Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG011601 | RHN65210.1 | 50.633 | 237 | 104 | 4 | 14 | 240 | 232 | 465 | 3.51e-62 | 220 |
MsaG011601 | RHN65210.1 | 86.344 | 454 | 52 | 4 | 34 | 484 | 22 | 468 | 0.0 | 799 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG011601 | sp|Q84R27|Y3896_ARATH | 39.167 | 120 | 73 | 0 | 237 | 356 | 11 | 130 | 7.30e-22 | 96.7 |
MsaG011601 | sp|Q84R27|Y3896_ARATH | 35.714 | 112 | 72 | 0 | 6 | 117 | 17 | 128 | 1.34e-16 | 81.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG011601 | tr|A0A396IJ58|A0A396IJ58_MEDTR | 50.633 | 237 | 104 | 4 | 14 | 240 | 232 | 465 | 1.68e-62 | 220 |
MsaG011601 | tr|A0A396IJ58|A0A396IJ58_MEDTR | 86.344 | 454 | 52 | 4 | 34 | 484 | 22 | 468 | 0.0 | 799 |
Gene ID | Type | Classification |
---|---|---|
MsaG011601 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG000200 | MsaG011601 | 0.805452 | 2.242160e-49 | 3.435154e-47 |
MsaG000379 | MsaG011601 | 0.806314 | 1.480572e-49 | 2.314880e-47 |
MsaG000479 | MsaG011601 | 0.841907 | 6.639495e-58 | 2.753015e-55 |
MsaG000583 | MsaG011601 | 0.838478 | 5.165194e-57 | 1.922668e-54 |
MsaG000842 | MsaG011601 | 0.803528 | 5.622219e-49 | 8.237801e-47 |
MsaG002065 | MsaG011601 | 0.820558 | 1.128845e-52 | 2.519672e-50 |
MsaG002209 | MsaG011601 | 0.825898 | 6.482050e-54 | 1.671651e-51 |
MsaG002405 | MsaG011601 | 0.808728 | 4.575840e-50 | 7.578543e-48 |
MsaG002484 | MsaG011601 | 0.816153 | 1.110940e-51 | 2.211292e-49 |
MsaG002731 | MsaG011601 | 0.858539 | 1.502713e-62 | 1.105694e-59 |
MsaG002975 | MsaG011601 | 0.809400 | 3.291485e-50 | 5.540004e-48 |
MsaG003305 | MsaG011601 | 0.866882 | 4.142966e-65 | 4.223045e-62 |
MsaG003986 | MsaG011601 | 0.800194 | 2.700453e-48 | 3.667089e-46 |
MsaG003896 | MsaG011601 | 0.823670 | 2.160393e-53 | 5.241469e-51 |
MsaG003938 | MsaG011601 | 0.820200 | 1.362391e-52 | 3.012494e-50 |
MsaG004227 | MsaG011601 | 0.839923 | 2.188176e-57 | 8.521892e-55 |
MsaG004186 | MsaG011601 | 0.857675 | 2.707858e-62 | 1.929002e-59 |
MsaG004199 | MsaG011601 | 0.810081 | 2.352756e-50 | 4.025751e-48 |
MsaG004306 | MsaG011601 | 0.808822 | 4.371149e-50 | 7.255637e-48 |
MsaG004367 | MsaG011601 | 0.825737 | 7.075122e-54 | 1.816386e-51 |
MsaG004418 | MsaG011601 | 0.828972 | 1.196686e-54 | 3.362914e-52 |
MsaG004465 | MsaG011601 | 0.836347 | 1.804435e-56 | 6.293773e-54 |
MsaG004993 | MsaG011601 | 0.827895 | 2.171641e-54 | 5.921293e-52 |
MsaG005023 | MsaG011601 | 0.837125 | 1.145230e-56 | 4.089267e-54 |
MsaG005288 | MsaG011601 | 0.851469 | 1.662126e-60 | 9.477170e-58 |
MsaG005664 | MsaG011601 | 0.837539 | 8.986731e-57 | 3.249749e-54 |
MsaG005850 | MsaG011601 | 0.814803 | 2.211122e-51 | 4.253192e-49 |
MsaG005928 | MsaG011601 | 0.860802 | 3.156318e-63 | 2.530379e-60 |
MsaG005941 | MsaG011601 | 0.805965 | 1.751542e-49 | 2.715914e-47 |
MsaG005942 | MsaG011601 | 0.857901 | 2.322016e-62 | 1.668204e-59 |
MsaG005948 | MsaG011601 | 0.813174 | 5.038871e-51 | 9.303996e-49 |
MsaG006136 | MsaG011601 | 0.820800 | 9.940723e-53 | 2.233007e-50 |
MsaG006552 | MsaG011601 | 0.826870 | 3.814253e-54 | 1.010550e-51 |
MsaG006743 | MsaG011601 | 0.841031 | 1.126487e-57 | 4.542565e-55 |
MsaG006909 | MsaG011601 | 0.834869 | 4.252076e-56 | 1.418743e-53 |
MsaG006910 | MsaG011601 | 0.835853 | 2.405850e-56 | 8.267148e-54 |
MsaG007094 | MsaG011601 | 0.817999 | 4.293799e-52 | 8.962163e-50 |
MsaG007525 | MsaG011601 | 0.814870 | 2.137857e-51 | 4.119132e-49 |
MsaG007759 | MsaG011601 | 0.815656 | 1.432314e-51 | 2.815214e-49 |
MsaG008019 | MsaG011601 | 0.819150 | 2.360362e-52 | 5.076451e-50 |
MsaG008080 | MsaG011601 | 0.801172 | 1.709352e-48 | 2.373108e-46 |
MsaG008148 | MsaG011601 | 0.894243 | 6.631806e-75 | 2.452122e-71 |
MsaG009004 | MsaG011601 | 0.830505 | 5.090077e-55 | 1.494423e-52 |
MsaG009548 | MsaG011601 | 0.808283 | 5.688458e-50 | 9.320581e-48 |
MsaG009891 | MsaG011601 | 0.807234 | 9.481099e-50 | 1.514834e-47 |
MsaG010621 | MsaG011601 | 0.848690 | 9.894431e-60 | 5.128263e-57 |
MsaG010622 | MsaG011601 | 0.805376 | 2.326121e-49 | 3.557462e-47 |
MsaG010703 | MsaG011601 | 0.829230 | 1.036760e-54 | 2.934727e-52 |
MsaG011133 | MsaG011601 | 0.846485 | 3.969755e-59 | 1.910636e-56 |
MsaG011587 | MsaG011601 | 0.853389 | 4.747719e-61 | 2.895997e-58 |
MsaG011601 | MsaG011627 | 0.833692 | 8.363198e-56 | 2.694454e-53 |
MsaG011601 | MsaG012174 | 0.803885 | 4.745494e-49 | 7.010721e-47 |
MsaG011601 | MsaG012440 | 0.814608 | 2.441668e-51 | 4.673386e-49 |
MsaG011601 | MsaG012595 | 0.821969 | 5.357156e-53 | 1.241299e-50 |
MsaG011601 | MsaG012657 | 0.824272 | 1.563489e-53 | 3.855561e-51 |
MsaG011601 | MsaG013177 | 0.845107 | 9.358052e-59 | 4.303332e-56 |
MsaG011601 | MsaG013272 | 0.811790 | 1.007381e-50 | 1.797291e-48 |
MsaG011601 | MsaG013426 | 0.826268 | 5.299695e-54 | 1.380758e-51 |
MsaG011601 | MsaG013687 | 0.812755 | 6.218148e-51 | 1.136215e-48 |
MsaG011601 | MsaG013895 | 0.833901 | 7.421532e-56 | 2.405606e-53 |
MsaG011601 | MsaG014560 | 0.803011 | 7.185342e-49 | 1.040315e-46 |
MsaG011601 | MsaG015096 | 0.811799 | 1.003199e-50 | 1.790232e-48 |
MsaG011601 | MsaG015291 | 0.817614 | 5.240454e-52 | 1.082944e-49 |
MsaG011601 | MsaG015349 | 0.808488 | 5.146023e-50 | 8.473482e-48 |
MsaG011601 | MsaG015353 | 0.829090 | 1.121234e-54 | 3.161436e-52 |
MsaG011601 | MsaG015833 | 0.806054 | 1.678554e-49 | 2.608220e-47 |
MsaG011601 | MsaG015865 | 0.826450 | 4.799191e-54 | 1.256788e-51 |
MsaG011601 | MsaG016578 | 0.812199 | 8.216126e-51 | 1.480642e-48 |
MsaG011601 | MsaG016707 | 0.800668 | 2.164419e-48 | 2.970994e-46 |
MsaG011601 | MsaG016827 | 0.846665 | 3.546316e-59 | 1.717154e-56 |
MsaG011601 | MsaG016972 | 0.855770 | 9.780092e-62 | 6.496084e-59 |
MsaG011601 | MsaG017085 | 0.870754 | 2.342153e-66 | 2.801796e-63 |
MsaG011601 | MsaG017107 | 0.804942 | 2.863812e-49 | 4.335867e-47 |
MsaG011601 | MsaG017267 | 0.862284 | 1.118738e-63 | 9.492966e-61 |
MsaG011601 | MsaG017679 | 0.820011 | 1.505043e-52 | 3.311150e-50 |
MsaG011601 | MsaG017802 | 0.802884 | 7.632363e-49 | 1.101784e-46 |
MsaG011601 | MsaG018063 | 0.830440 | 5.277729e-55 | 1.546729e-52 |
MsaG011601 | MsaG018234 | 0.844184 | 1.653749e-58 | 7.377521e-56 |
MsaG011601 | MsaG018305 | 0.818489 | 3.329207e-52 | 7.037233e-50 |
MsaG011601 | MsaG018468 | 0.870958 | 2.008809e-66 | 2.424337e-63 |
MsaG011601 | MsaG018427 | 0.870523 | 2.786315e-66 | 3.300078e-63 |
MsaG011601 | MsaG018642 | 0.899749 | 3.344323e-77 | 1.686176e-73 |
MsaG011601 | MsaG018726 | 0.805416 | 2.281781e-49 | 3.492811e-47 |
MsaG011601 | MsaG018847 | 0.873168 | 3.726926e-67 | 4.946488e-64 |
MsaG011601 | MsaG019292 | 0.815599 | 1.474870e-51 | 2.894627e-49 |
MsaG011601 | MsaG019456 | 0.816213 | 1.077261e-51 | 2.147534e-49 |
MsaG011601 | MsaG019621 | 0.810261 | 2.152999e-50 | 3.700164e-48 |
MsaG011601 | MsaG019629 | 0.819829 | 1.655434e-52 | 3.624271e-50 |
MsaG011601 | MsaG020017 | 0.824660 | 1.268425e-53 | 3.161141e-51 |
MsaG011601 | MsaG020137 | 0.805657 | 2.032358e-49 | 3.128622e-47 |
MsaG011601 | MsaG020365 | 0.804097 | 4.289466e-49 | 6.368648e-47 |
MsaG011601 | MsaG020567 | 0.860604 | 3.621212e-63 | 2.881411e-60 |
MsaG011601 | MsaG020780 | 0.814564 | 2.496568e-51 | 4.773225e-49 |
MsaG011601 | MsaG021001 | 0.851594 | 1.533136e-60 | 8.778756e-58 |
MsaG011601 | MsaG021418 | 0.813354 | 4.601444e-51 | 8.534617e-49 |
MsaG011601 | MsaG022216 | 0.855251 | 1.382921e-61 | 9.015649e-59 |
MsaG011601 | MsaG022478 | 0.805052 | 2.717384e-49 | 4.124779e-47 |
MsaG011601 | MsaG022712 | 0.841707 | 7.494774e-58 | 3.087581e-55 |
MsaG011601 | MsaG022713 | 0.830178 | 6.112850e-55 | 1.778139e-52 |
MsaG011601 | MsaG022820 | 0.842236 | 5.439606e-58 | 2.279004e-55 |
MsaG011601 | MsaG022824 | 0.871488 | 1.344812e-66 | 1.659951e-63 |
MsaG011601 | MsaG023177 | 0.856174 | 7.458464e-62 | 5.028442e-59 |
MsaG011601 | MsaG023399 | 0.828436 | 1.610973e-54 | 4.459831e-52 |
MsaG011601 | MsaG023442 | 0.862618 | 8.840429e-64 | 7.601007e-61 |
MsaG011601 | MsaG024143 | 0.805919 | 1.790995e-49 | 2.774079e-47 |
MsaG011601 | MsaG024150 | 0.860732 | 3.312097e-63 | 2.648428e-60 |
MsaG011601 | MsaG024152 | 0.858914 | 1.161998e-62 | 8.669825e-60 |
MsaG011601 | MsaG024586 | 0.883339 | 1.042906e-70 | 2.204202e-67 |
MsaG011601 | MsaG024983 | 0.845268 | 8.470349e-59 | 3.915367e-56 |
MsaG011601 | MsaG025160 | 0.810535 | 1.879754e-50 | 3.252293e-48 |
MsaG011601 | MsaG025404 | 0.842685 | 4.138852e-58 | 1.759420e-55 |
MsaG011601 | MsaG025451 | 0.826085 | 5.854184e-54 | 1.517586e-51 |
MsaG011601 | MsaG025779 | 0.846984 | 2.903749e-59 | 1.421185e-56 |
MsaG011601 | MsaG026770 | 0.809380 | 3.323688e-50 | 5.591453e-48 |
MsaG011601 | MsaG026926 | 0.825922 | 6.397145e-54 | 1.650874e-51 |
MsaG011601 | MsaG026966 | 0.810234 | 2.182087e-50 | 3.747635e-48 |
MsaG011601 | MsaG026996 | 0.816056 | 1.167643e-51 | 2.318338e-49 |
MsaG011601 | MsaG027001 | 0.811722 | 1.042334e-50 | 1.856526e-48 |
MsaG011601 | MsaG027033 | 0.837897 | 7.276017e-57 | 2.660142e-54 |
MsaG011601 | MsaG027046 | 0.835922 | 2.311329e-56 | 7.958942e-54 |
MsaG011601 | MsaG027054 | 0.802727 | 8.221221e-49 | 1.182498e-46 |
MsaG011601 | MsaG027329 | 0.845166 | 9.023598e-59 | 4.157132e-56 |
MsaG011601 | MsaG027464 | 0.811454 | 1.191032e-50 | 2.107533e-48 |
MsaG011601 | MsaG027808 | 0.812847 | 5.936853e-51 | 1.087297e-48 |
MsaG011601 | MsaG027970 | 0.899275 | 5.338205e-77 | 2.618040e-73 |
MsaG011601 | MsaG028553 | 0.831077 | 3.690583e-55 | 1.101540e-52 |
MsaG011601 | MsaG028607 | 0.803654 | 5.297408e-49 | 7.784327e-47 |
MsaG011601 | MsaG028830 | 0.807709 | 7.527906e-50 | 1.216547e-47 |
MsaG011601 | MsaG028931 | 0.835072 | 3.782817e-56 | 1.269854e-53 |
MsaG011601 | MsaG029702 | 0.815573 | 1.494022e-51 | 2.930265e-49 |
MsaG011601 | MsaG029813 | 0.813679 | 3.906040e-51 | 7.304260e-49 |
MsaG011601 | MsaG030080 | 0.827938 | 2.120260e-54 | 5.788151e-52 |
MsaG011601 | MsaG031491 | 0.848939 | 8.445497e-60 | 4.414656e-57 |
MsaG011601 | MsaG033125 | 0.818745 | 2.915116e-52 | 6.203020e-50 |
MsaG011601 | MsaG033966 | 0.809504 | 3.126229e-50 | 5.275490e-48 |
MsaG011601 | MsaG034350 | 0.853492 | 4.435910e-61 | 2.715626e-58 |
MsaG011601 | MsaG034342 | 0.844701 | 1.202587e-58 | 5.456636e-56 |
MsaG011601 | MsaG034529 | 0.872738 | 5.184463e-67 | 6.752388e-64 |
MsaG011601 | MsaG034790 | 0.813680 | 3.904782e-51 | 7.301999e-49 |
MsaG011601 | MsaG034949 | 0.823961 | 1.848208e-53 | 4.519259e-51 |
MsaG011601 | MsaG034999 | 0.804707 | 3.204960e-49 | 4.825899e-47 |
MsaG011601 | MsaG035300 | 0.874137 | 1.762299e-67 | 2.440351e-64 |
MsaG011601 | MsaG035275 | 0.810237 | 2.178016e-50 | 3.741013e-48 |
MsaG011601 | MsaG035323 | 0.812697 | 6.400809e-51 | 1.167916e-48 |
MsaG011601 | MsaG035406 | 0.854195 | 2.788853e-61 | 1.750810e-58 |
MsaG011601 | MsaG035557 | 0.822246 | 4.623254e-53 | 1.079259e-50 |
MsaG011601 | MsaG035558 | 0.848592 | 1.052794e-59 | 5.438407e-57 |
MsaG011601 | MsaG035581 | 0.820685 | 1.055836e-52 | 2.364541e-50 |
MsaG011601 | MsaG035582 | 0.818499 | 3.313377e-52 | 7.005409e-50 |
MsaG011601 | MsaG035567 | 0.845167 | 9.017796e-59 | 4.154590e-56 |
MsaG011601 | MsaG035568 | 0.824599 | 1.310797e-53 | 3.261323e-51 |
MsaG011601 | MsaG035572 | 0.858046 | 2.102877e-62 | 1.518990e-59 |
MsaG011601 | MsaG036128 | 0.835819 | 2.453517e-56 | 8.422426e-54 |
MsaG011601 | MsaG036294 | 0.834961 | 4.033695e-56 | 1.349541e-53 |
MsaG011601 | MsaG036511 | 0.810896 | 1.572205e-50 | 2.744159e-48 |
MsaG011601 | MsaG036529 | 0.856141 | 7.624333e-62 | 5.133951e-59 |
MsaG011601 | MsaG037763 | 0.877023 | 1.828181e-68 | 2.878172e-65 |
MsaG011601 | MsaG038022 | 0.805910 | 1.798802e-49 | 2.785577e-47 |
MsaG011601 | MsaG039176 | 0.813146 | 5.109699e-51 | 9.428153e-49 |
MsaG011601 | MsaG039591 | 0.808194 | 5.943090e-50 | 9.716783e-48 |
MsaG011601 | MsaG040443 | 0.843121 | 3.173468e-58 | 1.367968e-55 |
MsaG011601 | MsaG040755 | 0.803002 | 7.216987e-49 | 1.044670e-46 |
MsaG011601 | MsaG041770 | 0.800609 | 2.225198e-48 | 3.050341e-46 |
MsaG011601 | MsaG041772 | 0.839537 | 2.755857e-57 | 1.060252e-54 |
MsaG011601 | MsaG043103 | 0.802637 | 8.578008e-49 | 1.231333e-46 |
MsaG011601 | MsaG043269 | 0.815630 | 1.451764e-51 | 2.851508e-49 |
MsaG011601 | MsaG043330 | 0.867320 | 3.005787e-65 | 3.118379e-62 |
MsaG011601 | MsaG043344 | 0.812702 | 6.384414e-51 | 1.165078e-48 |
MsaG011601 | MsaG043767 | 0.820582 | 1.114532e-52 | 2.489301e-50 |
MsaG011601 | MsaG044736 | 0.813475 | 4.329110e-51 | 8.054070e-49 |
MsaG011601 | MsaG044793 | 0.838645 | 4.679458e-57 | 1.750990e-54 |
MsaG011601 | MsaG044807 | 0.808857 | 4.296327e-50 | 7.137579e-48 |
MsaG011601 | MsaG044963 | 0.819488 | 1.979161e-52 | 4.294347e-50 |
MsaG011601 | MsaG045111 | 0.845295 | 8.326853e-59 | 3.852615e-56 |
MsaG011601 | MsaG045309 | 0.805940 | 1.773009e-49 | 2.747595e-47 |
MsaG011601 | MsaG045261 | 0.828477 | 1.574815e-54 | 4.364739e-52 |
MsaG011601 | MsaG045283 | 0.837551 | 8.922129e-57 | 3.227543e-54 |
MsaG011601 | MsaG045550 | 0.800286 | 2.587706e-48 | 3.521289e-46 |
MsaG011601 | MsaG045551 | 0.801520 | 1.452350e-48 | 2.032244e-46 |
MsaG011601 | MsaG045766 | 0.840929 | 1.197826e-57 | 4.814531e-55 |
MsaG011601 | MsaG045883 | 0.826649 | 4.304390e-54 | 1.133398e-51 |
MsaG011601 | MsaG046532 | 0.837164 | 1.119408e-56 | 4.001831e-54 |
MsaG011601 | MsaG046425 | 0.845080 | 9.517422e-59 | 4.372778e-56 |
MsaG011601 | MsaG046732 | 0.831572 | 2.791690e-55 | 8.453561e-53 |
MsaG011601 | MsaG002505 | 0.850027 | 4.212410e-60 | 2.285005e-57 |
MsaG011601 | MsaG001553 | 0.830030 | 6.638575e-55 | 1.922967e-52 |
MsaG011601 | MsaG001996 | 0.803433 | 5.881709e-49 | 8.598991e-47 |
MsaG011601 | MsaG004765 | 0.819664 | 1.804408e-52 | 3.933162e-50 |
MsaG011601 | MsaG004834 | 0.837968 | 6.981071e-57 | 2.557898e-54 |
MsaG011601 | MsaG002852 | 0.846126 | 4.968016e-59 | 2.362828e-56 |
MsaG011601 | MsaG003580 | 0.805179 | 2.556711e-49 | 3.892344e-47 |
MsaG011601 | MsaG002499 | 0.846401 | 4.183471e-59 | 2.007915e-56 |
MsaG011601 | MsaG001683 | 0.804181 | 4.119835e-49 | 6.128536e-47 |
MsaG011601 | MsaG002306 | 0.824367 | 1.485114e-53 | 3.671964e-51 |
MsaG011601 | MsaG002567 | 0.805874 | 1.830066e-49 | 2.831633e-47 |
MsaG011601 | MsaG008748 | 0.803611 | 5.406503e-49 | 7.936642e-47 |
MsaG011601 | MsaG006538 | 0.808236 | 5.820774e-50 | 9.526573e-48 |
MsaG011601 | MsaG007187 | 0.817671 | 5.087066e-52 | 1.052796e-49 |
MsaG011601 | MsaG013383 | 0.874205 | 1.672354e-67 | 2.322568e-64 |
MsaG011601 | MsaG013255 | 0.884793 | 3.044769e-71 | 6.902444e-68 |
MsaG011601 | MsaG014174 | 0.829160 | 1.078053e-54 | 3.045723e-52 |
MsaG011601 | MsaG022732 | 0.824711 | 1.233524e-53 | 3.078494e-51 |
MsaG011601 | MsaG025840 | 0.843221 | 2.985915e-58 | 1.291206e-55 |
MsaG011601 | MsaG026810 | 0.816806 | 7.947616e-52 | 1.608587e-49 |
MsaG011601 | MsaG028085 | 0.815604 | 1.470644e-51 | 2.886773e-49 |
MsaG011601 | MsaG026617 | 0.859899 | 5.900691e-63 | 4.569937e-60 |
MsaG011601 | MsaG027119 | 0.839055 | 3.670380e-57 | 1.391157e-54 |
MsaG011601 | MsaG027196 | 0.801966 | 1.177266e-48 | 1.664138e-46 |
MsaG011601 | MsaG026351 | 0.806286 | 1.500318e-49 | 2.344242e-47 |
MsaG011601 | MsaG034300 | 0.845544 | 7.136734e-59 | 3.329261e-56 |
MsaG011601 | MsaG032246 | 0.820899 | 9.434695e-53 | 2.124976e-50 |
MsaG011601 | MsaG034413 | 0.819142 | 2.370144e-52 | 5.096454e-50 |
MsaG011601 | MsaG032719 | 0.801171 | 1.710074e-48 | 2.374056e-46 |
MsaG011601 | MsaG030868 | 0.829044 | 1.149972e-54 | 3.238289e-52 |
MsaG011601 | MsaG034266 | 0.864787 | 1.887722e-64 | 1.768386e-61 |
MsaG011601 | MsaG031897 | 0.875502 | 6.078482e-68 | 8.938242e-65 |
MsaG011601 | MsaG037043 | 0.809211 | 3.611982e-50 | 6.051593e-48 |
MsaG011601 | MsaG036465 | 0.800970 | 1.879732e-48 | 2.597692e-46 |
MsaG011601 | MsaG037075 | 0.861622 | 1.780232e-63 | 1.472278e-60 |
MsaG011601 | MsaG037387 | 0.848361 | 1.218600e-59 | 6.245566e-57 |
MsaG011601 | MsaG036923 | 0.826034 | 6.021375e-54 | 1.558688e-51 |
MsaG011601 | MsaG036656 | 0.800888 | 1.953021e-48 | 2.694012e-46 |
MsaG011601 | MsaG041203 | 0.821491 | 6.900098e-53 | 1.578680e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG011601 | MtrunA17_Chr3g0077461 | 86.344 | 454 | 52 | 4 | 34 | 484 | 22 | 468 | 0.0 | 799 |
MsaG011601 | MtrunA17_Chr3g0077461 | 50.633 | 237 | 104 | 4 | 14 | 240 | 232 | 465 | 3.23e-66 | 220 |
MsaG011601 | MtrunA17_Chr3g0077411 | 67.704 | 514 | 132 | 8 | 1 | 481 | 1 | 513 | 0.0 | 662 |
MsaG011601 | MtrunA17_Chr3g0077361 | 57.895 | 513 | 149 | 9 | 1 | 481 | 20 | 497 | 0.0 | 540 |
MsaG011601 | MtrunA17_Chr4g0009491 | 60.849 | 424 | 139 | 5 | 33 | 439 | 11 | 424 | 3.61e-174 | 496 |
MsaG011601 | MtrunA17_Chr4g0009491 | 54.146 | 205 | 71 | 2 | 14 | 195 | 220 | 424 | 4.19e-64 | 214 |
MsaG011601 | MtrunA17_Chr4g0009491 | 47.980 | 198 | 93 | 4 | 270 | 464 | 11 | 201 | 3.87e-51 | 179 |
MsaG011601 | MtrunA17_Chr3g0077381 | 60.000 | 430 | 123 | 6 | 33 | 438 | 34 | 438 | 1.33e-166 | 478 |
MsaG011601 | MtrunA17_Chr3g0077381 | 52.941 | 204 | 68 | 2 | 14 | 195 | 242 | 439 | 5.67e-60 | 203 |
MsaG011601 | MtrunA17_Chr3g0077381 | 45.327 | 214 | 89 | 4 | 270 | 482 | 34 | 220 | 4.17e-48 | 171 |
MsaG011601 | MtrunA17_Chr5g0429931 | 55.372 | 242 | 84 | 3 | 29 | 247 | 5 | 245 | 4.50e-80 | 249 |
MsaG011601 | MtrunA17_Chr5g0429931 | 53.419 | 234 | 91 | 4 | 266 | 481 | 5 | 238 | 2.87e-75 | 237 |
MsaG011601 | MtrunA17_Chr3g0077451 | 57.466 | 221 | 85 | 4 | 270 | 481 | 10 | 230 | 6.47e-79 | 246 |
MsaG011601 | MtrunA17_Chr3g0077451 | 56.769 | 229 | 84 | 4 | 33 | 247 | 10 | 237 | 4.14e-75 | 236 |
MsaG011601 | MtrunA17_Chr3g0077431 | 54.974 | 191 | 77 | 4 | 300 | 481 | 1 | 191 | 1.58e-61 | 199 |
MsaG011601 | MtrunA17_Chr3g0077431 | 54.271 | 199 | 76 | 4 | 63 | 247 | 1 | 198 | 3.80e-57 | 188 |
MsaG011601 | MtrunA17_Chr3g0077421 | 52.083 | 192 | 82 | 4 | 300 | 481 | 1 | 192 | 4.32e-57 | 188 |
MsaG011601 | MtrunA17_Chr3g0077421 | 52.217 | 203 | 81 | 4 | 63 | 250 | 1 | 202 | 1.85e-54 | 181 |
MsaG011601 | MtrunA17_Chr3g0077441 | 52.083 | 192 | 82 | 4 | 300 | 481 | 1 | 192 | 4.32e-57 | 188 |
MsaG011601 | MtrunA17_Chr3g0077441 | 52.217 | 203 | 81 | 4 | 63 | 250 | 1 | 202 | 1.85e-54 | 181 |
MsaG011601 | MtrunA17_Chr3g0131891 | 30.389 | 283 | 142 | 10 | 255 | 482 | 18 | 300 | 2.87e-26 | 108 |
MsaG011601 | MtrunA17_Chr3g0131891 | 28.763 | 299 | 150 | 11 | 12 | 249 | 12 | 308 | 1.68e-20 | 92.4 |
MsaG011601 | MtrunA17_Chr1g0162441 | 46.465 | 99 | 53 | 0 | 256 | 354 | 7 | 105 | 2.70e-25 | 107 |
MsaG011601 | MtrunA17_Chr1g0162441 | 42.202 | 109 | 62 | 1 | 19 | 126 | 7 | 115 | 1.30e-22 | 100 |
MsaG011601 | MtrunA17_Chr8g0390841 | 26.190 | 294 | 144 | 8 | 256 | 481 | 39 | 327 | 1.47e-21 | 97.8 |
MsaG011601 | MtrunA17_Chr8g0390841 | 22.880 | 507 | 284 | 17 | 33 | 479 | 53 | 512 | 5.80e-19 | 89.7 |
MsaG011601 | MtrunA17_Chr4g0033961 | 41.176 | 102 | 60 | 0 | 253 | 354 | 3 | 104 | 2.96e-21 | 95.9 |
MsaG011601 | MtrunA17_Chr4g0033961 | 37.607 | 117 | 68 | 1 | 9 | 125 | 1 | 112 | 4.58e-20 | 92.4 |
MsaG011601 | MtrunA17_Chr5g0419201 | 36.364 | 121 | 76 | 1 | 19 | 138 | 16 | 136 | 1.01e-19 | 87.0 |
MsaG011601 | MtrunA17_Chr5g0419201 | 34.127 | 126 | 82 | 1 | 242 | 366 | 2 | 127 | 6.59e-19 | 84.7 |
MsaG011601 | MtrunA17_Chr1g0162411 | 39.806 | 103 | 62 | 0 | 256 | 358 | 7 | 109 | 2.13e-19 | 90.5 |
MsaG011601 | MtrunA17_Chr1g0162411 | 41.667 | 108 | 62 | 1 | 19 | 126 | 7 | 113 | 2.48e-18 | 87.4 |
MsaG011601 | MtrunA17_Chr7g0233561 | 35.294 | 136 | 80 | 2 | 18 | 145 | 17 | 152 | 4.62e-19 | 88.2 |
MsaG011601 | MtrunA17_Chr7g0233561 | 25.086 | 291 | 151 | 7 | 249 | 472 | 9 | 299 | 1.85e-18 | 86.3 |
MsaG011601 | MtrunA17_Chr3g0103171 | 27.273 | 253 | 130 | 7 | 34 | 233 | 5 | 256 | 1.45e-18 | 85.5 |
MsaG011601 | MtrunA17_Chr3g0103171 | 39.286 | 84 | 51 | 0 | 271 | 354 | 5 | 88 | 1.00e-14 | 74.3 |
MsaG011601 | MtrunA17_Chr3g0103181 | 42.574 | 101 | 56 | 1 | 18 | 118 | 11 | 109 | 1.67e-18 | 85.5 |
MsaG011601 | MtrunA17_Chr3g0103181 | 27.473 | 273 | 147 | 9 | 255 | 482 | 11 | 277 | 6.33e-17 | 80.9 |
MsaG011601 | MtrunA17_Chr1g0163071 | 26.389 | 288 | 128 | 8 | 272 | 481 | 2 | 283 | 1.78e-18 | 86.3 |
MsaG011601 | MtrunA17_Chr1g0163071 | 24.916 | 297 | 131 | 8 | 35 | 247 | 2 | 290 | 1.64e-15 | 77.4 |
MsaG011601 | MtrunA17_Chr7g0233571 | 33.600 | 125 | 83 | 0 | 255 | 379 | 9 | 133 | 5.92e-18 | 82.8 |
MsaG011601 | MtrunA17_Chr7g0233571 | 37.000 | 100 | 63 | 0 | 18 | 117 | 9 | 108 | 3.59e-17 | 80.5 |
MsaG011601 | MtrunA17_Chr3g0103151 | 41.000 | 100 | 57 | 1 | 18 | 117 | 11 | 108 | 8.51e-18 | 80.5 |
MsaG011601 | MtrunA17_Chr3g0103151 | 32.192 | 146 | 91 | 3 | 255 | 399 | 11 | 149 | 7.40e-16 | 75.1 |
MsaG011601 | MtrunA17_Chr7g0233531 | 29.200 | 250 | 127 | 8 | 272 | 472 | 2 | 250 | 2.26e-17 | 82.4 |
MsaG011601 | MtrunA17_Chr7g0233531 | 36.145 | 83 | 53 | 0 | 35 | 117 | 2 | 84 | 5.47e-14 | 72.4 |
MsaG011601 | MtrunA17_Chr7g0233541 | 35.433 | 127 | 73 | 4 | 35 | 153 | 2 | 127 | 1.78e-16 | 80.1 |
MsaG011601 | MtrunA17_Chr7g0233541 | 25.564 | 266 | 133 | 6 | 272 | 472 | 2 | 267 | 2.13e-15 | 76.6 |
MsaG011601 | MtrunA17_Chr7g0233521 | 38.372 | 86 | 53 | 0 | 35 | 120 | 2 | 87 | 3.18e-16 | 79.0 |
MsaG011601 | MtrunA17_Chr7g0233521 | 35.052 | 97 | 63 | 0 | 272 | 368 | 2 | 98 | 2.41e-14 | 73.6 |
MsaG011601 | MtrunA17_Chr3g0103191 | 40.000 | 100 | 58 | 1 | 19 | 118 | 12 | 109 | 5.59e-16 | 77.8 |
MsaG011601 | MtrunA17_Chr3g0103191 | 39.394 | 99 | 58 | 1 | 256 | 354 | 12 | 108 | 3.85e-14 | 72.4 |
MsaG011601 | MtrunA17_Chr6g0467351 | 36.434 | 129 | 73 | 3 | 255 | 377 | 14 | 139 | 2.74e-15 | 75.1 |
MsaG011601 | MtrunA17_Chr1g0163101 | 27.097 | 155 | 109 | 3 | 240 | 393 | 1 | 152 | 1.18e-14 | 72.4 |
MsaG011601 | MtrunA17_Chr1g0163131 | 33.043 | 115 | 74 | 2 | 255 | 369 | 17 | 128 | 2.28e-14 | 73.9 |
MsaG011601 | MtrunA17_Chr1g0162421 | 44.828 | 58 | 32 | 0 | 33 | 90 | 7 | 64 | 5.57e-14 | 66.6 |
MsaG011601 | MtrunA17_Chr1g0162421 | 43.103 | 58 | 33 | 0 | 270 | 327 | 7 | 64 | 1.36e-12 | 62.8 |
MsaG011601 | MtrunA17_Chr6g0476181 | 33.898 | 118 | 67 | 3 | 272 | 381 | 2 | 116 | 7.33e-14 | 69.3 |
MsaG011601 | MtrunA17_Chr1g0208771 | 26.007 | 273 | 124 | 9 | 271 | 472 | 12 | 277 | 7.90e-14 | 73.6 |
MsaG011601 | MtrunA17_Chr1g0208771 | 34.524 | 84 | 55 | 0 | 34 | 117 | 12 | 95 | 3.17e-12 | 68.6 |
MsaG011601 | MtrunA17_Chr1g0154131 | 26.715 | 277 | 144 | 8 | 267 | 484 | 193 | 469 | 1.48e-13 | 72.8 |
MsaG011601 | MtrunA17_Chr1g0163221 | 36.275 | 102 | 64 | 1 | 255 | 355 | 10 | 111 | 2.03e-13 | 71.6 |
MsaG011601 | MtrunA17_Chr1g0154071 | 33.051 | 118 | 69 | 2 | 255 | 363 | 27 | 143 | 3.31e-13 | 71.6 |
MsaG011601 | MtrunA17_Chr1g0171611 | 25.556 | 270 | 146 | 9 | 250 | 477 | 3 | 259 | 8.40e-13 | 68.9 |
MsaG011601 | MtrunA17_Chr1g0154161 | 24.042 | 287 | 160 | 9 | 242 | 472 | 12 | 296 | 3.47e-12 | 67.4 |
MsaG011601 | MtrunA17_Chr1g0163061 | 35.577 | 104 | 66 | 1 | 255 | 357 | 14 | 117 | 4.66e-12 | 66.6 |
MsaG011601 | MtrunA17_Chr1g0163141 | 37.931 | 87 | 51 | 2 | 268 | 354 | 7 | 90 | 1.89e-11 | 63.2 |
MsaG011601 | MtrunA17_Chr4g0067431 | 34.783 | 115 | 68 | 2 | 255 | 368 | 14 | 122 | 2.54e-11 | 64.7 |
MsaG011601 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 56 | 2 | 255 | 346 | 183 | 272 | 2.84e-11 | 66.2 |
MsaG011601 | MtrunA17_Chr1g0163191 | 31.858 | 113 | 65 | 2 | 31 | 143 | 17 | 117 | 3.01e-11 | 62.0 |
MsaG011601 | MtrunA17_Chr1g0154111 | 32.407 | 108 | 69 | 1 | 243 | 346 | 9 | 116 | 3.64e-11 | 65.5 |
MsaG011601 | MtrunA17_Chr1g0154111 | 27.322 | 183 | 111 | 5 | 160 | 340 | 275 | 437 | 6.71e-11 | 64.7 |
MsaG011601 | MtrunA17_Chr1g0162161 | 35.417 | 96 | 57 | 3 | 272 | 367 | 4 | 94 | 9.99e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG011601 | AT3G18960.2 | 39.167 | 120 | 73 | 0 | 237 | 356 | 11 | 130 | 5.57e-23 | 96.7 |
MsaG011601 | AT3G18960.2 | 35.714 | 112 | 72 | 0 | 6 | 117 | 17 | 128 | 7.05e-18 | 82.4 |
MsaG011601 | AT3G18960.1 | 39.167 | 120 | 73 | 0 | 237 | 356 | 11 | 130 | 7.42e-23 | 96.7 |
MsaG011601 | AT3G18960.1 | 35.714 | 112 | 72 | 0 | 6 | 117 | 17 | 128 | 1.36e-17 | 81.6 |
MsaG011601 | AT4G01580.1 | 42.718 | 103 | 59 | 0 | 254 | 356 | 28 | 130 | 1.80e-22 | 95.1 |
MsaG011601 | AT4G01580.1 | 35.714 | 112 | 72 | 0 | 6 | 117 | 17 | 128 | 1.28e-17 | 81.3 |
MsaG011601 | AT3G18990.1 | 34.940 | 166 | 96 | 4 | 256 | 419 | 6 | 161 | 1.77e-21 | 95.9 |
MsaG011601 | AT3G18990.1 | 40.404 | 99 | 59 | 0 | 19 | 117 | 6 | 104 | 1.28e-19 | 90.5 |
MsaG011601 | AT3G18990.2 | 34.940 | 166 | 96 | 4 | 256 | 419 | 6 | 161 | 3.15e-21 | 95.5 |
MsaG011601 | AT3G18990.2 | 40.404 | 99 | 59 | 0 | 19 | 117 | 6 | 104 | 2.27e-19 | 90.1 |
MsaG011601 | AT1G49475.1 | 36.429 | 140 | 87 | 2 | 226 | 364 | 3 | 141 | 1.03e-19 | 87.4 |
MsaG011601 | AT1G49475.1 | 37.398 | 123 | 76 | 1 | 5 | 127 | 20 | 141 | 5.81e-18 | 82.4 |
MsaG011601 | AT3G18960.3 | 41.860 | 86 | 50 | 0 | 271 | 356 | 8 | 93 | 1.87e-17 | 80.5 |
MsaG011601 | AT3G18960.3 | 36.047 | 86 | 55 | 0 | 32 | 117 | 6 | 91 | 3.75e-13 | 68.2 |
MsaG011601 | AT1G26680.4 | 22.868 | 516 | 326 | 22 | 18 | 472 | 14 | 518 | 1.47e-13 | 73.9 |
MsaG011601 | AT1G26680.1 | 22.868 | 516 | 326 | 22 | 18 | 472 | 14 | 518 | 2.10e-13 | 73.2 |
MsaG011601 | AT1G26680.6 | 23.846 | 390 | 248 | 17 | 18 | 379 | 14 | 382 | 8.46e-12 | 68.2 |
MsaG011601 | AT1G26680.5 | 23.846 | 390 | 248 | 17 | 18 | 379 | 14 | 382 | 9.25e-12 | 68.2 |
MsaG011601 | AT4G31690.1 | 26.383 | 235 | 160 | 6 | 254 | 481 | 12 | 240 | 2.98e-11 | 64.7 |
MsaG011601 | AT2G24645.2 | 23.174 | 397 | 271 | 15 | 16 | 391 | 3 | 386 | 6.81e-11 | 64.7 |
Find 102 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGCTCTCCATTGCAATTT+TGG | 0.125157 | 3:+7696304 | None:intergenic |
ACTGCTTTCCTTGAGAATTT+TGG | 0.150373 | 3:+7697519 | None:intergenic |
GAATACTATTCTATTTATTA+TGG | 0.217855 | 3:-7697911 | MsaT011601.1:CDS |
TGATGGTCTTACTTGGAAAT+TGG | 0.227158 | 3:-7696787 | MsaT011601.1:CDS |
GATGAGTTTATAACAAAGTT+TGG | 0.234477 | 3:-7698049 | MsaT011601.1:CDS |
GGCAGCATCCTTTGATCTTT+TGG | 0.235120 | 3:+7697748 | None:intergenic |
TATGGCCTTCTTAAAATGTT+TGG | 0.280661 | 3:+7696992 | None:intergenic |
TACTATTTGTTTGTCATGAA+TGG | 0.295878 | 3:+7696959 | None:intergenic |
TATGGCTTTCATAAAATGTT+TGG | 0.299040 | 3:+7699126 | None:intergenic |
CACCACAGTACTATGCTTAT+AGG | 0.300478 | 3:+7696464 | None:intergenic |
CGATGGTCGTGAGTGGGATA+TGG | 0.308591 | 3:-7697990 | MsaT011601.1:CDS |
AACATTGTTATAAAATCTTC+AGG | 0.326094 | 3:+7696849 | None:intergenic |
TTCAAAACTCCGAGGACTAA+TGG | 0.352679 | 3:-7697803 | MsaT011601.1:CDS |
TGCACATCCGCCAAAGGCTT+TGG | 0.356051 | 3:+7697691 | None:intergenic |
TCCATTGTGTAGTATGTTCC+TGG | 0.362474 | 3:-7697587 | MsaT011601.1:intron |
ATGAGTTTATAACAAAGTTT+GGG | 0.374815 | 3:-7698048 | MsaT011601.1:CDS |
ATGAATGGGCGAGGGAAGTA+TGG | 0.376143 | 3:+7696974 | None:intergenic |
CTCAAAACTCCAAGTACTAA+TGG | 0.380211 | 3:-7696600 | MsaT011601.1:CDS |
CTGTACCTGATGGTCTTACT+TGG | 0.380651 | 3:-7696794 | MsaT011601.1:CDS |
AACTTTGTTATAAACTCATC+TGG | 0.392394 | 3:+7698052 | None:intergenic |
ACGGACAACAATTTGTTAAA+CGG | 0.394532 | 3:-7696213 | MsaT011601.1:CDS |
GTGCTCGGACACTTTATGTT+TGG | 0.397057 | 3:+7697776 | None:intergenic |
ATGATCTGGAGGAGGAAGTA+TGG | 0.403287 | 3:+7699108 | None:intergenic |
ACTATTTGTTTGTCATGAAT+GGG | 0.410462 | 3:+7696960 | None:intergenic |
GATGTTTGTTGTACACGTTT+AGG | 0.414968 | 3:-7696279 | MsaT011601.1:CDS |
TGCAGGCGGAGAAGGAAGTT+AGG | 0.415021 | 3:-7697019 | MsaT011601.1:intron |
GGTCGTTCAGGACTGCGATT+GGG | 0.421540 | 3:-7696258 | MsaT011601.1:CDS |
TGTACACGTTTAGGTCGTTC+AGG | 0.427447 | 3:-7696270 | MsaT011601.1:CDS |
TATTTAGATTTCAAGTATGA+AGG | 0.439885 | 3:-7697884 | MsaT011601.1:CDS |
TCCCTTCATATTCGAAAGAC+AGG | 0.440227 | 3:+7696679 | None:intergenic |
TGGAGCATGAACGGAACATA+TGG | 0.440567 | 3:+7697539 | None:intergenic |
TTTGTTTCTCCATTAGTACT+TGG | 0.446615 | 3:+7696591 | None:intergenic |
AAATGTTTGGAATCTTTCTC+CGG | 0.452857 | 3:+7699139 | None:intergenic |
AATTTCCAAGTAAGACCATC+AGG | 0.471155 | 3:+7696789 | None:intergenic |
TCTGTTCCTTGATCCTCACT+TGG | 0.472253 | 3:+7696507 | None:intergenic |
CAATACTATTCTTTAAGATA+CGG | 0.474788 | 3:-7696708 | MsaT011601.1:CDS |
GTAACTTGTAACACAGCAAC+AGG | 0.476992 | 3:+7697365 | None:intergenic |
CGACGAAGTTGTAACACAAC+TGG | 0.478088 | 3:+7696156 | None:intergenic |
AAATTGCAATGGAGAGCAAT+GGG | 0.490520 | 3:-7696301 | MsaT011601.1:CDS |
TATTGAATTGCAGGCGGAGA+AGG | 0.498005 | 3:-7697027 | MsaT011601.1:intron |
AGCATAATTGATTTCAACCC+TGG | 0.498720 | 3:+7696539 | None:intergenic |
TATAGGTAGAAGTAAAAGAA+GGG | 0.498835 | 3:+7696481 | None:intergenic |
CAAGGCCTAGGAAAAGGTCC+AGG | 0.503244 | 3:-7696557 | MsaT011601.1:CDS |
AGTGTCCAAGGCCTAGGAAA+AGG | 0.504716 | 3:-7696563 | MsaT011601.1:CDS |
TTATAGGTAGAAGTAAAAGA+AGG | 0.509475 | 3:+7696480 | None:intergenic |
AGGTCGTTCAGGACTGCGAT+TGG | 0.510218 | 3:-7696259 | MsaT011601.1:CDS |
TTTCGTTCCAAAGCCTTTGG+CGG | 0.513757 | 3:-7697698 | MsaT011601.1:CDS |
TTTGGTTCTCCATTAGTCCT+CGG | 0.518425 | 3:+7697794 | None:intergenic |
TTCCTGTCTTTCGAATATGA+AGG | 0.519724 | 3:-7696681 | MsaT011601.1:CDS |
ATATCCCACTCACGACCATC+GGG | 0.524249 | 3:+7697992 | None:intergenic |
TTGGAATCTTTCTCCGGCGA+CGG | 0.524958 | 3:+7699145 | None:intergenic |
ATTTAGATTTCAAGTATGAA+GGG | 0.527803 | 3:-7697883 | MsaT011601.1:CDS |
GCAGGCGGAGAAGGAAGTTA+GGG | 0.528822 | 3:-7697018 | MsaT011601.1:intron |
CATATCCCACTCACGACCAT+CGG | 0.533925 | 3:+7697991 | None:intergenic |
AGATCAAAGGATGCTGCCAA+TGG | 0.538359 | 3:-7697743 | MsaT011601.1:CDS |
TCCTGTCTTTCGAATATGAA+GGG | 0.540870 | 3:-7696680 | MsaT011601.1:CDS |
ACACGGAGTGTCCAAGGCCT+AGG | 0.542974 | 3:-7696569 | MsaT011601.1:CDS |
GAGAAGATATGTTCCGTCGC+CGG | 0.544889 | 3:-7699158 | MsaT011601.1:CDS |
GTGGATTCTGTAGATTTGCA+AGG | 0.544893 | 3:-7697442 | MsaT011601.1:CDS |
AAAATTGCAATGGAGAGCAA+TGG | 0.546760 | 3:-7696302 | MsaT011601.1:CDS |
TTGTTTGTCATGAATGGGCG+AGG | 0.546897 | 3:+7696965 | None:intergenic |
TCAGGACTGCGATTGGGGAA+AGG | 0.546910 | 3:-7696252 | MsaT011601.1:CDS |
GTTAAACGGTGATAAATGCA+AGG | 0.548716 | 3:-7696199 | MsaT011601.1:CDS |
AGGATTCTTTAAATTTGCAA+CGG | 0.549729 | 3:-7696232 | MsaT011601.1:CDS |
AAGGCTTTGGAACGAAAACA+AGG | 0.561637 | 3:+7697704 | None:intergenic |
ACAAGTTACTGCGTCTCGCA+CGG | 0.562350 | 3:-7697351 | MsaT011601.1:intron |
AAATTGGAATTGAAGAAACG+TGG | 0.566955 | 3:-7696771 | MsaT011601.1:CDS |
GCGACGGAACATATCTTCTC+CGG | 0.567057 | 3:+7699161 | None:intergenic |
CACTGCTTCCAAAAGATCAA+AGG | 0.568858 | 3:-7697756 | MsaT011601.1:CDS |
AAACAAACACGGAGTGTCCA+AGG | 0.572497 | 3:-7696575 | MsaT011601.1:CDS |
TGTTCCTGGTGAATTTGCTA+AGG | 0.578362 | 3:-7697573 | MsaT011601.1:CDS |
GTCGTTCAGGACTGCGATTG+GGG | 0.586295 | 3:-7696257 | MsaT011601.1:CDS |
TCTTACTGCACATCCGCCAA+AGG | 0.591238 | 3:+7697685 | None:intergenic |
AAGGGAAAACAATCTATCAA+AGG | 0.593937 | 3:-7697423 | MsaT011601.1:CDS |
AATTGGAATTGAAGAAACGT+GGG | 0.594882 | 3:-7696770 | MsaT011601.1:CDS |
AAAATTCTCAAGGAAAGCAG+TGG | 0.599450 | 3:-7697517 | MsaT011601.1:CDS |
TGGATTCTGTAGATTTGCAA+GGG | 0.600149 | 3:-7697441 | MsaT011601.1:CDS |
TGCTGATGATTCACCAAGTG+AGG | 0.601710 | 3:-7696520 | MsaT011601.1:CDS |
ACAACTTTGAGCTGATCAAG+AGG | 0.603297 | 3:-7697391 | MsaT011601.1:CDS |
GATTCACCAAGTGAGGATCA+AGG | 0.604229 | 3:-7696513 | MsaT011601.1:CDS |
TTCATGCTCCAAAATTCTCA+AGG | 0.607610 | 3:-7697527 | MsaT011601.1:CDS |
GCTACCATTACTATTCCCGA+TGG | 0.609181 | 3:-7698007 | MsaT011601.1:CDS |
AATCCACTCGTAATTCGCAT+TGG | 0.611373 | 3:+7697458 | None:intergenic |
AAGAAACAATGAAGACTCAC+CGG | 0.615286 | 3:-7699180 | None:intergenic |
TATTCCCGATGGTCGTGAGT+GGG | 0.627663 | 3:-7697996 | MsaT011601.1:CDS |
TGCTCCTTAGCAAATTCACC+AGG | 0.628603 | 3:+7697569 | None:intergenic |
CTATTCCCGATGGTCGTGAG+TGG | 0.632144 | 3:-7697997 | MsaT011601.1:CDS |
ACGACCATCGGGAATAGTAA+TGG | 0.633705 | 3:+7698003 | None:intergenic |
AAATTCTCAAGGAAAGCAGT+GGG | 0.637805 | 3:-7697516 | MsaT011601.1:CDS |
CTTATTCATTCAAAACTCCG+AGG | 0.640841 | 3:-7697811 | MsaT011601.1:CDS |
ACACCAATGCGAATTACGAG+TGG | 0.647816 | 3:-7697461 | MsaT011601.1:CDS |
GTGAAGCTCCAAAATTGCAA+TGG | 0.649737 | 3:-7696312 | MsaT011601.1:CDS |
TGTTTGTCATGAATGGGCGA+GGG | 0.652999 | 3:+7696966 | None:intergenic |
AGGCTTTGGAACGAAAACAA+GGG | 0.659531 | 3:+7697705 | None:intergenic |
GCTACAGTTACTGTACCTGA+TGG | 0.662981 | 3:-7696804 | MsaT011601.1:CDS |
GGAATTGAAGAAACGTGGGG+AGG | 0.674047 | 3:-7696766 | MsaT011601.1:CDS |
AAGGCCTAGGAAAAGGTCCA+GGG | 0.684915 | 3:-7696556 | MsaT011601.1:CDS |
ATGGAACTGAAGAAATGTGG+CGG | 0.686123 | 3:-7697971 | MsaT011601.1:CDS |
TACCTATAAGCATAGTACTG+TGG | 0.687770 | 3:-7696466 | MsaT011601.1:intron |
GATATGGAACTGAAGAAATG+TGG | 0.697083 | 3:-7697974 | MsaT011601.1:CDS |
TACTAATGGAGAAACAAACA+CGG | 0.702116 | 3:-7696586 | MsaT011601.1:CDS |
ATTGGAATTGAAGAAACGTG+GGG | 0.725338 | 3:-7696769 | MsaT011601.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 7696149 | 7699194 | 7696149 | ID=MsaG011601 |
Chr3 | mRNA | 7696149 | 7699194 | 7696149 | ID=MsaT011601.1;Parent=MsaG011601 |
Chr3 | exon | 7696149 | 7696382 | 7696149 | ID=MsaT011601.1.exon6;Parent=MsaT011601.1 |
Chr3 | CDS | 7696149 | 7696382 | 7696149 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Chr3 | exon | 7696467 | 7696877 | 7696467 | ID=MsaT011601.1.exon5;Parent=MsaT011601.1 |
Chr3 | CDS | 7696467 | 7696877 | 7696467 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Chr3 | exon | 7696962 | 7697036 | 7696962 | ID=MsaT011601.1.exon4;Parent=MsaT011601.1 |
Chr3 | CDS | 7696962 | 7697036 | 7696962 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Chr3 | exon | 7697352 | 7697597 | 7697352 | ID=MsaT011601.1.exon3;Parent=MsaT011601.1 |
Chr3 | CDS | 7697352 | 7697597 | 7697352 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Chr3 | exon | 7697691 | 7698080 | 7697691 | ID=MsaT011601.1.exon2;Parent=MsaT011601.1 |
Chr3 | CDS | 7697691 | 7698080 | 7697691 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Chr3 | exon | 7699096 | 7699194 | 7699096 | ID=MsaT011601.1.exon1;Parent=MsaT011601.1 |
Chr3 | CDS | 7699096 | 7699194 | 7699096 | ID=cds.MsaT011601.1;Parent=MsaT011601.1 |
Gene Sequence |
Protein sequence |