AlfalfaGEDB | MsaG010592

M. sativa ssp. caerulea / MsaG010592

KEGG: -
GO: -
PFAM: PF12171.11

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010592	XP_024631651.1	93.973	365	16	1	1	365	56	414	0.0	718

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010592	sp\|Q944L3\|IDD9_ARATH	84.314	153	24	0	1	153	63	215	2.06e-94	291

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010592	tr\|G7IKT3\|G7IKT3_MEDTR	93.973	365	16	1	1	365	56	414	0.0	718

TFs/TRs:

Gene ID	Type	Classification
MsaG010592	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000309	MsaG010592	0.819504	1.961752e-52	4.258423e-50
MsaG000382	MsaG010592	0.803959	4.579770e-49	6.777771e-47
MsaG001087	MsaG010592	0.803908	4.694300e-49	6.938702e-47
MsaG002973	MsaG010592	0.826144	5.670769e-54	1.472433e-51
MsaG003679	MsaG010592	0.800469	2.375809e-48	3.246421e-46
MsaG004041	MsaG010592	0.805201	2.530158e-49	3.853820e-47
MsaG004185	MsaG010592	0.800017	2.933317e-48	3.967624e-46
MsaG005018	MsaG010592	0.813250	4.848862e-51	8.970209e-49
MsaG006886	MsaG010592	0.807620	7.861836e-50	1.267744e-47
MsaG009050	MsaG010592	0.815407	1.626183e-51	3.176144e-49
MsaG009504	MsaG010592	0.800307	2.562164e-48	3.488229e-46
MsaG010592	MsaG011039	0.859877	5.993072e-63	4.637546e-60
MsaG010592	MsaG011357	0.811954	9.286128e-51	1.663470e-48
MsaG010592	MsaG013962	0.803445	5.850273e-49	8.555342e-47
MsaG010592	MsaG014468	0.807229	9.506812e-50	1.518729e-47
MsaG010592	MsaG015081	0.825991	6.161029e-54	1.592953e-51
MsaG010592	MsaG015216	0.804782	3.091964e-49	4.663960e-47
MsaG010592	MsaG016674	0.825925	6.387596e-54	1.648521e-51
MsaG010592	MsaG017269	0.839208	3.350987e-57	1.276026e-54
MsaG010592	MsaG017470	0.802249	1.030194e-48	1.465655e-46
MsaG010592	MsaG018123	0.839399	2.990709e-57	1.145646e-54
MsaG010592	MsaG018270	0.827502	2.696219e-54	7.270687e-52
MsaG010592	MsaG018309	0.809376	3.329487e-50	5.600736e-48
MsaG010592	MsaG020487	0.848996	8.142092e-60	4.264408e-57
MsaG010592	MsaG020488	0.816629	8.701523e-52	1.753145e-49
MsaG010592	MsaG021286	0.835502	2.948258e-56	1.002539e-53
MsaG010592	MsaG021544	0.804629	3.327312e-49	5.001028e-47
MsaG010592	MsaG021553	0.819435	2.034592e-52	4.408546e-50
MsaG010592	MsaG022551	0.823538	2.319685e-53	5.607466e-51
MsaG010592	MsaG023205	0.802535	9.001643e-49	1.289135e-46
MsaG010592	MsaG023761	0.802050	1.131506e-48	1.602496e-46
MsaG010592	MsaG023762	0.817424	5.778706e-52	1.188410e-49
MsaG010592	MsaG027650	0.807414	8.688757e-50	1.394224e-47
MsaG010592	MsaG028373	0.813674	3.916288e-51	7.322379e-49
MsaG010592	MsaG028758	0.864526	2.277010e-64	2.110865e-61
MsaG010592	MsaG028759	0.841455	8.722344e-58	3.564829e-55
MsaG010592	MsaG028804	0.832182	1.977274e-55	6.094899e-53
MsaG010592	MsaG029117	0.802046	1.133755e-48	1.605535e-46
MsaG010592	MsaG029483	0.806366	1.443909e-49	2.260302e-47
MsaG010592	MsaG029829	0.808984	4.036503e-50	6.726409e-48
MsaG010592	MsaG030158	0.818800	2.833051e-52	6.037105e-50
MsaG010592	MsaG031652	0.826444	4.812847e-54	1.260189e-51
MsaG010592	MsaG032101	0.805625	2.063502e-49	3.174219e-47
MsaG010592	MsaG035054	0.803851	4.822603e-49	7.119027e-47
MsaG010592	MsaG037009	0.823920	1.888851e-53	4.613523e-51
MsaG010592	MsaG040026	0.809760	2.756031e-50	4.679358e-48
MsaG010592	MsaG040649	0.818002	4.287871e-52	8.950466e-50
MsaG010592	MsaG043227	0.827747	2.356358e-54	6.398265e-52
MsaG010592	MsaG044002	0.810563	1.854154e-50	3.210112e-48
MsaG010592	MsaG044028	0.840282	1.765382e-57	6.953139e-55
MsaG010592	MsaG044333	0.807305	9.163269e-50	1.466535e-47
MsaG010592	MsaG044501	0.811261	1.311187e-50	2.309202e-48
MsaG010592	MsaG044885	0.827355	2.923479e-54	7.851085e-52
MsaG010592	MsaG045078	0.818421	3.450343e-52	7.280193e-50
MsaG010592	MsaG045576	0.811916	9.459499e-51	1.692999e-48
MsaG010592	MsaG046802	0.806374	1.438090e-49	2.251645e-47
MsaG010592	MsaG000837	0.814894	2.111428e-51	4.070678e-49
MsaG010592	MsaG007366	0.866235	6.635545e-65	6.587348e-62
MsaG010592	MsaG014863	0.801696	1.336576e-48	1.877766e-46
MsaG010592	MsaG015244	0.819626	1.840817e-52	4.008478e-50
MsaG010592	MsaG013378	0.802716	8.263412e-49	1.188272e-46
MsaG010592	MsaG013858	0.806563	1.312479e-49	2.064172e-47
MsaG010592	MsaG011654	0.849414	6.236641e-60	3.313622e-57
MsaG010592	MsaG013372	0.807801	7.196558e-50	1.165568e-47
MsaG010592	MsaG011352	0.811332	1.266019e-50	2.233503e-48
MsaG010592	MsaG019027	0.806346	1.457669e-49	2.280779e-47
MsaG010592	MsaG031811	0.827008	3.536619e-54	9.405619e-52
MsaG010592	MsaG032342	0.815006	1.995195e-51	3.857485e-49
MsaG010592	MsaG038711	0.817207	6.464131e-52	1.321978e-49
MsaG010592	MsaG037442	0.802337	9.882530e-49	1.408892e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010592	MtrunA17_Chr2g0326381	93.973	365	16	1	1	365	56	414	0.0	718
MsaG010592	MtrunA17_Chr4g0029521	52.941	340	121	11	1	318	62	384	7.00e-109	327
MsaG010592	MtrunA17_Chr1g0185121	62.736	212	66	2	1	205	64	269	6.49e-92	282
MsaG010592	MtrunA17_Chr1g0181381	79.739	153	31	0	1	153	62	214	2.91e-91	282
MsaG010592	MtrunA17_Chr1g0151351	43.316	374	151	9	1	331	65	420	2.26e-87	271
MsaG010592	MtrunA17_Chr2g0330171	84.397	141	21	1	1	141	70	209	2.40e-87	271
MsaG010592	MtrunA17_Chr7g0263941	62.736	212	61	6	1	198	58	265	6.31e-87	268
MsaG010592	MtrunA17_Chr8g0342421	85.000	140	20	1	1	140	86	224	8.11e-87	271
MsaG010592	MtrunA17_Chr4g0040571	54.373	263	84	8	1	253	63	299	3.49e-86	269
MsaG010592	MtrunA17_Chr1g0191991	75.316	158	36	2	1	158	87	241	2.75e-85	268
MsaG010592	MtrunA17_Chr7g0268961	80.851	141	26	1	1	141	46	185	3.59e-85	266
MsaG010592	MtrunA17_Chr8g0373541	80.000	140	27	1	1	140	57	195	1.33e-84	266
MsaG010592	MtrunA17_Chr1g0210821	80.714	140	26	1	1	140	68	206	1.48e-83	264
MsaG010592	MtrunA17_Chr1g0162971	72.727	165	40	3	1	165	65	224	1.61e-83	261
MsaG010592	MtrunA17_Chr1g0199101	82.014	139	24	1	1	139	71	208	1.63e-83	263
MsaG010592	MtrunA17_Chr1g0163001	80.714	140	26	1	1	140	67	205	2.01e-82	260
MsaG010592	MtrunA17_Chr3g0141431	73.881	134	35	0	1	134	46	179	1.04e-75	239
MsaG010592	MtrunA17_Chr2g0324991	83.193	119	19	1	1	119	16	133	1.11e-70	218
MsaG010592	MtrunA17_Chr8g0375521	59.848	132	52	1	1	131	51	182	1.85e-56	190
MsaG010592	MtrunA17_Chr6g0479921	59.848	132	51	2	1	131	53	183	3.01e-55	188
MsaG010592	MtrunA17_Chr2g0320341	37.594	133	70	3	8	127	246	378	6.48e-22	96.3
MsaG010592	MtrunA17_Chr3g0123941	37.162	148	77	5	8	148	139	277	6.87e-22	95.1
MsaG010592	MtrunA17_Chr1g0200421	37.778	135	73	4	7	130	252	386	2.15e-21	95.5
MsaG010592	MtrunA17_Chr5g0422571	39.706	136	72	5	4	130	112	246	3.98e-20	89.4
MsaG010592	MtrunA17_Chr4g0026521	34.694	147	85	4	5	144	130	272	9.61e-20	88.6
MsaG010592	MtrunA17_Chr8g0352011	38.060	134	74	4	5	130	178	310	3.98e-19	87.4
MsaG010592	MtrunA17_Chr2g0321291	37.313	134	75	4	5	130	145	277	6.71e-19	86.3
MsaG010592	MtrunA17_Chr1g0198651	35.766	137	76	4	5	130	114	249	8.68e-19	85.5
MsaG010592	MtrunA17_Chr7g0258011	36.567	134	76	4	5	130	188	320	1.03e-18	86.3
MsaG010592	MtrunA17_Chr8g0382121	36.641	131	73	4	7	127	126	256	1.25e-18	85.5
MsaG010592	MtrunA17_Chr4g0053341	38.060	134	72	5	6	130	87	218	1.27e-18	84.0
MsaG010592	MtrunA17_Chr1g0173841	36.567	134	76	4	5	130	227	359	3.49e-18	85.1
MsaG010592	MtrunA17_Chr2g0328921	35.821	134	77	4	5	130	150	282	9.32e-18	83.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG010592	AT3G45260.2	84.314	153	24	0	1	153	63	215	2.10e-95	291
MsaG010592	AT3G45260.1	84.314	153	24	0	1	153	63	215	2.10e-95	291
MsaG010592	AT5G03150.1	77.358	159	30	1	1	159	77	229	4.22e-90	280
MsaG010592	AT3G13810.6	87.857	140	17	0	1	140	75	214	7.23e-89	276
MsaG010592	AT3G13810.5	87.857	140	17	0	1	140	89	228	8.34e-89	276
MsaG010592	AT3G13810.3	87.857	140	17	0	1	140	81	220	9.37e-89	276
MsaG010592	AT3G13810.4	87.857	140	17	0	1	140	94	233	9.74e-89	276
MsaG010592	AT3G13810.1	87.857	140	17	0	1	140	94	233	9.74e-89	276
MsaG010592	AT3G13810.2	87.857	140	17	0	1	140	95	234	1.47e-88	276
MsaG010592	AT1G55110.3	73.939	165	43	0	1	165	87	251	1.50e-87	271
MsaG010592	AT1G55110.1	73.939	165	43	0	1	165	87	251	1.50e-87	271
MsaG010592	AT1G55110.2	73.939	165	43	0	1	165	87	251	1.50e-87	271
MsaG010592	AT3G50700.1	84.286	140	21	1	1	140	58	196	2.33e-87	271
MsaG010592	AT5G66730.1	84.286	140	21	1	1	140	56	194	9.02e-87	271
MsaG010592	AT5G60470.1	75.839	149	36	0	1	149	59	207	5.83e-86	267
MsaG010592	AT5G60470.2	75.839	149	36	0	1	149	68	216	1.00e-85	267
MsaG010592	AT5G60470.3	75.839	149	36	0	1	149	64	212	1.54e-85	266
MsaG010592	AT1G14580.1	79.861	144	28	1	1	144	77	219	4.80e-85	266
MsaG010592	AT1G14580.2	79.861	144	28	1	1	144	77	219	4.80e-85	266
MsaG010592	AT1G14580.3	79.861	144	28	1	1	144	91	233	8.17e-85	265
MsaG010592	AT1G03840.2	76.667	150	34	1	1	150	63	211	8.36e-85	266
MsaG010592	AT1G03840.1	76.667	150	34	1	1	150	65	213	1.04e-84	266
MsaG010592	AT4G02670.2	79.167	144	30	0	1	144	79	222	2.13e-84	262
MsaG010592	AT4G02670.1	79.167	144	30	0	1	144	77	220	2.44e-84	261
MsaG010592	AT2G02070.2	82.857	140	23	1	1	140	76	214	5.22e-84	267
MsaG010592	AT2G02070.1	82.857	140	23	1	1	140	76	214	5.22e-84	267
MsaG010592	AT5G44160.2	79.167	144	29	1	1	144	22	164	1.77e-83	260
MsaG010592	AT5G44160.1	79.167	144	29	1	1	144	61	203	2.24e-83	261
MsaG010592	AT2G02080.6	77.083	144	32	1	1	144	1	143	4.84e-83	259
MsaG010592	AT2G02080.2	77.083	144	32	1	1	144	1	143	4.84e-83	259
MsaG010592	AT2G02080.1	77.083	144	32	1	1	144	78	220	7.56e-83	261
MsaG010592	AT2G02080.4	77.083	144	32	1	1	144	78	220	7.56e-83	261
MsaG010592	AT2G02080.5	77.083	144	32	1	1	144	78	220	7.56e-83	261
MsaG010592	AT2G02080.3	77.083	144	32	1	1	144	78	220	7.56e-83	261
MsaG010592	AT1G25250.1	60.150	133	51	2	1	131	34	166	5.13e-56	187
MsaG010592	AT1G68130.1	59.848	132	52	1	1	131	65	196	8.15e-56	188
MsaG010592	AT1G25250.3	60.150	133	51	2	1	131	57	189	8.40e-56	187
MsaG010592	AT2G01940.1	57.463	134	56	1	1	133	68	201	3.55e-54	185
MsaG010592	AT2G01940.3	56.296	135	57	2	1	133	68	202	1.01e-50	176
MsaG010592	AT1G68130.2	60.000	110	43	1	23	131	1	110	4.88e-43	152
MsaG010592	AT1G25250.2	60.360	111	42	2	23	131	1	111	8.58e-43	151
MsaG010592	AT2G01940.2	57.143	112	47	1	23	133	1	112	3.01e-41	148
MsaG010592	AT1G34370.3	38.686	137	71	4	7	130	35	171	1.30e-21	94.0
MsaG010592	AT1G34370.2	38.686	137	71	4	7	130	245	381	2.63e-21	95.5
MsaG010592	AT1G34370.1	38.686	137	71	4	7	130	245	381	2.63e-21	95.5
MsaG010592	AT5G22890.1	34.211	152	78	4	8	146	219	361	2.52e-20	91.7
MsaG010592	AT1G13290.1	38.971	136	72	6	5	130	100	234	3.74e-19	87.4
MsaG010592	AT1G08290.1	36.765	136	74	5	5	130	179	312	1.75e-18	85.9
MsaG010592	AT1G51220.1	32.911	158	88	5	5	154	177	324	2.54e-18	85.5
MsaG010592	AT3G20880.1	34.058	138	82	4	1	130	251	387	4.07e-18	85.5
MsaG010592	AT3G57670.1	35.821	134	77	4	5	130	216	348	1.53e-17	83.6
MsaG010592	AT1G34790.1	37.594	133	74	4	6	130	145	276	4.25e-17	81.3

Find 82 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATATTCCTCATGGTTTATT+TGG	0.044366	2:+75317753	MsaT010592.1:CDS
ATGATGAGGAATGTTATTAT+TGG	0.266493	2:-75317829	None:intergenic
GATGAGAATGCACTAGAATT+TGG	0.273568	2:-75317861	None:intergenic
TTTGGGCTTAATCCGGAATA+TGG	0.274534	2:+75317771	MsaT010592.1:CDS
GACTTGGACATCCTTGTAAT+TGG	0.294387	2:-75318070	None:intergenic
AAACCATGAGGAATATTTCT+TGG	0.325294	2:-75317747	None:intergenic
GTCGATGTAGCTGTAGGTTT+TGG	0.340159	2:-75316688	None:intergenic
ATATTCCTCATGGTTTATTT+GGG	0.341816	2:+75317754	MsaT010592.1:CDS
TGATGAGGAATGTTATTATT+GGG	0.351177	2:-75317828	None:intergenic
TTAGACTTAGTCCACACTTT+TGG	0.355942	2:+75317903	MsaT010592.1:CDS
TGACCTGGCCCACCATATTC+CGG	0.356666	2:-75317783	None:intergenic
CAAAGGATTGTTTCCAAAGT+AGG	0.368638	2:-75317709	None:intergenic
AGAGCTTTAGGAGACCTAAC+AGG	0.369422	2:+75316818	MsaT010592.1:CDS
GAAACAAGCTGGAGGTGATT+AGG	0.369571	2:+75316744	MsaT010592.1:CDS
CCCATGAATGTTTCTTGACC+TGG	0.371544	2:-75317798	None:intergenic
CATGACCCTAGTAGAGCTTT+AGG	0.371731	2:+75316806	MsaT010592.1:CDS
TGGTGCACGCAGCTCTTCTC+TGG	0.394181	2:-75316785	None:intergenic
CAGGGCCTTCTGTGAATCCT+TGG	0.398148	2:+75317644	MsaT010592.1:CDS
TGGTTTATTTGGGCTTAATC+CGG	0.427189	2:+75317764	MsaT010592.1:CDS
TCTAGTGCATTCTCATCAAC+AGG	0.433625	2:+75317867	MsaT010592.1:CDS
AATATGCAGTTCAATCTGAT+TGG	0.433651	2:+75316906	MsaT010592.1:CDS
TTTCTTTGCTTAAGCTTCCA+TGG	0.433993	2:-75316725	None:intergenic
CCAGCAGTTATATCCTACTT+TGG	0.435367	2:+75317696	MsaT010592.1:CDS
ACGAACTTGCAAAGTGAGTT+TGG	0.438218	2:+75318326	MsaT010592.1:CDS
ACGAGAGATTTCCTTGGTGT+TGG	0.446714	2:+75318233	MsaT010592.1:CDS
AAGTTCGTGACAGATTCTAT+TGG	0.449453	2:-75318311	None:intergenic
AGGTCTCCTAAAGCTCTACT+AGG	0.450218	2:-75316812	None:intergenic
ATCAATGGTAATAATGATGC+TGG	0.454395	2:+75318128	MsaT010592.1:CDS
TGCAAACTTCGCACATGAAA+CGG	0.459921	2:-75316646	None:intergenic
TATTCTCACAACCAATTACA+AGG	0.462543	2:+75318059	MsaT010592.1:CDS
GAAACATCATTTACAAGTAG+TGG	0.476541	2:+75317978	MsaT010592.1:CDS
GGCTTAATCCGGAATATGGT+GGG	0.478513	2:+75317775	MsaT010592.1:CDS
AAACATCATTTACAAGTAGT+GGG	0.483248	2:+75317979	MsaT010592.1:CDS
CCAAAGTAGGATATAACTGC+TGG	0.487870	2:-75317696	None:intergenic
GGCCTTCTGTGAATCCTTGG+TGG	0.499806	2:+75317647	MsaT010592.1:CDS
GCCAGGTCAAGAAACATTCA+TGG	0.510496	2:+75317797	MsaT010592.1:CDS
AATCCGGAATATGGTGGGCC+AGG	0.511400	2:+75317780	MsaT010592.1:CDS
TAATTCATCCATTGTCCTTG+TGG	0.512587	2:-75317933	None:intergenic
CTTCATTGAAATTTCCTGCA+TGG	0.515978	2:-75318196	None:intergenic
GAAAGCACGGTGAGAAGAAG+TGG	0.517455	2:+75316861	MsaT010592.1:CDS
ACAACTACAAAGCTTATCAA+TGG	0.529480	2:+75318113	MsaT010592.1:CDS
TGCATTGTTGACACGTGACT+TGG	0.529889	2:-75318086	None:intergenic
AATTTCCTGCATGGTTACCT+TGG	0.532045	2:-75318187	None:intergenic
AAGGCTCATAGTAAGATTTG+TGG	0.535441	2:+75316929	MsaT010592.1:CDS
GTGGAAGGAAGTGCAAGAAT+AGG	0.537491	2:+75317666	MsaT010592.1:CDS
GCTGGAGGTGATTAGGAAGA+AGG	0.538892	2:+75316751	MsaT010592.1:CDS
ATGTGCGAAGTTTGCAACAA+GGG	0.539035	2:+75316653	MsaT010592.1:CDS
TGCAGTTCAATCTGATTGGA+AGG	0.545468	2:+75316910	MsaT010592.1:CDS
GCTTAAGCAAAGAAACAAGC+TGG	0.547884	2:+75316733	MsaT010592.1:CDS
GCACCAAGAAATATTCCTCA+TGG	0.553675	2:+75317744	MsaT010592.1:CDS
TTCTGTGAATCCTTGGTGGA+AGG	0.554955	2:+75317651	MsaT010592.1:CDS
TTCAACCAAGGTAACCATGC+AGG	0.557528	2:+75318182	MsaT010592.1:CDS
GTTTATTACCACAAGGACAA+TGG	0.558273	2:+75317925	MsaT010592.1:CDS
CTAAAGCTCTACTAGGGTCA+TGG	0.559412	2:-75316805	None:intergenic
AAGACAGCTTCTTAACTCAC+AGG	0.560625	2:+75317625	MsaT010592.1:CDS
GGGCTTAATCCGGAATATGG+TGG	0.562399	2:+75317774	MsaT010592.1:CDS
GACGAGGACACAATCTTCCA+TGG	0.563267	2:+75316708	MsaT010592.1:CDS
ATTGTGGCACACTATTCTCC+AGG	0.563269	2:+75316972	MsaT010592.1:CDS
CATGTGCGAAGTTTGCAACA+AGG	0.579589	2:+75316652	MsaT010592.1:CDS
AGTTTAACGAGAGATTTCCT+TGG	0.583180	2:+75318227	MsaT010592.1:CDS
GTTAAGAAATTGTTCAACCA+AGG	0.592811	2:+75318170	MsaT010592.1:CDS
GGTGCTTGAGTGTTGATCAA+AGG	0.593475	2:-75317726	None:intergenic
TTCCACCAAGGATTCACAGA+AGG	0.596080	2:-75317649	None:intergenic
GATTCTATTGGATTGAACCT+AGG	0.597877	2:-75318299	None:intergenic
GTCCTCGTCGATGTAGCTGT+AGG	0.600070	2:-75316694	None:intergenic
TATCATCTCTTGTTGCAACA+AGG	0.605854	2:-75318276	None:intergenic
TTTGGAAGATAACTATGATG+AGG	0.609010	2:-75317843	None:intergenic
AACTTGCAAAGTGAGTTTGG+TGG	0.611112	2:+75318329	MsaT010592.1:CDS
GGTCTCCTAAAGCTCTACTA+GGG	0.614831	2:-75316811	None:intergenic
CCAGGTCAAGAAACATTCAT+GGG	0.615197	2:+75317798	MsaT010592.1:CDS
GAGCTTTAGGAGACCTAACA+GGG	0.617009	2:+75316819	MsaT010592.1:CDS
AAAGAGTACAGATGTGATTG+TGG	0.617310	2:+75316956	MsaT010592.1:CDS
AAGCACTTTAGTAGAAAGCA+CGG	0.627488	2:+75316848	MsaT010592.1:CDS
GTGGTAATAAACCAAAAGTG+TGG	0.631454	2:-75317914	None:intergenic
AACATCATTTACAAGTAGTG+GGG	0.641231	2:+75317980	MsaT010592.1:CDS
TCTTGCACTTCCTTCCACCA+AGG	0.653269	2:-75317661	None:intergenic
AGACAGCTTCTTAACTCACA+GGG	0.684931	2:+75317626	MsaT010592.1:CDS
TGCAACAAGAGATGATACCT+AGG	0.687869	2:+75318282	MsaT010592.1:CDS
ATGAGTCATCTCCAACACCA+AGG	0.689337	2:-75318244	None:intergenic
TTAAGCCCAAATAAACCATG+AGG	0.695340	2:-75317759	None:intergenic
TAAGCAAAGAAACAAGCTGG+AGG	0.718484	2:+75316736	MsaT010592.1:CDS
AACCTACAGCTACATCGACG+AGG	0.721645	2:+75316692	MsaT010592.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	75316635	75318361	75316635	ID=MsaG010592
Chr2	mRNA	75316635	75318361	75316635	ID=MsaT010592.1;Parent=MsaG010592
Chr2	exon	75316635	75316993	75316635	ID=MsaT010592.1.exon1;Parent=MsaT010592.1
Chr2	CDS	75316635	75316993	75316635	ID=cds.MsaT010592.1;Parent=MsaT010592.1
Chr2	exon	75317623	75318361	75317623	ID=MsaT010592.1.exon2;Parent=MsaT010592.1
Chr2	CDS	75317623	75318361	75317623	ID=cds.MsaT010592.1;Parent=MsaT010592.1

Gene Sequence

>MsaT010592.1

ATGACAACGAACCGTTTCATGTGCGAAGTTTGCAACAAGGGTTTCAAGAGAGACCAAAACCTACAGCTACATCGACGAGGACACAATCTTCCATGGAAGCTTAAGCAAAGAAACAAGCTGGAGGTGATTAGGAAGAAGGTGTACGTGTGTCCAGAGAAGAGCTGCGTGCACCATGACCCTAGTAGAGCTTTAGGAGACCTAACAGGGATAAAAAAGCACTTTAGTAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGATAAGTGTTCTAAGAAATATGCAGTTCAATCTGATTGGAAGGCTCATAGTAAGATTTGTGGCACTAAAGAGTACAGATGTGATTGTGGCACACTATTCTCCAGGAAAGACAGCTTCTTAACTCACAGGGCCTTCTGTGAATCCTTGGTGGAAGGAAGTGCAAGAATAGGTTCAGTTCCAGCAGTTATATCCTACTTTGGAAACAATCCTTTGATCAACACTCAAGCACCAAGAAATATTCCTCATGGTTTATTTGGGCTTAATCCGGAATATGGTGGGCCAGGTCAAGAAACATTCATGGGAAATTTTCCCAATAATAACATTCCTCATCATAGTTATCTTCCAAATTCTAGTGCATTCTCATCAACAGGAGCAAACTCTGATTTAGACTTAGTCCACACTTTTGGTTTATTACCACAAGGACAATGGATGAATTACAAATACAATGATCAACATGCAGAAACATCATTTACAAGTAGTGGGGTTCTAAAGCTAGAACAACAACAAGAAGAAGACAAAATGCATGATTTGTCTCATTTATATTCTCACAACCAATTACAAGGATGTCCAAGTCACGTGTCAACAATGCAAACTACAACTACAAAGCTTATCAATGGTAATAATGATGCTGGTTTCAATAATATTGTTGATGTTAAGAAATTGTTCAACCAAGGTAACCATGCAGGAAATTTCAATGAAGATCAGTTGAGTTTAACGAGAGATTTCCTTGGTGTTGGAGATGACTCATTGAAGAGAACCTTGTTGCAACAAGAGATGATACCTAGGTTCAATCCAATAGAATCTGTCACGAACTTGCAAAGTGAGTTTGGTGGACACTATTGA

Protein sequence

>MsaT010592.1

MTTNRFMCEVCNKGFKRDQNLQLHRRGHNLPWKLKQRNKLEVIRKKVYVCPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYRCDCGTLFSRKDSFLTHRAFCESLVEGSARIGSVPAVISYFGNNPLINTQAPRNIPHGLFGLNPEYGGPGQETFMGNFPNNNIPHHSYLPNSSAFSSTGANSDLDLVHTFGLLPQGQWMNYKYNDQHAETSFTSSGVLKLEQQQEEDKMHDLSHLYSHNQLQGCPSHVSTMQTTTTKLINGNNDAGFNNIVDVKKLFNQGNHAGNFNEDQLSLTRDFLGVGDDSLKRTLLQQEMIPRFNPIESVTNLQSEFGGHY*