 152
MsaG010337 MtrunA17_Chr8g0342481 58.407 113 44 2 6 116 7 118 2.32e-42 154
MsaG010337 MtrunA17_Chr1g0151941 53.719 121 54 2 1 119 1 121 3.15e-42 150
MsaG010337 MtrunA17_Chr1g0194951 59.483 116 46 1 1 115 1 116 3.16e-42 153
MsaG010337 MtrunA17_Chr4g0032401 61.607 112 42 1 8 119 14 124 4.08e-42 152
MsaG010337 MtrunA17_Chr5g0400821 52.713 129 58 3 1 126 1 129 7.66e-42 150
MsaG010337 MtrunA17_Chr8g0387421 55.752 113 50 0 6 118 7 119 1.22e-41 150
MsaG010337 MtrunA17_Chr7g0271241 62.745 102 38 0 6 107 7 108 3.45e-41 150
MsaG010337 MtrunA17_Chr3g0088461 61.905 105 40 0 11 115 22 126 5.14e-41 149
MsaG010337 MtrunA17_Chr1g0180391 61.538 104 40 0 11 114 19 122 5.69e-41 146
MsaG010337 MtrunA17_Chr1g0203441 60.377 106 42 0 12 117 14 119 1.08e-40 146
MsaG010337 MtrunA17_Chr6g0453211 59.091 110 44 1 1 109 1 110 1.21e-40 147
MsaG010337 MtrunA17_Chr3g0135311 51.799 139 64 3 1 136 1 139 1.27e-40 148
MsaG010337 MtrunA17_Chr4g0060721 54.918 122 54 1 1 121 2 123 1.46e-40 148
MsaG010337 MtrunA17_Chr4g0028311 54.237 118 52 2 1 116 1 118 1.61e-40 147
MsaG010337 MtrunA17_Chr7g0264641 55.932 118 50 2 1 116 1 118 2.66e-40 145
MsaG010337 MtrunA17_Chr5g0397231 57.692 104 44 0 6 109 7 110 3.06e-40 147
MsaG010337 MtrunA17_Chr1g0209661 56.780 118 50 1 9 125 25 142 3.73e-40 146
MsaG010337 MtrunA17_Chr5g0434931 57.009 107 46 0 10 116 34 140 1.03e-39 144
MsaG010337 MtrunA17_Chr5g0434911 54.955 111 50 0 6 116 16 126 1.04e-39 144
MsaG010337 MtrunA17_Chr7g0254411 56.780 118 50 1 1 117 1 118 1.06e-39 145
MsaG010337 MtrunA17_Chr4g0055981 56.731 104 45 0 11 114 55 158 2.07e-39 142
MsaG010337 MtrunA17_Chr8g0343831 54.237 118 51 1 1 118 1 115 3.62e-39 142
MsaG010337 MtrunA17_Chr1g0186061 60.194 103 41 0 12 114 21 123 1.17e-38 140
MsaG010337 MtrunA17_Chr6g0470971 56.604 106 46 0 12 117 15 120 1.56e-38 141
MsaG010337 MtrunA17_Chr2g0327351 55.856 111 47 2 1 109 1 111 1.99e-38 142
MsaG010337 MtrunA17_Chr7g0228231 57.143 105 45 0 11 115 14 118 9.05e-38 137
MsaG010337 MtrunA17_Chr7g0228991 57.009 107 46 0 10 116 28 134 1.38e-37 138
MsaG010337 MtrunA17_Chr6g0487491 51.587 126 51 3 1 116 1 126 1.70e-37 137
MsaG010337 MtrunA17_Chr7g0240821 58.416 101 42 0 15 115 5 105 1.82e-37 136
MsaG010337 MtrunA17_Chr3g0099131 56.731 104 45 0 11 114 41 144 2.13e-37 143
MsaG010337 MtrunA17_Chr4g0054391 55.046 109 47 2 1 107 1 109 2.35e-37 138
MsaG010337 MtrunA17_Chr5g0434831 57.009 107 46 0 10 116 6 112 3.16e-37 134
MsaG010337 MtrunA17_Chr8g0360111 57.282 103 44 0 9 111 23 125 3.30e-37 137
MsaG010337 MtrunA17_Chr6g0450101 52.542 118 53 1 1 115 1 118 4.01e-37 135
MsaG010337 MtrunA17_Chr7g0269831 59.483 116 46 1 1 115 1 116 4.14e-37 139
MsaG010337 MtrunA17_Chr3g0080861 55.769 104 46 0 11 114 37 140 5.68e-37 142
MsaG010337 MtrunA17_Chr1g0168661 58.252 103 43 0 12 114 22 124 6.80e-37 136
MsaG010337 MtrunA17_Chr5g0434841 56.075 107 47 0 10 116 19 125 7.84e-37 137
MsaG010337 MtrunA17_Chr8g0354661 56.731 104 45 0 11 114 37 140 8.19e-37 142
MsaG010337 MtrunA17_Chr1g0194291 45.625 160 69 3 10 169 20 161 1.83e-36 135
MsaG010337 MtrunA17_Chr1g0154031 54.128 109 50 0 11 119 76 184 2.69e-36 138
MsaG010337 MtrunA17_Chr7g0220341 54.128 109 48 1 10 116 24 132 5.10e-36 134
MsaG010337 MtrunA17_Chr1g0194301 42.138 159 74 2 11 169 33 173 9.35e-36 133
MsaG010337 MtrunA17_Chr4g0072751 54.054 111 49 2 1 109 1 111 1.22e-35 135
MsaG010337 MtrunA17_Chr2g0327821 45.522 134 70 1 11 144 6 136 2.76e-34 128
MsaG010337 MtrunA17_Chr2g0322521 58.095 105 44 0 10 114 28 132 7.66e-34 131
MsaG010337 MtrunA17_Chr4g0042611 61.364 88 33 1 1 87 1 88 1.50e-33 121
MsaG010337 MtrunA17_Chr4g0030881 49.138 116 52 1 12 120 8 123 6.31e-33 125
MsaG010337 MtrunA17_Chr2g0294811 59.783 92 36 1 1 91 1 92 1.38e-32 120
MsaG010337 MtrunA17_Chr2g0293911 49.587 121 60 1 11 131 24 143 4.04e-32 125
MsaG010337 MtrunA17_Chr7g0247131 68.919 74 23 0 42 115 9 82 1.69e-31 121
MsaG010337 MtrunA17_Chr5g0395221 57.955 88 36 1 1 87 1 88 3.44e-31 115
MsaG010337 MtrunA17_Chr8g0342531 59.036 83 34 0 6 88 7 89 3.75e-31 117
MsaG010337 MtrunA17_Chr4g0068921 48.000 125 64 1 7 131 20 143 5.55e-31 118
MsaG010337 MtrunA17_Chr8g0342511 56.790 81 35 0 6 86 7 87 8.77e-31 114
MsaG010337 MtrunA17_Chr1g0192411 48.148 108 56 0 7 114 8 115 1.04e-30 122
MsaG010337 MtrunA17_Chr8g0334881 50.926 108 52 1 7 113 6 113 2.79e-30 119
MsaG010337 MtrunA17_Chr5g0429661 37.441 211 97 9 11 209 120 307 8.12e-30 119
MsaG010337 MtrunA17_Chr5g0440761 47.573 103 53 1 12 113 13 115 8.87e-30 117
MsaG010337 MtrunA17_Chr5g0441141 47.573 103 53 1 12 113 13 115 1.01e-29 117
MsaG010337 MtrunA17_Chr5g0440781 47.573 103 53 1 12 113 13 115 1.19e-29 114
MsaG010337 MtrunA17_Chr8g0342461 56.977 86 32 2 6 88 7 90 4.23e-29 111
MsaG010337 MtrunA17_Chr8g0342471 55.172 87 34 2 6 89 7 91 1.87e-28 109
MsaG010337 MtrunA17_Chr4g0008551 47.706 109 54 2 13 120 38 144 5.28e-28 114
MsaG010337 MtrunA17_Chr5g0441131 46.602 103 54 1 12 113 10 112 7.57e-28 109
MsaG010337 MtrunA17_Chr3g0133601 50.980 102 49 1 13 114 37 137 1.01e-27 110
MsaG010337 MtrunA17_Chr3g0099141 54.023 87 40 0 7 93 36 122 2.49e-27 106
MsaG010337 MtrunA17_Chr4g0053431 48.113 106 46 2 13 114 5 105 3.75e-27 109
MsaG010337 MtrunA17_Chr4g0013361 46.789 109 56 2 11 118 10 117 3.77e-27 110
MsaG010337 MtrunA17_Chr6g0454921 50.485 103 48 2 13 114 15 115 2.29e-26 105
MsaG010337 MtrunA17_Chr5g0434901 63.235 68 25 0 45 112 7 74 3.72e-26 102
MsaG010337 MtrunA17_Chr3g0117511 43.103 116 59 3 13 127 183 292 6.25e-26 109
MsaG010337 MtrunA17_Chr4g0042501 45.217 115 60 2 13 126 105 217 1.23e-25 108
MsaG010337 MtrunA17_Chr5g0417621 43.697 119 64 2 13 130 134 250 1.56e-25 108
MsaG010337 MtrunA17_Chr5g0401731 46.602 103 52 2 13 114 15 115 2.33e-25 106
MsaG010337 MtrunA17_Chr4g0058991 45.283 106 55 2 13 117 209 312 2.71e-25 107
MsaG010337 MtrunA17_Chr6g0480581 50.000 102 48 2 13 113 4 103 9.22e-25 102
MsaG010337 MtrunA17_Chr7g0228531 36.747 166 87 5 13 170 220 375 1.18e-24 105
MsaG010337 MtrunA17_Chr7g0229131 36.538 156 79 4 42 178 3 157 1.70e-24 99.8
MsaG010337 MtrunA17_Chr6g0453751 48.936 94 39 2 8 92 17 110 1.94e-24 98.2
MsaG010337 MtrunA17_Chr7g0229101 59.155 71 29 0 42 112 3 73 3.21e-24 100
MsaG010337 MtrunA17_Chr7g0238631 45.872 109 56 2 8 115 108 214 8.50e-24 104
MsaG010337 MtrunA17_Chr7g0238631 34.000 100 64 2 13 111 61 159 6.59e-13 70.9
MsaG010337 MtrunA17_Chr3g0139671 42.202 109 60 2 8 115 80 186 2.53e-22 100
MsaG010337 MtrunA17_Chr3g0139671 35.000 100 63 2 13 111 33 131 4.69e-13 71.6
MsaG010337 MtrunA17_Chr3g0125801 45.872 109 56 2 7 114 10 116 4.06e-22 96.3
MsaG010337 MtrunA17_Chr5g0437321 45.794 107 54 3 7 111 12 116 4.26e-22 95.9
MsaG010337 MtrunA17_Chr1g0157731 42.453 106 58 2 11 115 89 192 6.37e-22 99.4
MsaG010337 MtrunA17_Chr1g0157731 34.000 100 64 2 13 111 39 137 1.58e-13 73.2
MsaG010337 MtrunA17_Chr7g0228481 43.750 112 59 3 13 124 220 327 9.28e-22 97.4
MsaG010337 MtrunA17_Chr6g0460661 41.748 103 57 2 13 114 16 116 1.10e-21 91.7
MsaG010337 MtrunA17_Chr5g0425591 48.780 82 41 1 12 92 10 91 1.16e-21 89.4
MsaG010337 MtrunA17_Chr7g0254261 44.348 115 61 2 13 126 89 201 1.23e-21 95.9
MsaG010337 MtrunA17_Chr3g0093811 52.703 74 35 0 42 115 13 86 2.82e-21 93.2
MsaG010337 MtrunA17_Chr5g0397841 45.000 100 54 1 8 107 105 203 3.53e-20 92.8
MsaG010337 MtrunA17_Chr6g0460671 40.870 115 62 3 13 123 99 211 4.44e-20 91.3
MsaG010337 MtrunA17_Chr7g0233061 37.815 119 66 4 13 129 180 292 7.76e-20 90.9
MsaG010337 MtrunA17_Chr7g0228401 40.952 105 58 3 24 128 290 390 2.65e-19 90.5
MsaG010337 MtrunA17_Chr1g0177901 44.156 77 42 1 36 112 17 92 4.12e-17 80.1
MsaG010337 MtrunA17_Chr7g0238651 34.043 141 80 3 13 151 7 136 1.30e-16 81.3
MsaG010337 MtrunA17_Chr8g0362231 39.286 112 65 2 15 125 24 133 1.65e-15 78.6
MsaG010337 MtrunA17_Chr5g0416341 39.604 101 58 2 15 114 28 126 4.12e-15 77.4
MsaG010337 MtrunA17_Chr1g0193901 50.820 61 29 1 8 67 8 68 5.00e-14 68.2
MsaG010337 MtrunA17_Chr1g0193891 50.820 61 29 1 8 67 8 68 5.00e-14 68.2
MsaG010337 MtrunA17_Chr1g0193871 50.820 61 29 1 8 67 8 68 5.00e-14 68.2
MsaG010337 MtrunA17_Chr1g0193881 50.820 61 29 1 8 67 8 68 5.00e-14 68.2
MsaG010337 MtrunA17_Chr5g0434871 56.818 44 19 0 73 116 2 45 4.80e-13 64.3
MsaG010337 MtrunA17_Chr5g0421201 48.980 49 25 0 69 117 15 63 4.36e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010337 AT3G23250.1 42.601 223 106 5 1 202 1 222 7.20e-54 182
MsaG010337 AT2G31180.1 47.143 210 94 5 1 209 1 194 7.10e-52 176
MsaG010337 AT4G28110.1 63.559 118 42 1 1 117 1 118 1.17e-51 176
MsaG010337 AT5G16770.4 63.559 118 42 1 1 117 1 118 8.10e-51 175
MsaG010337 AT5G16770.3 63.559 118 42 1 1 117 1 118 8.10e-51 175
MsaG010337 AT5G16770.1 63.559 118 42 1 1 117 1 118 2.00e-50 174
MsaG010337 AT5G16770.2 63.559 118 42 1 1 117 1 118 2.00e-50 174
MsaG010337 AT5G15310.1 65.254 118 40 1 1 117 1 118 2.28e-50 174
MsaG010337 AT5G15310.2 65.254 118 40 1 1 117 1 118 3.04e-50 173
MsaG010337 AT4G21440.1 61.864 118 44 1 1 117 1 118 4.38e-50 174
MsaG010337 AT5G15310.4 65.254 118 40 1 1 117 1 118 5.50e-50 171
MsaG010337 AT3G01140.2 65.254 118 40 1 1 117 1 118 1.02e-49 173
MsaG010337 AT4G05100.1 63.025 119 42 1 1 117 1 119 2.63e-49 171
MsaG010337 AT5G07700.1 51.163 172 79 3 1 171 1 168 3.87e-49 171
MsaG010337 AT5G07700.2 51.163 172 79 3 1 171 1 168 3.87e-49 171
MsaG010337 AT1G06180.1 65.517 116 39 1 1 115 1 116 5.78e-49 168
MsaG010337 AT3G01140.1 64.407 118 41 1 1 117 44 161 9.75e-49 171
MsaG010337 AT1G16490.1 63.158 114 41 1 3 115 5 118 1.10e-48 168
MsaG010337 AT3G02940.2 61.864 118 44 1 1 117 1 118 1.19e-48 169
MsaG010337 AT1G74080.1 64.407 118 41 1 1 117 1 118 1.26e-48 169
MsaG010337 AT3G02940.1 61.864 118 44 1 1 117 1 118 2.76e-48 168
MsaG010337 AT3G02940.3 61.864 118 44 1 1 117 1 118 2.76e-48 168
MsaG010337 AT3G61250.1 63.248 117 42 1 1 116 1 117 3.48e-48 167
MsaG010337 AT1G34670.1 61.864 118 44 1 1 117 1 118 9.00e-48 168
MsaG010337 AT5G60890.1 62.931 116 42 1 1 115 1 116 1.03e-47 166
MsaG010337 AT5G10280.1 61.017 118 45 1 1 117 1 118 1.07e-47 167
MsaG010337 AT1G18570.1 63.025 119 42 1 1 117 1 119 1.35e-47 167
MsaG010337 AT1G79180.1 61.538 117 44 1 3 118 5 121 2.19e-47 165
MsaG010337 AT1G74430.1 63.393 112 41 0 7 118 8 119 3.65e-47 164
MsaG010337 AT5G61420.2 61.017 118 45 1 1 117 1 118 4.87e-47 166
MsaG010337 AT5G65230.1 61.864 118 44 1 1 117 1 118 6.50e-47 164
MsaG010337 AT5G07690.1 58.209 134 54 2 1 132 1 134 7.14e-47 165
MsaG010337 AT1G22640.1 58.120 117 48 1 1 116 1 117 2.82e-46 161
MsaG010337 AT4G38620.1 58.974 117 47 1 1 116 1 117 2.86e-46 162
MsaG010337 AT4G17785.2 57.983 119 48 1 1 117 1 119 3.21e-46 164
MsaG010337 AT4G17785.1 57.983 119 48 1 1 117 1 119 3.28e-46 164
MsaG010337 AT4G22680.1 61.017 118 45 1 1 117 1 118 3.55e-46 161
MsaG010337 AT5G16600.1 61.864 118 44 1 1 117 1 118 2.31e-45 161
MsaG010337 AT4G12350.1 41.892 222 105 6 1 209 1 211 3.80e-45 159
MsaG010337 AT2G16720.1 57.265 117 49 1 1 116 1 117 4.02e-45 158
MsaG010337 AT5G26660.1 57.600 125 44 1 6 130 7 122 4.18e-45 161
MsaG010337 AT1G56160.1 60.526 114 44 1 3 115 5 118 5.04e-45 159
MsaG010337 AT4G34990.1 57.627 118 49 1 1 117 1 118 5.73e-45 158
MsaG010337 AT4G09460.1 58.120 117 48 1 1 116 1 117 5.77e-45 157
MsaG010337 AT5G54230.1 62.617 107 40 0 11 117 12 118 5.78e-45 159
MsaG010337 AT1G66230.1 60.169 118 46 1 1 117 1 118 7.02e-45 158
MsaG010337 AT1G35515.1 57.265 117 49 1 1 116 1 117 9.07e-45 155
MsaG010337 AT1G57560.2 58.036 112 47 0 6 117 7 118 1.25e-44 157
MsaG010337 AT5G14750.1 44.503 191 97 4 8 193 13 199 1.25e-44 155
MsaG010337 AT4G01680.3 61.818 110 42 0 6 115 7 116 1.39e-44 156
MsaG010337 AT1G57560.1 58.036 112 47 0 6 117 7 118 1.43e-44 158
MsaG010337 AT3G12820.1 58.621 116 47 1 3 117 5 120 1.79e-44 155
MsaG010337 AT5G56110.1 58.621 116 47 1 1 115 1 116 2.44e-44 158
MsaG010337 AT1G18710.1 60.550 109 43 0 7 115 8 116 3.02e-44 156
MsaG010337 AT3G12720.1 55.856 111 49 0 6 116 17 127 4.54e-44 157
MsaG010337 AT4G01680.1 61.818 110 42 0 6 115 7 116 5.01e-44 157
MsaG010337 AT5G62320.1 46.429 168 73 4 3 162 4 162 8.62e-44 154
MsaG010337 AT3G13540.1 55.172 116 51 1 4 118 15 130 1.13e-43 154
MsaG010337 AT5G35550.1 55.385 130 58 0 11 140 14 143 3.54e-43 153
MsaG010337 AT3G62610.1 58.621 116 47 1 1 115 1 116 3.94e-43 155
MsaG010337 AT3G13890.2 57.658 111 47 0 6 116 7 117 4.47e-43 155
MsaG010337 AT1G09540.1 49.286 140 60 1 6 145 7 135 9.73e-43 155
MsaG010337 AT3G28470.1 60.000 110 43 1 1 109 1 110 1.95e-42 153
MsaG010337 AT5G14340.1 57.759 116 48 1 1 115 13 128 2.45e-42 151
MsaG010337 AT5G49330.1 58.621 116 47 1 1 115 1 116 3.34e-42 153
MsaG010337 AT3G47600.1 57.627 118 49 1 1 117 1 118 3.37e-42 152
MsaG010337 AT3G28910.1 58.475 118 48 1 1 117 1 118 5.78e-42 152
MsaG010337 AT5G62470.2 45.614 171 91 2 1 169 1 171 7.48e-42 152
MsaG010337 AT2G47460.1 56.034 116 50 1 1 115 1 116 1.35e-41 152
MsaG010337 AT5G40330.1 60.577 104 41 0 12 115 13 116 2.29e-41 147
MsaG010337 AT1G63910.1 56.250 112 49 0 6 117 7 118 2.48e-41 151
MsaG010337 AT5G57620.1 54.098 122 54 2 1 120 1 122 2.50e-41 150
MsaG010337 AT3G27920.1 52.941 119 56 0 3 121 6 124 4.07e-41 146
MsaG010337 AT1G79180.2 48.000 150 44 2 3 118 5 154 7.98e-41 149
MsaG010337 AT1G08810.1 55.556 126 55 1 1 125 1 126 8.32e-41 147
MsaG010337 AT1G74650.1 57.265 117 49 1 1 116 1 117 1.05e-40 148
MsaG010337 AT4G01680.2 55.738 122 42 1 6 115 7 128 1.17e-40 149
MsaG010337 AT3G49690.1 55.932 118 50 2 1 116 1 118 1.56e-40 147
MsaG010337 AT5G12870.1 58.879 107 44 0 11 117 18 124 3.34e-40 145
MsaG010337 AT5G62470.1 45.614 171 90 3 1 169 1 170 3.37e-40 147
MsaG010337 AT3G13890.1 53.333 120 47 1 6 116 7 126 4.37e-40 148
MsaG010337 AT5G23000.1 53.390 118 53 2 1 116 1 118 4.87e-40 147
MsaG010337 AT4G37780.1 51.181 127 56 3 1 125 1 123 9.65e-40 145
MsaG010337 AT3G08500.1 60.952 105 41 0 11 115 30 134 2.16e-39 145
MsaG010337 AT5G06100.1 53.982 113 52 0 2 114 23 135 3.33e-39 147
MsaG010337 AT5G65790.1 54.237 118 52 2 1 116 1 118 5.00e-39 145
MsaG010337 AT2G32460.2 60.000 105 42 0 10 114 5 109 6.44e-39 147
MsaG010337 AT2G32460.1 58.333 108 45 0 7 114 14 121 6.75e-39 147
MsaG010337 AT5G06100.5 53.982 113 52 0 2 114 23 135 1.08e-38 147
MsaG010337 AT5G06100.2 53.982 113 52 0 2 114 23 135 1.08e-38 147
MsaG010337 AT5G06100.3 53.982 113 52 0 2 114 23 135 1.08e-38 147
MsaG010337 AT5G06100.4 53.982 113 52 0 2 114 23 135 1.08e-38 147
MsaG010337 AT2G36890.1 54.237 118 52 2 1 116 1 118 2.40e-38 141
MsaG010337 AT2G36890.2 54.237 118 52 2 1 116 42 159 3.90e-38 142
MsaG010337 AT3G11440.2 53.097 113 49 1 6 114 32 144 5.33e-38 144
MsaG010337 AT3G30210.1 44.086 186 75 3 10 182 26 195 6.64e-38 139
MsaG010337 AT5G40350.1 57.009 107 46 0 11 117 17 123 1.10e-37 137
MsaG010337 AT3G27810.1 57.944 107 44 1 11 117 20 125 1.37e-37 137
MsaG010337 AT3G11440.3 38.785 214 93 6 6 192 32 234 1.64e-37 144
MsaG010337 AT3G11440.4 38.785 214 93 6 6 192 32 234 1.64e-37 144
MsaG010337 AT3G11440.1 38.785 214 93 6 6 192 32 234 1.64e-37 144
MsaG010337 AT5G52260.1 57.944 107 45 0 12 118 13 119 2.47e-37 137
MsaG010337 AT3G24310.1 59.048 105 43 0 10 114 17 121 2.78e-37 137
MsaG010337 AT4G26930.1 57.282 103 44 0 11 113 19 121 2.92e-37 140
MsaG010337 AT4G13480.1 60.194 103 41 0 12 114 7 109 6.12e-37 136
MsaG010337 AT3G48920.1 57.843 102 43 0 12 113 19 120 7.14e-37 136
MsaG010337 AT5G52600.1 56.731 104 45 0 11 114 12 115 1.33e-36 134
MsaG010337 AT1G48000.1 56.311 103 45 0 11 113 32 134 1.55e-36 135
MsaG010337 AT5G55020.1 55.046 109 49 0 11 119 26 134 2.53e-36 140
MsaG010337 AT4G25560.1 55.140 107 48 0 12 118 11 117 2.85e-36 135
MsaG010337 AT3G01530.1 55.340 103 46 0 11 113 25 127 4.15e-36 132
MsaG010337 AT1G68320.1 55.769 104 46 0 11 114 19 122 1.77e-35 133
MsaG010337 AT1G66370.1 55.238 105 47 0 10 114 7 111 3.11e-35 131
MsaG010337 AT1G66380.1 53.390 118 55 0 8 125 5 122 3.80e-35 127
MsaG010337 AT2G47190.1 39.583 192 92 5 11 198 20 191 3.99e-35 132
MsaG010337 AT1G25340.1 48.507 134 58 2 12 145 19 141 9.35e-35 131
MsaG010337 AT2G26960.1 56.436 101 44 0 13 113 22 122 1.81e-34 134
MsaG010337 AT5G35550.2 56.863 102 44 0 39 140 45 146 7.71e-34 128
MsaG010337 AT3G46130.1 53.333 105 49 0 10 114 8 112 9.54e-34 127
MsaG010337 AT5G59780.3 53.398 103 48 0 12 114 9 111 1.76e-33 126
MsaG010337 AT5G14750.3 43.678 174 84 6 23 193 3 165 9.16e-33 122
MsaG010337 AT3G53200.1 52.885 104 49 0 11 114 9 112 1.00e-32 124
MsaG010337 AT1G56650.1 52.991 117 55 0 10 126 7 123 2.74e-32 123
MsaG010337 AT1G66390.1 56.190 105 46 0 10 114 7 111 7.60e-32 122
MsaG010337 AT3G06490.1 49.587 121 60 1 11 131 19 138 1.14e-31 124
MsaG010337 AT5G26660.2 60.920 87 25 1 44 130 14 91 8.48e-31 121
MsaG010337 AT5G49620.1 48.760 121 61 1 11 131 26 145 1.25e-30 120
MsaG010337 AT3G12820.2 69.014 71 22 0 47 117 2 72 3.03e-30 116
MsaG010337 AT1G25340.2 46.269 134 56 3 12 145 19 136 4.45e-30 118
MsaG010337 AT1G25340.3 46.269 134 56 3 12 145 19 136 8.68e-30 118
MsaG010337 AT3G60460.1 50.000 104 51 1 11 113 11 114 1.79e-28 114
MsaG010337 AT3G27810.2 60.526 76 29 1 42 117 2 76 3.17e-28 110
MsaG010337 AT3G47600.2 55.789 95 38 1 23 117 22 112 3.79e-28 114
MsaG010337 AT5G40350.2 60.811 74 29 0 44 117 5 78 1.09e-27 108
MsaG010337 AT3G09230.1 49.123 114 49 2 13 122 55 163 1.40e-27 114
MsaG010337 AT3G27785.1 44.068 118 65 1 5 122 181 297 1.47e-27 114
MsaG010337 AT5G11050.1 33.740 246 124 8 13 249 105 320 1.76e-27 114
MsaG010337 AT3G23250.2 37.349 166 83 4 57 202 1 165 2.67e-27 109
MsaG010337 AT5G49620.2 43.704 135 61 2 11 131 26 159 3.21e-27 111
MsaG010337 AT4G18770.1 44.860 107 58 1 11 117 215 320 4.56e-27 113
MsaG010337 AT5G40360.1 46.491 114 56 3 11 123 156 265 4.74e-27 112
MsaG010337 AT2G26950.1 48.421 95 49 0 13 107 18 112 1.79e-26 110
MsaG010337 AT3G46130.3 59.722 72 29 0 43 114 9 80 3.84e-26 106
MsaG010337 AT5G58850.1 41.270 126 64 3 11 135 103 219 4.13e-26 110
MsaG010337 AT5G59780.2 60.563 71 28 0 44 114 20 90 6.61e-26 105
MsaG010337 AT3G46130.4 60.563 71 28 0 44 114 20 90 8.27e-26 105
MsaG010337 AT1G69560.1 32.821 195 103 3 13 181 107 299 9.43e-26 107
MsaG010337 AT1G69560.2 32.821 195 103 3 13 181 123 315 1.02e-25 107
MsaG010337 AT3G53200.2 61.972 71 27 0 44 114 9 79 2.50e-25 103
MsaG010337 AT1G26780.2 44.715 123 64 3 11 132 96 215 2.76e-25 107
MsaG010337 AT1G17950.1 46.610 118 51 3 13 129 5 111 3.10e-25 104
MsaG010337 AT5G67300.1 48.544 103 50 2 13 114 6 106 4.32e-25 105
MsaG010337 AT1G26780.1 44.444 117 62 2 11 126 96 210 4.99e-25 104
MsaG010337 AT3G50060.1 47.573 103 51 2 13 114 6 106 1.38e-24 103
MsaG010337 AT5G11510.3 42.593 108 61 1 8 115 76 182 1.63e-24 107
MsaG010337 AT5G11510.3 34.000 100 64 2 13 111 29 127 3.04e-13 72.8
MsaG010337 AT5G11510.1 42.593 108 61 1 8 115 76 182 1.63e-24 107
MsaG010337 AT5G11510.1 34.000 100 64 2 13 111 29 127 3.04e-13 72.8
MsaG010337 AT5G11510.4 42.593 108 61 1 8 115 76 182 1.63e-24 107
MsaG010337 AT5G11510.4 34.000 100 64 2 13 111 29 127 3.04e-13 72.8
MsaG010337 AT5G11510.2 42.593 108 61 1 8 115 76 182 2.35e-24 107
MsaG010337 AT5G11510.2 34.000 100 64 2 13 111 29 127 3.85e-13 72.4
MsaG010337 AT5G11510.5 42.593 108 61 1 8 115 76 182 2.58e-24 106
MsaG010337 AT5G11510.5 34.000 100 64 2 13 111 29 127 3.75e-13 72.4
MsaG010337 AT3G55730.1 47.115 104 52 2 13 115 56 157 3.97e-24 104
MsaG010337 AT1G66380.3 55.952 84 37 0 42 125 6 89 5.33e-24 96.7
MsaG010337 AT3G09370.2 45.045 111 52 2 8 114 130 235 6.63e-24 104
MsaG010337 AT3G09370.2 35.000 100 63 2 13 111 83 181 1.74e-12 69.7
MsaG010337 AT3G09370.1 45.045 111 52 2 8 114 125 230 7.34e-24 104
MsaG010337 AT3G09370.1 35.000 100 63 2 13 111 78 176 2.02e-12 69.7
MsaG010337 AT4G37260.1 47.059 102 53 1 13 114 13 113 7.76e-24 102
MsaG010337 AT3G09370.3 45.045 111 52 2 8 114 138 243 9.66e-24 104
MsaG010337 AT3G09370.3 35.000 100 63 2 13 111 91 189 1.69e-12 69.7
MsaG010337 AT5G02320.1 44.954 109 57 2 8 115 122 228 1.33e-23 103
MsaG010337 AT5G02320.1 37.000 100 61 2 13 111 75 173 2.51e-14 75.5
MsaG010337 AT5G02320.2 44.954 109 57 2 8 115 122 228 1.33e-23 103
MsaG010337 AT5G02320.2 37.000 100 61 2 13 111 75 173 2.51e-14 75.5
MsaG010337 AT5G14750.4 41.429 140 77 4 57 193 1 138 1.36e-23 96.7
MsaG010337 AT5G14750.2 41.429 140 77 4 57 193 1 138 1.36e-23 96.7
MsaG010337 AT5G02320.3 44.954 109 57 2 8 115 62 168 1.99e-23 103
MsaG010337 AT5G02320.3 37.000 100 61 2 13 111 15 113 3.56e-14 75.1
MsaG010337 AT1G73410.1 49.515 103 49 2 13 114 6 106 4.41e-23 98.2
MsaG010337 AT4G33450.1 45.455 110 59 1 12 121 18 126 5.56e-23 98.2
MsaG010337 AT2G23290.1 46.602 103 52 2 13 114 13 113 8.09e-23 99.0
MsaG010337 AT2G39880.1 46.226 106 48 2 13 114 50 150 9.06e-23 99.8
MsaG010337 AT1G71030.2 57.353 68 29 0 50 117 5 72 1.09e-22 95.5
MsaG010337 AT1G71030.1 57.353 68 29 0 50 117 19 86 1.31e-22 95.5
MsaG010337 AT1G73410.2 49.515 103 49 2 13 114 6 106 1.40e-22 95.5
MsaG010337 AT1G66380.2 52.326 86 41 0 8 93 5 90 3.65e-22 91.7
MsaG010337 AT1G22640.3 61.667 60 23 0 57 116 1 60 4.62e-22 94.0
MsaG010337 AT3G29020.2 36.735 147 86 4 13 157 67 208 4.90e-22 96.7
MsaG010337 AT5G17800.1 44.118 102 56 1 13 114 93 193 6.64e-22 96.7
MsaG010337 AT3G29020.1 38.760 129 75 3 13 139 65 191 1.14e-21 94.0
MsaG010337 AT2G25230.1 45.133 113 54 4 13 124 26 131 1.20e-21 94.0
MsaG010337 AT4G32730.5 41.284 109 61 2 8 115 82 188 1.95e-21 98.2
MsaG010337 AT4G32730.5 34.579 107 68 2 13 118 35 140 2.06e-13 73.2
MsaG010337 AT4G32730.4 41.284 109 61 2 8 115 82 188 1.95e-21 98.2
MsaG010337 AT4G32730.4 34.579 107 68 2 13 118 35 140 2.06e-13 73.2
MsaG010337 AT4G32730.3 41.284 109 61 2 8 115 82 188 1.95e-21 98.2
MsaG010337 AT4G32730.3 34.579 107 68 2 13 118 35 140 2.06e-13 73.2
MsaG010337 AT4G32730.2 41.284 109 61 2 8 115 82 188 1.95e-21 98.2
MsaG010337 AT4G32730.2 34.579 107 68 2 13 118 35 140 2.06e-13 73.2
MsaG010337 AT4G32730.1 41.284 109 61 2 8 115 82 188 2.64e-21 97.4
MsaG010337 AT4G32730.1 34.579 107 68 2 13 118 35 140 2.58e-13 72.8
MsaG010337 AT1G18960.1 42.373 118 56 5 1 115 1 109 3.64e-21 94.0
MsaG010337 AT2G37630.1 35.461 141 77 3 13 151 4 132 1.29e-18 87.8
MsaG010337 AT5G40430.1 41.379 116 59 5 11 125 52 159 1.56e-18 85.5
MsaG010337 AT5G39700.1 42.857 105 53 2 12 113 55 155 8.04e-18 82.0
MsaG010337 AT4G00540.2 41.284 109 58 3 11 115 101 207 4.73e-17 83.2
MsaG010337 AT4G00540.1 41.284 109 58 3 11 115 99 205 8.30e-17 82.8
MsaG010337 AT1G14350.2 38.095 126 68 3 15 139 27 143 8.88e-17 82.8
MsaG010337 AT1G14350.1 38.095 126 68 3 15 139 27 143 8.88e-17 82.8
MsaG010337 AT3G18100.1 38.144 97 59 1 12 108 545 640 2.07e-15 79.3
MsaG010337 AT3G18100.3 38.144 97 59 1 12 108 497 592 3.63e-15 78.6
MsaG010337 AT3G18100.4 38.144 97 59 1 12 108 384 479 4.35e-15 78.2
MsaG010337 AT3G18100.2 38.144 97 59 1 12 108 332 427 5.40e-15 77.8
MsaG010337 AT2G02820.2 37.500 112 67 2 15 125 32 141 5.65e-15 77.4
MsaG010337 AT2G02820.1 37.500 112 67 2 15 125 32 141 5.99e-15 77.0
MsaG010337 AT2G02820.3 37.500 112 67 2 15 125 32 141 1.32e-14 75.1
MsaG010337 AT4G25560.2 58.696 46 19 0 72 117 5 50 8.89e-13 67.8
MsaG010337 AT5G59780.1 58.140 43 18 0 72 114 4 46 2.84e-12 65.5
MsaG010337 AT3G46130.2 58.140 43 18 0 72 114 4 46 4.67e-12 65.1

Find 82 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAACTCCTTCAAATTTAT+TGG 0.117024 2:-72076221 None:intergenic
TAAAACTCCTTCAAGTTTAT+TGG 0.126920 2:-72076695 None:intergenic
TTTCCATTGTAAGGTGATTA+TGG 0.138216 2:-72076930 None:intergenic
TGAAAATGACCTTCCTTTAA+TGG 0.144521 2:+72076993 MsaT010337.1:CDS
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2:+72076872 MsaT010337.1:CDS
GATATTTGATTTGCAATATT+AGG 0.201381 2:-72076259 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2:-72076179 None:intergenic
ATGAATAATGCATCCATTAA+AGG 0.221966 2:-72077006 None:intergenic
TCCATTGTAGGGTGATTATA+GGG 0.235335 2:-72076430 None:intergenic
CTGTGTACGATGTTGAATTT+TGG 0.241627 2:+72077130 MsaT010337.1:CDS
TTCCATTGTAGGGTGATTAT+AGG 0.248697 2:-72076431 None:intergenic
TATACTATACCTGCAAATTT+AGG 0.254465 2:-72072368 None:intergenic
TTATTGGCTTCTTCCAATAT+AGG 0.256671 2:-72076205 None:intergenic
ATGAATAATGCATCCATAAA+AGG 0.286876 2:-72076616 None:intergenic
TTCAAATAATCACCCTATAT+TGG 0.288064 2:+72076192 MsaT010337.1:CDS
GACAATCGACTTGCAATATT+AGG 0.293210 2:-72076730 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2:+72076063 MsaT010337.1:CDS
TATTGGCTTCTTCCAATATA+GGG 0.314144 2:-72076204 None:intergenic
GTGATTCTTTACCTCATTAT+CGG 0.317179 2:-72076092 None:intergenic
TTCTTGGTTTCTTCCATTGT+AGG 0.324003 2:-72076442 None:intergenic
TATGAATTGTCTATCATATA+TGG 0.327989 2:-72076403 None:intergenic
TTTAATGGATGCATTATTCA+TGG 0.332906 2:+72077008 MsaT010337.1:CDS
TAACAATTTATTCTGCAATA+TGG 0.335714 2:-72077155 None:intergenic
TGTGAACTGTCTATCATATA+AGG 0.339402 2:-72076901 None:intergenic
TTCCATTGTAAGGTGATTAT+GGG 0.349861 2:-72076929 None:intergenic
TAGAAAGTGTCTATCATATA+TGG 0.352614 2:-72076670 None:intergenic
CTAGGTATGGCTGCTGGAAT+TGG 0.368473 2:+72072336 MsaT010337.1:CDS
CGACAACTACCTAAATTTGC+AGG 0.368724 2:+72072359 MsaT010337.1:CDS
AGATAGTGAACTCGTAATAT+TGG 0.395570 2:-72076497 None:intergenic
TTCTATGCCAATAAACTTGA+AGG 0.399423 2:+72076688 MsaT010337.1:CDS
AGAACCCCTTGTGACAATAA+TGG 0.416910 2:+72072257 MsaT010337.1:CDS
AGGTCATTGTCATCAAGAAT+TGG 0.433113 2:-72076826 None:intergenic
GAAGAAGCCAATAAATTTGA+AGG 0.437102 2:+72076214 MsaT010337.1:CDS
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2:-72076125 None:intergenic
TCTTGGTTTCTTCCATTGTA+GGG 0.439231 2:-72076441 None:intergenic
AGACTGTGAGTGGGAATGAT+TGG 0.449963 2:+72077031 MsaT010337.1:CDS
GACAATAATGGATTGAGAAA+AGG 0.457500 2:+72072269 MsaT010337.1:CDS
ATTGCTTATGTAACTAGGTA+TGG 0.467457 2:+72072323 MsaT010337.1:CDS
AGTTGATTGCTTATGTAACT+AGG 0.476172 2:+72072318 MsaT010337.1:CDS
CTCAATCCATTATTGTCACA+AGG 0.493237 2:-72072263 None:intergenic
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2:+72072743 MsaT010337.1:CDS
CAAGAGAATCCGCTTGAAGA+TGG 0.512963 2:-72076526 None:intergenic
AATAGTGTAGCTTCTTCAGT+TGG 0.519397 2:-72077075 None:intergenic
AGTGTAGCTTCTTCAGTTGG+AGG 0.523199 2:-72077072 None:intergenic
GAAGAAACCAAGAAACTTGA+CGG 0.523731 2:+72076451 MsaT010337.1:CDS
TATTCATGTTCACACTCTGC+AGG 0.528775 2:-72077099 None:intergenic
CAAGACAAATCGCTTGAAGC+TGG 0.530400 2:-72076289 None:intergenic
TCCATTGTAAGGTGATTATG+GGG 0.534699 2:-72076928 None:intergenic
CGATTTGTCTTGCATAACAA+TGG 0.536383 2:+72076300 MsaT010337.1:CDS
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2:-72076348 None:intergenic
TGAATGCATCCATAAAATGA+AGG 0.545826 2:-72076846 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2:-72076082 None:intergenic
TGGATTCTCATATGATATTG+TGG 0.550630 2:-72076806 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2:+72072708 MsaT010337.1:CDS
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2:+72072690 MsaT010337.1:intron
ATGTAACTAGGTATGGCTGC+TGG 0.561976 2:+72072330 MsaT010337.1:CDS
CAATCCATTATTGTCACAAG+GGG 0.566200 2:-72072261 None:intergenic
TGCATTCTCTTGCATAACAA+TGG 0.567171 2:+72076771 MsaT010337.1:CDS
GTGATTGCTTCAAATTTACC+GGG 0.570836 2:+72076064 MsaT010337.1:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2:-72076760 None:intergenic
AAGAATATTAAGTCTAAGCG+TGG 0.575339 2:+72076145 MsaT010337.1:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2:+72072276 MsaT010337.1:CDS
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2:+72076095 MsaT010337.1:CDS
GTGTAGCTTCTTCAGTTGGA+GGG 0.583237 2:-72077071 None:intergenic
ACCGGGGAGAACCGATAATG+AGG 0.590459 2:+72076081 MsaT010337.1:CDS
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2:-72076062 None:intergenic
TCAATCCATTATTGTCACAA+GGG 0.597815 2:-72072262 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2:-72072249 None:intergenic
TCTTCGCAACCATCTTCAAG+CGG 0.608733 2:+72076517 MsaT010337.1:CDS
CCATTGTAGGGTGATTATAG+GGG 0.613750 2:-72076429 None:intergenic
CCCCTATAATCACCCTACAA+TGG 0.613964 2:+72076429 MsaT010337.1:CDS
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2:+72072744 MsaT010337.1:CDS
TAAGGTGGATGAACTATCTG+AGG 0.621739 2:+72072726 MsaT010337.1:CDS
AAAAGGCACTTGGACTCATG+AGG 0.629560 2:+72072286 MsaT010337.1:CDS
ATAATGCATCCATAAAAGGA+AGG 0.636763 2:-72076612 None:intergenic
ATAATGCATCCATTAAAGGA+AGG 0.636763 2:-72077002 None:intergenic
ATATTAAGTCTAAGCGTGGA+AGG 0.639098 2:+72076149 MsaT010337.1:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2:+72072711 MsaT010337.1:CDS
CCATTGTAAGGTGATTATGG+GGG 0.650735 2:-72076927 None:intergenic
TATTCATGGAGACTGTGAGT+GGG 0.669915 2:+72077022 MsaT010337.1:CDS
TTATTCATGGAGACTGTGAG+TGG 0.700722 2:+72077021 MsaT010337.1:CDS
TGATTGCTTCAAATTTACCG+GGG 0.729789 2:+72076065 MsaT010337.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 72072251 72077170 72072251 ID=MsaG010337
Chr2 mRNA 72072251 72077170 72072251 ID=MsaT010337.1;Parent=MsaG010337
Chr2 exon 72072251 72072380 72072251 ID=MsaT010337.1.exon1;Parent=MsaT010337.1
Chr2 CDS 72072251 72072380 72072251 ID=cds.MsaT010337.1;Parent=MsaT010337.1
Chr2 exon 72072696 72072825 72072696 ID=MsaT010337.1.exon2;Parent=MsaT010337.1
Chr2 CDS 72072696 72072825 72072696 ID=cds.MsaT010337.1;Parent=MsaT010337.1
Chr2 exon 72076057 72077170 72076057 ID=MsaT010337.1.exon3;Parent=MsaT010337.1
Chr2 CDS 72076057 72077170 72076057 ID=cds.MsaT010337.1;Parent=MsaT010337.1
Gene Sequence

>MsaT010337.1

ATGGTGAGAACCCCTTGTGACAATAATGGATTGAGAAAAGGCACTTGGACTCATGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGCTGCTGGAATTGGCGACAACTACCTAAATTTGCAGGGCTTGAAAGGTGTGGGAAGAGCTGTAGACTAAGGTGGATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAAGAAGAGATTATCATCAAACTTCATGAAAAACTGGGTAATAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCGTGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTATATTGGAAGAAGCCAATAAATTTGAAGGAGTTTTAGAGAACAACAATGATCCTAATATTGCAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCTTGCATAACAATGGAAACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTAGTGAGAATTTTTGGACAGAGCCATATATGATAGACAATTCATATGTCCCCTATAATCACCCTACAATGGAAGAAACCAAGAAACTTGACGGAGTTTTTGAGAACAACATCGATGCCAATATTACGAGTTCACTATCTTCGCAACCATCTTCAAGCGGATTCTCTTGCATAACAACAGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTATTCATGGAGACTGTGAGTGAAAATTTTATGACTGAGCCATATATGATAGACACTTTCTATGCCAATAAACTTGAAGGAGTTTTAGAGAACAGTGATCCTAATATTGCAAGTCGATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAACAATGGATACTGCATCTACCACAATATCATATGAGAATCCAATTCTTGATGACAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCTTATATGATAGACAGTTCACATGTCCCCCATAATCACCTTACAATGGAAAATGTTACTTCCACAACATCACATGAAAATTTTGTTCTTGATGAAAATGACCTTCCTTTAATGGATGCATTATTCATGGAGACTGTGAGTGGGAATGATTGGATAAACAGTTTTTATGTCCCTCCAACTGAAGAAGCTACACTATTTCCTGCAGAGTGTGAACATGAATACTTTAGTTCTGTGTACGATGTTGAATTTTGGAGCCATATTGCAGAATAA

Protein sequence

>MsaT010337.1

MVRTPCDNNGLRKGTWTHEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWMNYLRPNIKRGNFNQQEEEIIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKRGRRKAKDSNSNNHPILEEANKFEGVLENNNDPNIANQISSQPASSDLSCITMETAIFDDSDLSFMETYMDNFSENFWTEPYMIDNSYVPYNHPTMEETKKLDGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDALFMETVSENFMTEPYMIDTFYANKLEGVLENSDPNIASRLSSQPSSSAFSCITMDTASTTISYENPILDDNDLHFMDAFIEDLSENFWSEPYMIDSSHVPHNHLTMENVTSTTSHENFVLDENDLPLMDALFMETVSGNDWINSFYVPPTEEATLFPAECEHEYFSSVYDVEFWSHIAE*