AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG010345


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010345 MtrunA17_Chr2g0323411 97.239 326 9 0 1 326 1 326 0.0 658
MsaG010345 MtrunA17_Chr4g0048511 47.527 364 147 12 1 326 1 358 4.36e-93 281
MsaG010345 MtrunA17_Chr4g0039971 71.724 145 41 0 1 145 2 146 3.15e-76 238
MsaG010345 MtrunA17_Chr5g0410961 60.891 202 60 3 1 202 1 183 2.71e-75 235
MsaG010345 MtrunA17_Chr6g0453471 72.263 137 38 0 1 137 1 137 1.17e-72 228
MsaG010345 MtrunA17_Chr7g0217741 71.642 134 38 0 1 134 1 134 6.01e-72 225
MsaG010345 MtrunA17_Chr3g0115821 73.282 131 35 0 1 131 1 131 7.00e-72 226
MsaG010345 MtrunA17_Chr4g0042671 75.000 132 33 0 1 132 1 132 8.16e-72 228
MsaG010345 MtrunA17_Chr5g0395281 67.347 147 46 1 1 145 1 147 2.04e-68 216
MsaG010345 MtrunA17_Chr4g0037141 72.656 128 35 0 1 128 1 128 4.19e-66 209
MsaG010345 MtrunA17_Chr8g0349261 67.832 143 43 3 1 140 1 143 1.20e-64 206
MsaG010345 MtrunA17_Chr7g0274581 68.595 121 38 0 1 121 1 121 4.63e-63 199
MsaG010345 MtrunA17_Chr3g0131121 70.635 126 37 0 1 126 1 126 8.22e-63 201
MsaG010345 MtrunA17_Chr7g0261281 75.000 116 29 0 1 116 1 116 1.34e-62 200
MsaG010345 MtrunA17_Chr4g0057031 68.750 128 40 0 1 128 1 128 1.96e-62 199
MsaG010345 MtrunA17_Chr1g0167691 73.504 117 31 0 1 117 1 117 7.52e-62 197
MsaG010345 MtrunA17_Chr5g0434571 70.312 128 38 0 1 128 37 164 7.77e-62 201
MsaG010345 MtrunA17_Chr8g0385321 67.969 128 41 0 1 128 1 128 1.02e-61 199
MsaG010345 MtrunA17_Chr3g0110351 71.429 126 36 0 1 126 1 126 1.40e-61 198
MsaG010345 MtrunA17_Chr3g0103281 65.672 134 45 1 1 134 1 133 5.59e-61 197
MsaG010345 MtrunA17_Chr1g0167661 73.504 117 31 0 1 117 1 117 8.54e-61 194
MsaG010345 MtrunA17_Chr1g0203411 69.748 119 36 0 1 119 1 119 2.41e-60 195
MsaG010345 MtrunA17_Chr1g0187761 72.414 116 32 0 1 116 1 116 2.86e-60 193
MsaG010345 MtrunA17_Chr6g0452271 59.859 142 57 0 1 142 1 142 3.30e-60 196
MsaG010345 MtrunA17_Chr5g0435101 64.516 124 44 0 3 126 2 125 3.80e-59 189
MsaG010345 MtrunA17_Chr7g0275911 69.828 116 35 0 1 116 1 116 8.87e-59 189
MsaG010345 MtrunA17_Chr1g0193371 67.969 128 41 0 1 128 1 128 2.14e-58 192
MsaG010345 MtrunA17_Chr3g0121241 66.129 124 42 0 5 128 35 158 2.18e-58 190
MsaG010345 MtrunA17_Chr7g0217221 67.227 119 39 0 1 119 1 119 2.32e-58 189
MsaG010345 MtrunA17_Chr7g0228891 66.406 128 43 0 1 128 1 128 2.41e-58 189
MsaG010345 MtrunA17_Chr7g0254411 59.722 144 55 2 1 141 1 144 4.10e-58 190
MsaG010345 MtrunA17_Chr7g0270891 67.188 128 42 0 1 128 1 128 4.89e-58 191
MsaG010345 MtrunA17_Chr8g0346561 68.644 118 37 0 1 118 1 118 5.69e-58 189
MsaG010345 MtrunA17_Chr4g0058631 64.844 128 45 0 1 128 1 128 1.91e-57 189
MsaG010345 MtrunA17_Chr4g0068061 68.966 116 36 0 1 116 1 116 3.22e-57 188
MsaG010345 MtrunA17_Chr1g0193801 65.625 128 44 0 1 128 1 128 4.78e-57 189
MsaG010345 MtrunA17_Chr4g0060721 65.517 116 40 0 1 116 2 117 8.14e-57 187
MsaG010345 MtrunA17_Chr4g0070611 68.966 116 36 0 1 116 1 116 2.34e-56 185
MsaG010345 MtrunA17_Chr4g0070641 68.966 116 36 0 1 116 1 116 3.15e-56 180
MsaG010345 MtrunA17_Chr3g0092401 66.102 118 40 0 1 118 2 119 3.52e-56 184
MsaG010345 MtrunA17_Chr3g0117091 60.902 133 52 0 1 133 1 133 3.52e-56 186
MsaG010345 MtrunA17_Chr2g0323351 69.492 118 36 0 1 118 1 118 1.06e-55 181
MsaG010345 MtrunA17_Chr5g0417821 68.067 119 38 0 11 129 6 124 5.04e-55 181
MsaG010345 MtrunA17_Chr1g0211161 60.000 130 52 0 3 132 4 133 1.78e-54 177
MsaG010345 MtrunA17_Chr6g0453211 68.468 111 35 0 1 111 1 111 2.31e-54 180
MsaG010345 MtrunA17_Chr2g0311221 70.909 110 32 0 2 111 4 113 2.73e-54 180
MsaG010345 MtrunA17_Chr2g0309911 62.810 121 45 0 6 126 5 125 4.32e-54 179
MsaG010345 MtrunA17_Chr7g0271241 66.406 128 43 0 1 128 1 128 4.34e-54 181
MsaG010345 MtrunA17_Chr4g0022931 53.988 163 70 2 1 162 1 159 9.25e-54 177
MsaG010345 MtrunA17_Chr4g0044421 63.200 125 45 1 3 126 2 126 6.32e-53 172
MsaG010345 MtrunA17_Chr1g0194951 59.231 130 53 0 1 130 1 130 7.51e-53 177
MsaG010345 MtrunA17_Chr1g0151941 62.712 118 43 1 1 117 1 118 1.86e-52 173
MsaG010345 MtrunA17_Chr4g0022901 66.102 118 39 1 1 117 1 118 3.62e-52 173
MsaG010345 MtrunA17_Chr4g0022911 65.254 118 40 1 1 117 1 118 1.19e-51 172
MsaG010345 MtrunA17_Chr8g0387421 42.411 224 116 3 1 213 1 222 2.78e-51 172
MsaG010345 MtrunA17_Chr8g0342521 58.333 132 55 0 1 132 1 132 2.87e-51 173
MsaG010345 MtrunA17_Chr2g0330041 56.618 136 52 1 1 129 1 136 2.64e-50 172
MsaG010345 MtrunA17_Chr5g0397231 57.823 147 57 2 1 142 1 147 2.65e-50 170
MsaG010345 MtrunA17_Chr8g0342541 59.350 123 50 0 1 123 1 123 4.97e-50 169
MsaG010345 MtrunA17_Chr4g0028311 59.231 130 51 2 1 129 1 129 1.72e-49 167
MsaG010345 MtrunA17_Chr5g0400821 62.712 118 43 1 1 117 1 118 1.12e-48 165
MsaG010345 MtrunA17_Chr7g0264641 59.322 118 47 1 1 117 1 118 1.65e-48 163
MsaG010345 MtrunA17_Chr1g0152011 62.712 118 43 1 1 117 1 118 1.67e-48 166
MsaG010345 MtrunA17_Chr4g0032401 60.156 128 44 1 12 132 17 144 2.64e-48 165
MsaG010345 MtrunA17_Chr2g0327351 65.766 111 37 1 1 110 1 111 4.87e-48 164
MsaG010345 MtrunA17_Chr7g0269831 65.517 116 40 0 1 116 1 116 4.96e-48 164
MsaG010345 MtrunA17_Chr3g0135311 61.017 118 45 1 1 117 1 118 8.16e-48 164
MsaG010345 MtrunA17_Chr3g0088461 67.593 108 35 0 9 116 19 126 1.36e-47 163
MsaG010345 MtrunA17_Chr4g0022891 61.947 113 43 0 1 113 1 113 2.77e-47 159
MsaG010345 MtrunA17_Chr2g0328771 67.619 105 34 0 12 116 20 124 5.83e-47 161
MsaG010345 MtrunA17_Chr4g0022881 61.404 114 44 0 1 114 1 114 1.20e-46 157
MsaG010345 MtrunA17_Chr8g0342481 44.103 195 97 6 1 187 1 191 1.45e-45 159
MsaG010345 MtrunA17_Chr3g0099131 64.151 106 38 0 10 115 39 144 3.23e-45 161
MsaG010345 MtrunA17_Chr4g0072751 63.964 111 39 1 1 110 1 111 3.42e-45 157
MsaG010345 MtrunA17_Chr7g0228231 64.762 105 37 0 12 116 14 118 4.00e-45 152
MsaG010345 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 9.16e-45 154
MsaG010345 MtrunA17_Chr6g0487491 56.349 126 46 2 1 117 1 126 2.01e-44 152
MsaG010345 MtrunA17_Chr4g0055981 57.851 121 51 0 9 129 52 172 4.08e-44 151
MsaG010345 MtrunA17_Chr6g0450101 58.475 118 47 1 1 116 1 118 4.52e-44 150
MsaG010345 MtrunA17_Chr1g0203441 59.167 120 48 1 1 119 1 120 6.81e-44 151
MsaG010345 MtrunA17_Chr8g0343831 58.621 116 44 1 1 116 1 112 1.07e-43 150
MsaG010345 MtrunA17_Chr3g0080861 60.000 110 43 1 12 121 37 145 1.35e-43 156
MsaG010345 MtrunA17_Chr8g0354661 61.818 110 41 1 12 121 37 145 4.76e-43 155
MsaG010345 MtrunA17_Chr2g0322521 61.062 113 43 1 9 121 26 137 1.34e-42 151
MsaG010345 MtrunA17_Chr7g0247131 74.118 85 22 0 44 128 10 94 1.51e-42 148
MsaG010345 MtrunA17_Chr6g0470971 57.983 119 49 1 9 127 11 128 2.91e-42 147
MsaG010345 MtrunA17_Chr1g0194291 56.140 114 50 0 2 115 11 124 2.98e-42 147
MsaG010345 MtrunA17_Chr1g0186061 60.194 103 41 0 13 115 21 123 4.20e-42 146
MsaG010345 MtrunA17_Chr1g0209661 57.391 115 49 0 8 122 23 137 4.72e-42 148
MsaG010345 MtrunA17_Chr1g0194301 56.481 108 47 0 8 115 29 136 7.25e-42 146
MsaG010345 MtrunA17_Chr4g0042611 70.455 88 26 0 1 88 1 88 7.31e-42 140
MsaG010345 MtrunA17_Chr1g0168661 60.194 103 41 0 13 115 22 124 7.90e-42 145
MsaG010345 MtrunA17_Chr1g0180391 52.672 131 62 0 12 142 19 149 3.92e-41 143
MsaG010345 MtrunA17_Chr5g0395221 72.727 88 24 0 1 88 1 88 6.52e-41 138
MsaG010345 MtrunA17_Chr1g0154031 59.615 104 42 0 12 115 76 179 1.08e-40 147
MsaG010345 MtrunA17_Chr5g0434911 54.955 111 50 0 7 117 16 126 1.01e-39 140
MsaG010345 MtrunA17_Chr7g0240821 60.396 101 40 0 16 116 5 105 1.01e-39 139
MsaG010345 MtrunA17_Chr5g0434831 57.944 107 45 0 11 117 6 112 1.43e-39 138
MsaG010345 MtrunA17_Chr5g0434931 56.075 107 47 0 11 117 34 140 1.56e-39 140
MsaG010345 MtrunA17_Chr4g0068921 60.748 107 42 0 8 114 20 126 2.12e-39 137
MsaG010345 MtrunA17_Chr7g0220341 57.798 109 44 1 11 117 24 132 4.06e-39 139
MsaG010345 MtrunA17_Chr2g0293911 61.682 107 41 0 8 114 20 126 6.19e-39 140
MsaG010345 MtrunA17_Chr2g0294811 67.045 88 29 0 1 88 1 88 1.15e-38 133
MsaG010345 MtrunA17_Chr8g0360111 58.824 102 42 0 11 112 24 125 4.33e-38 136
MsaG010345 MtrunA17_Chr2g0327821 53.846 104 48 0 12 115 6 109 1.30e-37 134
MsaG010345 MtrunA17_Chr5g0434841 57.009 107 46 0 11 117 19 125 2.37e-37 135
MsaG010345 MtrunA17_Chr7g0228991 54.206 107 49 0 11 117 28 134 5.02e-37 134
MsaG010345 MtrunA17_Chr1g0192411 53.704 108 50 0 8 115 8 115 1.40e-36 135
MsaG010345 MtrunA17_Chr5g0440781 49.206 126 62 2 13 137 13 137 1.66e-36 130
MsaG010345 MtrunA17_Chr4g0030881 52.727 110 45 1 13 115 8 117 5.11e-36 130
MsaG010345 MtrunA17_Chr2g0323321 63.043 92 33 1 1 92 1 91 7.65e-36 125
MsaG010345 MtrunA17_Chr5g0440761 50.413 121 58 2 13 132 13 132 8.19e-36 130
MsaG010345 MtrunA17_Chr5g0441141 50.413 121 58 2 13 132 13 132 9.06e-36 130
MsaG010345 MtrunA17_Chr3g0099141 59.770 87 35 0 8 94 36 122 7.46e-35 124
MsaG010345 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 8.86e-35 122
MsaG010345 MtrunA17_Chr5g0441131 50.000 120 58 2 13 131 10 128 3.82e-34 123
MsaG010345 MtrunA17_Chr8g0334881 49.107 112 55 2 8 118 6 116 9.59e-34 126
MsaG010345 MtrunA17_Chr4g0013361 49.107 112 55 2 8 118 6 116 1.60e-32 122
MsaG010345 MtrunA17_Chr8g0342461 58.889 90 36 1 1 89 1 90 2.29e-32 117
MsaG010345 MtrunA17_Chr8g0342531 57.303 89 38 0 1 89 1 89 2.36e-32 118
MsaG010345 MtrunA17_Chr8g0342471 58.889 90 36 1 1 89 1 90 5.95e-32 116
MsaG010345 MtrunA17_Chr4g0008551 48.673 113 53 2 14 126 38 145 4.22e-29 114
MsaG010345 MtrunA17_Chr7g0238631 48.571 105 53 1 12 116 111 214 1.53e-28 115
MsaG010345 MtrunA17_Chr5g0401731 36.538 156 98 1 14 169 15 169 3.88e-28 111
MsaG010345 MtrunA17_Chr3g0093811 46.226 106 54 1 37 139 4 109 4.70e-28 109
MsaG010345 MtrunA17_Chr6g0454921 46.847 111 58 1 14 124 15 124 1.50e-27 107
MsaG010345 MtrunA17_Chr1g0157731 44.248 113 59 2 12 121 89 200 9.55e-27 110
MsaG010345 MtrunA17_Chr3g0133601 48.039 102 52 1 14 115 37 137 1.19e-26 105
MsaG010345 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 1.42e-26 105
MsaG010345 MtrunA17_Chr3g0139671 42.478 113 61 2 12 121 83 194 2.16e-26 109
MsaG010345 MtrunA17_Chr3g0117511 46.729 107 56 1 9 115 178 283 2.36e-26 108
MsaG010345 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 2.71e-26 103
MsaG010345 MtrunA17_Chr7g0229131 60.274 73 29 0 45 117 5 77 3.44e-26 102
MsaG010345 MtrunA17_Chr4g0058991 47.222 108 54 2 9 115 204 309 1.24e-25 106
MsaG010345 MtrunA17_Chr5g0429661 45.192 104 56 1 12 115 120 222 1.50e-25 104
MsaG010345 MtrunA17_Chr5g0425591 53.659 82 37 1 13 93 10 91 3.80e-25 97.1
MsaG010345 MtrunA17_Chr5g0434901 63.235 68 25 0 46 113 7 74 7.03e-25 97.1
MsaG010345 MtrunA17_Chr6g0460661 39.189 148 77 4 14 160 16 151 2.17e-24 97.4
MsaG010345 MtrunA17_Chr6g0480581 42.400 125 69 3 14 138 4 125 7.78e-24 97.8
MsaG010345 MtrunA17_Chr4g0042501 47.059 102 53 1 14 115 105 205 2.43e-23 99.8
MsaG010345 MtrunA17_Chr6g0453751 50.000 92 37 2 11 93 19 110 2.88e-23 93.2
MsaG010345 MtrunA17_Chr7g0228531 46.078 102 53 2 14 115 220 319 3.67e-23 99.4
MsaG010345 MtrunA17_Chr5g0417621 45.283 106 57 1 10 115 130 234 8.75e-23 98.2
MsaG010345 MtrunA17_Chr6g0460671 41.880 117 66 2 14 130 99 213 1.75e-22 96.3
MsaG010345 MtrunA17_Chr5g0437321 45.283 106 56 2 8 112 12 116 3.02e-22 94.7
MsaG010345 MtrunA17_Chr1g0177901 46.154 91 48 1 23 113 3 92 1.44e-20 88.2
MsaG010345 MtrunA17_Chr7g0228401 47.253 91 47 1 23 113 288 377 1.90e-20 91.7
MsaG010345 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 3.86e-20 90.9
MsaG010345 MtrunA17_Chr7g0228481 42.453 106 57 3 14 119 220 321 4.95e-20 90.1
MsaG010345 MtrunA17_Chr7g0238651 34.646 127 74 3 17 135 10 135 1.07e-19 88.6
MsaG010345 MtrunA17_Chr7g0254261 46.078 102 54 1 14 115 89 189 1.07e-19 88.6
MsaG010345 MtrunA17_Chr7g0233061 43.137 102 51 3 14 113 180 276 2.01e-18 84.7
MsaG010345 MtrunA17_Chr3g0125801 42.202 109 60 2 8 115 10 116 3.34e-18 83.6
MsaG010345 MtrunA17_Chr4g0042621 75.556 45 11 0 88 132 14 58 2.20e-17 81.6
MsaG010345 MtrunA17_Chr5g0416341 39.394 99 59 1 17 115 29 126 4.00e-17 81.6
MsaG010345 MtrunA17_Chr7g0247141 68.085 47 14 1 1 46 1 47 4.43e-17 74.3
MsaG010345 MtrunA17_Chr5g0395231 47.297 74 36 2 78 151 5 75 7.02e-17 79.0
MsaG010345 MtrunA17_Chr1g0193901 55.172 58 25 1 12 68 11 68 9.49e-17 75.1
MsaG010345 MtrunA17_Chr1g0193891 55.172 58 25 1 12 68 11 68 9.49e-17 75.1
MsaG010345 MtrunA17_Chr1g0193871 55.172 58 25 1 12 68 11 68 9.49e-17 75.1
MsaG010345 MtrunA17_Chr1g0193881 55.172 58 25 1 12 68 11 68 9.49e-17 75.1
MsaG010345 MtrunA17_Chr8g0362231 36.364 99 62 1 17 115 25 122 4.46e-15 75.5
MsaG010345 MtrunA17_Chr5g0434871 59.091 44 18 0 74 117 2 45 5.83e-15 68.9
MsaG010345 MtrunA17_Chr3g0145551 78.378 37 8 0 92 128 2 38 7.91e-15 68.9
MsaG010345 MtrunA17_Chr5g0434891 60.526 38 15 0 78 115 2 39 8.62e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010345 AT4G21440.1 46.791 374 126 13 1 326 1 349 3.31e-94 284
MsaG010345 AT4G05100.1 48.824 340 141 8 1 326 1 321 6.95e-88 266
MsaG010345 AT4G28110.1 62.273 220 64 3 1 213 1 208 6.35e-86 260
MsaG010345 AT5G16770.4 72.414 145 40 0 1 145 1 145 4.95e-76 236
MsaG010345 AT5G16770.3 72.414 145 40 0 1 145 1 145 4.95e-76 236
MsaG010345 AT3G02940.2 78.195 133 29 0 1 133 1 133 7.79e-76 235
MsaG010345 AT5G16770.1 72.414 145 40 0 1 145 1 145 1.53e-75 235
MsaG010345 AT5G16770.2 72.414 145 40 0 1 145 1 145 1.53e-75 235
MsaG010345 AT3G02940.1 78.195 133 29 0 1 133 1 133 1.91e-75 235
MsaG010345 AT3G02940.3 78.195 133 29 0 1 133 1 133 1.91e-75 235
MsaG010345 AT5G54230.1 45.427 328 141 11 1 313 1 305 2.01e-72 227
MsaG010345 AT1G34670.1 59.788 189 72 3 1 187 1 187 4.48e-72 228
MsaG010345 AT5G15310.4 73.643 129 34 0 1 129 1 129 1.29e-71 222
MsaG010345 AT5G15310.2 73.643 129 34 0 1 129 1 129 3.16e-71 224
MsaG010345 AT5G15310.1 73.643 129 34 0 1 129 1 129 3.30e-71 224
MsaG010345 AT3G01140.2 48.739 238 103 2 1 231 1 226 3.70e-71 224
MsaG010345 AT5G10280.1 66.216 148 50 0 1 148 1 148 4.32e-69 219
MsaG010345 AT5G65230.1 70.149 134 40 0 1 134 1 134 2.37e-68 216
MsaG010345 AT3G01140.1 48.936 235 101 3 4 231 47 269 6.20e-68 218
MsaG010345 AT3G61250.1 72.656 128 35 0 1 128 1 128 2.81e-67 213
MsaG010345 AT4G34990.1 71.094 128 37 0 1 128 1 128 1.49e-66 210
MsaG010345 AT4G17785.2 64.865 148 51 1 1 147 1 148 3.98e-66 212
MsaG010345 AT4G17785.1 64.865 148 51 1 1 147 1 148 4.36e-66 212
MsaG010345 AT1G22640.1 59.873 157 61 1 1 155 1 157 9.95e-66 207
MsaG010345 AT2G16720.1 70.635 126 37 0 1 126 1 126 3.00e-65 207
MsaG010345 AT4G38620.1 70.312 128 38 0 1 128 1 128 1.20e-64 206
MsaG010345 AT4G22680.1 72.656 128 35 0 1 128 1 128 1.37e-64 205
MsaG010345 AT1G74080.1 69.466 131 40 0 1 131 1 131 3.08e-64 206
MsaG010345 AT5G61420.2 69.531 128 39 0 1 128 1 128 4.06e-64 207
MsaG010345 AT5G07690.1 68.750 128 40 0 1 128 1 128 4.72e-64 206
MsaG010345 AT4G09460.1 69.841 126 38 0 1 126 1 126 9.64e-64 202
MsaG010345 AT1G18570.1 72.441 127 34 1 1 126 1 127 2.11e-63 205
MsaG010345 AT1G35515.1 68.254 126 40 0 1 126 1 126 6.36e-63 199
MsaG010345 AT5G07700.1 67.969 128 41 0 1 128 1 128 7.42e-63 203
MsaG010345 AT5G07700.2 67.969 128 41 0 1 128 1 128 7.42e-63 203
MsaG010345 AT5G60890.1 67.188 128 42 0 1 128 1 128 1.34e-62 201
MsaG010345 AT4G12350.1 71.094 128 37 0 1 128 1 128 1.99e-62 200
MsaG010345 AT1G66230.1 70.312 128 38 0 1 128 1 128 5.14e-62 199
MsaG010345 AT3G13540.1 58.824 153 57 2 4 155 15 162 1.41e-61 197
MsaG010345 AT5G56110.1 66.418 134 44 1 1 134 1 133 7.88e-61 197
MsaG010345 AT5G16600.1 69.531 128 39 0 1 128 1 128 8.99e-61 197
MsaG010345 AT3G23250.1 71.552 116 33 0 1 116 1 116 1.17e-60 196
MsaG010345 AT1G06180.1 73.109 119 32 0 1 119 1 119 1.52e-60 194
MsaG010345 AT2G31180.1 72.414 116 32 0 1 116 1 116 5.40e-60 192
MsaG010345 AT5G26660.1 60.274 146 56 1 1 146 1 144 1.74e-59 194
MsaG010345 AT1G57560.1 65.625 128 44 0 1 128 1 128 4.08e-59 192
MsaG010345 AT1G57560.2 65.625 128 44 0 1 128 1 128 4.70e-59 191
MsaG010345 AT1G18710.1 63.158 133 49 0 1 133 1 133 1.47e-58 189
MsaG010345 AT1G08810.1 67.213 122 40 0 1 122 1 122 3.18e-58 189
MsaG010345 AT1G16490.1 68.696 115 36 0 2 116 4 118 3.76e-58 189
MsaG010345 AT1G74430.1 64.062 128 46 0 1 128 1 128 1.01e-57 187
MsaG010345 AT5G62320.1 48.705 193 75 4 2 187 3 178 1.51e-57 186
MsaG010345 AT5G62470.2 65.254 118 41 0 1 118 1 118 1.68e-57 189
MsaG010345 AT3G47600.1 66.102 118 40 0 1 118 1 118 1.72e-57 189
MsaG010345 AT3G28470.1 54.167 168 76 1 1 168 1 167 5.37e-57 187
MsaG010345 AT1G74650.1 66.667 117 39 0 1 117 1 117 2.70e-56 186
MsaG010345 AT3G28910.1 67.241 116 38 0 1 116 1 116 3.12e-56 185
MsaG010345 AT1G56160.1 69.565 115 35 0 2 116 4 118 4.19e-56 184
MsaG010345 AT1G09540.1 65.625 128 44 0 1 128 1 128 5.35e-56 186
MsaG010345 AT1G79180.1 66.949 118 39 0 2 119 4 121 5.77e-56 184
MsaG010345 AT5G14340.1 64.062 128 46 0 1 128 13 140 6.07e-56 183
MsaG010345 AT4G01680.3 65.873 126 43 0 1 126 1 126 6.29e-56 182
MsaG010345 AT5G62470.1 65.254 118 40 1 1 118 1 117 1.09e-55 185
MsaG010345 AT4G01680.1 65.873 126 43 0 1 126 1 126 3.92e-55 183
MsaG010345 AT2G47460.1 67.241 116 38 0 1 116 1 116 1.62e-54 182
MsaG010345 AT3G62610.1 67.241 116 38 0 1 116 1 116 2.80e-54 181
MsaG010345 AT5G49330.1 66.379 116 39 0 1 116 1 116 5.12e-54 180
MsaG010345 AT3G12720.1 61.983 121 46 0 6 126 16 136 1.95e-52 175
MsaG010345 AT4G01680.2 60.145 138 43 1 1 126 1 138 9.84e-52 174
MsaG010345 AT3G13890.2 63.248 117 43 0 1 117 1 117 1.21e-51 174
MsaG010345 AT1G63910.1 59.231 130 53 0 1 130 1 130 3.26e-51 174
MsaG010345 AT3G12820.1 64.655 116 41 0 3 118 5 120 1.14e-50 168
MsaG010345 AT1G79180.2 52.980 151 38 1 2 119 4 154 9.70e-50 169
MsaG010345 AT5G57620.1 62.712 118 43 1 1 117 1 118 1.12e-49 169
MsaG010345 AT4G37780.1 60.169 118 46 1 1 117 1 118 1.13e-48 165
MsaG010345 AT3G13890.1 58.730 126 43 1 1 117 1 126 1.49e-48 167
MsaG010345 AT5G23000.1 62.712 118 43 1 1 117 1 118 1.57e-48 166
MsaG010345 AT3G49690.1 62.712 118 43 1 1 117 1 118 1.85e-48 165
MsaG010345 AT5G65790.1 62.712 118 43 1 1 117 1 118 5.90e-48 165
MsaG010345 AT5G40350.1 62.385 109 41 0 12 120 17 125 6.36e-47 158
MsaG010345 AT2G36890.1 56.693 127 54 1 1 126 1 127 6.62e-47 160
MsaG010345 AT5G35550.1 62.712 118 42 1 1 116 1 118 1.10e-46 159
MsaG010345 AT2G36890.2 56.693 127 54 1 1 126 42 168 1.22e-46 161
MsaG010345 AT5G12870.1 66.355 107 36 0 12 118 18 124 1.25e-46 159
MsaG010345 AT5G14750.1 61.538 104 40 0 13 116 17 120 5.53e-46 155
MsaG010345 AT5G40330.1 61.538 104 40 0 13 116 13 116 1.11e-45 155
MsaG010345 AT3G27810.1 60.909 110 43 0 12 121 20 129 4.07e-45 154
MsaG010345 AT5G06100.1 59.649 114 45 1 8 121 28 140 1.58e-44 158
MsaG010345 AT2G26960.1 52.482 141 65 2 9 149 17 155 1.90e-44 157
MsaG010345 AT5G52600.1 60.748 107 42 0 9 115 9 115 2.72e-44 150
MsaG010345 AT2G32460.1 56.911 123 52 1 4 126 10 131 3.42e-44 158
MsaG010345 AT5G55020.1 64.545 110 38 1 12 121 26 134 4.09e-44 158
MsaG010345 AT2G32460.2 59.483 116 46 1 11 126 5 119 5.06e-44 157
MsaG010345 AT3G11440.2 59.292 113 45 1 9 121 38 149 5.09e-44 157
MsaG010345 AT5G06100.5 59.649 114 45 1 8 121 28 140 5.97e-44 158
MsaG010345 AT5G06100.2 59.649 114 45 1 8 121 28 140 5.97e-44 158
MsaG010345 AT5G06100.3 59.649 114 45 1 8 121 28 140 5.97e-44 158
MsaG010345 AT5G06100.4 59.649 114 45 1 8 121 28 140 5.97e-44 158
MsaG010345 AT3G08500.1 63.303 109 40 0 8 116 26 134 6.32e-44 154
MsaG010345 AT3G01530.1 57.391 115 49 0 12 126 25 139 7.39e-44 150
MsaG010345 AT1G48000.1 53.600 125 56 1 12 134 32 156 1.97e-43 150
MsaG010345 AT3G11440.3 59.292 113 45 1 9 121 38 149 2.65e-43 157
MsaG010345 AT3G11440.4 59.292 113 45 1 9 121 38 149 2.65e-43 157
MsaG010345 AT3G11440.1 59.292 113 45 1 9 121 38 149 2.65e-43 157
MsaG010345 AT3G27920.1 58.095 105 44 0 13 117 15 119 5.73e-43 148
MsaG010345 AT2G47190.1 55.556 108 48 0 8 115 16 123 1.59e-42 148
MsaG010345 AT3G24310.1 59.813 107 43 0 9 115 15 121 1.78e-42 148
MsaG010345 AT3G30210.1 62.500 104 39 0 11 114 26 129 3.51e-42 147
MsaG010345 AT4G26930.1 61.818 110 41 1 12 121 19 127 3.61e-42 150
MsaG010345 AT4G13480.1 62.136 103 39 0 13 115 7 109 5.79e-42 146
MsaG010345 AT5G26660.2 62.745 102 36 1 45 146 14 113 5.61e-41 145
MsaG010345 AT1G25340.1 56.140 114 50 0 13 126 19 132 2.39e-40 143
MsaG010345 AT1G66370.1 53.913 115 49 1 1 115 1 111 2.75e-40 142
MsaG010345 AT3G46130.1 54.206 107 49 0 9 115 6 112 2.31e-39 139
MsaG010345 AT4G25560.1 59.813 107 43 0 13 119 11 117 2.81e-39 140
MsaG010345 AT5G59780.3 55.340 103 46 0 13 115 9 111 3.42e-39 138
MsaG010345 AT1G68320.1 56.757 111 48 0 12 122 19 129 4.06e-39 140
MsaG010345 AT3G06490.1 62.617 107 40 0 8 114 15 121 8.76e-39 140
MsaG010345 AT3G53200.1 60.577 104 41 0 12 115 9 112 4.29e-38 135
MsaG010345 AT5G52260.1 62.617 107 40 0 13 119 13 119 1.42e-37 135
MsaG010345 AT5G49620.1 45.638 149 79 1 4 150 18 166 2.17e-37 135
MsaG010345 AT1G56650.1 51.938 129 54 1 10 130 6 134 2.93e-37 134
MsaG010345 AT1G66380.1 59.048 105 43 0 11 115 7 111 5.23e-37 130
MsaG010345 AT1G66390.1 59.048 105 43 0 11 115 7 111 1.03e-35 130
MsaG010345 AT1G25340.2 53.509 114 48 1 13 126 19 127 1.94e-35 130
MsaG010345 AT3G60460.1 53.153 111 50 2 9 118 8 117 3.07e-35 130
MsaG010345 AT1G25340.3 53.509 114 48 1 13 126 19 127 3.23e-35 130
MsaG010345 AT3G48920.1 54.717 106 48 0 9 114 15 120 3.25e-35 129
MsaG010345 AT5G49620.2 41.718 163 79 2 4 150 18 180 1.04e-33 126
MsaG010345 AT5G35550.2 75.000 72 18 0 45 116 50 121 7.77e-33 122
MsaG010345 AT2G26950.1 48.673 113 57 1 9 121 13 124 7.82e-32 122
MsaG010345 AT3G12820.2 70.423 71 21 0 48 118 2 72 2.20e-31 117
MsaG010345 AT5G14750.3 64.935 77 24 1 40 116 13 86 3.61e-31 115
MsaG010345 AT1G22640.3 56.566 99 41 1 59 155 2 100 5.94e-31 116
MsaG010345 AT5G40350.2 61.538 78 30 0 43 120 3 80 1.90e-30 114
MsaG010345 AT3G47600.2 68.056 72 23 0 45 116 39 110 3.67e-30 117
MsaG010345 AT3G53200.2 71.831 71 20 0 45 115 9 79 2.51e-29 112
MsaG010345 AT3G27810.2 59.740 77 31 0 45 121 4 80 5.04e-28 107
MsaG010345 AT2G39880.1 53.922 102 46 1 14 115 50 150 1.39e-27 110
MsaG010345 AT3G46130.3 62.500 72 27 0 44 115 9 80 1.70e-27 107
MsaG010345 AT5G59780.2 63.380 71 26 0 45 115 20 90 2.43e-27 107
MsaG010345 AT5G02320.1 46.667 105 55 1 12 116 125 228 2.61e-27 112
MsaG010345 AT5G02320.2 46.667 105 55 1 12 116 125 228 2.61e-27 112
MsaG010345 AT4G18770.1 48.148 108 55 1 9 116 212 318 2.79e-27 111
MsaG010345 AT1G18960.1 43.089 123 64 3 6 128 5 121 3.04e-27 108
MsaG010345 AT5G02320.3 46.667 105 55 1 12 116 65 168 3.14e-27 111
MsaG010345 AT4G37260.1 49.020 102 51 1 14 115 13 113 4.07e-27 108
MsaG010345 AT3G46130.4 63.380 71 26 0 45 115 20 90 4.55e-27 106
MsaG010345 AT3G09230.1 47.222 108 48 2 14 117 55 157 7.53e-27 109
MsaG010345 AT3G55730.1 50.943 106 43 2 14 115 56 156 8.61e-27 109
MsaG010345 AT2G23290.1 48.039 102 52 1 14 115 13 113 1.25e-26 107
MsaG010345 AT5G40360.1 42.982 114 64 1 1 114 145 257 2.07e-26 107
MsaG010345 AT3G50060.1 47.059 102 53 1 14 115 6 106 2.30e-26 106
MsaG010345 AT3G27785.1 45.946 111 57 2 9 118 184 292 3.32e-26 108
MsaG010345 AT1G71030.1 49.474 95 45 2 38 132 7 98 4.71e-26 102
MsaG010345 AT3G23250.2 74.138 58 15 0 59 116 2 59 5.83e-26 103
MsaG010345 AT1G71030.2 52.439 82 37 1 51 132 5 84 9.27e-26 101
MsaG010345 AT3G09370.2 43.548 124 57 3 12 127 133 251 1.17e-25 107
MsaG010345 AT3G09370.1 43.548 124 57 3 12 127 128 246 1.17e-25 107
MsaG010345 AT3G09370.3 43.548 124 57 3 12 127 141 259 1.85e-25 107
MsaG010345 AT1G66380.3 63.889 72 26 0 44 115 7 78 3.06e-25 98.2
MsaG010345 AT5G67300.1 47.059 102 53 1 14 115 6 106 3.08e-25 103
MsaG010345 AT5G58850.1 47.115 104 54 1 12 115 103 205 4.76e-25 105
MsaG010345 AT4G32730.5 42.857 105 59 1 12 116 85 188 5.02e-25 106
MsaG010345 AT4G32730.4 42.857 105 59 1 12 116 85 188 5.02e-25 106
MsaG010345 AT4G32730.3 42.857 105 59 1 12 116 85 188 5.02e-25 106
MsaG010345 AT4G32730.2 42.857 105 59 1 12 116 85 188 5.02e-25 106
MsaG010345 AT4G32730.1 42.857 105 59 1 12 116 85 188 6.10e-25 105
MsaG010345 AT1G69560.1 44.444 108 59 1 9 116 102 208 1.01e-24 102
MsaG010345 AT1G69560.2 44.444 108 59 1 9 116 118 224 1.24e-24 102
MsaG010345 AT5G11510.3 44.037 109 52 2 12 116 79 182 1.93e-24 104
MsaG010345 AT5G11510.3 34.000 100 64 2 14 112 29 127 4.61e-12 67.4
MsaG010345 AT5G11510.1 44.037 109 52 2 12 116 79 182 1.93e-24 104
MsaG010345 AT5G11510.1 34.000 100 64 2 14 112 29 127 4.61e-12 67.4
MsaG010345 AT5G11510.4 44.037 109 52 2 12 116 79 182 1.93e-24 104
MsaG010345 AT5G11510.4 34.000 100 64 2 14 112 29 127 4.61e-12 67.4
MsaG010345 AT5G11510.2 44.037 109 52 2 12 116 79 182 2.17e-24 104
MsaG010345 AT5G11510.2 34.000 100 64 2 14 112 29 127 3.73e-12 67.8
MsaG010345 AT5G11510.5 44.037 109 52 2 12 116 79 182 2.33e-24 104
MsaG010345 AT5G11510.5 34.000 100 64 2 14 112 29 127 3.75e-12 67.8
MsaG010345 AT1G26780.1 48.485 99 50 1 12 110 96 193 4.71e-24 99.8
MsaG010345 AT1G26780.2 46.154 104 55 1 12 115 96 198 8.92e-24 100
MsaG010345 AT5G11050.1 45.098 102 55 1 14 115 105 205 1.28e-23 100
MsaG010345 AT2G25230.1 45.378 119 60 4 9 124 21 137 2.86e-23 96.7
MsaG010345 AT3G29020.2 37.037 135 77 3 14 141 67 200 6.25e-23 97.1
MsaG010345 AT3G29020.1 37.405 131 74 3 14 137 65 194 8.10e-23 95.5
MsaG010345 AT5G14750.4 63.793 58 21 0 59 116 2 59 3.02e-22 91.3
MsaG010345 AT5G14750.2 63.793 58 21 0 59 116 2 59 3.02e-22 91.3
MsaG010345 AT4G28110.2 46.617 133 52 3 88 213 4 124 5.56e-22 92.0
MsaG010345 AT1G17950.1 44.118 102 56 1 14 115 5 105 6.15e-22 93.2
MsaG010345 AT1G66380.2 52.439 82 39 0 11 92 7 88 1.43e-21 88.6
MsaG010345 AT5G17800.1 44.340 106 58 1 14 119 93 197 1.71e-21 93.6
MsaG010345 AT4G33450.1 39.823 113 62 2 3 115 13 119 5.63e-21 90.5
MsaG010345 AT5G40430.1 39.286 112 66 2 9 120 49 158 4.68e-20 88.2
MsaG010345 AT1G73410.1 45.631 103 53 2 14 115 6 106 2.15e-19 86.3
MsaG010345 AT1G73410.2 45.631 103 53 2 14 115 6 106 3.62e-19 84.7
MsaG010345 AT5G61420.1 72.917 48 13 0 81 128 2 49 1.14e-18 85.1
MsaG010345 AT4G00540.2 41.667 108 59 2 12 116 101 207 2.54e-18 85.5
MsaG010345 AT5G39700.1 38.739 111 66 2 9 119 51 159 2.61e-18 82.0
MsaG010345 AT2G37630.1 41.000 100 57 1 17 114 7 106 3.52e-18 84.7
MsaG010345 AT4G00540.1 41.667 108 59 2 12 116 99 205 4.41e-18 85.1
MsaG010345 AT1G14350.2 32.474 194 104 6 17 193 28 211 1.48e-17 83.6
MsaG010345 AT1G14350.1 32.474 194 104 6 17 193 28 211 1.48e-17 83.6
MsaG010345 AT5G15310.3 73.810 42 11 0 88 129 9 50 2.08e-16 77.8
MsaG010345 AT4G25560.2 67.347 49 16 0 71 119 3 51 3.06e-16 77.0
MsaG010345 AT1G22640.2 48.571 70 34 1 88 155 16 85 8.76e-15 72.0
MsaG010345 AT2G02820.2 37.374 99 61 1 17 115 33 130 1.40e-14 74.7
MsaG010345 AT2G02820.1 37.374 99 61 1 17 115 33 130 1.47e-14 74.7
MsaG010345 AT2G02820.3 37.374 99 61 1 17 115 33 130 2.44e-14 73.2
MsaG010345 AT5G59780.1 62.791 43 16 0 73 115 4 46 1.44e-13 68.2
MsaG010345 AT3G46130.2 62.791 43 16 0 73 115 4 46 2.61e-13 68.2
MsaG010345 AT1G74650.3 65.000 40 14 0 78 117 2 41 1.56e-12 67.0
MsaG010345 AT1G74430.2 50.980 51 25 0 78 128 9 59 3.57e-12 65.1
MsaG010345 AT3G28910.2 64.103 39 14 0 78 116 2 40 5.89e-12 65.1
MsaG010345 AT5G14340.2 56.818 44 19 0 88 131 10 53 4.15e-11 61.6

Find 65 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAATAGCAACATAAATT+TGG 0.073451 2:-72247077 MsaT010345.1:CDS
AATACAAATCCTTGTTATTT+TGG 0.086118 2:-72246896 MsaT010345.1:CDS
CCATCATTTCTGAACTTATT+AGG 0.176951 2:-72247157 MsaT010345.1:CDS
ATTCTCAGATCAGCTTTATT+AGG 0.234361 2:-72247199 MsaT010345.1:CDS
TATTTCATTGTCTGTTCTTC+CGG 0.234826 2:+72247330 None:intergenic
GCGGCTAGCTTTAACAATTC+AGG 0.240329 2:+72247112 None:intergenic
AACAGGAATAATGGCTTATT+AGG 0.278282 2:-72246947 MsaT010345.1:CDS
ATACTCATGGACCTGGAAAT+TGG 0.289788 2:-72248020 MsaT010345.1:CDS
AGCTGATCTGAGAATATTAA+TGG 0.303694 2:+72247207 None:intergenic
GGGAGGTTGCGCCAATTTCC+AGG 0.330792 2:+72248009 None:intergenic
ATTTCATTGTCTGTTCTTCC+GGG 0.338932 2:+72247331 None:intergenic
TTAAATAGCAACATAAATTT+GGG 0.340640 2:-72247076 MsaT010345.1:CDS
AACCTTCCTCTCTTGATATC+AGG 0.347637 2:+72247826 None:intergenic
TTCAGAAATGATGGGTTCAT+TGG 0.357638 2:+72247166 None:intergenic
CCTAATAAGTTCAGAAATGA+TGG 0.368616 2:+72247157 None:intergenic
CAAAGCCACAACAGGAATAA+TGG 0.373746 2:-72246956 MsaT010345.1:CDS
GGCGTTGGTGTCGTCGATAA+AGG 0.390569 2:+72246773 None:intergenic
ACTACTGGAACACGCACATT+AGG 0.393806 2:-72247303 MsaT010345.1:CDS
AGACGTGGAGTATGAGTAAC+AGG 0.402224 2:+72247253 None:intergenic
TTTCATTGCCTAAATAATGA+TGG 0.404066 2:-72246839 MsaT010345.1:CDS
CGGCTAGCTTTAACAATTCA+GGG 0.404962 2:+72247113 None:intergenic
ATTCAGCTCCACAGTGTCTT+GGG 0.419817 2:-72247778 MsaT010345.1:CDS
AGATCTTCTTCTTGTGTCCA+TGG 0.432167 2:+72248063 None:intergenic
CGAAATTCCAGAGGGTACTT+TGG 0.436494 2:-72246681 MsaT010345.1:CDS
TCAGAAATGATGGGTTCATT+GGG 0.441253 2:+72247167 None:intergenic
TATTCAGCTCCACAGTGTCT+TGG 0.453274 2:-72247779 MsaT010345.1:CDS
ACAATGAAATAAAGAACTAC+TGG 0.460692 2:-72247318 MsaT010345.1:CDS
TACCAACTCAAAGCCACAAC+AGG 0.461419 2:-72246964 MsaT010345.1:CDS
GTATTTGAAATTGATCTTGA+GGG 0.468730 2:+72246984 None:intergenic
AATACTCTCTTCTTCTTCAA+AGG 0.469466 2:+72247801 None:intergenic
CTCAGATCAGCTTTATTAGG+AGG 0.473968 2:-72247196 MsaT010345.1:CDS
ATCAACTACATTAATACTCA+TGG 0.479738 2:-72248033 MsaT010345.1:CDS
GCAAGAGTTGTCGCCTTCGA+TGG 0.493189 2:-72247864 MsaT010345.1:CDS
ATAAGCCATTATTCCTGTTG+TGG 0.493457 2:+72246951 None:intergenic
TATGTTGCTATTTAATAATG+TGG 0.498309 2:+72247084 None:intergenic
AAATGATGGGTTCATTGGGT+TGG 0.498615 2:+72247171 None:intergenic
AAACAGTACGGGATATGAAT+CGG 0.507142 2:-72246810 MsaT010345.1:CDS
GGTATTTGAAATTGATCTTG+AGG 0.514597 2:+72246983 None:intergenic
ACACCTTGTTGTGATAAAAG+TGG 0.533939 2:-72248099 MsaT010345.1:CDS
TTCCTGTTGTGGCTTTGAGT+TGG 0.540848 2:+72246962 None:intergenic
TACATTAATACTCATGGACC+TGG 0.541813 2:-72248027 MsaT010345.1:CDS
ACATATGTTGGTGATGGCGT+TGG 0.552968 2:+72246758 None:intergenic
TTAATGTCCAAAGTACCCTC+TGG 0.555413 2:+72246674 None:intergenic
TAGCTGCACAGAGGAAGAGA+GGG 0.566398 2:-72246732 MsaT010345.1:CDS
CTATTCACATATGTTGGTGA+TGG 0.573047 2:+72246752 None:intergenic
ATTTAATAATGTGGCCGTCG+CGG 0.583877 2:+72247093 None:intergenic
ATATTATTACAGGTCTTCAA+AGG 0.587096 2:-72247891 MsaT010345.1:intron
TCATTTCTGAACTTATTAGG+TGG 0.587317 2:-72247154 MsaT010345.1:CDS
ATTACAGGTCTTCAAAGGTG+TGG 0.593786 2:-72247886 MsaT010345.1:intron
GCTATAGCTGCTAGATTACC+CGG 0.599027 2:-72247349 MsaT010345.1:CDS
ATAGCTGCACAGAGGAAGAG+AGG 0.602380 2:-72246733 MsaT010345.1:CDS
TCAAATAGTTTGTCCATCGA+AGG 0.602928 2:+72247851 None:intergenic
CTAATAAGTTCAGAAATGAT+GGG 0.614515 2:+72247158 None:intergenic
ATTGTTAAAGCTAGCCGCGA+CGG 0.614544 2:-72247107 MsaT010345.1:CDS
GTGCAGCTATTCACATATGT+TGG 0.620924 2:+72246746 None:intergenic
GACCTGATATCAAGAGAGGA+AGG 0.621894 2:-72247828 MsaT010345.1:CDS
TTGAGACCTGATATCAAGAG+AGG 0.625731 2:-72247832 MsaT010345.1:CDS
AAATCCTCTCCAAAATAACA+AGG 0.633825 2:+72246887 None:intergenic
TTCAAGTTCGAAATTCCAGA+GGG 0.644657 2:-72246689 MsaT010345.1:CDS
AGGAAAAGACTACTTCGAAG+TGG 0.647134 2:-72247283 MsaT010345.1:CDS
ATTCAAGTTCGAAATTCCAG+AGG 0.654379 2:-72246690 MsaT010345.1:CDS
TGATCTGAGAATATTAATGG+AGG 0.677931 2:+72247210 None:intergenic
TCAAATAGATGATCGAGACG+TGG 0.708158 2:+72247238 None:intergenic
ACTTGTTTCCCAAGACACTG+TGG 0.717447 2:+72247770 None:intergenic
ATATGTGAATAGCTGCACAG+AGG 0.785270 2:-72246741 MsaT010345.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 72246661 72248130 72246661 ID=MsaG010345
Chr2 mRNA 72246661 72248130 72246661 ID=MsaT010345.1;Parent=MsaG010345
Chr2 exon 72246661 72247378 72246661 ID=MsaT010345.1.exon3;Parent=MsaT010345.1
Chr2 CDS 72246661 72247378 72246661 ID=cds.MsaT010345.1;Parent=MsaT010345.1
Chr2 exon 72247772 72247901 72247772 ID=MsaT010345.1.exon2;Parent=MsaT010345.1
Chr2 CDS 72247772 72247901 72247772 ID=cds.MsaT010345.1;Parent=MsaT010345.1
Chr2 exon 72247998 72248130 72247998 ID=MsaT010345.1.exon1;Parent=MsaT010345.1
Chr2 CDS 72247998 72248130 72247998 ID=cds.MsaT010345.1;Parent=MsaT010345.1
Gene Sequence

>MsaT010345.1

ATGGGAAGAACACCTTGTTGTGATAAAAGTGGACTCAAAAAAGGTCCATGGACACAAGAAGAAGATCTCATGCTTATCAACTACATTAATACTCATGGACCTGGAAATTGGCGCAACCTCCCCAAAAATGCTGGTCTTCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGACAAACTATTTGAGACCTGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGAGTATTATTCAGCTCCACAGTGTCTTGGGAAACAAGTGGTCTGCTATAGCTGCTAGATTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATCGATCCTGTTACTCATACTCCACGTCTCGATCATCTATTTGACATGTCCTCCATTAATATTCTCAGATCAGCTTTATTAGGAGGAACCAACCCAATGAACCCATCATTTCTGAACTTATTAGGTGGTGCTCAAGCTTTGATGAACCCTGAATTGTTAAAGCTAGCCGCGACGGCCACATTATTAAATAGCAACATAAATTTGGGTTCACAGAATCAACAACAGATAAATAATGCTGCTAATAGTACTCAACAACAAGTGCAAAATCAAGTTTACCCTCAAGATCAATTTCAAATACCAACTCAAAGCCACAACAGGAATAATGGCTTATTAGGAAACATGAGTTGTTCAAGTTCAGCTGAAAATACAAATCCTTGTTATTTTGGAGAGGATTTGATTTCTAAACAATATTCAGAATTGTTTCATTGCCTAAATAATGATGGAAACAAAAACAGTACGGGATATGAATCGGTTATATCGACTACTCCTTTATCGACGACACCAACGCCATCACCAACATATGTGAATAGCTGCACAGAGGAAGAGAGGGATACATATTGCAGTGACATATTCAAGTTCGAAATTCCAGAGGGTACTTTGGACATTAATGATTTCTTGTAA

Protein sequence

>MsaT010345.1

MGRTPCCDKSGLKKGPWTQEEDLMLINYINTHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEESIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSALLGGTNPMNPSFLNLLGGAQALMNPELLKLAATATLLNSNINLGSQNQQQINNAANSTQQQVQNQVYPQDQFQIPTQSHNRNNGLLGNMSCSSSAENTNPCYFGEDLISKQYSELFHCLNNDGNKNSTGYESVISTTPLSTTPTPSPTYVNSCTEEERDTYCSDIFKFEIPEGTLDINDFL*