AlfalfaGEDB | MsaG011183

M. sativa ssp. caerulea / MsaG011183

KEGG: -
GO: GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG011183	KEH20194.1	79.775	267	37	2	1	250	1	267	9.06e-145	416

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG011183	sp\|Q9T072\|BH025_ARATH	36.715	207	126	3	54	255	105	311	4.95e-35	130

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG011183	tr\|A0A072TRP6\|A0A072TRP6_MEDTR	79.775	267	37	2	1	250	1	267	4.33e-145	416

TFs/TRs:

Gene ID	Type	Classification
MsaG011183	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000004	MsaG011183	0.854496	2.285232e-61	1.450099e-58
MsaG000033	MsaG011183	0.826461	4.768630e-54	1.249185e-51
MsaG000096	MsaG011183	0.806390	1.427191e-49	2.235416e-47
MsaG000125	MsaG011183	0.848027	1.505500e-59	7.631712e-57
MsaG000170	MsaG011183	0.837170	1.115301e-56	3.987957e-54
MsaG000355	MsaG011183	0.827721	2.389903e-54	6.484594e-52
MsaG000431	MsaG011183	0.805332	2.375634e-49	3.629448e-47
MsaG000519	MsaG011183	0.866131	7.152434e-65	7.070406e-62
MsaG000532	MsaG011183	0.844757	1.162218e-58	5.283323e-56
MsaG000599	MsaG011183	0.811165	1.375166e-50	2.416182e-48
MsaG000717	MsaG011183	0.893066	1.978797e-74	6.863306e-71
MsaG000788	MsaG011183	0.855995	8.413342e-62	5.634621e-59
MsaG001134	MsaG011183	0.825454	8.249448e-54	2.101244e-51
MsaG001171	MsaG011183	0.800093	2.831140e-48	3.835846e-46
MsaG001363	MsaG011183	0.819492	1.974847e-52	4.285495e-50
MsaG001468	MsaG011183	0.855307	1.332337e-61	8.703823e-59
MsaG001542	MsaG011183	0.899633	3.751796e-77	1.878290e-73
MsaG001730	MsaG011183	0.825563	7.775856e-54	1.986610e-51
MsaG001939	MsaG011183	0.816913	7.522524e-52	1.526780e-49
MsaG002469	MsaG011183	0.858231	1.854616e-62	1.348933e-59
MsaG003402	MsaG011183	0.803152	6.721366e-49	9.762952e-47
MsaG003513	MsaG011183	0.829721	7.891514e-55	2.265673e-52
MsaG003861	MsaG011183	0.802799	7.946285e-49	1.144831e-46
MsaG004006	MsaG011183	0.869449	6.231423e-66	7.056416e-63
MsaG003926	MsaG011183	0.840640	1.425114e-57	5.676101e-55
MsaG004047	MsaG011183	0.837310	1.027848e-56	3.690729e-54
MsaG004107	MsaG011183	0.832509	1.641966e-55	5.109615e-53
MsaG004202	MsaG011183	0.815454	1.587546e-51	3.104373e-49
MsaG004364	MsaG011183	0.812107	8.601203e-51	1.546511e-48
MsaG004434	MsaG011183	0.862571	9.139299e-64	7.843448e-61
MsaG004382	MsaG011183	0.801884	1.223451e-48	1.726259e-46
MsaG004556	MsaG011183	0.802926	7.482378e-49	1.081173e-46
MsaG004621	MsaG011183	0.808100	6.221276e-50	1.014869e-47
MsaG004649	MsaG011183	0.801145	1.731428e-48	2.402266e-46
MsaG004717	MsaG011183	0.811639	1.086173e-50	1.930686e-48
MsaG004888	MsaG011183	0.824128	1.689087e-53	4.149068e-51
MsaG005154	MsaG011183	0.802251	1.029494e-48	1.464710e-46
MsaG005202	MsaG011183	0.815914	1.255766e-51	2.484340e-49
MsaG005283	MsaG011183	0.830067	6.504082e-55	1.885950e-52
MsaG005410	MsaG011183	0.808001	6.530305e-50	1.062742e-47
MsaG005402	MsaG011183	0.834346	5.746424e-56	1.887669e-53
MsaG005421	MsaG011183	0.833798	7.872511e-56	2.544102e-53
MsaG005423	MsaG011183	0.814196	3.008523e-51	5.699289e-49
MsaG005452	MsaG011183	0.810431	1.978765e-50	3.415012e-48
MsaG005541	MsaG011183	0.842267	5.337180e-58	2.238385e-55
MsaG005496	MsaG011183	0.826043	5.991115e-54	1.551264e-51
MsaG005526	MsaG011183	0.843372	2.721690e-58	1.182750e-55
MsaG005603	MsaG011183	0.810093	2.339211e-50	4.003744e-48
MsaG005792	MsaG011183	0.821382	7.310703e-53	1.667762e-50
MsaG005869	MsaG011183	0.827814	2.270249e-54	6.176228e-52
MsaG005897	MsaG011183	0.862947	7.004885e-64	6.100686e-61
MsaG005991	MsaG011183	0.822409	4.239907e-53	9.941128e-51
MsaG005917	MsaG011183	0.806513	1.344553e-49	2.112126e-47
MsaG005966	MsaG011183	0.891758	6.568656e-74	2.122771e-70
MsaG006074	MsaG011183	0.801810	1.266730e-48	1.784299e-46
MsaG006248	MsaG011183	0.839925	2.185743e-57	8.512867e-55
MsaG006255	MsaG011183	0.829355	9.673049e-55	2.748168e-52
MsaG006401	MsaG011183	0.808376	5.435915e-50	8.926478e-48
MsaG006456	MsaG011183	0.819371	2.103569e-52	4.550477e-50
MsaG006468	MsaG011183	0.873295	3.379281e-67	4.509506e-64
MsaG006500	MsaG011183	0.915851	8.987723e-85	1.256534e-80
MsaG006516	MsaG011183	0.826763	4.043184e-54	1.068015e-51
MsaG006601	MsaG011183	0.869087	8.156714e-66	9.098375e-63
MsaG006670	MsaG011183	0.848555	1.077812e-59	5.560765e-57
MsaG006777	MsaG011183	0.833226	1.091891e-55	3.470041e-53
MsaG006783	MsaG011183	0.842317	5.176146e-58	2.174479e-55
MsaG006842	MsaG011183	0.835246	3.419559e-56	1.153831e-53
MsaG007139	MsaG011183	0.812885	5.825063e-51	1.067844e-48
MsaG007195	MsaG011183	0.831360	3.147112e-55	9.470450e-53
MsaG007242	MsaG011183	0.817102	6.824989e-52	1.391988e-49
MsaG007322	MsaG011183	0.883819	6.957737e-71	1.504998e-67
MsaG007388	MsaG011183	0.861467	1.983662e-63	1.630924e-60
MsaG007442	MsaG011183	0.802415	9.526336e-49	1.360531e-46
MsaG007455	MsaG011183	0.827857	2.217803e-54	6.040584e-52
MsaG007614	MsaG011183	0.820407	1.222188e-52	2.717187e-50
MsaG007615	MsaG011183	0.838255	5.894284e-57	2.178798e-54
MsaG007879	MsaG011183	0.800737	2.095728e-48	2.881136e-46
MsaG007817	MsaG011183	0.825492	8.083287e-54	2.061097e-51
MsaG008017	MsaG011183	0.834309	5.870712e-56	1.926278e-53
MsaG008029	MsaG011183	0.828967	1.200349e-54	3.372712e-52
MsaG008056	MsaG011183	0.817912	4.491665e-52	9.353894e-50
MsaG008221	MsaG011183	0.814048	3.242720e-51	6.119996e-49
MsaG008222	MsaG011183	0.870369	3.130402e-66	3.684245e-63
MsaG008234	MsaG011183	0.849935	4.469803e-60	2.417129e-57
MsaG008465	MsaG011183	0.801232	1.662022e-48	2.310466e-46
MsaG008481	MsaG011183	0.814169	3.049645e-51	5.773264e-49
MsaG008561	MsaG011183	0.801432	1.513134e-48	2.113135e-46
MsaG008619	MsaG011183	0.861277	2.266133e-63	1.849698e-60
MsaG008996	MsaG011183	0.829878	7.225696e-55	2.083960e-52
MsaG010394	MsaG011183	0.806876	1.128287e-49	1.787541e-47
MsaG010599	MsaG011183	0.806647	1.260462e-49	1.986261e-47
MsaG010829	MsaG011183	0.813976	3.362473e-51	6.334790e-49
MsaG010942	MsaG011183	0.814680	2.353861e-51	4.513613e-49
MsaG011175	MsaG011183	0.833350	1.017409e-55	3.244876e-53
MsaG011090	MsaG011183	0.812012	9.017159e-51	1.617583e-48
MsaG011474	MsaG011183	0.831062	3.721840e-55	1.110392e-52
MsaG011479	MsaG011183	0.842011	6.231737e-58	2.592517e-55
MsaG011584	MsaG011183	0.911460	1.445419e-82	1.501670e-78
MsaG011600	MsaG011183	0.809812	2.686991e-50	4.567882e-48
MsaG011603	MsaG011183	0.803448	5.840012e-49	8.541049e-47
MsaG011699	MsaG011183	0.826407	4.912140e-54	1.284769e-51
MsaG011831	MsaG011183	0.815624	1.456192e-51	2.859788e-49
MsaG011890	MsaG011183	0.804392	3.726011e-49	5.569806e-47
MsaG012106	MsaG011183	0.805817	1.881064e-49	2.906629e-47
MsaG012423	MsaG011183	0.811592	1.111918e-50	1.974224e-48
MsaG012522	MsaG011183	0.870152	3.684361e-66	4.296881e-63
MsaG012549	MsaG011183	0.823070	2.978904e-53	7.110515e-51
MsaG042146	MsaG011183	0.824857	1.140438e-53	2.857560e-51
MsaG042454	MsaG011183	0.822021	5.210585e-53	1.209039e-50
MsaG043668	MsaG011183	0.815388	1.642237e-51	3.205918e-49
MsaG043669	MsaG011183	0.841371	9.176240e-58	3.740276e-55
MsaG043725	MsaG011183	0.813786	3.701459e-51	6.940438e-49
MsaG044104	MsaG011183	0.905626	8.313024e-80	5.949990e-76
MsaG044200	MsaG011183	0.800349	2.512213e-48	3.423571e-46
MsaG044376	MsaG011183	0.803573	5.504371e-49	8.073298e-47
MsaG044377	MsaG011183	0.808693	4.654675e-50	7.702655e-48
MsaG044379	MsaG011183	0.812613	6.677109e-51	1.215756e-48
MsaG044380	MsaG011183	0.816329	1.015181e-51	2.029757e-49
MsaG044661	MsaG011183	0.814280	2.882816e-51	5.472749e-49
MsaG044663	MsaG011183	0.806152	1.600997e-49	2.493492e-47
MsaG044876	MsaG011183	0.854986	1.650398e-61	1.065616e-58
MsaG044914	MsaG011183	0.836326	1.826981e-56	6.368199e-54
MsaG044928	MsaG011183	0.871262	1.595979e-66	1.951055e-63
MsaG044997	MsaG011183	0.821016	8.869290e-53	2.003937e-50
MsaG045581	MsaG011183	0.823116	2.907469e-53	6.948437e-51
MsaG045743	MsaG011183	0.813086	5.265003e-51	9.700394e-49
MsaG045819	MsaG011183	0.810112	2.317413e-50	3.968256e-48
MsaG045832	MsaG011183	0.888359	1.382079e-72	3.741889e-69
MsaG046041	MsaG011183	0.825474	8.160506e-54	2.079743e-51
MsaG046051	MsaG011183	0.803174	6.650862e-49	9.665575e-47
MsaG046205	MsaG011183	0.807450	8.538417e-50	1.371276e-47
MsaG046307	MsaG011183	0.808281	5.694355e-50	9.329756e-48
MsaG046311	MsaG011183	0.811383	1.233948e-50	2.179653e-48
MsaG046381	MsaG011183	0.864105	3.076384e-64	2.804641e-61
MsaG046522	MsaG011183	0.826825	3.909265e-54	1.034401e-51
MsaG046475	MsaG011183	0.814924	2.080153e-51	4.013399e-49
MsaG046501	MsaG011183	0.823406	2.489303e-53	5.995996e-51
MsaG046588	MsaG011183	0.805378	2.323915e-49	3.554236e-47
MsaG046589	MsaG011183	0.881992	3.219365e-70	6.378462e-67
MsaG046902	MsaG011183	0.835513	2.930762e-56	9.968969e-54
MsaG046939	MsaG011183	0.857308	3.473336e-62	2.440939e-59
MsaG046927	MsaG011183	0.863003	6.733043e-64	5.877216e-61
MsaG047138	MsaG011183	0.826945	3.660272e-54	9.717887e-52
MsaG001257	MsaG011183	0.800300	2.570060e-48	3.498427e-46
MsaG002654	MsaG011183	0.845704	6.461749e-59	3.030641e-56
MsaG001808	MsaG011183	0.821333	7.502485e-53	1.709306e-50
MsaG000634	MsaG011183	0.820186	1.372663e-52	3.034057e-50
MsaG001987	MsaG011183	0.825162	9.665767e-54	2.442268e-51
MsaG002035	MsaG011183	0.892329	3.896087e-74	1.298681e-70
MsaG001554	MsaG011183	0.811593	1.111675e-50	1.973812e-48
MsaG005167	MsaG011183	0.811220	1.338135e-50	2.354273e-48
MsaG007590	MsaG011183	0.827869	2.202834e-54	6.001826e-52
MsaG009510	MsaG011183	0.831376	3.117757e-55	9.386781e-53
MsaG011183	MsaG009512	0.810184	2.236018e-50	3.835583e-48
MsaG011183	MsaG012744	0.817263	6.279517e-52	1.286089e-49
MsaG011183	MsaG014403	0.802449	9.376499e-49	1.340150e-46
MsaG011183	MsaG014993	0.903527	7.397422e-79	4.665421e-75
MsaG011183	MsaG012091	0.820073	1.456791e-52	3.210269e-50
MsaG011183	MsaG012695	0.817311	6.127625e-52	1.256499e-49
MsaG011183	MsaG013496	0.848651	1.014078e-59	5.249217e-57
MsaG011183	MsaG019037	0.822704	3.621905e-53	8.560126e-51
MsaG011183	MsaG019458	0.826900	3.751455e-54	9.947407e-52
MsaG011183	MsaG018678	0.808849	4.312204e-50	7.162675e-48
MsaG011183	MsaG023179	0.804686	3.237925e-49	4.873137e-47
MsaG011183	MsaG023461	0.844390	1.456784e-58	6.542538e-56
MsaG011183	MsaG022828	0.847087	2.721824e-59	1.336752e-56
MsaG011183	MsaG024084	0.818556	3.215292e-52	6.808121e-50
MsaG011183	MsaG019847	0.808033	6.427415e-50	1.046832e-47
MsaG011183	MsaG029390	0.894375	5.864987e-75	2.183743e-71
MsaG011183	MsaG028903	0.820987	9.005882e-53	2.033217e-50
MsaG011183	MsaG027199	0.811842	9.815402e-51	1.753450e-48
MsaG011183	MsaG027263	0.828918	1.233130e-54	3.460088e-52
MsaG011183	MsaG033602	0.845702	6.468632e-59	3.033708e-56
MsaG011183	MsaG031280	0.831033	3.782570e-55	1.127576e-52
MsaG011183	MsaG031635	0.839013	3.761586e-57	1.423858e-54
MsaG011183	MsaG032886	0.827606	2.546496e-54	6.887217e-52
MsaG011183	MsaG034655	0.848003	1.528645e-59	7.742673e-57
MsaG011183	MsaG030863	0.800640	2.192943e-48	3.008270e-46
MsaG011183	MsaG033082	0.839124	3.523288e-57	1.338164e-54
MsaG011183	MsaG032931	0.816142	1.116947e-51	2.222690e-49
MsaG011183	MsaG032525	0.859232	9.342842e-63	7.055534e-60
MsaG011183	MsaG032092	0.822902	3.258558e-53	7.742648e-51
MsaG011183	MsaG032699	0.802938	7.438876e-49	1.075191e-46
MsaG011183	MsaG032481	0.834694	4.704789e-56	1.561614e-53
MsaG011183	MsaG031903	0.818902	2.686994e-52	5.741130e-50
MsaG011183	MsaG032474	0.807676	7.647687e-50	1.234911e-47
MsaG011183	MsaG037374	0.825129	9.841607e-54	2.484405e-51
MsaG011183	MsaG036672	0.846859	3.141519e-59	1.531093e-56
MsaG011183	MsaG037161	0.841580	8.090829e-58	3.319869e-55
MsaG011183	MsaG036233	0.842581	4.411346e-58	1.868988e-55
MsaG011183	MsaG035322	0.804014	4.462827e-49	6.613092e-47
MsaG011183	MsaG037827	0.838113	6.409094e-57	2.358773e-54
MsaG011183	MsaG035677	0.877974	8.554338e-69	1.406113e-65
MsaG011183	MsaG036205	0.838306	5.717481e-57	2.116869e-54
MsaG011183	MsaG037508	0.825125	9.863412e-54	2.489673e-51
MsaG011183	MsaG036415	0.849586	5.586373e-60	2.985668e-57
MsaG011183	MsaG044531	0.816353	1.002954e-51	2.006516e-49
MsaG011183	MsaG042585	0.805249	2.472201e-49	3.769709e-47
MsaG011183	MsaG043142	0.843553	2.436360e-58	1.064916e-55
MsaG011183	MsaG045256	0.830142	6.237134e-55	1.812412e-52
MsaG011183	MsaG046885	0.859985	5.561615e-63	4.321678e-60
MsaG013085	MsaG011183	0.815168	1.837339e-51	3.566771e-49
MsaG013271	MsaG011183	0.849592	5.567699e-60	2.976200e-57
MsaG013537	MsaG011183	0.854971	1.666339e-61	1.075351e-58
MsaG013658	MsaG011183	0.811652	1.079111e-50	1.918744e-48
MsaG013839	MsaG011183	0.803830	4.870022e-49	7.185622e-47
MsaG014855	MsaG011183	0.859633	7.091636e-63	5.437370e-60
MsaG015236	MsaG011183	0.849334	6.562962e-60	3.477263e-57
MsaG015371	MsaG011183	0.836932	1.282308e-56	4.551865e-54
MsaG016209	MsaG011183	0.845171	8.995815e-59	4.145014e-56
MsaG016215	MsaG011183	0.886267	8.587237e-72	2.093589e-68
MsaG016471	MsaG011183	0.815361	1.665342e-51	3.248791e-49
MsaG017009	MsaG011183	0.825806	6.816183e-54	1.753219e-51
MsaG017050	MsaG011183	0.864103	3.080092e-64	2.807755e-61
MsaG017068	MsaG011183	0.857990	2.185006e-62	1.574979e-59
MsaG017081	MsaG011183	0.877702	1.063588e-68	1.726684e-65
MsaG017095	MsaG011183	0.805404	2.295018e-49	3.512140e-47
MsaG017128	MsaG011183	0.817311	6.127625e-52	1.256499e-49
MsaG017299	MsaG011183	0.816473	9.426678e-52	1.891666e-49
MsaG017189	MsaG011183	0.915255	1.819941e-84	2.442568e-80
MsaG017194	MsaG011183	0.822275	4.552650e-53	1.063589e-50
MsaG017324	MsaG011183	0.868884	9.485338e-66	1.049145e-62
MsaG017404	MsaG011183	0.812759	6.204829e-51	1.133883e-48
MsaG017456	MsaG011183	0.843361	2.740013e-58	1.190309e-55
MsaG017530	MsaG011183	0.829718	7.902644e-55	2.268693e-52
MsaG017644	MsaG011183	0.814375	2.747402e-51	5.228146e-49
MsaG017702	MsaG011183	0.881799	3.776916e-70	7.417459e-67
MsaG017787	MsaG011183	0.855151	1.478924e-61	9.606100e-59
MsaG018085	MsaG011183	0.899901	2.877984e-77	1.463807e-73
MsaG018169	MsaG011183	0.900987	9.758554e-78	5.291285e-74
MsaG018223	MsaG011183	0.819700	1.770953e-52	3.864024e-50
MsaG018257	MsaG011183	0.807281	9.270149e-50	1.482785e-47
MsaG018498	MsaG011183	0.849385	6.354899e-60	3.372991e-57
MsaG018638	MsaG011183	0.810654	1.772539e-50	3.075605e-48
MsaG018662	MsaG011183	0.801872	1.230695e-48	1.735976e-46
MsaG018666	MsaG011183	0.843456	2.585995e-58	1.126776e-55
MsaG018701	MsaG011183	0.812002	9.063306e-51	1.625464e-48
MsaG018744	MsaG011183	0.803499	5.699964e-49	8.345982e-47
MsaG018754	MsaG011183	0.883264	1.110944e-70	2.339614e-67
MsaG019193	MsaG011183	0.804865	2.972267e-49	4.492069e-47
MsaG019223	MsaG011183	0.836189	1.978370e-56	6.867402e-54
MsaG019261	MsaG011183	0.821849	5.708125e-53	1.318434e-50
MsaG019267	MsaG011183	0.807018	1.053010e-49	1.673903e-47
MsaG019285	MsaG011183	0.850907	2.391007e-60	1.337122e-57
MsaG019310	MsaG011183	0.810297	2.114499e-50	3.637206e-48
MsaG019491	MsaG011183	0.874900	9.736240e-68	1.394092e-64
MsaG019526	MsaG011183	0.802102	1.104026e-48	1.565410e-46
MsaG019527	MsaG011183	0.802320	9.961516e-49	1.419615e-46
MsaG019577	MsaG011183	0.862296	1.109479e-63	9.418933e-61
MsaG019638	MsaG011183	0.817321	6.094827e-52	1.250104e-49
MsaG019649	MsaG011183	0.801267	1.634809e-48	2.274478e-46
MsaG019728	MsaG011183	0.820234	1.338564e-52	2.962466e-50
MsaG019924	MsaG011183	0.864920	1.715385e-64	1.615425e-61
MsaG019936	MsaG011183	0.805337	2.370031e-49	3.621323e-47
MsaG019977	MsaG011183	0.836122	2.057944e-56	7.129275e-54
MsaG020021	MsaG011183	0.832288	1.861469e-55	5.755480e-53
MsaG020076	MsaG011183	0.818942	2.631345e-52	5.628295e-50
MsaG020233	MsaG011183	0.803630	5.357694e-49	7.868468e-47
MsaG020230	MsaG011183	0.818666	3.037522e-52	6.450222e-50
MsaG020321	MsaG011183	0.834191	6.283283e-56	2.054293e-53
MsaG020598	MsaG011183	0.884774	3.095548e-71	7.011270e-68
MsaG020733	MsaG011183	0.871585	1.249202e-66	1.548579e-63
MsaG020812	MsaG011183	0.932100	3.908253e-94	1.892028e-89
MsaG020951	MsaG011183	0.820989	8.997662e-53	2.031436e-50
MsaG021040	MsaG011183	0.800376	2.481230e-48	3.383352e-46
MsaG021515	MsaG011183	0.874446	1.387060e-67	1.947157e-64
MsaG021668	MsaG011183	0.828588	1.480852e-54	4.117035e-52
MsaG021629	MsaG011183	0.833668	8.478971e-56	2.729820e-53
MsaG021737	MsaG011183	0.827287	3.034275e-54	8.133347e-52
MsaG022438	MsaG011183	0.819475	1.991714e-52	4.320241e-50
MsaG022440	MsaG011183	0.848227	1.327030e-59	6.771293e-57
MsaG022441	MsaG011183	0.840211	1.842356e-57	7.239753e-55
MsaG022811	MsaG011183	0.840976	1.164187e-57	4.686330e-55
MsaG023188	MsaG011183	0.826340	5.096099e-54	1.330390e-51
MsaG023243	MsaG011183	0.825290	9.017705e-54	2.286555e-51
MsaG023326	MsaG011183	0.839700	2.500883e-57	9.671380e-55
MsaG023743	MsaG011183	0.810057	2.381115e-50	4.071881e-48
MsaG023729	MsaG011183	0.886661	6.103795e-72	1.517788e-68
MsaG023861	MsaG011183	0.818405	3.478673e-52	7.337020e-50
MsaG023924	MsaG011183	0.832680	1.490252e-55	4.660306e-53
MsaG024006	MsaG011183	0.835971	2.246172e-56	7.745833e-54
MsaG024015	MsaG011183	0.834274	5.992090e-56	1.963956e-53
MsaG024023	MsaG011183	0.801040	1.818615e-48	2.517263e-46
MsaG024291	MsaG011183	0.862307	1.100971e-63	9.350545e-61
MsaG025067	MsaG011183	0.804064	4.356806e-49	6.463719e-47
MsaG025143	MsaG011183	0.835288	3.338381e-56	1.127873e-53
MsaG026624	MsaG011183	0.857578	2.890670e-62	2.051943e-59
MsaG026587	MsaG011183	0.818934	2.641926e-52	5.649812e-50
MsaG026686	MsaG011183	0.838398	5.415831e-57	2.010835e-54
MsaG026692	MsaG011183	0.822247	4.620628e-53	1.078670e-50
MsaG027170	MsaG011183	0.836699	1.469597e-56	5.180262e-54
MsaG027198	MsaG011183	0.829526	8.794475e-55	2.510902e-52
MsaG027207	MsaG011183	0.813288	4.755977e-51	8.806685e-49
MsaG027210	MsaG011183	0.835408	3.113279e-56	1.055654e-53
MsaG027232	MsaG011183	0.842281	5.291844e-58	2.220431e-55
MsaG027371	MsaG011183	0.828307	1.729974e-54	4.771680e-52
MsaG027457	MsaG011183	0.851169	2.019384e-60	1.139439e-57
MsaG027483	MsaG011183	0.862758	8.004844e-64	6.920525e-61
MsaG027511	MsaG011183	0.877033	1.813252e-68	2.856111e-65
MsaG027807	MsaG011183	0.828574	1.491969e-54	4.146357e-52
MsaG027963	MsaG011183	0.861105	2.555740e-63	2.072394e-60
MsaG027984	MsaG011183	0.890775	1.601087e-73	4.913700e-70
MsaG027987	MsaG011183	0.809113	3.788959e-50	6.333577e-48
MsaG028026	MsaG011183	0.817923	4.466486e-52	9.304099e-50
MsaG028028	MsaG011183	0.888845	8.998795e-73	2.497561e-69
MsaG028191	MsaG011183	0.855365	1.281650e-61	8.390089e-59
MsaG028211	MsaG011183	0.902393	2.360091e-78	1.390359e-74
MsaG028234	MsaG011183	0.875072	8.512354e-68	1.227999e-64
MsaG028335	MsaG011183	0.926575	1.035577e-90	3.211397e-86
MsaG028531	MsaG011183	0.871284	1.569368e-66	1.920389e-63
MsaG029141	MsaG011183	0.859601	7.249343e-63	5.551571e-60
MsaG029086	MsaG011183	0.813553	4.163448e-51	7.760964e-49
MsaG029177	MsaG011183	0.847415	2.215775e-59	1.100276e-56
MsaG029188	MsaG011183	0.820633	1.085272e-52	2.427148e-50
MsaG029204	MsaG011183	0.876273	3.310787e-68	5.039518e-65
MsaG029388	MsaG011183	0.860324	4.397403e-63	3.462257e-60
MsaG029324	MsaG011183	0.820741	1.025488e-52	2.299959e-50
MsaG029340	MsaG011183	0.806682	1.239160e-49	1.954316e-47
MsaG029546	MsaG011183	0.806209	1.557785e-49	2.429581e-47
MsaG029579	MsaG011183	0.800069	2.862603e-48	3.876510e-46
MsaG029953	MsaG011183	0.809112	3.791468e-50	6.337579e-48
MsaG030198	MsaG011183	0.846262	4.564618e-59	2.180784e-56
MsaG030471	MsaG011183	0.830973	3.913413e-55	1.164548e-52
MsaG030649	MsaG011183	0.833960	7.175869e-56	2.329974e-53
MsaG031043	MsaG011183	0.861701	1.684940e-63	1.397722e-60
MsaG031091	MsaG011183	0.862660	8.583213e-64	7.391274e-61
MsaG031129	MsaG011183	0.893682	1.118621e-74	4.011359e-71
MsaG031799	MsaG011183	0.832372	1.775442e-55	5.502734e-53
MsaG032115	MsaG011183	0.849647	5.375445e-60	2.878746e-57
MsaG032479	MsaG011183	0.836499	1.651563e-56	5.786752e-54
MsaG032477	MsaG011183	0.836008	2.197857e-56	7.587835e-54
MsaG032512	MsaG011183	0.804010	4.470344e-49	6.623683e-47
MsaG032848	MsaG011183	0.847243	2.467821e-59	1.218417e-56
MsaG032901	MsaG011183	0.813260	4.824440e-51	8.927177e-49
MsaG032947	MsaG011183	0.836436	1.713458e-56	5.992523e-54
MsaG033051	MsaG011183	0.859156	9.848138e-63	7.414989e-60
MsaG033693	MsaG011183	0.818099	4.076677e-52	8.530722e-50
MsaG033746	MsaG011183	0.834814	4.390817e-56	1.462617e-53
MsaG034108	MsaG011183	0.834775	4.490821e-56	1.494202e-53
MsaG034319	MsaG011183	0.844008	1.843334e-58	8.174974e-56
MsaG034337	MsaG011183	0.835927	2.304854e-56	7.937837e-54
MsaG034741	MsaG011183	0.815745	1.368824e-51	2.696409e-49
MsaG034836	MsaG011183	0.935920	1.127080e-96	7.484801e-92
MsaG034998	MsaG011183	0.812752	6.226740e-51	1.137700e-48
MsaG035057	MsaG011183	0.831727	2.558772e-55	7.784034e-53
MsaG035233	MsaG011183	0.876627	2.502165e-68	3.869316e-65
MsaG035532	MsaG011183	0.819648	1.819650e-52	3.964765e-50
MsaG035533	MsaG011183	0.834726	4.619044e-56	1.534652e-53
MsaG035552	MsaG011183	0.872320	7.139715e-67	9.133986e-64
MsaG036065	MsaG011183	0.888598	1.118937e-72	3.067447e-69
MsaG036335	MsaG011183	0.821683	6.233444e-53	1.433423e-50
MsaG038421	MsaG011183	0.807139	9.932202e-50	1.583343e-47
MsaG039178	MsaG011183	0.821748	6.022235e-53	1.387261e-50
MsaG039751	MsaG011183	0.813028	5.421390e-51	9.974165e-49
MsaG039962	MsaG011183	0.818521	3.275619e-52	6.929692e-50
MsaG040428	MsaG011183	0.833354	1.014813e-55	3.237004e-53
MsaG040504	MsaG011183	0.889631	4.471121e-73	1.292995e-69
MsaG040611	MsaG011183	0.817027	7.091437e-52	1.443569e-49
MsaG040714	MsaG011183	0.834870	4.249088e-56	1.417798e-53
MsaG041011	MsaG011183	0.823187	2.798176e-53	6.700189e-51
MsaG041040	MsaG011183	0.801521	1.451289e-48	2.030825e-46
MsaG041253	MsaG011183	0.822045	5.144205e-53	1.194416e-50
MsaG041754	MsaG011183	0.811514	1.156024e-50	2.048560e-48
MsaG041800	MsaG011183	0.872789	4.985965e-67	6.508306e-64

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG011183	MtrunA17_Chr2g0333541	85.603	257	32	2	1	255	1	254	2.22e-146	410
MsaG011183	MtrunA17_Chr8g0368371	78.723	141	15	1	1	126	1	141	5.39e-73	219
MsaG011183	MtrunA17_Chr8g0336681	48.315	178	83	4	86	255	145	321	1.99e-42	147
MsaG011183	MtrunA17_Chr2g0333621	38.328	287	138	9	1	256	20	298	4.88e-42	145
MsaG011183	MtrunA17_Chr2g0333641	37.818	275	140	9	4	253	23	291	8.72e-42	145
MsaG011183	MtrunA17_Chr4g0002801	40.385	208	113	4	59	255	109	316	1.93e-38	137
MsaG011183	MtrunA17_Chr5g0400621	43.429	175	95	3	82	255	144	315	3.45e-38	136
MsaG011183	MtrunA17_Chr2g0280161	40.000	170	99	3	88	255	168	336	2.95e-35	129
MsaG011183	MtrunA17_Chr4g0002781	43.353	173	95	3	79	248	156	328	1.32e-34	127
MsaG011183	MtrunA17_Chr4g0054561	39.181	171	92	4	90	255	148	311	2.47e-34	125
MsaG011183	MtrunA17_Chr4g0033291	42.529	174	91	5	84	255	144	310	2.98e-34	125
MsaG011183	MtrunA17_Chr4g0054581	36.620	213	123	3	53	255	150	360	9.08e-34	125
MsaG011183	MtrunA17_Chr4g0054551	40.936	171	89	5	90	255	148	311	2.24e-33	123
MsaG011183	MtrunA17_Chr2g0307131	41.341	179	90	5	84	255	167	337	4.73e-33	123
MsaG011183	MtrunA17_Chr4g0033391	40.462	173	96	4	84	255	136	302	5.38e-33	122
MsaG011183	MtrunA17_Chr7g0249811	45.455	165	78	4	86	248	153	307	1.59e-32	121
MsaG011183	MtrunA17_Chr5g0400671	40.805	174	93	4	77	248	137	302	2.06e-32	120
MsaG011183	MtrunA17_Chr7g0225901	38.798	183	96	4	75	249	66	240	3.45e-32	118
MsaG011183	MtrunA17_Chr4g0033281	39.189	222	119	5	43	255	93	307	7.52e-32	119
MsaG011183	MtrunA17_Chr5g0400641	40.120	167	78	3	100	255	1	156	7.75e-32	115
MsaG011183	MtrunA17_Chr2g0333611	41.624	197	102	7	64	255	13	201	1.49e-31	115
MsaG011183	MtrunA17_Chr5g0400661	36.364	231	119	6	53	255	90	320	1.76e-31	118
MsaG011183	MtrunA17_Chr2g0307141	40.625	160	93	2	97	255	183	341	6.48e-31	117
MsaG011183	MtrunA17_Chr6g0468491	38.251	183	110	3	75	255	114	295	8.52e-29	110
MsaG011183	MtrunA17_Chr4g0049331	36.025	161	99	3	97	255	135	293	1.16e-26	105
MsaG011183	MtrunA17_Chr4g0054621	30.612	245	150	6	19	255	91	323	1.59e-26	105
MsaG011183	MtrunA17_Chr6g0468461	32.075	265	135	8	5	249	72	311	5.88e-24	98.6
MsaG011183	MtrunA17_Chr7g0233441	36.250	160	77	6	102	256	44	183	6.17e-21	87.4
MsaG011183	MtrunA17_Chr4g0002851	37.179	156	77	5	101	255	47	182	1.01e-19	84.3
MsaG011183	MtrunA17_Chr4g0054571	38.509	161	92	3	95	248	148	308	1.52e-19	86.3
MsaG011183	MtrunA17_Chr4g0002831	38.750	160	81	9	99	255	45	190	1.13e-18	81.6
MsaG011183	MtrunA17_Chr8g0365711	25.328	229	147	8	37	246	175	398	7.18e-13	67.8
MsaG011183	MtrunA17_Chr5g0411341	25.000	172	106	5	87	235	475	646	2.30e-11	63.5
MsaG011183	MtrunA17_Chr8g0366751	23.864	176	119	3	87	251	451	622	5.31e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG011183	AT4G37850.2	36.715	207	126	3	54	255	105	311	5.04e-36	130
MsaG011183	AT4G37850.1	36.715	207	126	3	54	255	105	311	5.04e-36	130
MsaG011183	AT2G22750.2	43.275	171	93	1	90	256	119	289	1.34e-32	121
MsaG011183	AT2G22750.1	45.399	163	85	1	90	248	119	281	1.57e-32	121
MsaG011183	AT2G22750.5	43.275	171	93	1	90	256	143	313	2.50e-32	121
MsaG011183	AT2G22750.3	43.275	171	93	1	90	256	147	317	2.69e-32	121
MsaG011183	AT2G22750.4	45.399	163	85	1	90	248	147	309	3.43e-32	120
MsaG011183	AT2G22760.1	33.136	169	110	3	90	255	112	280	1.74e-24	99.4
MsaG011183	AT2G22760.2	34.568	162	103	3	90	248	112	273	3.96e-24	98.2
MsaG011183	AT2G22770.1	34.132	167	95	3	97	248	132	298	1.61e-22	94.7
MsaG011183	AT4G29930.2	29.101	189	115	5	67	249	22	197	3.56e-16	75.5
MsaG011183	AT4G29930.6	29.032	186	122	3	67	249	22	200	4.13e-16	75.5
MsaG011183	AT4G29930.5	28.421	190	117	5	67	250	22	198	1.36e-15	74.3
MsaG011183	AT4G29930.1	26.923	208	124	5	67	249	22	226	2.33e-14	71.2
MsaG011183	AT4G17880.1	26.744	172	92	5	87	235	398	558	2.88e-14	72.4
MsaG011183	AT5G46760.1	26.437	174	94	5	87	235	397	561	4.61e-14	72.0
MsaG011183	AT4G29930.3	25.822	213	122	5	67	250	22	227	8.06e-14	69.7
MsaG011183	AT4G29930.7	25.822	213	122	5	67	250	22	227	8.06e-14	69.7
MsaG011183	AT4G09820.1	32.450	151	77	4	85	234	351	477	9.53e-14	70.9
MsaG011183	AT5G57150.1	26.316	190	131	4	69	249	25	214	2.43e-13	68.2
MsaG011183	AT5G57150.5	25.907	193	134	4	69	252	25	217	7.50e-13	66.2
MsaG011183	AT5G57150.2	25.389	193	135	4	68	251	25	217	2.47e-12	65.1
MsaG011183	AT5G57150.3	24.742	194	137	4	68	252	25	218	5.21e-12	63.9
MsaG011183	AT1G63650.3	28.846	156	94	4	89	227	397	552	9.41e-12	65.1
MsaG011183	AT1G63650.1	28.846	156	94	4	89	227	397	552	9.41e-12	65.1
MsaG011183	AT1G63650.2	28.846	156	94	4	89	227	397	552	9.41e-12	65.1
MsaG011183	AT5G41315.3	27.778	162	93	5	89	227	438	598	5.04e-11	62.8
MsaG011183	AT5G41315.1	27.778	162	93	5	89	227	433	593	5.17e-11	62.8
MsaG011183	AT5G57150.4	25.263	190	133	4	68	248	25	214	5.29e-11	61.6
MsaG011183	AT5G41315.2	27.778	162	93	5	89	227	441	601	5.34e-11	62.8

Find 47 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAGGTTGAAGTTAGGGTTCT+TGG	0.250504	2:-82307050	MsaT011183.1:CDS
CAAGACATTGGTACTTGTTA+TGG	0.311267	2:+82306941	None:intergenic
CACTTCTAGAGGTTGAAGTT+AGG	0.322662	2:-82307058	MsaT011183.1:CDS
ACTAGGCCAGTTGTGGCAAT+AGG	0.327076	2:+82307640	None:intergenic
ATTACTTGCCTGGGCAATAA+TGG	0.348494	2:+82306893	None:intergenic
AGTACCAATGTCTTGCCATT+TGG	0.350019	2:-82306933	MsaT011183.1:CDS
CTTCTTCAATCCAGGTATAA+AGG	0.361311	2:+82307381	None:intergenic
AAGTAAGATCATAGAACTTT+CGG	0.375512	2:-82307404	MsaT011183.1:CDS
ACATAATGTCGGAGAGGAAT+AGG	0.390434	2:-82307441	MsaT011183.1:CDS
AGGTTGAAGTTAGGGTTCTT+GGG	0.401255	2:-82307049	MsaT011183.1:CDS
ACTTCTAGAGGTTGAAGTTA+GGG	0.415145	2:-82307057	MsaT011183.1:CDS
GAACTTTCGGCCTTTATACC+TGG	0.434477	2:-82307391	MsaT011183.1:CDS
TGATGGATGAGTTGTTTACT+AGG	0.442805	2:+82307623	None:intergenic
CTAGGCCAGTTGTGGCAATA+GGG	0.443059	2:+82307641	None:intergenic
GATCTTGTGGAGTCTGATAC+AGG	0.452617	2:+82307674	None:intergenic
AGTTGAATGTGACACATTGA+TGG	0.456224	2:+82307606	None:intergenic
CTTTATACCTGGATTGAAGA+AGG	0.465281	2:-82307380	MsaT011183.1:intron
AATGGCTGTGTAGATTGATA+AGG	0.480377	2:-82307261	MsaT011183.1:intron
TGAAGTTAGGGTTCTTGGGA+AGG	0.483922	2:-82307045	MsaT011183.1:CDS
ATACTAACCTTCTTCAATCC+AGG	0.486683	2:+82307373	None:intergenic
AGTGTCCCTATTGCCACAAC+TGG	0.491296	2:-82307646	MsaT011183.1:CDS
GACATTAAGAAGAAAGATGC+AGG	0.492316	2:-82307170	MsaT011183.1:CDS
TCATGGTGTTGTTCAATTGT+TGG	0.495507	2:+82307544	None:intergenic
AATGTCTCAGAAGCGCTTCG+AGG	0.506140	2:+82307469	None:intergenic
GCTTCTTTGAATTCGACCCT+TGG	0.521451	2:+82307491	None:intergenic
ATGACAAAGGCAAAGAATCA+TGG	0.529186	2:+82307527	None:intergenic
TGACATCACCATTATTGCCC+AGG	0.532981	2:-82306901	MsaT011183.1:CDS
TGATAAGGTTCATGTGATAA+CGG	0.539677	2:-82307246	MsaT011183.1:CDS
GGTATTGATAATGAGTTGGT+TGG	0.541397	2:+82307565	None:intergenic
GTGAAATGAACACTGAAGAA+TGG	0.542671	2:-82307091	MsaT011183.1:CDS
TTTGCCTTTGTCATCATCAA+CGG	0.545210	2:-82307518	MsaT011183.1:CDS
ATTAACAAAGACACTGCAAT+CGG	0.547823	2:-82307113	MsaT011183.1:CDS
ATGTCAAGAGTATTTCCAAA+TGG	0.548099	2:+82306918	None:intergenic
TGTTAATCAAGATTCATTGT+GGG	0.549660	2:-82307019	MsaT011183.1:CDS
TGTTGGTATTGATAATGAGT+TGG	0.562767	2:+82307561	None:intergenic
ATTTCCAAATGGCAAGACAT+TGG	0.571967	2:+82306929	None:intergenic
GTGTTAATCAAGATTCATTG+TGG	0.578908	2:-82307020	MsaT011183.1:CDS
GACATTAGATCACATAATGT+CGG	0.591474	2:-82307452	MsaT011183.1:CDS
GCGAAATGAATCACTTCTAG+AGG	0.597091	2:-82307069	MsaT011183.1:CDS
GGGACACTGAATTGATCTTG+TGG	0.603401	2:+82307661	None:intergenic
GTTGTTTACTAGGCCAGTTG+TGG	0.626590	2:+82307633	None:intergenic
TCATCATCAACGGATAACCA+AGG	0.662866	2:-82307508	MsaT011183.1:CDS
CATCATCAACGGATAACCAA+GGG	0.664890	2:-82307507	MsaT011183.1:CDS
TTATCCGTTGATGATGACAA+AGG	0.681037	2:+82307514	None:intergenic
TAGATCACATAATGTCGGAG+AGG	0.685140	2:-82307447	MsaT011183.1:CDS
TGGGATGCAAGAAGAGATTG+TGG	0.685234	2:-82307000	MsaT011183.1:CDS
TCTGATACAGGATATCTCTG+AGG	0.706562	2:+82307686	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	82306492	82307755	82306492	ID=MsaG011183
Chr2	mRNA	82306492	82307755	82306492	ID=MsaT011183.1;Parent=MsaG011183
Chr2	exon	82306492	82306514	82306492	ID=MsaT011183.1.exon3;Parent=MsaT011183.1
Chr2	CDS	82306492	82306514	82306492	ID=cds.MsaT011183.1;Parent=MsaT011183.1
Chr2	exon	82306898	82307270	82306898	ID=MsaT011183.1.exon2;Parent=MsaT011183.1
Chr2	CDS	82306898	82307270	82306898	ID=cds.MsaT011183.1;Parent=MsaT011183.1
Chr2	exon	82307381	82307755	82307381	ID=MsaT011183.1.exon1;Parent=MsaT011183.1
Chr2	CDS	82307381	82307755	82307381	ID=cds.MsaT011183.1;Parent=MsaT011183.1

Gene Sequence

>MsaT011183.1

ATGGAAGAACATTTGTGTCACACAAACAGCACATTTGATGAAGAGTTCCTCAGAGATATCCTGTATCAGACTCCACAAGATCAATTCAGTGTCCCTATTGCCACAACTGGCCTAGTAAACAACTCATCCATCAATGTGTCACATTCAACTCAACATGCTGAAGAAAATCCAACCAACTCATTATCAATACCAACAATTGAACAACACCATGATTCTTTGCCTTTGTCATCATCAACGGATAACCAAGGGTCGAATTCAAAGAAGCCTCGAAGCGCTTCTGAGACATTAGATCACATAATGTCGGAGAGGAATAGGAGACAACTACTTACAAGTAAGATCATAGAACTTTCGGCCTTTATACCTGGATTGAAGAAGATTGATAAGGTTCATGTGATAACGGAAGCTATCAATTACGTGAAACATCTTGAAGAACGTTTGAAAGAGCTAGAAGAAGACATTAAGAAGAAAGATGCAGGATCATTGAGCACCATAAAAAGATCTCGTGTTCTAATTAACAAAGACACTGCAATCGGTGAAATGAACACTGAAGAATGGCGAAATGAATCACTTCTAGAGGTTGAAGTTAGGGTTCTTGGGAAGGAAGTGTTAATCAAGATTCATTGTGGGATGCAAGAAGAGATTGTGGTCAATATAATGTTGCAGCTTCAAATTCTTCATCTCTCCATAACAAGTACCAATGTCTTGCCATTTGGAAATACTCTTGACATCACCATTATTGCCCAGGCAAGTTTAGGCTATGCTCTTGAATAA

Protein sequence

>MsaT011183.1

MEEHLCHTNSTFDEEFLRDILYQTPQDQFSVPIATTGLVNNSSINVSHSTQHAEENPTNSLSIPTIEQHHDSLPLSSSTDNQGSNSKKPRSASETLDHIMSERNRRQLLTSKIIELSAFIPGLKKIDKVHVITEAINYVKHLEERLKELEEDIKKKDAGSLSTIKRSRVLINKDTAIGEMNTEEWRNESLLEVEVRVLGKEVLIKIHCGMQEEIVVNIMLQLQILHLSITSTNVLPFGNTLDITIIAQASLGYALE*