AlfalfaGEDB | MsaG010569

M. sativa ssp. caerulea / MsaG010569

KEGG: K04454 K09260
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009657 GO:0009658 GO:0009791 GO:0009888 GO:0009889 GO:0009909 GO:0009911 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0010817 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048316 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051049 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0080090 GO:0140110 GO:1903506 GO:2000012 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010569	XP_003597147.1	90.741	162	14	1	1	161	1	162	1.93e-101	301

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010569	sp\|Q9FKK2\|AGL62_ARATH	57.407	162	65	2	4	161	2	163	1.12e-54	177

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010569	tr\|G7IU48\|G7IU48_MEDTR	90.741	162	14	1	1	161	1	162	9.23e-102	301

TFs/TRs:

Gene ID	Type	Classification
MsaG010569	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000223	MsaG010569	0.879858	1.863966e-69	3.341787e-66
MsaG000436	MsaG010569	0.845642	6.713653e-59	3.142293e-56
MsaG000532	MsaG010569	0.807725	7.467511e-50	1.207261e-47
MsaG000609	MsaG010569	0.811390	1.229649e-50	2.172450e-48
MsaG001134	MsaG010569	0.802449	9.376762e-49	1.340186e-46
MsaG001810	MsaG010569	0.855196	1.435222e-61	9.337572e-59
MsaG003648	MsaG010569	0.815840	1.303924e-51	2.574793e-49
MsaG004839	MsaG010569	0.812869	5.872065e-51	1.076020e-48
MsaG005897	MsaG010569	0.831330	3.200348e-55	9.622448e-53
MsaG006094	MsaG010569	0.811074	1.438745e-50	2.522247e-48
MsaG006699	MsaG010569	0.831534	2.852768e-55	8.628914e-53
MsaG006815	MsaG010569	0.813811	3.654964e-51	6.857547e-49
MsaG007455	MsaG010569	0.817765	4.846385e-52	1.005437e-49
MsaG009707	MsaG010569	0.832400	1.747426e-55	5.420212e-53
MsaG042782	MsaG010569	0.825234	9.297456e-54	2.353843e-51
MsaG044129	MsaG010569	0.869347	6.723286e-66	7.580766e-63
MsaG001982	MsaG010569	0.854623	2.100291e-61	1.338708e-58
MsaG010569	MsaG019458	0.865793	9.140983e-65	8.914270e-62
MsaG010569	MsaG023179	0.805010	2.772979e-49	4.204991e-47
MsaG010569	MsaG029155	0.801008	1.845896e-48	2.553194e-46
MsaG010569	MsaG032092	0.809772	2.739769e-50	4.653125e-48
MsaG010569	MsaG034900	0.831960	2.242300e-55	6.867498e-53
MsaG010569	MsaG037359	0.845402	7.792241e-59	3.618358e-56
MsaG010569	MsaG037912	0.805075	2.687688e-49	4.081776e-47
MsaG010569	MsaG041546	0.802146	1.081806e-48	1.535439e-46
MsaG015485	MsaG010569	0.843753	2.155503e-58	9.481790e-56
MsaG017201	MsaG010569	0.833881	7.507773e-56	2.432000e-53
MsaG018489	MsaG010569	0.809545	3.064545e-50	5.176306e-48
MsaG018798	MsaG010569	0.873213	3.599764e-67	4.786800e-64
MsaG019645	MsaG010569	0.870552	2.726124e-66	3.232666e-63
MsaG020407	MsaG010569	0.801771	1.290573e-48	1.816196e-46
MsaG020852	MsaG010569	0.826573	4.486250e-54	1.178804e-51
MsaG021775	MsaG010569	0.800652	2.180999e-48	2.992665e-46
MsaG022345	MsaG010569	0.816012	1.193819e-51	2.367694e-49
MsaG024114	MsaG010569	0.824314	1.528530e-53	3.773798e-51
MsaG026478	MsaG010569	0.804790	3.080822e-49	4.647984e-47
MsaG026934	MsaG010569	0.806674	1.244143e-49	1.961794e-47
MsaG026938	MsaG010569	0.818399	3.490232e-52	7.360192e-50
MsaG029349	MsaG010569	0.802886	7.626192e-49	1.100932e-46
MsaG032221	MsaG010569	0.844200	1.638436e-58	7.312963e-56
MsaG033059	MsaG010569	0.868701	1.086132e-65	1.192409e-62
MsaG033066	MsaG010569	0.884016	5.892135e-71	1.286730e-67
MsaG033986	MsaG010569	0.864215	2.843234e-64	2.603573e-61
MsaG034387	MsaG010569	0.816657	8.579869e-52	1.729837e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010569	MtrunA17_Chr2g0325971	90.741	162	14	1	1	161	1	162	1.78e-105	301
MsaG010569	MtrunA17_Chr1g0208561	90.062	161	15	1	1	160	1	161	1.05e-103	296
MsaG010569	MtrunA17_Chr3g0089141	89.441	161	16	1	1	160	1	161	2.62e-102	293
MsaG010569	MtrunA17_Chr1g0208581	87.037	162	20	1	1	161	1	162	5.82e-101	290
MsaG010569	MtrunA17_Chr1g0206721	80.247	162	31	1	1	161	1	162	3.24e-90	263
MsaG010569	MtrunA17_Chr1g0206701	78.395	162	34	1	1	161	1	162	2.88e-88	258
MsaG010569	MtrunA17_Chr8g0355091	78.395	162	34	1	1	161	1	162	5.34e-87	254
MsaG010569	MtrunA17_Chr2g0292791	75.301	166	40	1	1	165	1	166	6.22e-87	254
MsaG010569	MtrunA17_Chr1g0206991	76.543	162	37	1	1	161	1	162	2.62e-86	251
MsaG010569	MtrunA17_Chr1g0149391	75.926	162	38	1	1	161	1	162	4.02e-85	250
MsaG010569	MtrunA17_Chr3g0099421	72.892	166	44	1	1	165	26	191	9.60e-85	249
MsaG010569	MtrunA17_Chr2g0300441	70.659	167	48	1	1	166	1	167	6.39e-79	234
MsaG010569	MtrunA17_Chr1g0187361	70.625	160	46	1	1	159	1	160	1.29e-76	228
MsaG010569	MtrunA17_Chr2g0300421	83.582	134	21	1	1	133	1	134	1.07e-74	221
MsaG010569	MtrunA17_Chr5g0419601	69.136	162	49	1	1	161	1	162	1.25e-74	223
MsaG010569	MtrunA17_Chr5g0422421	69.136	162	49	1	1	161	1	162	2.62e-74	222
MsaG010569	MtrunA17_Chr1g0188671	66.875	160	52	1	1	159	39	198	4.12e-73	221
MsaG010569	MtrunA17_Chr1g0206691	71.724	145	40	1	18	161	1	145	7.72e-71	213
MsaG010569	MtrunA17_Chr2g0317451	64.198	162	57	1	1	161	1	162	1.46e-70	213
MsaG010569	MtrunA17_Chr2g0317481	64.198	162	57	1	1	161	1	162	1.59e-70	213
MsaG010569	MtrunA17_Chr3g0099411	81.250	128	23	1	1	127	1	128	3.17e-69	209
MsaG010569	MtrunA17_Chr5g0422941	63.580	162	58	1	1	161	1	162	1.61e-67	205
MsaG010569	MtrunA17_Chr7g0238991	69.784	139	41	1	24	161	36	174	2.67e-63	195
MsaG010569	MtrunA17_Chr3g0089151	72.222	126	34	1	1	125	1	126	7.08e-61	184
MsaG010569	MtrunA17_Chr3g0119901	55.263	152	67	1	9	159	9	160	5.60e-59	182
MsaG010569	MtrunA17_Chr3g0085241	53.165	158	73	1	3	159	35	192	1.18e-57	181
MsaG010569	MtrunA17_Chr8g0379021	44.304	158	79	2	5	159	8	159	4.07e-40	133
MsaG010569	MtrunA17_Chr3g0111931	61.165	103	39	1	21	122	2	104	4.15e-38	126
MsaG010569	MtrunA17_Chr2g0333981	40.645	155	89	1	5	159	8	159	5.86e-36	123
MsaG010569	MtrunA17_Chr4g0018951	44.526	137	65	3	22	158	25	150	2.73e-33	115
MsaG010569	MtrunA17_Chr1g0187351	77.273	66	15	0	18	83	1	66	3.43e-30	105
MsaG010569	MtrunA17_Chr3g0111841	79.661	59	12	0	15	73	2	60	2.63e-28	100
MsaG010569	MtrunA17_Chr4g0071601	39.394	165	87	2	5	159	8	169	4.12e-27	100
MsaG010569	MtrunA17_Chr1g0180591	51.250	80	39	0	9	88	2	81	5.21e-25	95.1
MsaG010569	MtrunA17_Chr1g0175601	41.441	111	63	2	9	118	2	111	1.72e-24	94.0
MsaG010569	MtrunA17_Chr8g0376821	57.971	69	29	0	9	77	2	70	9.45e-24	92.0
MsaG010569	MtrunA17_Chr1g0169761	57.971	69	29	0	9	77	2	70	1.14e-23	91.7
MsaG010569	MtrunA17_Chr4g0074101	39.655	116	54	2	9	108	2	117	1.20e-23	92.0
MsaG010569	MtrunA17_Chr1g0175611	50.633	79	39	0	9	87	2	80	2.61e-23	90.5
MsaG010569	MtrunA17_Chr8g0357771	56.522	69	30	0	9	77	2	70	1.59e-22	88.6
MsaG010569	MtrunA17_Chr4g0052061	41.905	105	60	1	9	113	2	105	1.94e-22	87.8
MsaG010569	MtrunA17_Chr8g0356071	40.909	110	60	2	9	117	2	107	7.26e-22	86.7
MsaG010569	MtrunA17_Chr4g0052081	42.453	106	59	1	9	112	2	107	1.43e-21	86.3
MsaG010569	MtrunA17_Chr3g0111831	65.574	61	21	0	16	76	11	71	2.01e-21	83.2
MsaG010569	MtrunA17_Chr4g0049901	46.392	97	43	2	10	98	29	124	4.28e-20	83.6
MsaG010569	MtrunA17_Chr8g0345001	34.641	153	96	3	8	158	17	167	4.57e-20	82.4
MsaG010569	MtrunA17_Chr5g0427401	50.000	68	34	0	9	76	2	69	8.81e-19	80.1
MsaG010569	MtrunA17_Chr8g0351051	46.835	79	40	1	9	85	2	80	5.30e-18	78.2
MsaG010569	MtrunA17_Chr3g0077501	48.529	68	35	0	9	76	2	69	5.59e-18	77.8
MsaG010569	MtrunA17_Chr4g0057151	50.746	67	33	0	10	76	3	69	6.99e-18	77.0
MsaG010569	MtrunA17_Chr8g0351041	49.275	69	35	0	10	78	3	71	1.08e-17	75.9
MsaG010569	MtrunA17_Chr4g0020221	50.000	68	34	0	9	76	2	69	1.30e-17	77.4
MsaG010569	MtrunA17_Chr5g0412461	32.624	141	83	4	10	144	3	137	1.48e-17	76.6
MsaG010569	MtrunA17_Chr3g0097101	36.000	125	79	1	3	126	11	135	1.86e-17	76.6
MsaG010569	MtrunA17_Chr5g0412271	49.275	69	34	1	10	77	3	71	3.29e-17	75.9
MsaG010569	MtrunA17_Chr8g0351031	49.275	69	35	0	10	78	3	71	4.73e-17	75.5
MsaG010569	MtrunA17_Chr2g0279821	47.059	68	36	0	9	76	2	69	4.86e-17	75.5
MsaG010569	MtrunA17_Chr1g0173161	52.459	61	29	0	9	69	2	62	6.78e-17	71.6
MsaG010569	MtrunA17_Chr1g0204111	50.000	68	34	0	9	76	18	85	7.73e-17	75.5
MsaG010569	MtrunA17_Chr7g0246431	49.254	67	34	0	10	76	3	69	8.63e-17	74.3
MsaG010569	MtrunA17_Chr3g0134451	40.594	101	58	2	9	108	2	101	9.45e-17	75.9
MsaG010569	MtrunA17_Chr4g0061691	44.928	69	37	1	9	76	2	70	1.50e-16	74.3
MsaG010569	MtrunA17_Chr2g0284911	33.577	137	89	2	9	144	17	152	1.63e-16	74.3
MsaG010569	MtrunA17_Chr2g0308251	44.444	72	39	1	9	79	2	73	1.75e-16	70.5
MsaG010569	MtrunA17_Chr6g0474371	46.377	69	36	1	9	76	2	70	1.90e-16	73.2
MsaG010569	MtrunA17_Chr5g0411691	47.059	68	36	0	9	76	2	69	3.13e-16	73.6
MsaG010569	MtrunA17_Chr8g0380021	34.746	118	76	1	9	125	18	135	4.25e-16	73.2
MsaG010569	MtrunA17_Chr7g0246381	49.254	67	29	1	9	70	2	68	5.19e-16	68.9
MsaG010569	MtrunA17_Chr4g0049541	41.772	79	46	0	9	87	2	80	1.21e-15	71.6
MsaG010569	MtrunA17_Chr8g0377561	51.786	56	27	0	9	64	2	57	1.87e-15	68.2
MsaG010569	MtrunA17_Chr5g0420091	51.786	56	27	0	9	64	2	57	3.25e-15	70.1
MsaG010569	MtrunA17_Chr4g0061671	49.123	57	29	0	9	65	2	58	3.67e-15	69.7
MsaG010569	MtrunA17_Chr6g0455511	44.928	69	37	1	9	76	2	70	4.14e-15	70.5
MsaG010569	MtrunA17_Chr1g0164791	47.143	70	35	1	9	76	2	71	5.52e-15	70.1
MsaG010569	MtrunA17_Chr8g0366231	50.877	57	28	0	9	65	2	58	6.27e-15	70.1
MsaG010569	MtrunA17_Chr7g0220111	44.928	69	37	1	9	76	2	70	6.34e-15	70.1
MsaG010569	MtrunA17_Chr7g0220121	42.029	69	39	1	9	76	2	70	6.42e-15	70.1
MsaG010569	MtrunA17_Chr5g0420081	50.000	56	28	0	9	64	2	57	7.58e-15	69.7
MsaG010569	MtrunA17_Chr1g0159661	47.458	59	31	0	9	67	2	60	1.23e-14	68.2
MsaG010569	MtrunA17_Chr5g0425191	56.604	53	23	0	9	61	2	54	1.50e-14	65.9
MsaG010569	MtrunA17_Chr5g0427921	45.763	59	32	0	9	67	2	60	1.52e-14	64.7
MsaG010569	MtrunA17_Chr3g0122251	53.571	56	26	0	9	64	2	57	1.55e-14	68.9
MsaG010569	MtrunA17_Chr4g0044071	52.632	57	27	0	9	65	2	58	2.11e-14	65.9
MsaG010569	MtrunA17_Chr3g0142191	32.716	162	88	7	9	165	2	147	2.83e-14	68.2
MsaG010569	MtrunA17_Chr5g0404951	47.143	70	35	1	9	76	2	71	4.16e-14	67.4
MsaG010569	MtrunA17_Chr3g0125241	42.857	70	38	1	9	76	27	96	5.40e-14	67.0
MsaG010569	MtrunA17_Chr4g0018421	42.857	70	39	1	9	77	2	71	1.67e-13	65.5
MsaG010569	MtrunA17_Chr3g0093131	30.370	135	92	2	26	158	36	170	5.24e-13	63.9
MsaG010569	MtrunA17_Chr1g0166611	36.792	106	55	2	20	122	17	113	6.59e-13	62.4
MsaG010569	MtrunA17_Chr4g0060841	41.333	75	42	1	9	81	2	76	3.77e-12	63.2
MsaG010569	MtrunA17_Chr5g0417661	41.667	72	36	1	9	80	57	122	7.62e-12	59.7
MsaG010569	MtrunA17_Chr4g0025531	39.080	87	53	0	1	87	1	87	1.07e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010569	AT5G60440.1	57.407	162	65	2	4	161	2	163	1.14e-55	177
MsaG010569	AT2G24840.1	47.468	158	71	3	9	159	63	215	1.19e-41	140
MsaG010569	AT4G36590.1	44.512	164	82	3	4	159	2	164	8.95e-39	132
MsaG010569	AT1G01530.1	47.468	158	77	3	5	159	3	157	2.92e-38	131
MsaG010569	AT1G65360.1	41.772	158	90	2	5	161	3	159	6.76e-36	124
MsaG010569	AT2G34440.1	36.735	147	92	1	9	155	2	147	3.58e-26	98.2
MsaG010569	AT3G66656.1	41.176	119	65	1	9	122	2	120	1.50e-23	91.7
MsaG010569	AT1G72350.1	33.544	158	73	3	9	166	43	168	5.76e-23	91.3
MsaG010569	AT3G04100.1	32.143	168	104	4	1	158	1	168	7.54e-23	90.5
MsaG010569	AT2G45660.2	34.161	161	87	5	10	159	3	155	2.81e-20	82.8
MsaG010569	AT4G24540.1	34.694	147	80	3	9	155	2	132	1.16e-19	82.4
MsaG010569	AT2G45660.1	34.161	161	87	5	10	159	3	155	1.28e-19	82.4
MsaG010569	AT4G09960.2	39.344	122	67	3	9	126	2	120	2.11e-19	81.6
MsaG010569	AT4G09960.1	39.344	122	67	3	9	126	2	120	2.51e-19	82.0
MsaG010569	AT4G09960.6	39.344	122	67	3	9	126	3	121	2.58e-19	82.0
MsaG010569	AT4G09960.5	39.344	122	67	3	9	126	12	130	3.41e-19	81.6
MsaG010569	AT4G09960.3	39.344	122	67	3	9	126	28	146	4.46e-19	81.6
MsaG010569	AT4G09960.4	39.344	122	67	3	9	126	97	215	8.60e-19	82.0
MsaG010569	AT2G45650.1	50.000	68	34	0	9	76	2	69	2.28e-18	79.7
MsaG010569	AT2G22540.3	50.746	67	33	0	10	76	3	69	7.70e-18	78.2
MsaG010569	AT2G22540.1	50.746	67	33	0	10	76	3	69	7.70e-18	78.2
MsaG010569	AT3G57230.2	45.588	68	37	0	9	76	2	69	8.41e-18	75.9
MsaG010569	AT5G51870.2	52.239	67	32	0	10	76	3	69	1.12e-17	76.3
MsaG010569	AT5G13790.2	51.471	68	33	0	9	76	2	69	1.14e-17	78.2
MsaG010569	AT5G13790.1	51.471	68	33	0	9	76	2	69	1.28e-17	78.2
MsaG010569	AT4G22950.2	50.746	67	33	0	10	76	3	69	1.46e-17	75.9
MsaG010569	AT5G51870.1	52.239	67	32	0	10	76	3	69	1.62e-17	76.6
MsaG010569	AT5G51870.5	50.000	72	36	0	5	76	21	92	1.85e-17	76.3
MsaG010569	AT5G51870.4	52.239	67	32	0	10	76	3	69	2.07e-17	76.6
MsaG010569	AT3G57390.3	48.529	68	35	0	9	76	2	69	2.60e-17	76.6
MsaG010569	AT5G51870.3	52.239	67	32	0	10	76	13	79	2.74e-17	76.3
MsaG010569	AT5G62165.17	32.680	153	98	3	10	158	3	154	2.89e-17	74.7
MsaG010569	AT5G62165.12	32.680	153	98	3	10	158	3	154	2.89e-17	74.7
MsaG010569	AT5G62165.11	32.680	153	98	3	10	158	3	154	2.89e-17	74.7
MsaG010569	AT1G29962.1	29.341	167	103	3	5	156	4	170	3.14e-17	75.5
MsaG010569	AT5G62165.14	49.254	67	34	0	10	76	3	69	4.02e-17	73.2
MsaG010569	AT4G18960.1	38.679	106	56	1	2	107	11	107	4.49e-17	76.3
MsaG010569	AT1G28460.1	30.625	160	104	4	5	160	4	160	4.56e-17	74.7
MsaG010569	AT3G57390.1	48.529	68	35	0	9	76	2	69	4.89e-17	76.3
MsaG010569	AT5G10140.2	50.725	69	33	1	9	76	2	70	6.04e-17	74.3
MsaG010569	AT4G22950.3	50.746	67	33	0	10	76	3	69	6.39e-17	75.1
MsaG010569	AT4G22950.1	50.746	67	33	0	10	76	3	69	6.39e-17	75.1
MsaG010569	AT3G57230.1	45.588	68	37	0	9	76	2	69	7.71e-17	75.5
MsaG010569	AT3G57230.4	45.588	68	37	0	9	76	2	69	7.71e-17	75.5
MsaG010569	AT4G37940.3	45.588	68	37	0	9	76	2	69	9.11e-17	73.9
MsaG010569	AT4G37940.1	45.588	68	37	0	9	76	2	69	9.41e-17	75.1
MsaG010569	AT5G10140.3	50.725	69	33	1	9	76	2	70	9.59e-17	73.9
MsaG010569	AT4G37940.4	45.588	68	37	0	9	76	2	69	9.90e-17	74.7
MsaG010569	AT5G62165.6	49.254	67	34	0	10	76	3	69	1.01e-16	73.2
MsaG010569	AT5G62165.9	49.254	67	34	0	10	76	3	69	1.01e-16	73.2
MsaG010569	AT5G62165.7	49.254	67	34	0	10	76	3	69	1.01e-16	73.2
MsaG010569	AT5G62165.8	49.254	67	34	0	10	76	3	69	1.01e-16	73.2
MsaG010569	AT5G62165.13	49.254	67	34	0	10	76	3	69	1.01e-16	73.2
MsaG010569	AT5G10140.4	50.725	69	33	1	9	76	2	70	1.20e-16	73.9
MsaG010569	AT5G51860.2	50.746	67	33	0	10	76	3	69	1.31e-16	73.9
MsaG010569	AT5G62165.3	49.254	67	34	0	10	76	3	69	1.45e-16	74.3
MsaG010569	AT5G62165.1	49.254	67	34	0	10	76	3	69	1.45e-16	74.3
MsaG010569	AT5G62165.2	49.254	67	34	0	10	76	3	69	1.45e-16	74.3
MsaG010569	AT5G62165.10	49.254	67	34	0	10	76	3	69	1.46e-16	73.9
MsaG010569	AT5G62165.4	49.254	67	34	0	10	76	3	69	1.46e-16	73.9
MsaG010569	AT5G10140.1	50.725	69	33	1	9	76	2	70	1.51e-16	73.9
MsaG010569	AT2G22540.2	58.182	55	23	0	10	64	3	57	1.62e-16	74.3
MsaG010569	AT5G51860.1	50.746	67	33	0	10	76	3	69	1.78e-16	73.9
MsaG010569	AT2G42830.1	47.297	74	38	1	3	76	12	84	2.17e-16	74.3
MsaG010569	AT2G42830.2	47.297	74	38	1	3	76	12	84	2.19e-16	74.3
MsaG010569	AT3G58780.1	32.948	173	106	5	3	167	12	182	3.04e-16	73.9
MsaG010569	AT3G58780.5	32.948	173	106	5	3	167	18	188	3.13e-16	73.9
MsaG010569	AT3G61120.1	40.909	88	50	1	9	94	2	89	4.53e-16	73.6
MsaG010569	AT4G11880.2	58.182	55	23	0	10	64	3	57	4.75e-16	72.0
MsaG010569	AT4G11880.3	58.182	55	23	0	10	64	3	57	4.75e-16	72.0
MsaG010569	AT3G30260.1	43.478	69	38	1	9	76	2	70	4.76e-16	73.6
MsaG010569	AT4G11880.4	57.143	56	24	0	10	65	3	58	7.78e-16	72.4
MsaG010569	AT4G11880.1	57.143	56	24	0	10	65	3	58	7.78e-16	72.4
MsaG010569	AT3G58780.4	47.297	74	38	1	3	76	12	84	1.04e-15	73.2
MsaG010569	AT2G14210.1	44.928	69	37	1	9	76	2	70	1.24e-15	72.0
MsaG010569	AT1G69120.2	39.535	86	44	2	9	86	2	87	1.39e-15	72.0
MsaG010569	AT2G14210.2	44.928	69	37	1	9	76	2	70	1.51e-15	72.0
MsaG010569	AT1G71692.1	46.377	69	36	1	10	77	3	71	1.83e-15	71.2
MsaG010569	AT5G65050.2	46.377	69	36	1	9	76	2	70	2.55e-15	70.1
MsaG010569	AT1G77980.1	48.611	72	36	1	9	79	2	73	2.67e-15	72.4
MsaG010569	AT1G69120.1	39.535	86	44	2	9	86	2	87	2.82e-15	71.6
MsaG010569	AT1G26310.1	44.928	69	37	1	9	76	2	70	2.94e-15	71.2
MsaG010569	AT1G77950.3	45.833	72	38	1	9	79	2	73	3.20e-15	71.2
MsaG010569	AT1G77950.2	45.833	72	38	1	9	79	2	73	3.20e-15	71.2
MsaG010569	AT1G77950.1	45.833	72	38	1	9	79	2	73	3.20e-15	71.2
MsaG010569	AT1G77950.4	45.833	72	38	1	9	79	2	73	3.20e-15	71.2
MsaG010569	AT5G60910.1	44.928	69	37	1	9	76	2	70	3.32e-15	71.2
MsaG010569	AT5G20240.2	48.387	62	32	0	9	70	2	63	4.35e-15	68.9
MsaG010569	AT1G22130.1	35.593	118	73	3	9	124	2	118	4.84e-15	71.6
MsaG010569	AT3G58780.2	51.562	64	30	1	3	66	12	74	5.58e-15	70.5
MsaG010569	AT3G54340.1	33.577	137	73	5	9	133	2	132	6.26e-15	70.1
MsaG010569	AT5G65050.3	46.377	69	36	1	9	76	2	70	7.30e-15	69.3
MsaG010569	AT2G03710.3	53.571	56	26	0	9	64	2	57	7.60e-15	68.9
MsaG010569	AT5G65050.5	46.377	69	36	1	9	76	2	70	7.64e-15	68.9
MsaG010569	AT3G58780.3	51.562	64	30	1	3	66	12	74	7.78e-15	70.5
MsaG010569	AT5G20240.1	43.836	73	39	1	9	79	2	74	8.04e-15	69.3
MsaG010569	AT5G65050.1	46.377	69	36	1	9	76	2	70	8.55e-15	68.9
MsaG010569	AT5G65060.3	46.377	69	36	1	9	76	2	70	8.87e-15	68.9
MsaG010569	AT5G65070.4	40.580	69	40	1	9	76	2	70	1.21e-14	67.8
MsaG010569	AT5G65060.2	46.377	69	36	1	9	76	2	70	1.32e-14	68.6
MsaG010569	AT5G65060.1	46.377	69	36	1	9	76	2	70	1.34e-14	68.6
MsaG010569	AT5G23260.4	55.000	60	27	0	5	64	14	73	1.36e-14	69.7
MsaG010569	AT5G23260.1	55.000	60	27	0	5	64	14	73	1.47e-14	69.7
MsaG010569	AT5G23260.2	57.143	56	24	0	9	64	2	57	1.73e-14	69.3
MsaG010569	AT5G15800.1	51.786	56	27	0	9	64	2	57	1.80e-14	69.3
MsaG010569	AT3G02310.2	51.786	56	27	0	9	64	2	57	1.91e-14	68.2
MsaG010569	AT5G23260.3	57.143	56	24	0	9	64	2	57	1.91e-14	68.9
MsaG010569	AT1G24260.1	51.786	56	27	0	9	64	2	57	2.03e-14	68.9
MsaG010569	AT1G24260.2	51.786	56	27	0	9	64	2	57	2.11e-14	68.9
MsaG010569	AT1G24260.3	51.786	56	27	0	9	64	2	57	2.20e-14	68.9
MsaG010569	AT5G65070.1	40.580	69	40	1	9	76	2	70	2.72e-14	67.8
MsaG010569	AT5G15800.2	51.786	56	27	0	9	64	2	57	2.93e-14	68.9
MsaG010569	AT1G17310.1	52.703	74	33	1	8	81	47	118	3.73e-14	67.8
MsaG010569	AT2G03710.2	53.571	56	26	0	9	64	2	57	3.88e-14	68.6
MsaG010569	AT2G03710.1	53.571	56	26	0	9	64	2	57	4.00e-14	68.6
MsaG010569	AT1G17310.2	34.868	152	64	3	8	159	58	174	4.40e-14	67.8
MsaG010569	AT3G02310.1	51.786	56	27	0	9	64	2	57	6.09e-14	67.8
MsaG010569	AT5G65070.2	40.580	69	40	1	9	76	2	70	7.26e-14	67.4
MsaG010569	AT5G65070.5	40.580	69	40	1	9	76	2	70	9.34e-14	66.6
MsaG010569	AT5G65070.3	47.368	57	30	0	9	65	2	58	1.17e-13	66.6
MsaG010569	AT1G28450.1	26.901	171	116	4	5	167	4	173	1.35e-13	65.9
MsaG010569	AT2G22630.1	42.647	68	39	0	9	76	2	69	1.44e-13	66.2
MsaG010569	AT2G22630.2	42.647	68	39	0	9	76	2	69	1.44e-13	66.2
MsaG010569	AT1G47760.1	40.299	67	40	0	9	75	2	68	2.18e-13	65.1
MsaG010569	AT5G49490.1	37.895	95	52	2	4	91	40	134	2.96e-13	66.2
MsaG010569	AT4G37435.1	48.214	56	29	0	9	64	2	57	5.39e-13	64.3
MsaG010569	AT1G18750.4	40.000	75	43	1	9	81	2	76	5.88e-13	65.9
MsaG010569	AT1G18750.3	40.000	75	43	1	9	81	2	76	6.85e-13	65.9
MsaG010569	AT1G18750.1	40.000	75	43	1	9	81	2	76	7.06e-13	65.9
MsaG010569	AT5G65080.3	40.580	69	40	1	9	76	9	77	1.13e-12	63.5
MsaG010569	AT2G03060.2	31.361	169	92	8	9	158	2	165	1.59e-12	64.7
MsaG010569	AT5G65080.2	48.148	54	28	0	9	62	9	62	1.78e-12	63.2
MsaG010569	AT2G03060.3	31.361	169	92	8	9	158	2	165	1.92e-12	64.3
MsaG010569	AT2G03060.7	31.361	169	92	8	9	158	2	165	1.92e-12	64.3
MsaG010569	AT2G03060.1	31.361	169	92	8	9	158	2	165	1.92e-12	64.3
MsaG010569	AT1G69540.2	28.070	171	103	6	9	166	2	165	7.21e-12	62.8
MsaG010569	AT1G69540.1	28.070	171	103	6	9	166	2	165	7.35e-12	62.8
MsaG010569	AT1G46408.1	42.857	77	40	2	10	82	5	81	2.69e-11	60.8
MsaG010569	AT5G49420.1	38.462	78	44	1	5	78	3	80	7.25e-11	59.7

Find 38 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAATTGCATGGTGTCGTTT+TGG	0.309643	2:-74984092	None:intergenic
TGGTGGGCTTGTCCAGTTGA+TGG	0.339908	2:+74984246	MsaT010569.1:CDS
TGAATTATTCAAGAAGGCTT+TGG	0.355319	2:+74984287	MsaT010569.1:CDS
CTCATCACCAATCTTCTTCT+CGG	0.374331	2:-74984187	None:intergenic
GTTTATGACCGTATCAAGAT+TGG	0.394972	2:-74984046	None:intergenic
TGGTAGATAGATTTGATTGT+AGG	0.421362	2:-74984860	None:intergenic
GTCCAGTTGATGGGATGAAT+AGG	0.429804	2:+74984256	MsaT010569.1:CDS
TCCCTATTCATCCCATCAAC+TGG	0.439721	2:-74984258	None:intergenic
TCCAGTTGATGGGATGAATA+GGG	0.440779	2:+74984257	MsaT010569.1:CDS
AGTGAGCTTTGCACCCTTTG+TGG	0.441727	2:+74983964	MsaT010569.1:CDS
ATGAAACGGAGGCTAAGTTT+TGG	0.455077	2:+74984226	MsaT010569.1:CDS
GGTGGGCTTGTCCAGTTGAT+GGG	0.465063	2:+74984247	MsaT010569.1:CDS
CTGGATGCCGAGAAGAAGAT+TGG	0.471167	2:+74984180	MsaT010569.1:CDS
AGCAGCATCTGCACCACAAA+GGG	0.492573	2:-74983977	None:intergenic
GCATTTCTTTGTGCTCGACA+TGG	0.494761	2:-74983845	None:intergenic
TTTATGACCGTATCAAGATT+GGG	0.500413	2:-74984045	None:intergenic
ATTATTCAAGAAGGCTTTGG+AGG	0.515397	2:+74984290	MsaT010569.1:CDS
TCAGCTTGAATTATTCAAGA+AGG	0.521408	2:+74984281	MsaT010569.1:CDS
GTGGGACGAGAGAAAGATAG+TGG	0.522741	2:-74984068	None:intergenic
CTTTCTCAAAGCGTCGTAGC+GGG	0.523572	2:+74983926	MsaT010569.1:CDS
ACAAAGGGTGCAAAGCTCAC+TGG	0.525840	2:-74983962	None:intergenic
TTGAGAAAGTCACTTGCAGA+TGG	0.532513	2:-74983912	None:intergenic
TGGTCATCCCAATCTTGATA+CGG	0.546833	2:+74984038	MsaT010569.1:CDS
GAGCAATTTGAGCAATGAAA+CGG	0.548852	2:+74984212	MsaT010569.1:CDS
TATCACACCAATTGTTAATG+TGG	0.580078	2:-74984880	None:intergenic
CTCGTTGTATTCTCACCTAG+TGG	0.580084	2:+74984000	MsaT010569.1:CDS
ATCAAGATTGGGATGACCAA+AGG	0.590577	2:-74984034	None:intergenic
TGTATTCTCACCTAGTGGAA+AGG	0.611194	2:+74984005	MsaT010569.1:CDS
AACTCAAATCAACAACACGC+TGG	0.622750	2:+74984161	MsaT010569.1:CDS
ATTCACGCACGTTGGCATTG+CGG	0.623964	2:-74984125	None:intergenic
AAGGAAAATACCTTTCCACT+AGG	0.624124	2:-74984015	None:intergenic
GAGCAGCATCTGCACCACAA+AGG	0.629318	2:-74983978	None:intergenic
AGCATTGAATTCACGCACGT+TGG	0.629675	2:-74984133	None:intergenic
CGACACCATGCAATTCATTG+AGG	0.645467	2:+74984098	MsaT010569.1:CDS
ACTTTCTCAAAGCGTCGTAG+CGG	0.659133	2:+74983925	MsaT010569.1:CDS
GTGAGCCTCAATGAATTGCA+TGG	0.661389	2:-74984103	None:intergenic
TCGAGCACAAAGAAATGCCG+AGG	0.664748	2:+74983850	MsaT010569.1:CDS
CAATTTGAGCAATGAAACGG+AGG	0.680444	2:+74984215	MsaT010569.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	74983847	74984888	74983847	ID=MsaG010569
Chr2	mRNA	74983847	74984888	74983847	ID=MsaT010569.1;Parent=MsaG010569
Chr2	exon	74983847	74984326	74983847	ID=MsaT010569.1.exon1;Parent=MsaT010569.1
Chr2	CDS	74983847	74984326	74983847	ID=cds.MsaT010569.1;Parent=MsaT010569.1
Chr2	exon	74984859	74984888	74984859	ID=MsaT010569.1.exon2;Parent=MsaT010569.1
Chr2	CDS	74984859	74984888	74984859	ID=cds.MsaT010569.1;Parent=MsaT010569.1

Gene Sequence

>MsaT010569.1

ATGTCGAGCACAAAGAAATGCCGAGGTCGCCAAAAGATCGAGATGAAAAAGATGAGCAACGAGAGCCATCTGCAAGTGACTTTCTCAAAGCGTCGTAGCGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTTTGTGGTGCAGATGCTGCTCTCGTTGTATTCTCACCTAGTGGAAAGGTATTTTCCTTTGGTCATCCCAATCTTGATACGGTCATAAACCACTATCTTTCTCTCGTCCCACCCCAAAACGACACCATGCAATTCATTGAGGCTCACCGCAATGCCAACGTGCGTGAATTCAATGCTCAACTAACTCAAATCAACAACACGCTGGATGCCGAGAAGAAGATTGGTGATGAGCTGAGCAATTTGAGCAATGAAACGGAGGCTAAGTTTTGGTGGGCTTGTCCAGTTGATGGGATGAATAGGGATCAGCTTGAATTATTCAAGAAGGCTTTGGAGGAGCTTAAGAAACTTGCCTACAATCAAATCTATCTACCACATTAA

Protein sequence

>MsaT010569.1

MSSTKKCRGRQKIEMKKMSNESHLQVTFSKRRSGLFKKASELCTLCGADAALVVFSPSGKVFSFGHPNLDTVINHYLSLVPPQNDTMQFIEAHRNANVREFNAQLTQINNTLDAEKKIGDELSNLSNETEAKFWWACPVDGMNRDQLELFKKALEELKKLAYNQIYLPH*