Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010770 | XP_024631646.1 | 99.054 | 317 | 1 | 1 | 1 | 317 | 1 | 315 | 0.0 | 655 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010770 | sp|Q8W031|ZWIP5_ARATH | 61.801 | 322 | 95 | 8 | 6 | 310 | 27 | 337 | 3.02e-130 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010770 | tr|A0A396JHF9|A0A396JHF9_MEDTR | 99.054 | 317 | 1 | 1 | 1 | 317 | 1 | 315 | 0.0 | 655 |
Gene ID | Type | Classification |
---|---|---|
MsaG010770 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000761 | MsaG010770 | 0.820499 | 1.164270e-52 | 2.594715e-50 |
MsaG003903 | MsaG010770 | 0.802719 | 8.250358e-49 | 1.186479e-46 |
MsaG004166 | MsaG010770 | 0.825643 | 7.448603e-54 | 1.907116e-51 |
MsaG005054 | MsaG010770 | 0.808685 | 4.674075e-50 | 7.733203e-48 |
MsaG006668 | MsaG010770 | 0.805775 | 1.919449e-49 | 2.962986e-47 |
MsaG008330 | MsaG010770 | 0.812150 | 8.417953e-51 | 1.515163e-48 |
MsaG010770 | MsaG011075 | 0.808095 | 6.237339e-50 | 1.017364e-47 |
MsaG010770 | MsaG011678 | 0.826078 | 5.878536e-54 | 1.523570e-51 |
MsaG010770 | MsaG012487 | 0.822661 | 3.706546e-53 | 8.749774e-51 |
MsaG010770 | MsaG012592 | 0.814211 | 2.985224e-51 | 5.657326e-49 |
MsaG010770 | MsaG014207 | 0.808419 | 5.323492e-50 | 8.750951e-48 |
MsaG010770 | MsaG015144 | 0.811832 | 9.867425e-51 | 1.762290e-48 |
MsaG010770 | MsaG015284 | 0.810842 | 1.614651e-50 | 2.814548e-48 |
MsaG010770 | MsaG016459 | 0.829427 | 9.294724e-55 | 2.646168e-52 |
MsaG010770 | MsaG017131 | 0.869908 | 4.422910e-66 | 5.105624e-63 |
MsaG010770 | MsaG017285 | 0.813952 | 3.402590e-51 | 6.406662e-49 |
MsaG010770 | MsaG019435 | 0.831071 | 3.704183e-55 | 1.105380e-52 |
MsaG010770 | MsaG021343 | 0.804092 | 4.299928e-49 | 6.383394e-47 |
MsaG010770 | MsaG024877 | 0.800290 | 2.582701e-48 | 3.514770e-46 |
MsaG010770 | MsaG025231 | 0.829783 | 7.619888e-55 | 2.191608e-52 |
MsaG010770 | MsaG028035 | 0.801617 | 1.387175e-48 | 1.945355e-46 |
MsaG010770 | MsaG028188 | 0.817299 | 6.164129e-52 | 1.263617e-49 |
MsaG010770 | MsaG028448 | 0.805703 | 1.987603e-49 | 3.063061e-47 |
MsaG010770 | MsaG029162 | 0.806462 | 1.378362e-49 | 2.162672e-47 |
MsaG010770 | MsaG029225 | 0.802042 | 1.136060e-48 | 1.608647e-46 |
MsaG010770 | MsaG029403 | 0.802071 | 1.120589e-48 | 1.587799e-46 |
MsaG010770 | MsaG030089 | 0.806731 | 1.210176e-49 | 1.910799e-47 |
MsaG010770 | MsaG030455 | 0.803762 | 5.030789e-49 | 7.411173e-47 |
MsaG010770 | MsaG032560 | 0.807220 | 9.546425e-50 | 1.524769e-47 |
MsaG010770 | MsaG032594 | 0.851892 | 1.263602e-60 | 7.312534e-58 |
MsaG010770 | MsaG033154 | 0.825222 | 9.358798e-54 | 2.368615e-51 |
MsaG010770 | MsaG033616 | 0.806435 | 1.396165e-49 | 2.189230e-47 |
MsaG010770 | MsaG033762 | 0.846251 | 4.596234e-59 | 2.195102e-56 |
MsaG010770 | MsaG034018 | 0.808227 | 5.847480e-50 | 9.568073e-48 |
MsaG010770 | MsaG034804 | 0.800490 | 2.351861e-48 | 3.215227e-46 |
MsaG010770 | MsaG034866 | 0.864664 | 2.062562e-64 | 1.922574e-61 |
MsaG010770 | MsaG035216 | 0.800916 | 1.927462e-48 | 2.660433e-46 |
MsaG010770 | MsaG035263 | 0.805310 | 2.400270e-49 | 3.665234e-47 |
MsaG010770 | MsaG037892 | 0.809831 | 2.661176e-50 | 4.526165e-48 |
MsaG010770 | MsaG038520 | 0.812878 | 5.845080e-51 | 1.071339e-48 |
MsaG010770 | MsaG038522 | 0.807199 | 9.644896e-50 | 1.539741e-47 |
MsaG010770 | MsaG039979 | 0.801201 | 1.686683e-48 | 2.343099e-46 |
MsaG010770 | MsaG040390 | 0.804292 | 3.907670e-49 | 5.828005e-47 |
MsaG010770 | MsaG041746 | 0.808196 | 5.935794e-50 | 9.705406e-48 |
MsaG010770 | MsaG041778 | 0.810582 | 1.836528e-50 | 3.181059e-48 |
MsaG010770 | MsaG044744 | 0.815256 | 1.755988e-51 | 3.416650e-49 |
MsaG010770 | MsaG044770 | 0.810885 | 1.580768e-50 | 2.758361e-48 |
MsaG010770 | MsaG045646 | 0.810115 | 2.313682e-50 | 3.962146e-48 |
MsaG010770 | MsaG045757 | 0.805359 | 2.344762e-49 | 3.584614e-47 |
MsaG010770 | MsaG046150 | 0.819137 | 2.376469e-52 | 5.109328e-50 |
MsaG010770 | MsaG046255 | 0.823695 | 2.132316e-53 | 5.176756e-51 |
MsaG010770 | MsaG046278 | 0.805739 | 1.953597e-49 | 3.013166e-47 |
MsaG010770 | MsaG046974 | 0.809481 | 3.161822e-50 | 5.332544e-48 |
MsaG010770 | MsaG002644 | 0.821398 | 7.250009e-53 | 1.654595e-50 |
MsaG010770 | MsaG019320 | 0.811528 | 1.148203e-50 | 2.035370e-48 |
MsaG010770 | MsaG028138 | 0.820083 | 1.448971e-52 | 3.193881e-50 |
MsaG010770 | MsaG027385 | 0.805668 | 2.021175e-49 | 3.112186e-47 |
MsaG010770 | MsaG031376 | 0.802034 | 1.140320e-48 | 1.614363e-46 |
MsaG010770 | MsaG029995 | 0.822563 | 3.906046e-53 | 9.196389e-51 |
MsaG010770 | MsaG032707 | 0.802514 | 9.091668e-49 | 1.301373e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010770 | MtrunA17_Chr2g0328921 | 99.054 | 317 | 1 | 1 | 1 | 317 | 1 | 315 | 0.0 | 655 |
MsaG010770 | MtrunA17_Chr7g0258011 | 66.319 | 288 | 72 | 5 | 44 | 313 | 67 | 347 | 6.07e-133 | 381 |
MsaG010770 | MtrunA17_Chr1g0173841 | 63.036 | 303 | 78 | 5 | 44 | 317 | 93 | 390 | 7.27e-133 | 383 |
MsaG010770 | MtrunA17_Chr8g0352011 | 64.931 | 288 | 80 | 8 | 44 | 314 | 55 | 338 | 7.40e-127 | 365 |
MsaG010770 | MtrunA17_Chr5g0422571 | 68.349 | 218 | 55 | 4 | 84 | 298 | 56 | 262 | 4.20e-108 | 316 |
MsaG010770 | MtrunA17_Chr2g0321291 | 60.166 | 241 | 85 | 3 | 73 | 307 | 67 | 302 | 3.43e-105 | 310 |
MsaG010770 | MtrunA17_Chr4g0026521 | 59.289 | 253 | 92 | 4 | 60 | 310 | 48 | 291 | 7.58e-103 | 303 |
MsaG010770 | MtrunA17_Chr1g0198651 | 78.261 | 161 | 32 | 1 | 135 | 292 | 99 | 259 | 1.73e-95 | 284 |
MsaG010770 | MtrunA17_Chr4g0053341 | 60.870 | 230 | 75 | 4 | 60 | 289 | 11 | 225 | 7.14e-94 | 278 |
MsaG010770 | MtrunA17_Chr1g0200421 | 39.597 | 149 | 80 | 5 | 145 | 286 | 245 | 390 | 1.30e-25 | 106 |
MsaG010770 | MtrunA17_Chr2g0320341 | 34.615 | 156 | 95 | 3 | 138 | 286 | 231 | 386 | 5.17e-22 | 95.5 |
MsaG010770 | MtrunA17_Chr4g0029521 | 35.971 | 139 | 80 | 4 | 145 | 282 | 61 | 191 | 1.51e-19 | 89.0 |
MsaG010770 | MtrunA17_Chr7g0268961 | 34.868 | 152 | 81 | 7 | 139 | 282 | 33 | 174 | 1.65e-19 | 89.0 |
MsaG010770 | MtrunA17_Chr8g0342421 | 30.151 | 199 | 116 | 8 | 97 | 282 | 26 | 214 | 2.42e-19 | 88.6 |
MsaG010770 | MtrunA17_Chr1g0199101 | 33.939 | 165 | 89 | 8 | 128 | 282 | 45 | 199 | 2.94e-19 | 88.2 |
MsaG010770 | MtrunA17_Chr8g0382121 | 38.849 | 139 | 78 | 6 | 153 | 286 | 127 | 263 | 3.10e-19 | 86.7 |
MsaG010770 | MtrunA17_Chr1g0151351 | 35.211 | 142 | 81 | 5 | 143 | 282 | 62 | 194 | 3.38e-19 | 87.8 |
MsaG010770 | MtrunA17_Chr1g0181381 | 34.247 | 146 | 87 | 4 | 138 | 282 | 54 | 191 | 4.74e-19 | 87.4 |
MsaG010770 | MtrunA17_Chr1g0185121 | 35.211 | 142 | 81 | 5 | 143 | 282 | 61 | 193 | 8.18e-19 | 86.7 |
MsaG010770 | MtrunA17_Chr1g0163001 | 32.927 | 164 | 92 | 6 | 128 | 282 | 41 | 195 | 8.53e-19 | 86.7 |
MsaG010770 | MtrunA17_Chr1g0210821 | 33.562 | 146 | 87 | 5 | 138 | 282 | 60 | 196 | 1.13e-18 | 86.7 |
MsaG010770 | MtrunA17_Chr2g0326381 | 34.247 | 146 | 87 | 4 | 138 | 282 | 48 | 185 | 1.19e-18 | 85.9 |
MsaG010770 | MtrunA17_Chr1g0191991 | 34.337 | 166 | 89 | 7 | 127 | 282 | 60 | 215 | 1.45e-18 | 86.3 |
MsaG010770 | MtrunA17_Chr1g0162971 | 35.252 | 139 | 80 | 5 | 145 | 282 | 64 | 193 | 1.46e-18 | 85.9 |
MsaG010770 | MtrunA17_Chr7g0263941 | 34.694 | 147 | 84 | 6 | 138 | 282 | 50 | 186 | 3.89e-18 | 84.3 |
MsaG010770 | MtrunA17_Chr2g0330171 | 32.877 | 146 | 88 | 4 | 138 | 282 | 62 | 198 | 5.35e-18 | 84.3 |
MsaG010770 | MtrunA17_Chr8g0373541 | 33.813 | 139 | 82 | 4 | 145 | 282 | 56 | 185 | 7.48e-18 | 84.0 |
MsaG010770 | MtrunA17_Chr3g0123941 | 35.152 | 165 | 93 | 7 | 153 | 313 | 139 | 293 | 8.82e-18 | 82.8 |
MsaG010770 | MtrunA17_Chr2g0324991 | 33.803 | 142 | 84 | 5 | 138 | 277 | 8 | 141 | 8.93e-17 | 76.3 |
MsaG010770 | MtrunA17_Chr4g0040571 | 31.507 | 146 | 90 | 4 | 138 | 282 | 55 | 191 | 1.28e-16 | 80.1 |
MsaG010770 | MtrunA17_Chr3g0141431 | 30.723 | 166 | 97 | 5 | 123 | 278 | 15 | 172 | 1.98e-16 | 79.3 |
MsaG010770 | MtrunA17_Chr8g0375521 | 30.986 | 142 | 87 | 5 | 143 | 281 | 48 | 181 | 7.38e-13 | 68.9 |
MsaG010770 | MtrunA17_Chr6g0479921 | 28.966 | 145 | 93 | 4 | 143 | 285 | 50 | 186 | 3.32e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010770 | AT1G51220.1 | 61.801 | 322 | 95 | 8 | 6 | 310 | 27 | 337 | 3.07e-131 | 377 |
MsaG010770 | AT3G57670.1 | 61.059 | 321 | 73 | 5 | 44 | 317 | 67 | 382 | 2.69e-127 | 369 |
MsaG010770 | AT3G20880.1 | 61.462 | 301 | 82 | 7 | 36 | 310 | 118 | 410 | 9.49e-123 | 358 |
MsaG010770 | AT1G13290.1 | 68.269 | 208 | 50 | 4 | 88 | 293 | 52 | 245 | 5.10e-102 | 301 |
MsaG010770 | AT1G34790.1 | 68.159 | 201 | 63 | 1 | 90 | 289 | 83 | 283 | 3.99e-100 | 297 |
MsaG010770 | AT1G08290.1 | 72.571 | 175 | 41 | 2 | 113 | 286 | 148 | 316 | 1.65e-94 | 284 |
MsaG010770 | AT1G34370.3 | 37.209 | 172 | 89 | 6 | 131 | 286 | 7 | 175 | 2.45e-26 | 105 |
MsaG010770 | AT1G34370.2 | 39.735 | 151 | 79 | 5 | 145 | 286 | 238 | 385 | 5.12e-26 | 108 |
MsaG010770 | AT1G34370.1 | 39.735 | 151 | 79 | 5 | 145 | 286 | 238 | 385 | 5.12e-26 | 108 |
MsaG010770 | AT5G22890.1 | 38.994 | 159 | 83 | 7 | 142 | 290 | 209 | 363 | 8.24e-23 | 97.8 |
MsaG010770 | AT2G02080.1 | 31.088 | 193 | 113 | 6 | 101 | 282 | 23 | 206 | 1.46e-20 | 92.4 |
MsaG010770 | AT2G02080.4 | 31.088 | 193 | 113 | 6 | 101 | 282 | 23 | 206 | 1.46e-20 | 92.4 |
MsaG010770 | AT2G02080.5 | 31.088 | 193 | 113 | 6 | 101 | 282 | 23 | 206 | 1.46e-20 | 92.4 |
MsaG010770 | AT2G02080.3 | 31.088 | 193 | 113 | 6 | 101 | 282 | 23 | 206 | 1.46e-20 | 92.4 |
MsaG010770 | AT1G14580.1 | 34.320 | 169 | 93 | 5 | 123 | 282 | 46 | 205 | 5.56e-20 | 90.5 |
MsaG010770 | AT1G14580.2 | 34.320 | 169 | 93 | 5 | 123 | 282 | 46 | 205 | 5.56e-20 | 90.5 |
MsaG010770 | AT1G14580.3 | 34.320 | 169 | 93 | 5 | 123 | 282 | 60 | 219 | 6.76e-20 | 90.5 |
MsaG010770 | AT1G55110.3 | 30.455 | 220 | 123 | 8 | 73 | 282 | 17 | 216 | 1.68e-19 | 89.0 |
MsaG010770 | AT1G55110.1 | 30.455 | 220 | 123 | 8 | 73 | 282 | 17 | 216 | 1.68e-19 | 89.0 |
MsaG010770 | AT1G55110.2 | 30.455 | 220 | 123 | 8 | 73 | 282 | 17 | 216 | 1.68e-19 | 89.0 |
MsaG010770 | AT5G03150.1 | 35.252 | 139 | 81 | 4 | 145 | 282 | 76 | 206 | 2.28e-19 | 89.0 |
MsaG010770 | AT5G66730.1 | 29.843 | 191 | 111 | 7 | 105 | 282 | 4 | 184 | 4.62e-19 | 87.8 |
MsaG010770 | AT2G02070.2 | 34.247 | 146 | 86 | 4 | 138 | 282 | 68 | 204 | 7.95e-19 | 87.4 |
MsaG010770 | AT2G02070.1 | 34.247 | 146 | 86 | 4 | 138 | 282 | 68 | 204 | 7.95e-19 | 87.4 |
MsaG010770 | AT2G02080.6 | 34.783 | 138 | 80 | 4 | 146 | 282 | 1 | 129 | 3.28e-18 | 85.1 |
MsaG010770 | AT2G02080.2 | 34.783 | 138 | 80 | 4 | 146 | 282 | 1 | 129 | 3.28e-18 | 85.1 |
MsaG010770 | AT1G03840.2 | 33.562 | 146 | 87 | 5 | 138 | 282 | 55 | 191 | 1.69e-17 | 83.2 |
MsaG010770 | AT1G03840.1 | 33.562 | 146 | 87 | 5 | 138 | 282 | 57 | 193 | 1.78e-17 | 83.2 |
MsaG010770 | AT5G44160.1 | 33.094 | 139 | 83 | 4 | 145 | 282 | 60 | 189 | 2.21e-17 | 82.8 |
MsaG010770 | AT3G45260.2 | 35.252 | 139 | 81 | 4 | 145 | 282 | 62 | 192 | 2.65e-17 | 82.4 |
MsaG010770 | AT3G45260.1 | 35.252 | 139 | 81 | 4 | 145 | 282 | 62 | 192 | 2.65e-17 | 82.4 |
MsaG010770 | AT5G44160.2 | 33.094 | 139 | 83 | 4 | 145 | 282 | 21 | 150 | 3.09e-17 | 82.4 |
MsaG010770 | AT5G60470.2 | 34.074 | 135 | 81 | 3 | 145 | 278 | 67 | 194 | 3.24e-17 | 82.4 |
MsaG010770 | AT5G60470.3 | 34.074 | 135 | 81 | 3 | 145 | 278 | 63 | 190 | 3.32e-17 | 82.4 |
MsaG010770 | AT5G60470.1 | 34.074 | 135 | 81 | 3 | 145 | 278 | 58 | 185 | 3.56e-17 | 82.0 |
MsaG010770 | AT3G50700.1 | 32.192 | 146 | 89 | 4 | 138 | 282 | 50 | 186 | 1.48e-16 | 80.5 |
MsaG010770 | AT4G02670.1 | 32.192 | 146 | 90 | 3 | 138 | 282 | 69 | 206 | 1.94e-16 | 79.7 |
MsaG010770 | AT4G02670.2 | 32.192 | 146 | 90 | 3 | 138 | 282 | 71 | 208 | 2.05e-16 | 79.7 |
MsaG010770 | AT3G13810.5 | 32.192 | 146 | 90 | 4 | 138 | 282 | 81 | 218 | 3.89e-16 | 79.3 |
MsaG010770 | AT3G13810.4 | 32.192 | 146 | 90 | 4 | 138 | 282 | 86 | 223 | 4.07e-16 | 79.3 |
MsaG010770 | AT3G13810.1 | 32.192 | 146 | 90 | 4 | 138 | 282 | 86 | 223 | 4.07e-16 | 79.3 |
MsaG010770 | AT3G13810.2 | 32.192 | 146 | 90 | 4 | 138 | 282 | 87 | 224 | 4.12e-16 | 79.3 |
MsaG010770 | AT3G13810.3 | 32.192 | 146 | 90 | 4 | 138 | 282 | 73 | 210 | 4.17e-16 | 79.3 |
MsaG010770 | AT3G13810.6 | 32.192 | 146 | 90 | 4 | 138 | 282 | 67 | 204 | 4.65e-16 | 79.0 |
Find 64 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGTTCCTCTTAGAGATTC+TGG | 0.183675 | 2:-77577583 | None:intergenic |
CCAATGACTTCAATGGTTAT+TGG | 0.191789 | 2:+77575606 | MsaT010770.1:CDS |
CAACACTTTCTACACATAAA+TGG | 0.204972 | 2:-77577742 | None:intergenic |
AAAGATCATATCAAGGCTTT+TGG | 0.250816 | 2:+77577868 | MsaT010770.1:CDS |
GGAAATGGACATAAAGCTTA+TGG | 0.262958 | 2:+77577889 | MsaT010770.1:CDS |
TATAGAATGGAGGGTTATTT+AGG | 0.265203 | 2:-77575634 | None:intergenic |
GTTACTGTGGCTTTGCATCT+AGG | 0.282488 | 2:+77575851 | MsaT010770.1:CDS |
AAAGATATGTTGTTACTATA+AGG | 0.326372 | 2:-77575662 | None:intergenic |
CATGTTGTTGTATCTATTGA+AGG | 0.358064 | 2:-77576059 | None:intergenic |
CATCATTTCCATGGAACTAA+AGG | 0.398872 | 2:-77575774 | None:intergenic |
AACTTTGGTATTGTTGTTGT+GGG | 0.402964 | 2:+77577818 | MsaT010770.1:CDS |
CCAATAACCATTGAAGTCAT+TGG | 0.409520 | 2:-77575606 | None:intergenic |
TGCAAAGCATTTGCAGTAAG+AGG | 0.436467 | 2:+77577763 | MsaT010770.1:CDS |
AGAATCTTCCTTTAGTTCCA+TGG | 0.448392 | 2:+77575766 | MsaT010770.1:CDS |
CTTCATATTCATCATTTCCA+TGG | 0.449667 | 2:-77575783 | None:intergenic |
TTACTGTGGCTTTGCATCTA+GGG | 0.458041 | 2:+77575852 | MsaT010770.1:CDS |
AAACTTTGGTATTGTTGTTG+TGG | 0.458245 | 2:+77577817 | MsaT010770.1:CDS |
GTCCACCAAATAAAATTAGC+AGG | 0.460803 | 2:+77575960 | MsaT010770.1:CDS |
CCATGTTATTGTTGTGCACC+TGG | 0.466023 | 2:+77577628 | MsaT010770.1:CDS |
ATTGAAGTCATTGGAGAAGT+AGG | 0.466777 | 2:-77575597 | None:intergenic |
ACCCCTGCTCAGATTCTAAT+CGG | 0.468227 | 2:+77576001 | MsaT010770.1:CDS |
TCTCTTGGAGGTGGAGATGA+AGG | 0.479256 | 2:-77575695 | None:intergenic |
AAAGGAAGAGCTTCTCTTGG+AGG | 0.486389 | 2:-77575707 | None:intergenic |
AAATCAGATGAACTTATACT+TGG | 0.487140 | 2:-77575878 | None:intergenic |
AAAATATATAGATGCATATG+TGG | 0.490811 | 2:+77577533 | MsaT010770.1:intron |
AGCAAAGGAAGAGCTTCTCT+TGG | 0.490887 | 2:-77575710 | None:intergenic |
TACTTCTCCAATGACTTCAA+TGG | 0.492298 | 2:+77575599 | MsaT010770.1:CDS |
TTGAAGGTCTTGAAACAAAG+AGG | 0.499110 | 2:-77576043 | None:intergenic |
AAATTAGCAGGGGTCAGTAT+TGG | 0.506191 | 2:+77575972 | MsaT010770.1:CDS |
TAAGGAAAATTATAGAATGG+AGG | 0.508828 | 2:-77575644 | None:intergenic |
GGACCGATTAGAATCTGAGC+AGG | 0.523985 | 2:-77576004 | None:intergenic |
CATGGAAATGATGAATATGA+AGG | 0.524476 | 2:+77575784 | MsaT010770.1:CDS |
GGAAGAGCTTCTCTTGGAGG+TGG | 0.534319 | 2:-77575704 | None:intergenic |
ATCACTTAAAGATCATATCA+AGG | 0.535427 | 2:+77577861 | MsaT010770.1:CDS |
ACATGGATCACAATATAGAA+AGG | 0.537364 | 2:+77577558 | MsaT010770.1:CDS |
CTATAAGGAAAATTATAGAA+TGG | 0.547263 | 2:-77575647 | None:intergenic |
CCAGGTGCACAACAATAACA+TGG | 0.547993 | 2:-77577628 | None:intergenic |
AAATATATAGATGCATATGT+GGG | 0.547995 | 2:+77577534 | MsaT010770.1:intron |
ATTAGAATCTGAGCAGGGGT+AGG | 0.550899 | 2:-77575998 | None:intergenic |
AAGGAAAATTATAGAATGGA+GGG | 0.551334 | 2:-77575643 | None:intergenic |
TTGAAGTCATTGGAGAAGTA+GGG | 0.551474 | 2:-77575596 | None:intergenic |
TCAATGTTGTTCTTGCATCC+AGG | 0.558572 | 2:-77577646 | None:intergenic |
AGAGGGCATGAAAACTGTGT+TGG | 0.560971 | 2:-77576025 | None:intergenic |
CATGGATCACAATATAGAAA+GGG | 0.565142 | 2:+77577559 | MsaT010770.1:CDS |
ACACATTACAAGAGAAAGCA+TGG | 0.565234 | 2:+77577712 | MsaT010770.1:CDS |
GGGAGTCTTAGCATTGCTGT+TGG | 0.566939 | 2:-77577607 | None:intergenic |
TTAGAATCTGAGCAGGGGTA+GGG | 0.569587 | 2:-77575997 | None:intergenic |
TAGATGCATATGTGGGGACA+TGG | 0.582440 | 2:+77577541 | MsaT010770.1:intron |
AAGGGACCAGAATCTCTAAG+AGG | 0.583893 | 2:+77577577 | MsaT010770.1:CDS |
TCCACCAAATAAAATTAGCA+GGG | 0.584942 | 2:+77575961 | MsaT010770.1:CDS |
AGTGTTCTAAAATCTTTGAG+TGG | 0.612744 | 2:-77577685 | None:intergenic |
TGAAGGTCTTGAAACAAAGA+GGG | 0.613383 | 2:-77576042 | None:intergenic |
GTAGGGCTTAGGTTAAGCAA+AGG | 0.619991 | 2:-77575725 | None:intergenic |
GACCGATTAGAATCTGAGCA+GGG | 0.623713 | 2:-77576003 | None:intergenic |
CATTTGCAGTAAGAGGTGAC+TGG | 0.624837 | 2:+77577770 | MsaT010770.1:CDS |
AGATGATGATGCCGTTACTG+TGG | 0.634808 | 2:+77575838 | MsaT010770.1:CDS |
CAATAGATACAACAACATGC+AGG | 0.643534 | 2:+77576063 | MsaT010770.1:CDS |
TAGATGCAAAGCCACAGTAA+CGG | 0.646015 | 2:-77575849 | None:intergenic |
CAAGATCAAGATGATGAACA+TGG | 0.669051 | 2:+77577931 | MsaT010770.1:CDS |
AATATATAGATGCATATGTG+GGG | 0.677061 | 2:+77577535 | MsaT010770.1:intron |
CCACCAAATAAAATTAGCAG+GGG | 0.685279 | 2:+77575962 | MsaT010770.1:CDS |
ACCGATTAGAATCTGAGCAG+GGG | 0.690964 | 2:-77576002 | None:intergenic |
CAGGTGCACAACAATAACAT+GGG | 0.695885 | 2:-77577627 | None:intergenic |
GATCAAGATGATGAACATGG+TGG | 0.762207 | 2:+77577934 | MsaT010770.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 77575584 | 77577996 | 77575584 | ID=MsaG010770 |
Chr2 | mRNA | 77575584 | 77577996 | 77575584 | ID=MsaT010770.1;Parent=MsaG010770 |
Chr2 | exon | 77575584 | 77576084 | 77575584 | ID=MsaT010770.1.exon1;Parent=MsaT010770.1 |
Chr2 | CDS | 77575584 | 77576084 | 77575584 | ID=cds.MsaT010770.1;Parent=MsaT010770.1 |
Chr2 | exon | 77577544 | 77577996 | 77577544 | ID=MsaT010770.1.exon2;Parent=MsaT010770.1 |
Chr2 | CDS | 77577544 | 77577996 | 77577544 | ID=cds.MsaT010770.1;Parent=MsaT010770.1 |
Gene Sequence |
Protein sequence |