AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG010775

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010775 MtrunA17_Chr2g0329011 85.156 384 21 8 1 350 1 382 0.0 600
MsaG010775 MtrunA17_Chr4g0032761 56.927 397 94 11 6 326 4 399 1.40e-138 400
MsaG010775 MtrunA17_Chr8g0338741 40.845 355 144 6 9 302 12 361 8.32e-79 247
MsaG010775 MtrunA17_Chr7g0234641 37.746 355 157 5 10 305 6 355 1.21e-71 229
MsaG010775 MtrunA17_Chr4g0030361 39.210 329 142 7 8 299 300 607 1.42e-64 216
MsaG010775 MtrunA17_Chr1g0179101 36.490 359 156 7 12 302 467 821 1.38e-62 214
MsaG010775 MtrunA17_Chr3g0080101 34.961 389 174 10 11 324 411 795 2.46e-62 212
MsaG010775 MtrunA17_Chr4g0063311 35.829 374 155 7 12 303 88 458 1.65e-60 201
MsaG010775 MtrunA17_Chr8g0369091 45.570 237 109 3 68 300 682 902 6.33e-60 207
MsaG010775 MtrunA17_Chr8g0356291 35.772 369 161 10 8 306 120 482 1.58e-59 200
MsaG010775 MtrunA17_Chr2g0290691 35.068 365 159 9 12 302 201 561 7.85e-59 199
MsaG010775 MtrunA17_Chr2g0327561 39.450 327 151 7 10 299 621 937 8.16e-59 204
MsaG010775 MtrunA17_Chr7g0266031 34.037 379 171 8 12 322 489 856 1.38e-58 203
MsaG010775 MtrunA17_Chr2g0309421 35.106 376 164 10 1 306 165 530 1.61e-57 196
MsaG010775 MtrunA17_Chr2g0321101 41.245 257 118 5 68 292 177 432 1.75e-56 190
MsaG010775 MtrunA17_Chr8g0335351 35.345 348 156 7 12 292 367 712 1.02e-55 194
MsaG010775 MtrunA17_Chr7g0250631 34.933 375 161 10 11 312 360 724 1.50e-55 193
MsaG010775 MtrunA17_Chr7g0227331 32.877 365 167 8 12 302 229 589 2.43e-55 191
MsaG010775 MtrunA17_Chr2g0312641 37.612 335 154 10 12 299 91 417 3.86e-53 182
MsaG010775 MtrunA17_Chr2g0285711 34.366 355 166 11 12 302 74 425 1.36e-52 180
MsaG010775 MtrunA17_Chr8g0381091 33.333 357 169 12 12 302 70 423 4.01e-52 179
MsaG010775 MtrunA17_Chr6g0449401 31.156 398 160 10 12 302 260 650 3.10e-50 177
MsaG010775 MtrunA17_Chr4g0059751 30.303 363 158 12 20 339 92 402 2.60e-41 149
MsaG010775 MtrunA17_Chr6g0478601 29.188 394 196 13 3 348 97 455 1.22e-40 149
MsaG010775 MtrunA17_Chr5g0428981 35.909 220 123 5 88 303 864 1069 1.57e-37 143
MsaG010775 MtrunA17_Chr4g0018201 35.909 220 123 5 88 303 860 1065 3.23e-37 142
MsaG010775 MtrunA17_Chr7g0245031 36.000 225 98 4 81 302 242 423 1.47e-36 137
MsaG010775 MtrunA17_Chr1g0167311 28.035 346 178 9 12 306 110 435 2.83e-31 123
MsaG010775 MtrunA17_Chr2g0299781 33.603 247 132 10 68 294 196 430 1.74e-30 121
MsaG010775 MtrunA17_Chr3g0135951 29.091 385 191 16 12 339 89 448 2.51e-30 120
MsaG010775 MtrunA17_Chr1g0153321 34.583 240 134 9 68 295 191 419 5.54e-30 120
MsaG010775 MtrunA17_Chr1g0183651 33.469 245 140 8 88 321 221 453 5.24e-29 117
MsaG010775 MtrunA17_Chr1g0187581 30.588 255 146 8 81 318 211 451 1.59e-27 113
MsaG010775 MtrunA17_Chr1g0167351 28.977 352 190 14 15 319 108 446 8.87e-27 110
MsaG010775 MtrunA17_Chr6g0486661 31.330 233 110 6 82 309 855 1042 5.33e-26 109
MsaG010775 MtrunA17_Chr7g0261491 31.518 257 133 10 88 321 221 457 8.83e-25 105
MsaG010775 MtrunA17_Chr1g0197721 31.455 213 112 3 88 298 152 332 1.13e-23 101
MsaG010775 MtrunA17_Chr7g0274941 26.756 299 136 7 10 269 9 263 5.57e-22 94.4
MsaG010775 MtrunA17_Chr3g0125381 30.622 209 92 6 82 285 47 207 8.60e-21 89.4
MsaG010775 MtrunA17_Chr8g0351491 25.589 297 135 7 10 269 9 256 4.13e-20 89.0
MsaG010775 MtrunA17_Chr3g0140631 26.460 291 132 7 14 269 34 277 8.68e-20 88.2
MsaG010775 MtrunA17_Chr8g0353621 25.000 296 140 6 10 270 3 251 1.82e-19 87.0
MsaG010775 MtrunA17_Chr3g0129721 29.032 217 97 6 79 286 117 285 3.22e-19 86.7
MsaG010775 MtrunA17_Chr1g0190131 26.408 284 127 7 23 269 15 253 6.15e-19 85.5
MsaG010775 MtrunA17_Chr2g0286501 28.099 242 123 8 68 306 126 319 3.97e-18 85.9
MsaG010775 MtrunA17_Chr7g0267751 27.000 200 90 5 94 285 243 394 4.67e-14 73.2
MsaG010775 MtrunA17_Chr2g0330211 25.630 238 131 8 68 288 100 308 2.23e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG010775 AT1G51170.1 51.523 394 136 8 7 347 13 404 1.40e-121 356
MsaG010775 AT3G20830.1 51.768 396 131 8 12 350 16 408 1.34e-120 354
MsaG010775 AT3G25250.1 43.678 348 137 7 12 307 12 352 6.60e-83 258
MsaG010775 AT4G13000.1 42.012 338 145 6 12 306 15 344 1.49e-80 250
MsaG010775 AT2G36350.1 36.712 365 154 7 12 302 554 915 1.83e-63 217
MsaG010775 AT5G58140.6 37.798 336 143 8 8 300 568 880 5.68e-61 210
MsaG010775 AT5G58140.7 37.798 336 143 8 8 300 568 880 5.68e-61 210
MsaG010775 AT5G58140.5 37.798 336 143 8 8 300 568 880 5.68e-61 210
MsaG010775 AT5G58140.2 37.798 336 143 8 8 300 568 880 5.68e-61 210
MsaG010775 AT5G58140.1 37.798 336 143 8 8 300 568 880 5.68e-61 210
MsaG010775 AT5G58140.3 38.182 330 138 8 8 294 568 874 3.16e-60 208
MsaG010775 AT5G55910.2 35.967 367 160 8 12 306 104 467 6.35e-60 201
MsaG010775 AT5G55910.1 35.967 367 160 8 12 306 104 467 6.35e-60 201
MsaG010775 AT5G47750.1 36.364 363 155 10 12 302 186 544 1.07e-59 202
MsaG010775 AT1G79250.1 34.987 383 168 9 12 316 141 520 1.27e-59 201
MsaG010775 AT1G79250.3 34.987 383 168 9 12 316 141 520 1.27e-59 201
MsaG010775 AT1G79250.2 34.987 383 168 9 12 316 141 520 1.27e-59 201
MsaG010775 AT1G79250.4 34.987 383 168 9 12 316 141 520 1.27e-59 201
MsaG010775 AT3G52890.2 36.220 381 157 10 12 316 533 903 6.50e-59 204
MsaG010775 AT3G52890.4 36.220 381 157 10 12 316 533 903 6.50e-59 204
MsaG010775 AT3G52890.1 36.220 381 157 10 12 316 533 903 6.50e-59 204
MsaG010775 AT3G52890.3 36.220 381 157 10 12 316 533 903 6.50e-59 204
MsaG010775 AT3G45780.2 38.602 329 149 6 8 299 654 966 6.85e-59 205
MsaG010775 AT3G45780.1 38.602 329 149 6 8 299 654 966 6.85e-59 205
MsaG010775 AT3G12690.1 36.261 353 157 9 12 302 180 526 1.39e-58 199
MsaG010775 AT3G12690.3 36.261 353 157 9 12 302 180 526 1.39e-58 199
MsaG010775 AT3G12690.2 36.261 353 157 9 12 302 180 526 1.39e-58 199
MsaG010775 AT5G40030.1 36.288 361 163 10 10 306 107 464 4.78e-58 196
MsaG010775 AT3G44610.1 41.379 261 116 5 68 292 162 421 1.19e-57 193
MsaG010775 AT4G26610.1 36.339 366 156 9 12 306 118 477 1.97e-57 194
MsaG010775 AT1G16440.1 34.177 395 184 10 12 349 108 483 7.06e-57 192
MsaG010775 AT2G44830.2 36.111 360 158 9 12 302 358 714 2.34e-56 196
MsaG010775 AT2G44830.3 36.111 360 158 9 12 302 358 714 2.34e-56 196
MsaG010775 AT2G44830.1 36.111 360 158 9 12 302 358 714 2.34e-56 196
MsaG010775 AT5G03640.2 35.440 364 158 8 12 302 536 895 2.47e-56 197
MsaG010775 AT5G03640.1 35.440 364 158 8 12 302 536 895 2.47e-56 197
MsaG010775 AT2G34650.1 34.195 348 172 8 10 303 68 412 4.54e-55 186
MsaG010775 AT1G53700.1 36.950 341 170 6 3 301 79 416 1.26e-54 186
MsaG010775 AT3G27580.2 33.795 361 165 8 12 302 177 533 2.82e-54 187
MsaG010775 AT3G27580.1 33.795 361 165 8 12 302 177 533 2.82e-54 187
MsaG010775 AT3G14370.1 36.127 346 153 10 8 299 79 410 1.31e-52 181
MsaG010775 AT3G08730.1 30.183 328 144 10 12 302 129 408 2.00e-38 142
MsaG010775 AT3G08730.2 30.183 328 144 10 12 302 129 408 2.00e-38 142
MsaG010775 AT3G17850.1 27.949 390 194 14 3 332 869 1231 3.58e-38 145
MsaG010775 AT1G48490.4 28.869 336 182 8 12 311 824 1138 3.82e-38 145
MsaG010775 AT1G48490.3 28.869 336 182 8 12 311 823 1137 3.96e-38 145
MsaG010775 AT1G48490.2 28.869 336 182 8 12 311 823 1137 3.96e-38 145
MsaG010775 AT1G48490.1 28.869 336 182 8 12 311 823 1137 3.96e-38 145
MsaG010775 AT3G08720.1 29.912 341 152 9 2 303 123 415 1.01e-37 141
MsaG010775 AT3G08720.3 29.912 341 152 9 2 303 123 415 1.01e-37 141
MsaG010775 AT3G08720.4 29.912 341 152 9 2 303 123 415 1.01e-37 141
MsaG010775 AT3G08720.2 29.912 341 152 9 2 303 123 415 1.01e-37 141
MsaG010775 AT5G62310.1 27.873 409 204 14 3 350 739 1117 1.22e-37 144
MsaG010775 AT1G45160.2 30.539 334 163 10 12 302 665 972 9.34e-36 138
MsaG010775 AT1G45160.1 31.118 331 165 10 12 302 665 972 9.89e-36 138
MsaG010775 AT2G19400.1 35.443 237 125 8 79 295 197 425 1.33e-33 130
MsaG010775 AT3G10540.1 32.719 217 112 3 88 302 146 330 8.47e-33 127
MsaG010775 AT5G04510.2 33.641 217 110 5 88 302 145 329 3.87e-32 124
MsaG010775 AT5G04510.1 32.258 217 113 3 88 302 145 329 7.90e-32 125
MsaG010775 AT2G26700.1 45.652 138 64 2 183 310 354 490 9.25e-32 125
MsaG010775 AT2G26700.1 36.709 158 66 2 12 135 82 239 3.76e-22 97.8
MsaG010775 AT1G30640.3 29.446 343 179 13 10 303 20 348 3.54e-30 120
MsaG010775 AT1G30640.2 29.532 342 178 13 10 302 113 440 5.92e-30 120
MsaG010775 AT1G30640.1 29.532 342 178 13 10 302 113 440 5.92e-30 120
MsaG010775 AT4G33080.2 33.040 227 125 5 88 295 195 413 2.52e-29 118
MsaG010775 AT4G33080.1 33.040 227 125 5 88 295 195 413 2.53e-29 118
MsaG010775 AT3G23310.1 28.158 380 192 15 12 335 115 469 4.23e-29 118
MsaG010775 AT5G09890.2 31.559 263 149 10 68 314 185 432 5.25e-28 114
MsaG010775 AT5G09890.1 31.559 263 149 10 68 314 185 432 6.10e-28 114
MsaG010775 AT2G20050.2 30.870 230 110 4 85 309 877 1062 4.22e-27 113
MsaG010775 AT2G20050.1 30.870 230 110 4 85 309 880 1065 4.39e-27 113
MsaG010775 AT4G14350.2 28.406 345 178 13 12 306 114 439 4.50e-27 112
MsaG010775 AT4G14350.1 28.406 345 178 13 12 306 114 439 4.50e-27 112
MsaG010775 AT4G14350.4 28.406 345 178 13 12 306 114 439 4.50e-27 112
MsaG010775 AT4G14350.3 28.116 345 179 12 12 306 114 439 4.83e-27 112
MsaG010775 AT1G03920.2 26.984 378 196 16 12 335 19 370 9.17e-26 107
MsaG010775 AT1G03920.1 26.984 378 196 16 12 335 132 483 1.24e-25 108
MsaG010775 AT1G03920.3 26.984 378 196 16 12 335 132 483 1.24e-25 108
MsaG010775 AT5G04510.3 33.714 175 83 4 88 261 145 287 2.50e-24 101
MsaG010775 AT2G20470.3 29.555 247 146 8 88 321 225 456 1.76e-23 101
MsaG010775 AT2G20470.2 29.555 247 146 8 88 321 225 456 2.29e-23 101
MsaG010775 AT2G20470.1 29.555 247 146 8 88 321 225 456 2.29e-23 101
MsaG010775 AT2G45490.1 26.596 282 125 6 23 269 28 262 1.59e-21 93.6
MsaG010775 AT2G45490.2 24.188 277 131 5 2 246 7 236 1.41e-18 84.3
MsaG010775 AT2G25880.1 27.919 197 94 4 77 270 115 266 1.54e-17 82.0
MsaG010775 AT2G25880.4 24.912 285 132 7 21 270 42 279 1.80e-17 82.0
MsaG010775 AT4G32830.1 25.704 284 129 7 21 269 35 271 3.55e-17 81.3
MsaG010775 AT2G25880.3 24.912 285 132 7 21 270 90 327 4.12e-17 81.6
MsaG010775 AT3G04530.1 28.495 186 83 3 90 269 117 258 4.16e-17 80.9
MsaG010775 AT1G08650.1 28.495 186 84 3 90 269 120 262 6.27e-17 80.5
MsaG010775 AT1G08650.2 28.495 186 84 3 90 269 120 262 6.52e-17 80.1
MsaG010775 AT3G50530.2 28.723 188 111 6 91 269 257 430 7.00e-14 73.2
MsaG010775 AT2G25880.2 33.333 99 63 1 175 270 136 234 1.34e-12 67.4

Find 80 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGGGAAAACACCGTTTA+AGG 0.214990 2:+77656800 MsaT010775.1:CDS
CCGTCGCCGCGGATTACTTC+CGG 0.327605 2:-77656723 None:intergenic
GTTTGAGGTTGTTGAGGTTA+AGG 0.334202 2:-77656076 None:intergenic
CTCCCAACGGGCTCGACGTT+CGG 0.347912 2:-77656214 None:intergenic
AACGTTCTTATTCAACAATC+TGG 0.349756 2:+77656480 MsaT010775.1:CDS
CGTCGCCGCGGATTACTTCC+GGG 0.352639 2:-77656722 None:intergenic
TTCAAGAAGCTTGAATTTGT+TGG 0.364298 2:+77656858 MsaT010775.1:CDS
TGGAGGAGCTAATGAAATTA+AGG 0.369595 2:+77656953 MsaT010775.1:CDS
TTAAACTACGAGATGTTGTA+TGG 0.388096 2:+77656783 MsaT010775.1:CDS
AGGTTAAGGTCTTGTGTACT+AGG 0.388335 2:-77656062 None:intergenic
TTCTTATTCTTCCCCTTAAA+CGG 0.388670 2:-77656813 None:intergenic
TATTTGACGGCGGAGGAATT+CGG 0.390287 2:+77657059 MsaT010775.1:CDS
TATGGGAAAACACCGTTTAA+GGG 0.398885 2:+77656801 MsaT010775.1:CDS
CGCCGAACGTCGAGCCCGTT+GGG 0.404219 2:+77656212 MsaT010775.1:CDS
TGCCGTCGTCGTCGCCGTTA+CGG 0.416328 2:+77657120 MsaT010775.1:CDS
TGGAAGGAAAACAGCGTTAA+CGG 0.421220 2:+77656878 MsaT010775.1:CDS
CTCAAACCACTCAAAATATT+AGG 0.425265 2:+77656092 MsaT010775.1:CDS
AAGGATCCATTGAAGAGATT+AGG 0.425634 2:+77656924 MsaT010775.1:CDS
TCATCTCTCGACGGAATAAA+CGG 0.437394 2:-77657032 None:intergenic
GTCACCGTCGTCTGAGTTTG+AGG 0.438899 2:+77657142 MsaT010775.1:CDS
ACTCAATCGGCGAATTAGTC+CGG 0.447258 2:+77656626 MsaT010775.1:CDS
GAAAAGTCTAACTCGTTTGT+TGG 0.462299 2:+77656681 MsaT010775.1:CDS
ACGTAAACTTTCACACAAAA+CGG 0.466415 2:+77656533 MsaT010775.1:CDS
AGAAGACACGGTCCGTTTGT+TGG 0.477023 2:-77656362 None:intergenic
CTCAATCCACGACGACTCAC+CGG 0.481389 2:-77656645 None:intergenic
ATATTAGGCAAAGGAGCAAT+GGG 0.488514 2:+77656107 MsaT010775.1:CDS
ACGTAACCTAATCTCTTCAA+TGG 0.502638 2:-77656930 None:intergenic
GGTAAAATGGGAAATGTTGA+CGG 0.504814 2:+77656995 MsaT010775.1:CDS
GATGGAGAATTCCACTCAAT+CGG 0.506985 2:+77656613 MsaT010775.1:CDS
AATATTAGGCAAAGGAGCAA+TGG 0.515425 2:+77656106 MsaT010775.1:CDS
GAATCTCTGCTATGTAGAAA+CGG 0.516064 2:-77656398 None:intergenic
CGACGTTCGGCGTCGTGTGG+AGG 0.516361 2:-77656201 None:intergenic
TGCGCTCCGTTACCAACAAA+CGG 0.524239 2:+77656350 MsaT010775.1:CDS
AAATGTTGACGGAGGTTGTA+CGG 0.525214 2:+77657006 MsaT010775.1:CDS
AAGAGATTAGGTTACGTTGG+AGG 0.527362 2:+77656936 MsaT010775.1:CDS
GGACTAATTCGCCGATTGAG+TGG 0.528324 2:-77656624 None:intergenic
TAAGACGTCGATCTCCCAAC+GGG 0.538002 2:-77656226 None:intergenic
CACAGCAGAGTACGTCGCCC+CGG 0.544316 2:+77656704 MsaT010775.1:CDS
GATCGAACGGTTGTTAGAGA+AGG 0.544362 2:+77656905 MsaT010775.1:CDS
CACGGTCCGTTTGTTGGTAA+CGG 0.546711 2:-77656356 None:intergenic
AGAAGCTTGAATTTGTTGGA+AGG 0.553916 2:+77656862 MsaT010775.1:CDS
TTGAAGAGATTAGGTTACGT+TGG 0.554323 2:+77656933 MsaT010775.1:CDS
GTCAACTACTTTGAGTGCCA+TGG 0.555726 2:-77656174 None:intergenic
GCTCGACGTTCGGCGTCGTG+TGG 0.560595 2:-77656204 None:intergenic
GTGGATTCTGCTATCTTCGA+CGG 0.561764 2:-77656568 None:intergenic
GAGAGATGACGGTTATTTGA+CGG 0.561885 2:+77657046 MsaT010775.1:CDS
TTTATTCCGTCGAGAGATGA+CGG 0.563993 2:+77657035 MsaT010775.1:CDS
GGCGGAGGAATTCGGTGGAG+TGG 0.569972 2:+77657067 MsaT010775.1:CDS
TAAACTACGAGATGTTGTAT+GGG 0.570489 2:+77656784 MsaT010775.1:CDS
ATTAGTCCGGTGAGTCGTCG+TGG 0.574660 2:+77656639 MsaT010775.1:CDS
ACGCCGAACGTCGAGCCCGT+TGG 0.575774 2:+77656211 MsaT010775.1:CDS
TGAGTGGTTTGAGGTTGTTG+AGG 0.578898 2:-77656082 None:intergenic
TGACGGTTATTTGACGGCGG+AGG 0.580618 2:+77657052 MsaT010775.1:CDS
CCGGAAGTAATCCGCGGCGA+CGG 0.589107 2:+77656723 MsaT010775.1:CDS
GTCGCCGCGGATTACTTCCG+GGG 0.591913 2:-77656721 None:intergenic
CCACTCAAAATATTAGGCAA+AGG 0.592566 2:+77656098 MsaT010775.1:CDS
ATGGGAAAACACCGTTTAAG+GGG 0.596069 2:+77656802 MsaT010775.1:CDS
CTTGAACATCTTCATACCAT+GGG 0.597222 2:+77656429 MsaT010775.1:CDS
GACCGTAACGGCGACGACGA+CGG 0.597227 2:-77657122 None:intergenic
TCTTGAACATCTTCATACCA+TGG 0.599326 2:+77656428 MsaT010775.1:CDS
TTGACGGCGGAGGAATTCGG+TGG 0.604647 2:+77657062 MsaT010775.1:CDS
CGAAATCAGTTAACGTGACG+TGG 0.610579 2:-77656503 None:intergenic
ACGAATCTCAACGTAAAACT+CGG 0.616793 2:+77656589 MsaT010775.1:CDS
TCTTGTGTACTAGGTGATGT+TGG 0.617524 2:-77656053 None:intergenic
CTCAACGTAAAACTCGGCGA+TGG 0.629173 2:+77656595 MsaT010775.1:CDS
CGTTAACGGATTTGATCGAA+CGG 0.633392 2:+77656892 MsaT010775.1:CDS
CGAATTCATGTCCGTCGCCG+CGG 0.635238 2:-77656734 None:intergenic
TCAGACGACGGTGACCGTAA+CGG 0.637892 2:-77657134 None:intergenic
TTGCTGTTGTTGAGAAGACA+CGG 0.638083 2:-77656374 None:intergenic
CTATCCTCAAACTCAGACGA+CGG 0.647272 2:-77657146 None:intergenic
ATAAGACGTCGATCTCCCAA+CGG 0.650869 2:-77656227 None:intergenic
GTCGCCCCGGAAGTAATCCG+CGG 0.664172 2:+77656717 MsaT010775.1:CDS
CGTGGATTGAGTTTCTCCGA+CGG 0.669810 2:+77656657 MsaT010775.1:CDS
AAATAACCGTCATCTCTCGA+CGG 0.670876 2:-77657041 None:intergenic
GTCACGATAAGCTATGCCCA+TGG 0.680568 2:-77656445 None:intergenic
AACTACTTTGAGTGCCATGG+TGG 0.680601 2:-77656171 None:intergenic
AAAATGGGAAATGTTGACGG+AGG 0.693491 2:+77656998 MsaT010775.1:CDS
CAACAACGTTAACACCACCA+TGG 0.701516 2:+77656157 MsaT010775.1:CDS
AGATGACGGTTATTTGACGG+CGG 0.716338 2:+77657049 MsaT010775.1:CDS
TCTCTCGACGGAATAAACGG+TGG 0.757144 2:-77657029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr2 gene 77656044 77657190 77656044 ID=MsaG010775
Chr2 mRNA 77656044 77657190 77656044 ID=MsaT010775.1;Parent=MsaG010775
Chr2 exon 77656044 77656242 77656044 ID=MsaT010775.1.exon1;Parent=MsaT010775.1
Chr2 CDS 77656044 77656242 77656044 ID=cds.MsaT010775.1;Parent=MsaT010775.1
Chr2 exon 77656337 77657190 77656337 ID=MsaT010775.1.exon2;Parent=MsaT010775.1
Chr2 CDS 77656337 77657190 77656337 ID=cds.MsaT010775.1;Parent=MsaT010775.1
Gene Sequence

>MsaT010775.1

ATGGATTCACCAACATCACCTAGTACACAAGACCTTAACCTCAACAACCTCAAACCACTCAAAATATTAGGCAAAGGAGCAATGGGAACCGTTTTCCTCATCCAACAAAACAACAACAACGTTAACACCACCATGGCACTCAAAGTAGTTGACAAATCCTCCACACGACGCCGAACGTCGAGCCCGTTGGGAGATCGACGAGGTGATCTGAATGCGCTCCGTTACCAACAAACGGACCGTGTCTTCTCAACAACAGCAATCCGTTTCTACATAGCAGAGATTCTCTGCGCTCTTGAACATCTTCATACCATGGGCATAGCTTATCGTGACCTTAAACCAGAAAACGTTCTTATTCAACAATCTGGCCACGTCACGTTAACTGATTTCGATCTCTCACGTAAACTTTCACACAAAACGGTTAGAACTTTAACCGTCGAAGATAGCAGAATCCACGAATCTCAACGTAAAACTCGGCGATGGAGAATTCCACTCAATCGGCGAATTAGTCCGGTGAGTCGTCGTGGATTGAGTTTCTCCGACGGTGAAAAGTCTAACTCGTTTGTTGGCACAGCAGAGTACGTCGCCCCGGAAGTAATCCGCGGCGACGGACATGAATTCGCAGTTGATTTTTGGGCTCTTGGAATTTTAAACTACGAGATGTTGTATGGGAAAACACCGTTTAAGGGGAAGAATAAGAAAGAAACTTTTTCAAACGTGCTTTTCAAGAAGCTTGAATTTGTTGGAAGGAAAACAGCGTTAACGGATTTGATCGAACGGTTGTTAGAGAAGGATCCATTGAAGAGATTAGGTTACGTTGGAGGAGCTAATGAAATTAAGGAGCATGAGTTTTTTAGAGGGGTAAAATGGGAAATGTTGACGGAGGTTGTACGGCCACCGTTTATTCCGTCGAGAGATGACGGTTATTTGACGGCGGAGGAATTCGGTGGAGTGGATATAAGTGATTATTTCGATAAGCTGAAATTGCCGTCGTCGTCGCCGTTACGGTCACCGTCGTCTGAGTTTGAGGATAGCGTTTCATTTGATGAGTTCTGA
Protein sequence

>MsaT010775.1

MDSPTSPSTQDLNLNNLKPLKILGKGAMGTVFLIQQNNNNVNTTMALKVVDKSSTRRRTSSPLGDRRGDLNALRYQQTDRVFSTTAIRFYIAEILCALEHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRKLSHKTVRTLTVEDSRIHESQRKTRRWRIPLNRRISPVSRRGLSFSDGEKSNSFVGTAEYVAPEVIRGDGHEFAVDFWALGILNYEMLYGKTPFKGKNKKETFSNVLFKKLEFVGRKTALTDLIERLLEKDPLKRLGYVGGANEIKEHEFFRGVKWEMLTEVVRPPFIPSRDDGYLTAEEFGGVDISDYFDKLKLPSSSPLRSPSSEFEDSVSFDEF*