Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010889 | XP_003597597.2 | 94.883 | 469 | 18 | 4 | 20 | 483 | 1 | 468 | 0.0 | 906 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010889 | sp|Q8H1F5|IDD7_ARATH | 49.895 | 477 | 169 | 15 | 16 | 470 | 17 | 445 | 7.42e-129 | 384 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010889 | tr|G7IUH6|G7IUH6_MEDTR | 94.883 | 469 | 18 | 4 | 20 | 483 | 1 | 468 | 0.0 | 906 |
Gene ID | Type | Classification |
---|---|---|
MsaG010889 | TF | C2H2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010889 | MtrunA17_Chr2g0330171 | 94.883 | 469 | 18 | 4 | 20 | 483 | 1 | 468 | 0.0 | 906 |
MsaG010889 | MtrunA17_Chr8g0342421 | 58.254 | 527 | 133 | 19 | 1 | 465 | 1 | 502 | 1.08e-175 | 503 |
MsaG010889 | MtrunA17_Chr1g0151351 | 48.687 | 495 | 183 | 15 | 12 | 480 | 3 | 452 | 1.72e-132 | 390 |
MsaG010889 | MtrunA17_Chr7g0263941 | 63.356 | 292 | 87 | 5 | 64 | 346 | 34 | 314 | 6.56e-122 | 362 |
MsaG010889 | MtrunA17_Chr1g0191991 | 59.744 | 313 | 73 | 5 | 60 | 338 | 59 | 352 | 4.21e-120 | 362 |
MsaG010889 | MtrunA17_Chr8g0373541 | 74.641 | 209 | 38 | 1 | 19 | 227 | 3 | 196 | 8.28e-117 | 353 |
MsaG010889 | MtrunA17_Chr1g0181381 | 54.971 | 342 | 89 | 9 | 64 | 341 | 38 | 378 | 1.48e-113 | 344 |
MsaG010889 | MtrunA17_Chr1g0185121 | 51.436 | 383 | 141 | 11 | 20 | 376 | 6 | 369 | 2.32e-113 | 342 |
MsaG010889 | MtrunA17_Chr1g0162971 | 54.462 | 325 | 95 | 4 | 64 | 335 | 41 | 365 | 1.54e-112 | 339 |
MsaG010889 | MtrunA17_Chr4g0040571 | 87.805 | 164 | 20 | 0 | 64 | 227 | 39 | 202 | 7.37e-112 | 340 |
MsaG010889 | MtrunA17_Chr1g0199101 | 87.805 | 164 | 20 | 0 | 61 | 224 | 44 | 207 | 4.71e-110 | 336 |
MsaG010889 | MtrunA17_Chr4g0029521 | 42.380 | 479 | 192 | 15 | 61 | 475 | 35 | 493 | 1.07e-108 | 331 |
MsaG010889 | MtrunA17_Chr1g0163001 | 76.562 | 192 | 42 | 1 | 38 | 226 | 14 | 205 | 2.89e-108 | 331 |
MsaG010889 | MtrunA17_Chr1g0210821 | 87.500 | 160 | 20 | 0 | 67 | 226 | 47 | 206 | 2.02e-107 | 330 |
MsaG010889 | MtrunA17_Chr7g0268961 | 57.491 | 287 | 100 | 3 | 74 | 338 | 32 | 318 | 4.56e-107 | 327 |
MsaG010889 | MtrunA17_Chr2g0326381 | 81.928 | 166 | 29 | 1 | 63 | 227 | 31 | 196 | 4.58e-102 | 311 |
MsaG010889 | MtrunA17_Chr3g0141431 | 78.750 | 160 | 33 | 1 | 62 | 220 | 20 | 179 | 1.80e-96 | 297 |
MsaG010889 | MtrunA17_Chr2g0324991 | 89.313 | 131 | 14 | 0 | 75 | 205 | 3 | 133 | 1.90e-87 | 264 |
MsaG010889 | MtrunA17_Chr6g0479921 | 62.821 | 156 | 57 | 1 | 64 | 218 | 29 | 184 | 2.81e-72 | 236 |
MsaG010889 | MtrunA17_Chr8g0375521 | 62.821 | 156 | 56 | 2 | 64 | 217 | 27 | 182 | 2.99e-71 | 232 |
MsaG010889 | MtrunA17_Chr2g0320341 | 32.955 | 176 | 97 | 4 | 73 | 227 | 224 | 399 | 2.51e-23 | 101 |
MsaG010889 | MtrunA17_Chr1g0200421 | 35.099 | 151 | 86 | 3 | 78 | 216 | 236 | 386 | 4.47e-23 | 102 |
MsaG010889 | MtrunA17_Chr3g0123941 | 35.762 | 151 | 89 | 4 | 74 | 216 | 118 | 268 | 2.28e-22 | 97.8 |
MsaG010889 | MtrunA17_Chr5g0422571 | 36.709 | 158 | 86 | 7 | 76 | 221 | 96 | 251 | 9.24e-21 | 92.4 |
MsaG010889 | MtrunA17_Chr8g0382121 | 34.459 | 148 | 86 | 5 | 77 | 213 | 109 | 256 | 1.10e-19 | 89.7 |
MsaG010889 | MtrunA17_Chr7g0258011 | 32.716 | 162 | 89 | 6 | 80 | 223 | 176 | 335 | 1.22e-19 | 90.1 |
MsaG010889 | MtrunA17_Chr8g0352011 | 34.247 | 146 | 86 | 4 | 80 | 216 | 166 | 310 | 2.12e-19 | 89.4 |
MsaG010889 | MtrunA17_Chr1g0198651 | 35.172 | 145 | 79 | 6 | 85 | 216 | 107 | 249 | 2.24e-18 | 85.5 |
MsaG010889 | MtrunA17_Chr1g0173841 | 33.333 | 147 | 86 | 5 | 80 | 216 | 215 | 359 | 2.36e-18 | 87.0 |
MsaG010889 | MtrunA17_Chr4g0053341 | 32.911 | 158 | 95 | 5 | 68 | 216 | 63 | 218 | 8.73e-18 | 82.4 |
MsaG010889 | MtrunA17_Chr2g0328921 | 32.877 | 146 | 88 | 4 | 80 | 216 | 138 | 282 | 1.14e-17 | 84.0 |
MsaG010889 | MtrunA17_Chr4g0026521 | 33.333 | 147 | 86 | 5 | 80 | 216 | 118 | 262 | 1.52e-17 | 83.2 |
MsaG010889 | MtrunA17_Chr2g0321291 | 34.694 | 147 | 84 | 6 | 80 | 216 | 133 | 277 | 3.07e-17 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG010889 | AT1G55110.3 | 49.895 | 477 | 169 | 15 | 16 | 470 | 17 | 445 | 7.55e-130 | 384 |
MsaG010889 | AT1G55110.1 | 49.895 | 477 | 169 | 15 | 16 | 470 | 17 | 445 | 7.55e-130 | 384 |
MsaG010889 | AT1G55110.2 | 49.895 | 477 | 169 | 15 | 16 | 470 | 17 | 445 | 7.55e-130 | 384 |
MsaG010889 | AT3G13810.5 | 75.785 | 223 | 41 | 3 | 17 | 229 | 12 | 231 | 2.22e-117 | 354 |
MsaG010889 | AT3G13810.5 | 37.356 | 174 | 85 | 8 | 315 | 482 | 353 | 508 | 2.56e-18 | 88.2 |
MsaG010889 | AT3G13810.4 | 75.785 | 223 | 41 | 3 | 17 | 229 | 17 | 236 | 2.58e-117 | 354 |
MsaG010889 | AT3G13810.4 | 37.356 | 174 | 85 | 8 | 315 | 482 | 358 | 513 | 3.64e-18 | 87.4 |
MsaG010889 | AT3G13810.1 | 75.785 | 223 | 41 | 3 | 17 | 229 | 17 | 236 | 2.58e-117 | 354 |
MsaG010889 | AT3G13810.1 | 37.356 | 174 | 85 | 8 | 315 | 482 | 358 | 513 | 3.64e-18 | 87.4 |
MsaG010889 | AT3G13810.6 | 75.909 | 220 | 40 | 3 | 20 | 229 | 1 | 217 | 1.04e-115 | 350 |
MsaG010889 | AT3G13810.6 | 37.356 | 174 | 85 | 8 | 315 | 482 | 339 | 494 | 2.41e-18 | 88.2 |
MsaG010889 | AT3G50700.1 | 82.759 | 174 | 30 | 0 | 63 | 236 | 33 | 206 | 4.34e-112 | 339 |
MsaG010889 | AT5G66730.1 | 72.596 | 208 | 40 | 1 | 19 | 226 | 4 | 194 | 5.38e-112 | 340 |
MsaG010889 | AT1G03840.1 | 87.805 | 164 | 20 | 0 | 63 | 226 | 40 | 203 | 1.24e-111 | 340 |
MsaG010889 | AT5G44160.1 | 81.667 | 180 | 28 | 1 | 52 | 226 | 20 | 199 | 3.48e-109 | 332 |
MsaG010889 | AT1G14580.1 | 67.290 | 214 | 65 | 1 | 13 | 226 | 7 | 215 | 2.85e-108 | 330 |
MsaG010889 | AT1G14580.2 | 67.290 | 214 | 65 | 1 | 13 | 226 | 7 | 215 | 2.85e-108 | 330 |
MsaG010889 | AT4G02670.1 | 70.222 | 225 | 56 | 4 | 29 | 243 | 17 | 240 | 3.93e-108 | 327 |
MsaG010889 | AT4G02670.2 | 70.222 | 225 | 56 | 4 | 29 | 243 | 19 | 242 | 4.42e-108 | 327 |
MsaG010889 | AT2G02080.1 | 82.424 | 165 | 29 | 0 | 62 | 226 | 52 | 216 | 6.51e-108 | 330 |
MsaG010889 | AT2G02080.4 | 82.424 | 165 | 29 | 0 | 62 | 226 | 52 | 216 | 6.51e-108 | 330 |
MsaG010889 | AT2G02080.5 | 82.424 | 165 | 29 | 0 | 62 | 226 | 52 | 216 | 6.51e-108 | 330 |
MsaG010889 | AT2G02080.3 | 82.424 | 165 | 29 | 0 | 62 | 226 | 52 | 216 | 6.51e-108 | 330 |
MsaG010889 | AT1G14580.3 | 67.290 | 214 | 65 | 1 | 13 | 226 | 21 | 229 | 6.62e-108 | 329 |
MsaG010889 | AT1G03840.2 | 86.585 | 164 | 20 | 1 | 63 | 226 | 40 | 201 | 1.05e-107 | 329 |
MsaG010889 | AT3G45260.2 | 81.921 | 177 | 29 | 2 | 63 | 236 | 38 | 214 | 1.83e-107 | 327 |
MsaG010889 | AT3G45260.1 | 81.921 | 177 | 29 | 2 | 63 | 236 | 38 | 214 | 1.83e-107 | 327 |
MsaG010889 | AT5G60470.2 | 75.789 | 190 | 43 | 3 | 50 | 237 | 31 | 219 | 4.37e-106 | 323 |
MsaG010889 | AT5G60470.3 | 75.789 | 190 | 43 | 3 | 50 | 237 | 27 | 215 | 4.85e-106 | 323 |
MsaG010889 | AT3G13810.2 | 69.432 | 229 | 51 | 3 | 17 | 229 | 12 | 237 | 6.85e-106 | 325 |
MsaG010889 | AT3G13810.2 | 37.356 | 174 | 85 | 8 | 315 | 482 | 359 | 514 | 4.17e-18 | 87.4 |
MsaG010889 | AT2G02070.2 | 84.049 | 163 | 26 | 0 | 64 | 226 | 52 | 214 | 1.49e-104 | 324 |
MsaG010889 | AT2G02070.1 | 84.049 | 163 | 26 | 0 | 64 | 226 | 52 | 214 | 1.49e-104 | 324 |
MsaG010889 | AT3G13810.3 | 69.469 | 226 | 50 | 3 | 20 | 229 | 1 | 223 | 3.27e-104 | 320 |
MsaG010889 | AT3G13810.3 | 37.356 | 174 | 85 | 8 | 315 | 482 | 345 | 500 | 3.98e-18 | 87.4 |
MsaG010889 | AT5G03150.1 | 83.636 | 165 | 26 | 1 | 63 | 226 | 52 | 216 | 3.97e-103 | 318 |
MsaG010889 | AT5G44160.2 | 86.275 | 153 | 21 | 0 | 74 | 226 | 8 | 160 | 2.18e-100 | 308 |
MsaG010889 | AT5G60470.1 | 78.788 | 165 | 33 | 2 | 75 | 237 | 46 | 210 | 1.04e-96 | 299 |
MsaG010889 | AT2G02080.6 | 82.734 | 139 | 24 | 0 | 88 | 226 | 1 | 139 | 5.76e-91 | 284 |
MsaG010889 | AT2G02080.2 | 82.734 | 139 | 24 | 0 | 88 | 226 | 1 | 139 | 5.76e-91 | 284 |
MsaG010889 | AT1G68130.1 | 63.462 | 156 | 55 | 2 | 64 | 217 | 41 | 196 | 2.36e-72 | 235 |
MsaG010889 | AT2G01940.1 | 63.291 | 158 | 56 | 2 | 64 | 219 | 44 | 201 | 1.07e-71 | 234 |
MsaG010889 | AT1G25250.3 | 58.960 | 173 | 60 | 3 | 64 | 233 | 33 | 197 | 3.07e-71 | 231 |
MsaG010889 | AT2G01940.3 | 62.264 | 159 | 57 | 3 | 64 | 219 | 44 | 202 | 3.68e-68 | 225 |
MsaG010889 | AT1G25250.1 | 60.123 | 163 | 54 | 3 | 74 | 233 | 20 | 174 | 6.20e-68 | 222 |
MsaG010889 | AT1G68130.2 | 63.636 | 110 | 38 | 2 | 110 | 217 | 1 | 110 | 1.29e-45 | 162 |
MsaG010889 | AT2G01940.2 | 62.500 | 112 | 40 | 2 | 110 | 219 | 1 | 112 | 3.57e-45 | 162 |
MsaG010889 | AT1G25250.2 | 57.480 | 127 | 43 | 3 | 110 | 233 | 1 | 119 | 7.39e-45 | 159 |
MsaG010889 | AT1G34370.3 | 30.841 | 214 | 125 | 6 | 59 | 254 | 3 | 211 | 1.21e-23 | 101 |
MsaG010889 | AT1G34370.2 | 30.415 | 217 | 128 | 6 | 56 | 254 | 210 | 421 | 2.17e-23 | 103 |
MsaG010889 | AT1G34370.1 | 30.415 | 217 | 128 | 6 | 56 | 254 | 210 | 421 | 2.17e-23 | 103 |
MsaG010889 | AT5G22890.1 | 32.026 | 153 | 90 | 3 | 78 | 216 | 202 | 354 | 1.96e-21 | 96.3 |
MsaG010889 | AT1G13290.1 | 34.161 | 161 | 91 | 7 | 76 | 224 | 85 | 242 | 4.14e-19 | 88.2 |
MsaG010889 | AT3G20880.1 | 33.562 | 146 | 87 | 4 | 80 | 216 | 243 | 387 | 1.83e-18 | 87.8 |
MsaG010889 | AT1G51220.1 | 32.192 | 146 | 89 | 4 | 80 | 216 | 165 | 309 | 5.56e-18 | 85.5 |
MsaG010889 | AT3G57670.1 | 32.653 | 147 | 87 | 5 | 80 | 216 | 204 | 348 | 8.08e-18 | 85.5 |
MsaG010889 | AT1G08290.1 | 36.765 | 136 | 73 | 6 | 92 | 216 | 179 | 312 | 5.90e-17 | 82.4 |
MsaG010889 | AT1G34790.1 | 32.450 | 151 | 90 | 5 | 76 | 216 | 128 | 276 | 3.27e-16 | 79.7 |
Find 100 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTTCTTCTGGATTTCA+TGG | 0.185525 | 2:+79009539 | MsaT010889.1:CDS |
TTCTCTTGTGCCACAGGTTT+TGG | 0.189840 | 2:-79008411 | None:intergenic |
AACAACTCTTTCTCTTCTTC+TGG | 0.209031 | 2:+79009530 | MsaT010889.1:CDS |
GGTATTTGTACTTCTTGTTC+TGG | 0.297642 | 2:-79009182 | None:intergenic |
GAAGCTAGTGCTAATTCTTC+TGG | 0.298581 | 2:+79007489 | MsaT010889.1:CDS |
GGAAGTGTAGGACCATTTCT+AGG | 0.313383 | 2:-79009290 | None:intergenic |
AGCCTTGGATATCTTGAGTT+TGG | 0.314047 | 2:-79009118 | None:intergenic |
TTTGTTGCCATCAGTGTCTT+TGG | 0.324056 | 2:-79008098 | None:intergenic |
GCACTTACAAGAGATTTCTT+AGG | 0.351186 | 2:+79009698 | MsaT010889.1:CDS |
AGAAAGAGTTGTTTATCATT+TGG | 0.355557 | 2:-79009520 | None:intergenic |
ACCTCTCCTCAAACTATTCA+AGG | 0.372455 | 2:+79009231 | MsaT010889.1:CDS |
GTAGGACCATTTCTAGGGTT+AGG | 0.377918 | 2:-79009284 | None:intergenic |
ATCCAACCTTGAATAGTTTG+AGG | 0.405976 | 2:-79009237 | None:intergenic |
ATCAAAGTTTCAAAATGTTA+AGG | 0.407806 | 2:+79009159 | MsaT010889.1:CDS |
TTGTGTAGGTTGTGGAATTA+CGG | 0.407829 | 2:-79009066 | None:intergenic |
AGTGATATCCTCACCATTGC+TGG | 0.409995 | 2:+79009740 | MsaT010889.1:CDS |
TCTAATTTGACTTCTGCATC+TGG | 0.412009 | 2:+79007465 | MsaT010889.1:CDS |
TAGGACCATTTCTAGGGTTA+GGG | 0.414611 | 2:-79009283 | None:intergenic |
TGGTGCACACAAGTTGGTTC+TGG | 0.417382 | 2:-79008257 | None:intergenic |
TATCCTCACCATTGCTGGTA+TGG | 0.421802 | 2:+79009745 | MsaT010889.1:CDS |
CATGACCCATCAAGAGCCTT+GGG | 0.426349 | 2:+79008278 | MsaT010889.1:CDS |
GTTGAGTGGGACCCACCAAC+AGG | 0.427753 | 2:+79009412 | MsaT010889.1:CDS |
GTTCTTTGCTTCAACTTCCA+TGG | 0.431659 | 2:-79008200 | None:intergenic |
TCTGTATTCTCTTGTGCCAC+AGG | 0.435175 | 2:-79008417 | None:intergenic |
AAGAAAAGAAGAAACCTTCC+TGG | 0.442018 | 2:+79007594 | MsaT010889.1:CDS |
ATTTGAGTTTATCATGTTGT+TGG | 0.445102 | 2:-79009462 | None:intergenic |
GTTTGAGGAGAGGTCAATGT+TGG | 0.446017 | 2:-79009222 | None:intergenic |
CTTTCTTCAATGTCAAGCCT+TGG | 0.446505 | 2:-79009133 | None:intergenic |
AAGCTATAACTTCAGCTTGT+GGG | 0.447498 | 2:-79008070 | None:intergenic |
GAAAACCCTAACCCTAGAAA+TGG | 0.454115 | 2:+79009278 | MsaT010889.1:CDS |
AGTGCTTCTTGATACCAGTT+AGG | 0.454887 | 2:-79008304 | None:intergenic |
GAAAATGAACCTGGATTGCC+AGG | 0.461039 | 2:-79007612 | None:intergenic |
CAGAGCCTTCTGTGATGCAT+TGG | 0.469401 | 2:+79009025 | MsaT010889.1:CDS |
TGCATTGTTTCCTCCGGCAC+CGG | 0.471541 | 2:-79009678 | None:intergenic |
AGAAACCTTCCTGGCAATCC+AGG | 0.472577 | 2:+79007603 | MsaT010889.1:CDS |
CCAAGGCTCTTGATGGGTCA+TGG | 0.475409 | 2:-79008277 | None:intergenic |
TGTAAGTGCATTGTTTCCTC+CGG | 0.475628 | 2:-79009684 | None:intergenic |
CCATGACCCATCAAGAGCCT+TGG | 0.490603 | 2:+79008277 | MsaT010889.1:CDS |
ACCGGCACCGTCATCATCAT+TGG | 0.490777 | 2:-79009660 | None:intergenic |
AACAACATGATAAACTCAAA+TGG | 0.493838 | 2:+79009464 | MsaT010889.1:CDS |
AATCTTCAACTTCATAAAAG+AGG | 0.500458 | 2:+79008167 | MsaT010889.1:CDS |
ATCCTCACCATTGCTGGTAT+GGG | 0.502220 | 2:+79009746 | MsaT010889.1:CDS |
AGTTGATGCAAAATTCTCTC+AGG | 0.503692 | 2:+79007524 | MsaT010889.1:CDS |
GATGATGACGGTGCCGGTGC+CGG | 0.516820 | 2:+79009665 | MsaT010889.1:CDS |
GTTACAGAAAGCAGCTCAGA+TGG | 0.517581 | 2:+79009364 | MsaT010889.1:CDS |
ATGAACCTGGATTGCCAGGA+AGG | 0.520133 | 2:-79007608 | None:intergenic |
ATAGTTATACCTTGAGAAGA+GGG | 0.521705 | 2:-79008453 | None:intergenic |
ATATGTGAGATCTGTAACAA+AGG | 0.526520 | 2:+79008128 | MsaT010889.1:CDS |
AAGAAGTACAAATACCCTCT+TGG | 0.528888 | 2:+79009189 | MsaT010889.1:CDS |
ACAACAATCATTAGTTGTTG+AGG | 0.530940 | 2:+79007434 | MsaT010889.1:CDS |
AGTATGCAGTTCAATCAGAC+TGG | 0.532991 | 2:+79008378 | MsaT010889.1:CDS |
TTTGGAGATTGTTCATGTTG+TGG | 0.533091 | 2:-79009100 | None:intergenic |
AAAGAACAAGCAATGAGATA+AGG | 0.533182 | 2:+79008216 | MsaT010889.1:CDS |
CTCCTCAAACTATTCAAGGT+TGG | 0.534048 | 2:+79009235 | MsaT010889.1:CDS |
TGAGGTGAAGCTGCAGATGC+TGG | 0.537360 | 2:-79009323 | None:intergenic |
TGAGTTTATCATGTTGTTGG+TGG | 0.541113 | 2:-79009459 | None:intergenic |
GCAGATGCTGGTTGGTAGGA+TGG | 0.542786 | 2:-79009311 | None:intergenic |
TTGGTGGGTCCCACTCAACA+TGG | 0.546559 | 2:-79009408 | None:intergenic |
CCAAACTAATTACCTTCCCA+TGG | 0.548476 | 2:-79009821 | None:intergenic |
CAACATGGACTGAGATGAGC+TGG | 0.548999 | 2:-79009393 | None:intergenic |
TATCATTTGGTCTTCACATG+AGG | 0.559455 | 2:-79009507 | None:intergenic |
TATAGTTATACCTTGAGAAG+AGG | 0.562344 | 2:-79008454 | None:intergenic |
GAACATAATATCAATCATGA+TGG | 0.565329 | 2:+79009611 | MsaT010889.1:CDS |
GAAAGCACGGTGAGAAGAAG+TGG | 0.566601 | 2:+79008333 | MsaT010889.1:CDS |
GAAGTGTAGGACCATTTCTA+GGG | 0.573649 | 2:-79009289 | None:intergenic |
ACCTTGAATAGTTTGAGGAG+AGG | 0.575888 | 2:-79009232 | None:intergenic |
TCATCTCAGTCCATGTTGAG+TGG | 0.578988 | 2:+79009398 | MsaT010889.1:CDS |
CTCAGCCAATGCATCACAGA+AGG | 0.582209 | 2:-79009030 | None:intergenic |
TAGACACGTGACCCTGTTGG+TGG | 0.583962 | 2:-79009424 | None:intergenic |
CTTCTGTGATGCATTGGCTG+AGG | 0.585782 | 2:+79009031 | MsaT010889.1:CDS |
GGCACCGTCATCATCATTGG+TGG | 0.585980 | 2:-79009657 | None:intergenic |
AAAGAGGACACAATTTGCCA+TGG | 0.587343 | 2:+79008183 | MsaT010889.1:CDS |
CATCTCAGTCCATGTTGAGT+GGG | 0.587878 | 2:+79009399 | MsaT010889.1:CDS |
CTCCAAACTCAAGATATCCA+AGG | 0.596098 | 2:+79009116 | MsaT010889.1:CDS |
GCAACTTCCCATACCAGCAA+TGG | 0.602937 | 2:-79009753 | None:intergenic |
AAAGCTATAACTTCAGCTTG+TGG | 0.603171 | 2:-79008071 | None:intergenic |
AAGCACTTCTGCAGAAAGCA+CGG | 0.603251 | 2:+79008320 | MsaT010889.1:CDS |
TTGGATTGACATAGCCAAGA+GGG | 0.612593 | 2:-79009203 | None:intergenic |
GATGACGGTGCCGGTGCCGG+AGG | 0.615538 | 2:+79009668 | MsaT010889.1:CDS |
TTCCCATACCAGCAATGGTG+AGG | 0.621943 | 2:-79009748 | None:intergenic |
CAATAGACACGTGACCCTGT+TGG | 0.624582 | 2:-79009427 | None:intergenic |
ACCAATGATGATGACGGTGC+CGG | 0.625084 | 2:+79009659 | MsaT010889.1:CDS |
ACTGTGGAACCCTCTTCTCA+AGG | 0.626939 | 2:+79008444 | MsaT010889.1:CDS |
AGCTGCAGATGCTGGTTGGT+AGG | 0.631564 | 2:-79009315 | None:intergenic |
TCAACCACCAATGATGATGA+CGG | 0.633146 | 2:+79009653 | MsaT010889.1:CDS |
GGTTGGTAGGATGGAAGTGT+AGG | 0.641310 | 2:-79009302 | None:intergenic |
TTACAGAAAGCAGCTCAGAT+GGG | 0.645481 | 2:+79009365 | MsaT010889.1:CDS |
GTGAAGCTGCAGATGCTGGT+TGG | 0.647374 | 2:-79009319 | None:intergenic |
AGACACGTGACCCTGTTGGT+GGG | 0.651658 | 2:-79009423 | None:intergenic |
TGACCCATCAAGAGCCTTGG+GGG | 0.652313 | 2:+79008280 | MsaT010889.1:CDS |
TTTGTCACCAAAGACACTGA+TGG | 0.656547 | 2:+79008091 | MsaT010889.1:CDS |
AGGATATCACTATCAGAGAG+AGG | 0.661126 | 2:-79009728 | None:intergenic |
GGGTCATGGTGCACACAAGT+TGG | 0.674016 | 2:-79008263 | None:intergenic |
TTGAGTGGGACCCACCAACA+GGG | 0.675919 | 2:+79009413 | MsaT010889.1:CDS |
AAAGCTCACTCCAAAACCTG+TGG | 0.698299 | 2:+79008401 | MsaT010889.1:CDS |
AGAGAATACAGATGTGACTG+TGG | 0.700052 | 2:+79008428 | MsaT010889.1:CDS |
ATGACCCATCAAGAGCCTTG+GGG | 0.705499 | 2:+79008279 | MsaT010889.1:CDS |
AGCTGCTTTCTGTAACAATG+CGG | 0.719133 | 2:-79009357 | None:intergenic |
GTTGGATTGACATAGCCAAG+AGG | 0.725600 | 2:-79009204 | None:intergenic |
AATGCGGTAGCTGACATGTG+AGG | 0.762692 | 2:-79009341 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 79007405 | 79009838 | 79007405 | ID=MsaG010889 |
Chr2 | mRNA | 79007405 | 79009838 | 79007405 | ID=MsaT010889.1;Parent=MsaG010889 |
Chr2 | exon | 79007405 | 79007624 | 79007405 | ID=MsaT010889.1.exon1;Parent=MsaT010889.1 |
Chr2 | CDS | 79007405 | 79007624 | 79007405 | ID=cds.MsaT010889.1;Parent=MsaT010889.1 |
Chr2 | exon | 79008069 | 79008465 | 79008069 | ID=MsaT010889.1.exon2;Parent=MsaT010889.1 |
Chr2 | CDS | 79008069 | 79008465 | 79008069 | ID=cds.MsaT010889.1;Parent=MsaT010889.1 |
Chr2 | exon | 79009004 | 79009838 | 79009004 | ID=MsaT010889.1.exon3;Parent=MsaT010889.1 |
Chr2 | CDS | 79009004 | 79009838 | 79009004 | ID=cds.MsaT010889.1;Parent=MsaT010889.1 |
Gene Sequence |
Protein sequence |