AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG012199

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012199 MtrunA17_Chr3g0080101 98.504 802 12 0 1 802 1 802 0.0 1630
MsaG012199 MtrunA17_Chr7g0266031 50.454 882 351 19 1 802 1 876 0.0 738
MsaG012199 MtrunA17_Chr1g0179101 69.247 465 135 5 342 802 399 859 0.0 662
MsaG012199 MtrunA17_Chr2g0290691 58.439 474 183 6 342 802 132 604 0.0 569
MsaG012199 MtrunA17_Chr7g0250631 63.038 395 132 5 379 769 331 715 5.20e-179 532
MsaG012199 MtrunA17_Chr7g0227331 61.253 431 158 5 345 769 163 590 7.00e-178 525
MsaG012199 MtrunA17_Chr6g0449401 54.752 484 160 8 337 769 176 651 1.13e-175 521
MsaG012199 MtrunA17_Chr8g0335351 63.868 393 129 5 379 767 337 720 4.43e-175 523
MsaG012199 MtrunA17_Chr2g0309421 56.849 438 167 7 357 787 118 540 3.95e-160 477
MsaG012199 MtrunA17_Chr8g0356291 53.333 435 170 8 390 802 101 524 1.86e-153 458
MsaG012199 MtrunA17_Chr4g0063311 50.877 399 175 8 387 768 63 457 7.82e-135 409
MsaG012199 MtrunA17_Chr2g0321101 53.316 377 151 6 398 761 70 434 7.21e-130 395
MsaG012199 MtrunA17_Chr8g0381091 49.367 395 161 10 390 768 52 423 7.69e-121 372
MsaG012199 MtrunA17_Chr2g0285711 47.980 396 168 9 390 771 57 428 3.12e-120 370
MsaG012199 MtrunA17_Chr2g0312641 45.763 413 177 10 370 767 39 419 5.00e-114 355
MsaG012199 MtrunA17_Chr2g0327561 46.296 378 164 2 390 767 601 939 7.61e-108 352
MsaG012199 MtrunA17_Chr4g0030361 44.444 378 160 3 390 767 282 609 3.25e-105 337
MsaG012199 MtrunA17_Chr8g0369091 44.974 378 161 3 390 767 572 902 5.49e-104 342
MsaG012199 MtrunA17_Chr4g0032761 37.811 402 212 11 412 792 10 394 1.00e-75 252
MsaG012199 MtrunA17_Chr2g0329011 38.420 367 185 7 411 774 11 339 4.32e-75 249
MsaG012199 MtrunA17_Chr8g0338741 38.315 368 195 11 412 768 15 361 1.87e-70 238
MsaG012199 MtrunA17_Chr7g0234641 35.657 373 206 9 409 769 3 353 2.24e-67 229
MsaG012199 MtrunA17_Chr5g0428981 34.302 344 178 5 414 756 760 1056 1.88e-55 207
MsaG012199 MtrunA17_Chr4g0018201 34.012 344 179 5 414 756 756 1052 3.24e-55 206
MsaG012199 MtrunA17_Chr6g0478601 35.191 341 174 6 417 756 111 405 3.35e-54 196
MsaG012199 MtrunA17_Chr3g0135951 32.081 346 196 9 417 756 94 406 1.66e-46 174
MsaG012199 MtrunA17_Chr1g0153321 29.805 359 210 7 405 759 96 416 2.38e-44 167
MsaG012199 MtrunA17_Chr1g0187581 30.637 408 221 13 369 767 81 435 1.22e-41 160
MsaG012199 MtrunA17_Chr1g0183651 29.459 370 221 6 405 772 108 439 4.96e-41 159
MsaG012199 MtrunA17_Chr2g0299781 30.814 344 203 8 417 756 113 425 1.71e-40 156
MsaG012199 MtrunA17_Chr1g0167351 27.409 467 287 11 320 772 3 431 1.87e-40 157
MsaG012199 MtrunA17_Chr7g0261491 30.000 360 204 9 405 756 108 427 1.47e-39 154
MsaG012199 MtrunA17_Chr1g0167311 29.189 370 223 9 405 772 103 435 3.01e-39 153
MsaG012199 MtrunA17_Chr1g0197721 37.791 172 97 3 401 572 38 199 9.25e-28 118
MsaG012199 MtrunA17_Chr1g0197721 35.099 151 92 3 638 784 203 351 1.64e-13 73.9
MsaG012199 MtrunA17_Chr7g0245031 37.500 168 95 4 404 564 129 293 1.65e-26 114
MsaG012199 MtrunA17_Chr7g0245031 45.238 126 64 3 647 771 301 422 2.27e-23 104
MsaG012199 MtrunA17_Chr4g0059751 39.241 158 81 5 417 564 89 241 4.22e-26 112
MsaG012199 MtrunA17_Chr4g0059751 40.000 140 73 4 647 785 249 378 1.79e-23 103
MsaG012199 MtrunA17_Chr3g0125381 44.144 111 58 1 642 752 101 207 2.14e-24 102
MsaG012199 MtrunA17_Chr3g0125381 32.231 121 69 2 467 587 2 109 1.35e-11 65.1
MsaG012199 MtrunA17_Chr8g0351491 27.666 347 168 9 406 752 5 268 1.59e-22 98.6
MsaG012199 MtrunA17_Chr3g0140631 32.955 176 116 1 390 565 10 183 6.15e-21 94.4
MsaG012199 MtrunA17_Chr8g0379091 25.784 287 137 5 411 696 20 231 1.38e-19 93.2
MsaG012199 MtrunA17_Chr2g0284031 25.784 287 137 5 406 691 20 231 4.71e-19 91.7
MsaG012199 MtrunA17_Chr1g0205421 35.625 160 96 3 407 564 2 156 9.85e-19 90.1
MsaG012199 MtrunA17_Chr4g0013131 30.380 158 107 1 407 564 2 156 1.65e-18 89.4
MsaG012199 MtrunA17_Chr8g0353621 41.346 104 57 1 647 750 161 260 6.67e-18 84.7
MsaG012199 MtrunA17_Chr8g0353621 33.333 150 98 1 417 566 10 157 1.17e-17 84.0
MsaG012199 MtrunA17_Chr3g0107011 30.519 154 104 1 411 564 8 158 1.03e-17 87.0
MsaG012199 MtrunA17_Chr3g0114511 32.258 155 100 1 410 564 25 174 2.16e-17 85.9
MsaG012199 MtrunA17_Chr7g0244521 30.968 155 104 1 410 564 5 156 4.08e-17 85.1
MsaG012199 MtrunA17_Chr2g0286501 35.065 154 90 3 414 566 46 190 2.37e-16 84.0
MsaG012199 MtrunA17_Chr2g0304111 31.081 148 100 1 417 564 23 168 4.10e-16 82.0
MsaG012199 MtrunA17_Chr3g0107051 33.108 148 96 1 417 564 21 165 4.62e-16 81.6
MsaG012199 MtrunA17_Chr4g0074111 31.293 147 98 1 417 563 18 161 5.29e-16 80.9
MsaG012199 MtrunA17_Chr1g0188031 32.075 159 92 4 414 564 17 167 6.12e-16 81.3
MsaG012199 MtrunA17_Chr2g0302431 30.719 153 104 1 412 564 15 165 8.45e-16 80.9
MsaG012199 MtrunA17_Chr5g0432471 29.605 152 102 2 414 564 9 156 1.21e-15 80.5
MsaG012199 MtrunA17_Chr2g0284011 28.387 155 108 1 410 564 5 156 2.44e-15 79.3
MsaG012199 MtrunA17_Chr4g0001331 29.114 158 109 1 407 564 10 164 2.55e-15 79.3
MsaG012199 MtrunA17_Chr1g0150321 30.625 160 108 1 405 564 1 157 5.78e-15 78.2
MsaG012199 MtrunA17_Chr6g0453681 30.818 159 102 3 410 564 10 164 6.76e-15 78.2
MsaG012199 MtrunA17_Chr6g0486661 34.109 129 77 4 644 767 909 1034 7.59e-15 79.0
MsaG012199 MtrunA17_Chr6g0468751 30.818 159 102 3 410 564 10 164 9.02e-15 77.8
MsaG012199 MtrunA17_Chr3g0132591 38.776 147 80 3 423 568 118 255 1.14e-14 77.4
MsaG012199 MtrunA17_Chr3g0091311 32.911 158 97 4 410 564 5 156 1.37e-14 74.7
MsaG012199 MtrunA17_Chr5g0428031 27.703 148 105 1 417 564 9 154 1.66e-14 76.6
MsaG012199 MtrunA17_Chr7g0272841 32.653 147 92 3 423 564 74 218 2.51e-14 77.0
MsaG012199 MtrunA17_Chr5g0419441 31.373 153 100 3 417 568 239 387 3.37e-14 76.6
MsaG012199 MtrunA17_Chr5g0441011 29.054 148 103 1 417 564 13 158 3.50e-14 75.9
MsaG012199 MtrunA17_Chr8g0386981 32.639 144 93 2 423 564 414 555 3.73e-14 76.6
MsaG012199 MtrunA17_Chr8g0346071 27.703 148 105 1 417 564 17 162 4.44e-14 75.5
MsaG012199 MtrunA17_Chr1g0202831 30.556 144 96 2 423 564 417 558 6.45e-14 75.9
MsaG012199 MtrunA17_Chr8g0346081 26.351 148 107 1 417 564 17 162 8.74e-14 74.3
MsaG012199 MtrunA17_Chr4g0061141 32.749 171 106 5 399 564 85 251 1.98e-13 73.9
MsaG012199 MtrunA17_Chr8g0385341 33.987 153 95 3 417 565 30 180 2.08e-13 73.6
MsaG012199 MtrunA17_Chr1g0200601 34.839 155 93 4 416 565 29 180 2.62e-13 73.2
MsaG012199 MtrunA17_Chr1g0188991 23.611 360 184 12 413 767 11 284 3.64e-13 73.2
MsaG012199 MtrunA17_Chr3g0130151 32.192 146 91 3 423 564 250 391 3.89e-13 73.2
MsaG012199 MtrunA17_Chr3g0091281 30.220 182 105 6 410 576 5 179 4.57e-13 69.7
MsaG012199 MtrunA17_Chr1g0176751 34.746 118 64 4 649 764 283 389 5.45e-13 72.4
MsaG012199 MtrunA17_Chr1g0205931 32.000 150 95 3 423 567 61 208 6.19e-13 72.4
MsaG012199 MtrunA17_Chr3g0132671 29.787 188 96 5 410 564 10 194 6.37e-13 72.0
MsaG012199 MtrunA17_Chr2g0333821 28.931 159 110 1 406 564 3 158 8.37e-13 71.2
MsaG012199 MtrunA17_Chr5g0432491 31.081 148 100 1 417 564 23 168 9.48e-13 71.2
MsaG012199 MtrunA17_Chr8g0384301 31.613 155 100 4 413 564 295 446 1.88e-12 70.9
MsaG012199 MtrunA17_Chr1g0166101 28.289 152 106 2 414 564 21 170 2.01e-12 70.1
MsaG012199 MtrunA17_Chr6g0450571 30.968 155 101 4 412 564 11 161 2.16e-12 70.9
MsaG012199 MtrunA17_Chr7g0274941 34.579 107 63 3 647 750 171 273 2.71e-12 68.6
MsaG012199 MtrunA17_Chr7g0274941 28.947 152 103 3 412 561 11 159 4.01e-11 65.1
MsaG012199 MtrunA17_Chr5g0409421 28.125 160 106 4 414 571 1 153 3.30e-12 69.7
MsaG012199 MtrunA17_Chr2g0299991 28.293 205 138 5 361 564 18 214 3.68e-12 68.9
MsaG012199 MtrunA17_Chr8g0345801 31.783 129 85 2 422 550 20 145 3.70e-12 67.4
MsaG012199 MtrunA17_Chr4g0038501 27.632 152 109 1 417 568 20 170 4.48e-12 70.1
MsaG012199 MtrunA17_Chr4g0040141 33.333 150 95 4 417 564 129 275 5.07e-12 69.7
MsaG012199 MtrunA17_Chr4g0063881 28.472 144 101 1 421 564 15 156 5.34e-12 68.9
MsaG012199 MtrunA17_Chr7g0218071 31.818 176 113 5 399 570 100 272 5.79e-12 69.3
MsaG012199 MtrunA17_Chr3g0131861 32.450 151 95 5 417 564 97 243 7.01e-12 68.9
MsaG012199 MtrunA17_Chr2g0330211 30.201 149 101 2 417 564 18 164 8.29e-12 68.6
MsaG012199 MtrunA17_Chr4g0047191 31.967 122 81 1 445 564 73 194 8.54e-12 67.8
MsaG012199 MtrunA17_Chr2g0321841 27.922 154 105 3 414 564 1 151 8.70e-12 68.9
MsaG012199 MtrunA17_Chr3g0091421 30.189 159 102 4 409 564 4 156 8.98e-12 65.9
MsaG012199 MtrunA17_Chr4g0047211 31.967 122 81 1 445 564 68 189 1.13e-11 67.4
MsaG012199 MtrunA17_Chr2g0317501 31.788 151 96 5 417 564 134 280 1.24e-11 68.6
MsaG012199 MtrunA17_Chr1g0170551 32.075 106 66 2 650 755 162 261 1.45e-11 68.6
MsaG012199 MtrunA17_Chr1g0190831 27.273 154 106 3 414 564 1 151 1.48e-11 68.2
MsaG012199 MtrunA17_Chr6g0453711 29.379 177 116 6 399 570 90 262 1.51e-11 67.8
MsaG012199 MtrunA17_Chr4g0038091 27.632 152 109 1 417 568 20 170 1.95e-11 68.2
MsaG012199 MtrunA17_Chr4g0000431 28.000 150 104 3 416 564 23 169 2.08e-11 67.8
MsaG012199 MtrunA17_Chr2g0317001 30.065 153 101 4 417 568 15 162 2.54e-11 67.4
MsaG012199 MtrunA17_Chr3g0091291 36.792 106 60 3 462 564 3 104 4.10e-11 63.5
MsaG012199 MtrunA17_Chr1g0170281 29.940 167 108 5 404 565 106 268 4.53e-11 66.2
MsaG012199 MtrunA17_Chr1g0185221 26.623 154 107 3 414 564 1 151 5.39e-11 66.2
MsaG012199 MtrunA17_Chr1g0162301 30.667 150 88 4 409 550 10 151 6.59e-11 65.1
MsaG012199 MtrunA17_Chr1g0173541 32.051 156 100 3 414 565 49 202 6.85e-11 65.9
MsaG012199 MtrunA17_Chr6g0453671 28.758 153 103 2 414 564 16 164 8.26e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012199 AT3G52890.2 65.539 473 150 6 341 802 464 934 0.0 632
MsaG012199 AT3G52890.4 65.539 473 150 6 341 802 464 934 0.0 632
MsaG012199 AT3G52890.1 65.539 473 150 6 341 802 464 934 0.0 632
MsaG012199 AT3G52890.3 65.539 473 150 6 341 802 464 934 0.0 632
MsaG012199 AT2G36350.1 64.163 466 156 4 346 802 486 949 0.0 609
MsaG012199 AT2G36350.1 34.161 161 77 3 1 132 1 161 1.70e-14 78.2
MsaG012199 AT5G03640.2 56.960 546 194 10 282 802 397 926 0.0 592
MsaG012199 AT5G03640.1 56.960 546 194 10 282 802 397 926 0.0 592
MsaG012199 AT5G47750.1 60.917 458 166 6 356 802 131 586 0.0 558
MsaG012199 AT4G26610.1 58.197 488 185 10 290 773 6 478 0.0 541
MsaG012199 AT5G55910.2 58.009 462 187 6 346 802 39 498 0.0 528
MsaG012199 AT5G55910.1 58.009 462 187 6 346 802 39 498 0.0 528
MsaG012199 AT2G44830.2 54.581 513 195 11 279 769 219 715 5.43e-175 523
MsaG012199 AT2G44830.3 54.581 513 195 11 279 769 219 715 5.43e-175 523
MsaG012199 AT2G44830.1 54.581 513 195 11 279 769 219 715 5.43e-175 523
MsaG012199 AT3G27580.2 60.969 392 137 6 387 769 150 534 6.12e-167 495
MsaG012199 AT3G27580.1 60.969 392 137 6 387 769 150 534 6.12e-167 495
MsaG012199 AT3G12690.1 48.250 543 252 5 249 788 30 546 7.37e-165 490
MsaG012199 AT3G12690.3 48.250 543 252 5 249 788 30 546 7.37e-165 490
MsaG012199 AT3G12690.2 48.250 543 252 5 249 788 30 546 7.37e-165 490
MsaG012199 AT5G40030.1 62.240 384 133 8 390 769 86 461 1.59e-159 473
MsaG012199 AT1G79250.1 58.354 401 155 4 390 782 119 515 4.63e-159 474
MsaG012199 AT1G79250.3 58.354 401 155 4 390 782 119 515 4.63e-159 474
MsaG012199 AT1G79250.2 58.354 401 155 4 390 782 119 515 4.63e-159 474
MsaG012199 AT1G79250.4 58.354 401 155 4 390 782 119 515 4.63e-159 474
MsaG012199 AT1G16440.1 57.513 386 149 4 390 773 86 458 3.40e-150 449
MsaG012199 AT2G26700.1 44.643 448 199 7 369 769 38 483 1.98e-127 391
MsaG012199 AT3G44610.1 54.247 365 135 7 417 761 71 423 2.72e-127 389
MsaG012199 AT2G34650.1 50.123 405 163 8 372 768 38 411 1.01e-126 387
MsaG012199 AT5G58140.6 43.842 406 172 5 391 795 551 901 1.19e-108 354
MsaG012199 AT5G58140.7 43.842 406 172 5 391 795 551 901 1.19e-108 354
MsaG012199 AT5G58140.5 43.842 406 172 5 391 795 551 901 1.19e-108 354
MsaG012199 AT5G58140.2 43.842 406 172 5 391 795 551 901 1.19e-108 354
MsaG012199 AT5G58140.1 43.842 406 172 5 391 795 551 901 1.19e-108 354
MsaG012199 AT3G14370.1 46.094 384 165 6 392 766 61 411 4.84e-108 339
MsaG012199 AT5G58140.3 45.135 370 156 3 391 760 551 873 4.15e-106 347
MsaG012199 AT3G45780.2 41.687 403 182 4 390 792 636 985 3.10e-100 333
MsaG012199 AT3G45780.1 41.687 403 182 4 390 792 636 985 3.10e-100 333
MsaG012199 AT1G53700.1 44.648 383 173 8 392 767 66 416 6.68e-99 315
MsaG012199 AT1G51170.1 39.314 379 184 11 411 774 16 363 2.50e-75 251
MsaG012199 AT3G20830.1 39.153 378 186 11 412 774 16 364 2.02e-71 240
MsaG012199 AT4G13000.1 37.845 362 184 9 412 768 15 340 1.77e-70 236
MsaG012199 AT3G25250.1 33.753 397 224 6 406 793 6 372 1.45e-66 228
MsaG012199 AT5G62310.1 33.504 391 201 9 414 795 751 1091 1.98e-54 204
MsaG012199 AT1G45160.2 33.744 406 204 10 412 802 665 1020 2.24e-54 204
MsaG012199 AT1G45160.1 35.655 359 177 8 412 766 665 973 3.42e-54 203
MsaG012199 AT1G48490.4 34.971 346 172 6 412 756 824 1117 4.00e-53 201
MsaG012199 AT1G48490.3 34.971 346 172 6 412 756 823 1116 4.75e-53 200
MsaG012199 AT1G48490.2 34.971 346 172 6 412 756 823 1116 4.75e-53 200
MsaG012199 AT1G48490.1 34.971 346 172 6 412 756 823 1116 4.75e-53 200
MsaG012199 AT1G30640.3 31.099 373 214 10 405 771 15 350 1.07e-47 176
MsaG012199 AT1G30640.2 31.351 370 211 10 408 771 111 443 1.19e-47 178
MsaG012199 AT1G30640.1 31.351 370 211 10 408 771 111 443 1.19e-47 178
MsaG012199 AT5G09890.1 32.584 356 200 8 405 756 90 409 2.59e-47 176
MsaG012199 AT5G09890.2 32.584 356 200 8 405 756 90 409 2.66e-47 176
MsaG012199 AT4G14350.3 30.749 374 212 10 405 772 107 439 7.23e-43 164
MsaG012199 AT1G03920.2 31.183 372 212 8 405 772 12 343 7.45e-43 162
MsaG012199 AT4G14350.2 30.749 374 212 10 405 772 107 439 8.00e-43 164
MsaG012199 AT4G14350.1 30.749 374 212 10 405 772 107 439 8.00e-43 164
MsaG012199 AT4G14350.4 30.749 374 212 10 405 772 107 439 8.00e-43 164
MsaG012199 AT1G03920.1 31.117 376 207 9 405 772 125 456 1.03e-42 164
MsaG012199 AT1G03920.3 31.117 376 207 9 405 772 125 456 1.03e-42 164
MsaG012199 AT4G33080.2 29.609 358 214 9 405 756 82 407 1.64e-42 162
MsaG012199 AT4G33080.1 29.050 358 216 8 405 756 82 407 2.07e-42 162
MsaG012199 AT2G20470.3 30.352 369 212 8 408 772 115 442 2.42e-42 162
MsaG012199 AT2G20470.2 29.839 372 216 7 405 772 112 442 3.76e-42 162
MsaG012199 AT2G20470.1 29.839 372 216 7 405 772 112 442 3.76e-42 162
MsaG012199 AT3G23310.1 30.481 374 215 12 405 772 108 442 6.20e-41 159
MsaG012199 AT2G19400.1 31.594 345 201 9 417 756 105 419 1.40e-39 154
MsaG012199 AT5G58140.4 45.038 131 72 0 391 521 551 681 7.16e-32 133
MsaG012199 AT5G04510.2 39.506 162 91 2 411 572 38 192 5.29e-28 117
MsaG012199 AT5G04510.2 35.821 134 80 3 638 767 196 327 2.92e-17 85.5
MsaG012199 AT5G04510.3 39.506 162 91 2 411 572 38 192 6.81e-28 115
MsaG012199 AT5G04510.1 39.506 162 91 2 411 572 38 192 9.75e-28 118
MsaG012199 AT5G04510.1 35.821 134 80 3 638 767 196 327 2.58e-17 86.3
MsaG012199 AT3G08730.1 46.094 128 63 4 645 771 285 407 1.09e-27 117
MsaG012199 AT3G08730.1 39.103 156 91 3 410 564 127 279 1.63e-26 114
MsaG012199 AT3G08730.2 46.094 128 63 4 645 771 285 407 1.09e-27 117
MsaG012199 AT3G08730.2 39.103 156 91 3 410 564 127 279 1.63e-26 114
MsaG012199 AT3G17850.1 42.568 148 83 1 417 564 882 1027 3.59e-27 119
MsaG012199 AT3G17850.1 44.144 111 60 2 647 756 1067 1176 6.74e-23 105
MsaG012199 AT3G10540.1 38.372 172 96 3 401 572 32 193 3.70e-27 116
MsaG012199 AT3G10540.1 36.567 134 79 3 638 767 197 328 8.55e-18 87.8
MsaG012199 AT3G08720.1 39.103 156 91 3 410 564 133 285 6.54e-27 115
MsaG012199 AT3G08720.1 48.673 113 54 3 645 756 291 400 9.37e-26 112
MsaG012199 AT3G08720.3 39.103 156 91 3 410 564 133 285 6.54e-27 115
MsaG012199 AT3G08720.3 48.673 113 54 3 645 756 291 400 9.37e-26 112
MsaG012199 AT3G08720.4 39.103 156 91 3 410 564 133 285 6.54e-27 115
MsaG012199 AT3G08720.4 48.673 113 54 3 645 756 291 400 9.37e-26 112
MsaG012199 AT3G08720.2 39.103 156 91 3 410 564 133 285 6.54e-27 115
MsaG012199 AT3G08720.2 48.673 113 54 3 645 756 291 400 9.37e-26 112
MsaG012199 AT2G45490.1 45.045 111 56 3 641 751 168 273 1.67e-20 93.2
MsaG012199 AT2G45490.1 35.256 156 97 2 414 568 19 171 1.85e-19 90.1
MsaG012199 AT2G20050.2 40.870 115 64 2 647 759 931 1043 7.51e-20 95.9
MsaG012199 AT2G20050.1 40.870 115 64 2 647 759 934 1046 7.99e-20 95.5
MsaG012199 AT5G18700.1 37.748 151 86 3 414 564 1 143 9.53e-20 95.5
MsaG012199 AT2G45490.2 35.256 156 97 2 414 568 19 171 2.01e-19 89.4
MsaG012199 AT2G45490.2 43.182 88 49 1 641 728 168 254 5.36e-15 76.3
MsaG012199 AT5G45810.1 26.132 287 136 5 406 691 17 228 3.46e-19 92.0
MsaG012199 AT5G45820.1 32.484 157 103 1 408 564 3 156 8.65e-19 90.5
MsaG012199 AT4G18700.1 25.979 281 132 5 412 691 21 226 1.38e-18 90.1
MsaG012199 AT4G32830.1 26.562 320 156 8 417 736 31 271 2.45e-18 87.0
MsaG012199 AT2G25880.1 35.570 149 94 1 417 565 25 171 4.97e-18 85.9
MsaG012199 AT2G25880.4 35.570 149 94 1 417 565 38 184 5.98e-18 85.9
MsaG012199 AT2G25880.3 30.846 201 117 3 365 565 54 232 9.67e-18 86.3
MsaG012199 AT1G12680.1 35.714 154 89 3 421 573 111 255 1.31e-17 87.0
MsaG012199 AT5G25110.1 30.818 159 107 1 406 564 32 187 1.56e-17 87.0
MsaG012199 AT2G25880.2 39.252 107 61 1 644 750 141 243 2.36e-17 83.2
MsaG012199 AT5G01810.1 31.013 158 106 1 407 564 2 156 3.01e-17 85.5
MsaG012199 AT5G01810.2 31.013 158 106 1 407 564 2 156 3.01e-17 85.5
MsaG012199 AT5G10930.1 34.000 150 93 4 417 564 12 157 3.37e-17 85.5
MsaG012199 AT5G01810.3 31.013 158 106 1 407 564 2 156 4.61e-17 84.3
MsaG012199 AT1G29230.1 31.481 162 108 1 403 564 60 218 5.67e-17 85.5
MsaG012199 AT4G14580.1 32.051 156 103 2 410 564 14 167 1.40e-16 83.6
MsaG012199 AT2G25090.1 34.000 150 94 3 417 564 15 161 1.71e-16 83.6
MsaG012199 AT1G54960.1 32.680 153 96 3 417 564 68 218 1.85e-16 84.3
MsaG012199 AT1G54960.2 32.680 153 96 3 417 564 68 218 1.85e-16 84.3
MsaG012199 AT3G17510.1 31.169 154 104 1 411 564 14 165 3.86e-16 82.4
MsaG012199 AT4G24400.1 30.667 150 98 2 417 564 9 154 5.54e-16 81.6
MsaG012199 AT5G57630.1 29.677 155 106 1 410 564 5 156 5.61e-16 81.6
MsaG012199 AT5G57630.2 29.677 155 106 1 410 564 5 156 5.99e-16 81.3
MsaG012199 AT2G34180.1 30.357 168 110 2 400 565 40 202 7.46e-16 81.6
MsaG012199 AT4G24400.2 30.667 150 98 2 417 564 9 154 7.89e-16 81.3
MsaG012199 AT2G30360.1 24.405 336 174 9 417 751 21 277 8.16e-16 81.3
MsaG012199 AT1G09000.1 32.680 153 96 3 417 564 69 219 1.09e-15 81.6
MsaG012199 AT1G09000.2 32.680 153 96 3 417 564 69 219 1.21e-15 81.6
MsaG012199 AT3G29160.3 32.026 153 98 2 414 564 17 165 1.89e-15 79.3
MsaG012199 AT3G06030.1 34.014 147 90 3 423 564 74 218 2.52e-15 80.5
MsaG012199 AT3G23000.1 33.750 160 87 4 414 564 22 171 2.79e-15 79.3
MsaG012199 AT3G29160.1 32.026 153 98 2 414 564 17 165 3.56e-15 79.7
MsaG012199 AT3G29160.2 32.026 153 98 2 414 564 17 165 3.56e-15 79.7
MsaG012199 AT3G01090.2 32.680 153 97 2 414 564 39 187 4.48e-15 79.3
MsaG012199 AT3G01090.3 32.680 153 97 2 414 564 16 164 4.67e-15 79.3
MsaG012199 AT3G01090.1 32.680 153 97 2 414 564 16 164 4.67e-15 79.3
MsaG012199 AT2G26980.1 29.730 148 102 1 417 564 14 159 1.02e-14 77.4
MsaG012199 AT1G30270.1 29.054 148 103 1 417 564 31 176 1.03e-14 78.2
MsaG012199 AT2G26980.3 29.730 148 102 1 417 564 14 159 1.12e-14 77.8
MsaG012199 AT5G21326.1 22.981 322 169 7 417 736 13 257 1.19e-14 77.8
MsaG012199 AT2G26980.4 29.730 148 102 1 417 564 24 169 1.28e-14 77.8
MsaG012199 AT1G30270.2 29.054 148 103 1 417 564 31 176 1.28e-14 77.8
MsaG012199 AT4G24100.2 24.042 287 144 8 406 691 22 235 2.02e-14 77.8
MsaG012199 AT2G26980.5 29.730 148 102 1 417 564 14 159 2.11e-14 76.6
MsaG012199 AT4G24100.1 24.042 287 144 8 406 691 22 235 2.39e-14 77.4
MsaG012199 AT2G26980.2 29.730 148 102 1 417 564 14 159 2.46e-14 74.7
MsaG012199 AT4G24100.3 24.042 287 144 8 406 691 38 251 2.62e-14 77.4
MsaG012199 AT4G24100.4 24.042 287 144 8 406 691 38 251 2.77e-14 77.4
MsaG012199 AT1G35670.1 30.622 209 126 6 416 617 25 221 2.78e-14 76.6
MsaG012199 AT5G39440.1 31.373 153 99 2 414 564 16 164 3.54e-14 76.6
MsaG012199 AT4G04720.2 32.484 157 96 4 415 565 78 230 3.92e-14 76.6
MsaG012199 AT4G04720.2 32.381 105 64 3 651 753 241 340 4.40e-11 66.6
MsaG012199 AT4G04720.1 32.484 157 96 4 415 565 78 230 3.92e-14 76.6
MsaG012199 AT4G04720.1 32.381 105 64 3 651 753 241 340 4.40e-11 66.6
MsaG012199 AT4G30960.1 32.432 148 97 1 417 564 24 168 6.71e-14 75.1
MsaG012199 AT1G69220.1 27.317 205 133 3 377 568 196 397 7.08e-14 76.3
MsaG012199 AT2G41860.1 33.987 153 95 3 417 565 54 204 8.64e-14 75.5
MsaG012199 AT2G41860.2 33.987 153 95 3 417 565 54 204 9.02e-14 75.5
MsaG012199 AT5G58380.1 29.861 144 98 1 421 564 16 156 9.12e-14 75.1
MsaG012199 AT1G63700.1 31.507 146 96 2 421 564 404 547 1.25e-13 75.5
MsaG012199 AT1G63700.2 31.507 146 96 2 421 564 404 547 1.25e-13 75.5
MsaG012199 AT5G14720.1 32.258 155 99 4 412 564 11 161 1.32e-13 75.1
MsaG012199 AT5G14720.2 32.258 155 99 4 412 564 11 161 1.32e-13 75.1
MsaG012199 AT4G09570.1 30.144 209 127 6 416 617 24 220 1.42e-13 74.7
MsaG012199 AT1G53570.6 33.103 145 91 4 423 564 220 361 1.54e-13 74.7
MsaG012199 AT1G53570.7 33.103 145 91 4 423 564 220 361 1.61e-13 74.3
MsaG012199 AT1G53570.1 33.103 145 91 4 423 564 220 361 1.64e-13 74.7
MsaG012199 AT1G53570.4 33.103 145 91 4 423 564 220 361 1.71e-13 74.7
MsaG012199 AT1G53570.2 33.103 145 91 4 423 564 220 361 1.74e-13 74.7
MsaG012199 AT1G53570.3 33.103 145 91 4 423 564 220 361 1.74e-13 74.7
MsaG012199 AT1G48260.1 31.081 148 100 1 417 564 11 156 3.64e-13 72.8
MsaG012199 AT1G01140.3 28.571 168 113 2 397 564 4 164 3.78e-13 73.2
MsaG012199 AT1G01140.2 28.571 168 113 2 397 564 4 164 3.78e-13 72.8
MsaG012199 AT1G01140.1 28.571 168 113 2 397 564 4 164 3.85e-13 72.8
MsaG012199 AT2G38490.1 33.333 159 96 5 417 571 28 180 4.29e-13 72.8
MsaG012199 AT5G28290.1 28.289 152 107 2 414 564 1 151 4.57e-13 73.2
MsaG012199 AT5G28290.2 28.289 152 107 2 414 564 1 151 4.57e-13 73.2
MsaG012199 AT5G28290.3 28.289 152 107 2 414 564 1 151 4.67e-13 73.2
MsaG012199 AT4G10730.1 23.823 361 184 13 412 767 42 316 7.48e-13 72.8
MsaG012199 AT4G10730.2 23.823 361 184 13 412 767 22 296 7.92e-13 72.8
MsaG012199 AT1G70430.3 32.903 155 98 4 412 564 11 161 8.61e-13 72.4
MsaG012199 AT1G70430.1 32.903 155 98 4 412 564 11 161 9.57e-13 72.4
MsaG012199 AT1G70430.4 32.903 155 98 4 412 564 11 161 1.02e-12 72.0
MsaG012199 AT3G04810.2 26.974 152 109 2 414 564 1 151 1.15e-12 72.0
MsaG012199 AT3G04810.1 26.974 152 109 2 414 564 1 151 1.15e-12 72.0
MsaG012199 AT3G04810.3 26.974 152 109 2 414 564 1 151 1.15e-12 72.0
MsaG012199 AT5G39420.1 32.353 170 108 5 399 564 85 251 1.65e-12 71.6
MsaG012199 AT5G35410.2 28.276 145 100 2 421 564 15 156 1.77e-12 70.5
MsaG012199 AT1G69220.2 30.625 160 105 3 409 568 217 370 3.83e-12 70.5
MsaG012199 AT5G35410.1 28.276 145 100 2 421 564 15 156 4.24e-12 69.7
MsaG012199 AT1G32320.1 32.394 142 88 2 423 564 54 187 4.91e-12 68.2
MsaG012199 AT1G53050.2 32.450 151 95 5 417 564 134 280 5.00e-12 70.1
MsaG012199 AT1G53050.1 32.450 151 95 5 417 564 134 280 5.00e-12 70.1
MsaG012199 AT3G61960.1 30.597 134 90 2 417 550 10 140 5.45e-12 69.7
MsaG012199 AT3G61960.2 31.008 129 86 2 422 550 15 140 5.74e-12 69.7
MsaG012199 AT3G10660.2 30.851 188 112 8 389 565 156 336 7.11e-12 69.7
MsaG012199 AT3G10660.1 30.851 188 112 8 389 565 156 336 7.11e-12 69.7
MsaG012199 AT1G50700.3 30.526 190 119 6 382 565 41 223 7.67e-12 68.9
MsaG012199 AT4G14480.1 30.519 154 104 2 412 564 10 161 7.82e-12 68.9
MsaG012199 AT1G50700.1 30.526 190 119 6 382 565 41 223 8.88e-12 68.9
MsaG012199 AT4G35310.2 30.952 168 107 5 409 571 88 251 1.09e-11 68.6
MsaG012199 AT4G35310.1 30.952 168 107 5 409 571 88 251 1.09e-11 68.6
MsaG012199 AT4G19110.1 28.481 158 108 4 414 571 1 153 1.30e-11 68.2
MsaG012199 AT3G07980.1 26.974 152 110 1 417 568 20 170 1.45e-11 68.9
MsaG012199 AT1G50700.2 30.526 190 119 6 382 565 41 223 1.47e-11 68.2
MsaG012199 AT2G17290.1 31.548 168 106 5 409 571 76 239 1.55e-11 68.2
MsaG012199 AT2G17290.2 31.548 168 106 5 409 571 76 239 1.55e-11 68.2
MsaG012199 AT3G15220.1 31.169 154 100 4 416 568 14 162 1.56e-11 68.6
MsaG012199 AT3G07980.2 26.974 152 110 1 417 568 20 170 1.63e-11 68.9
MsaG012199 AT4G10010.2 33.553 152 92 6 417 564 156 302 2.06e-11 68.2
MsaG012199 AT5G01820.1 31.690 142 94 1 423 564 28 166 2.67e-11 67.0
MsaG012199 AT1G61950.1 32.468 154 97 4 417 565 98 249 2.71e-11 67.4
MsaG012199 AT4G21940.2 33.333 105 63 3 651 753 263 362 3.97e-11 67.0
MsaG012199 AT1G54510.4 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
MsaG012199 AT1G54510.2 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
MsaG012199 AT1G54510.1 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
MsaG012199 AT1G54510.3 26.623 154 107 3 414 564 1 151 4.06e-11 67.0
MsaG012199 AT1G08650.1 33.333 108 64 3 648 752 172 274 4.26e-11 65.1
MsaG012199 AT4G21940.3 33.333 105 63 3 651 753 263 362 4.30e-11 66.6
MsaG012199 AT4G21940.1 33.333 105 63 3 651 753 263 362 4.35e-11 66.6
MsaG012199 AT4G29810.1 27.854 219 145 6 353 564 2 214 5.96e-11 65.5
MsaG012199 AT5G23580.1 33.121 157 99 3 416 568 21 175 6.33e-11 66.2
MsaG012199 AT2G17890.1 29.469 207 117 8 423 616 114 304 6.43e-11 66.2
MsaG012199 AT1G54610.1 31.788 151 96 5 417 564 118 264 8.34e-11 65.9
MsaG012199 AT1G54610.3 31.788 151 96 5 417 564 118 264 8.34e-11 65.9
MsaG012199 AT1G54610.2 31.788 151 96 5 417 564 118 264 8.34e-11 65.9
MsaG012199 AT4G29810.3 28.916 166 113 3 400 564 62 223 8.90e-11 64.7
MsaG012199 AT1G73500.1 31.034 145 89 4 423 564 53 189 9.60e-11 64.3
MsaG012199 AT3G46930.2 28.667 150 93 5 422 564 206 348 9.80e-11 65.5

Find 172 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCCAAGTTTCGCGATTT+TGG 0.101958 3:+20644484 MsaT012199.1:CDS
GTTTGTCCGTCTCAGGCTTC+TGG 0.251704 3:+20641678 MsaT012199.1:CDS
CCTTCTTTGAAGGCCTCAAC+TGG 0.257721 3:+20644431 MsaT012199.1:CDS
GTTTATCTTGCAGAACTAAT+TGG 0.264923 3:+20642740 MsaT012199.1:CDS
CCAGAGATATCTACACTTTC+CGG 0.270119 3:+20641864 MsaT012199.1:CDS
CCGTCTCAGGCTTCTGGAAT+TGG 0.274806 3:+20641684 MsaT012199.1:CDS
AGAGCTTAGTCGTAGTAATA+TGG 0.275471 3:-20642895 None:intergenic
CATGAACTTCCTTAAGAAAA+AGG 0.286513 3:+20642235 MsaT012199.1:CDS
TCCTTCTGTGCAGCCATAGA+TGG 0.305582 3:-20644517 None:intergenic
TGGAACTAGTGCTCCATCTA+TGG 0.306658 3:+20644504 MsaT012199.1:CDS
TAAGCTCTCTTGCTTGGTTA+TGG 0.306787 3:+20642910 MsaT012199.1:CDS
ACTTAAATTTGAGGCACTTT+AGG 0.314537 3:+20642681 MsaT012199.1:CDS
CCATAACTTTCAGTGCAAAA+AGG 0.316784 3:-20642772 None:intergenic
GTTCCTACAAATCAGGAAAA+AGG 0.319893 3:+20641541 MsaT012199.1:CDS
AATCGATTAGGTTCGATAAA+AGG 0.321850 3:+20644385 MsaT012199.1:CDS
CGCAACAGAGTTCTCTTAAA+AGG 0.324295 3:+20641646 MsaT012199.1:CDS
AAGTTCATGTTATTGAATAT+TGG 0.333214 3:-20642221 None:intergenic
TGCTACATCGGGAAATTTAC+CGG 0.345376 3:-20641883 None:intergenic
AAAGAGGAACAATTTGATCT+TGG 0.357600 3:-20641986 None:intergenic
TTCTTTGCGGCATCTGCATC+GGG 0.361746 3:-20643920 None:intergenic
CTCAAGCCTTAGTACATGTT+TGG 0.363903 3:+20642193 MsaT012199.1:CDS
AAGCTTGGTAGTGGAGATAT+TGG 0.371371 3:+20642713 MsaT012199.1:CDS
TTAACTCAATTAATGTTAGT+AGG 0.372455 3:+20642396 MsaT012199.1:CDS
GATAATGTATCATCATTTGA+TGG 0.378789 3:-20644265 None:intergenic
TCGGAGAGCCTTAAGTTTCC+AGG 0.381408 3:+20644298 MsaT012199.1:CDS
GCTCCTATTCTATTGTCTCC+CGG 0.388519 3:+20644019 MsaT012199.1:CDS
TTCATGCAAGAGATTTGATC+AGG 0.391727 3:+20644338 MsaT012199.1:CDS
GATCAGGGGATTGTTGATAA+AGG 0.391927 3:+20644354 MsaT012199.1:CDS
CTTCTTTGCGGCATCTGCAT+CGG 0.393516 3:-20643921 None:intergenic
TGCTTGCCAGCTTCAACCTC+AGG 0.397955 3:-20642011 None:intergenic
CAGTTCTTCAATGCCGGATA+AGG 0.400698 3:+20642100 MsaT012199.1:CDS
AAACAGCATCCCTTCTTTGA+AGG 0.402283 3:+20644421 MsaT012199.1:CDS
CATGTGAGATAGTGGAATAC+AGG 0.405170 3:+20641469 MsaT012199.1:CDS
GGAAAATGCAAATGATTTAG+AGG 0.406490 3:+20644537 MsaT012199.1:CDS
AGTTCCAAAATCGCGAAACT+TGG 0.408752 3:-20644488 None:intergenic
GAATATAGTGTAGGAAGAAA+TGG 0.410692 3:-20642872 None:intergenic
ATCATTTGATGGACCTTTGA+AGG 0.413604 3:-20644254 None:intergenic
GATTAAAGTTTGTCCGTCTC+AGG 0.419899 3:+20641671 MsaT012199.1:CDS
AAAATCAAGATCGAAGGAAA+AGG 0.421424 3:+20642490 MsaT012199.1:CDS
CTCCTATTCTATTGTCTCCC+GGG 0.422640 3:+20644020 MsaT012199.1:CDS
AGTGCCTGCTTTAAACTAAC+AGG 0.422731 3:-20641717 None:intergenic
TGAGGCACTTTAGGCTGATA+AGG 0.425604 3:+20642690 MsaT012199.1:CDS
AGTAGTTGTTCCTACAAATC+AGG 0.427686 3:+20641534 MsaT012199.1:CDS
TGAGACGGACAAACTTTAAT+CGG 0.438910 3:-20641669 None:intergenic
CATCTCTCAGGCATCAGAAA+TGG 0.441355 3:+20641752 MsaT012199.1:CDS
AAGAGGAACAATTTGATCTT+GGG 0.443105 3:-20641985 None:intergenic
AAGACCTCCAATCCTTGCTC+AGG 0.443875 3:+20643941 MsaT012199.1:CDS
AAGGATCCTGAAAATCGATT+AGG 0.446350 3:+20644373 MsaT012199.1:CDS
TCGCGAAACTTGGGGAGCTC+TGG 0.447603 3:-20644478 None:intergenic
GAAGATGGTTTGACTAACAT+TGG 0.447639 3:-20643896 None:intergenic
GCTGTAGATTGGTGGACTTT+CGG 0.448197 3:+20644196 MsaT012199.1:CDS
CTTGCATGAAAACTGACTAT+AGG 0.448357 3:-20644325 None:intergenic
AAGCAGGAAACTTGCCAATC+CGG 0.448575 3:-20643995 None:intergenic
CAATAGAATAGGAGCAAAGC+AGG 0.448631 3:-20644011 None:intergenic
CCTTGAGTATTTGCACATGA+TGG 0.456761 3:+20643772 MsaT012199.1:CDS
CTTTCACCTGAGGTTGAAGC+TGG 0.459307 3:+20642005 MsaT012199.1:CDS
TTGGTTATGGAGTATTGTCC+AGG 0.460122 3:+20642923 MsaT012199.1:CDS
AGTTTAAAGCAGGCACTTAG+AGG 0.460496 3:+20641723 MsaT012199.1:CDS
AATTAGTTCTGCAAGATAAA+CGG 0.460739 3:-20642738 None:intergenic
TACGACTAAGCTCTCTTGCT+TGG 0.462506 3:+20642904 MsaT012199.1:CDS
GTTCCAAAATCGCGAAACTT+GGG 0.464333 3:-20644487 None:intergenic
TAGCAATACATGTGAGATAG+TGG 0.465504 3:+20641461 MsaT012199.1:CDS
TAACTCAATTAATGTTAGTA+GGG 0.466488 3:+20642397 MsaT012199.1:CDS
AGTAGTTTCAACAAGGAGAA+TGG 0.472113 3:+20642296 MsaT012199.1:CDS
CCTAGTTCTAGCAATGATAG+TGG 0.472374 3:+20642158 MsaT012199.1:CDS
ACTGGCCCCTGAGCAAGGAT+TGG 0.473992 3:-20643948 None:intergenic
TAGAGGATTGTGCATCTCTC+AGG 0.474171 3:+20641740 MsaT012199.1:CDS
TATGTCCATCTTCGCGTACT+AGG 0.475120 3:-20643829 None:intergenic
ACACCCTTTCTGTCTCCAAC+CGG 0.476097 3:+20643976 MsaT012199.1:CDS
GGCCCCTGAGCAAGGATTGG+AGG 0.482791 3:-20643945 None:intergenic
ACAGAAAGGGTGTATGCAAC+TGG 0.485397 3:-20643966 None:intergenic
GCACGGTCTAACTCCTTCGT+TGG 0.485875 3:+20644121 MsaT012199.1:CDS
GGCAAAATCTCGAAAGATGA+AGG 0.485968 3:+20644042 MsaT012199.1:CDS
TAGGAGTACCTGGAAACTTA+AGG 0.486452 3:-20644306 None:intergenic
CTTTCTGTCTCCAACCGGAT+TGG 0.486624 3:+20643981 MsaT012199.1:CDS
CCAGTTGAGGCCTTCAAAGA+AGG 0.487068 3:-20644431 None:intergenic
ATGGATGATCCAACATTTGA+AGG 0.487176 3:-20642853 None:intergenic
GACATGGAAACGCTGTAGAT+TGG 0.493784 3:+20644185 MsaT012199.1:CDS
AATATCCTAGTACGCGAAGA+TGG 0.496440 3:+20643824 MsaT012199.1:CDS
CGAAACTTGGGGAGCTCTGG+TGG 0.496629 3:-20644475 None:intergenic
TTGTCTCAGTTCTTCAATGC+CGG 0.496819 3:+20642094 MsaT012199.1:CDS
GCCTCAACTGGGCTCTAATA+CGG 0.497805 3:+20644443 MsaT012199.1:CDS
TCCATCTATGGCTGCACAGA+AGG 0.498516 3:+20644516 MsaT012199.1:CDS
CCGGAAAGTGTAGATATCTC+TGG 0.499119 3:-20641864 None:intergenic
CTGATAAGGAAGCTTGGTAG+TGG 0.502190 3:+20642704 MsaT012199.1:CDS
GGTTGGCATGGTAAAGAAGT+TGG 0.502482 3:+20641824 MsaT012199.1:CDS
AGCATGGTAACTTAAATTTG+AGG 0.507182 3:+20642672 MsaT012199.1:CDS
GCCCCGGGAGACAATAGAAT+AGG 0.508020 3:-20644022 None:intergenic
GTGTAGATATCTCTGGCACT+AGG 0.508864 3:-20641857 None:intergenic
GAGCTTAGTCGTAGTAATAT+GGG 0.509342 3:-20642894 None:intergenic
GGAGCCTGTTAGTTTAAAGC+AGG 0.512003 3:+20641713 MsaT012199.1:CDS
AAGCTTGTTGCATTGACCAC+AGG 0.515232 3:-20641936 None:intergenic
CTTCAATGCCGGATAAGGAC+CGG 0.517529 3:+20642105 MsaT012199.1:CDS
AAATCAAGATCGAAGGAAAA+GGG 0.518009 3:+20642491 MsaT012199.1:CDS
AAGAGAGATCCTTCAAATGT+TGG 0.520430 3:+20642844 MsaT012199.1:CDS
CAAGATTTACTCGACGTAGC+AGG 0.521864 3:-20642074 None:intergenic
TGATTTGAACTGCACGGAGA+TGG 0.522640 3:-20642362 None:intergenic
CTTCTTTGAAGGCCTCAACT+GGG 0.523669 3:+20644432 MsaT012199.1:CDS
TATGGAAAGACTCCCTTCAA+AGG 0.526777 3:+20644241 MsaT012199.1:CDS
AGGATTGGAGGTCTTCTTTG+CGG 0.526902 3:-20643933 None:intergenic
CTGAAATTCAAACTAAAACC+AGG 0.528779 3:-20642431 None:intergenic
GCATCTGCATCGGGTGAAGA+TGG 0.530836 3:-20643911 None:intergenic
ACATGTCAAAACACTCGAGA+TGG 0.531457 3:+20642624 MsaT012199.1:CDS
AACATATGAATATCTTGCTC+CGG 0.532760 3:+20644144 MsaT012199.1:CDS
CCACTATCATTGCTAGAACT+AGG 0.538741 3:-20642158 None:intergenic
AGTAGGGATTCAAGTAAACC+TGG 0.539458 3:+20642413 MsaT012199.1:CDS
TCAACTACAAGCTGTGGAAG+TGG 0.540222 3:-20644088 None:intergenic
GAGTTAGACCGTGCATTGGT+AGG 0.541228 3:-20644112 None:intergenic
TCTGACCTCTAGCACTTCCT+CGG 0.541286 3:-20642045 None:intergenic
AGTGAAGAGAGCAATCTTAG+TGG 0.541738 3:+20642575 MsaT012199.1:CDS
TGACAGAACATCTGAGTGAC+AGG 0.542595 3:-20643871 None:intergenic
TTTAGGCTGATAAGGAAGCT+TGG 0.543262 3:+20642698 MsaT012199.1:CDS
TCATTTGATGGACCTTTGAA+GGG 0.546753 3:-20644253 None:intergenic
CTTGAGTATTTGCACATGAT+GGG 0.550096 3:+20643773 MsaT012199.1:CDS
CAATCCGGTTGGAGACAGAA+AGG 0.550974 3:-20643980 None:intergenic
GCTTCAACCTCAGGTGAAAG+AGG 0.551282 3:-20642002 None:intergenic
AATTGTTCCTCTTTCACCTG+AGG 0.552900 3:+20641995 MsaT012199.1:CDS
CAGTTGAGGCCTTCAAAGAA+GGG 0.554044 3:-20644430 None:intergenic
TACATTATCAAATGTTGTGT+CGG 0.554976 3:+20644279 MsaT012199.1:CDS
ATGCAACTGGCCCCTGAGCA+AGG 0.560639 3:-20643953 None:intergenic
ATGGAAACGCTGTAGATTGG+TGG 0.562974 3:+20644188 MsaT012199.1:CDS
CATGCAAGAGATTTGATCAG+GGG 0.564160 3:+20644340 MsaT012199.1:CDS
GTAATATGGGAATATAGTGT+AGG 0.564957 3:-20642881 None:intergenic
CCATCATGTGCAAATACTCA+AGG 0.565740 3:-20643772 None:intergenic
TGAACTCGATATTGCTACAT+CGG 0.566690 3:-20641895 None:intergenic
TCTAGCAATGATAGTGGAGT+GGG 0.567828 3:+20642164 MsaT012199.1:CDS
GAACTCGATATTGCTACATC+GGG 0.570695 3:-20641894 None:intergenic
TTCAATGCCGGATAAGGACC+GGG 0.572791 3:+20642106 MsaT012199.1:CDS
AGACCTCCAATCCTTGCTCA+GGG 0.575611 3:+20643942 MsaT012199.1:CDS
AAACTGACTATAGGAGTACC+TGG 0.581665 3:-20644316 None:intergenic
TCATCAAGAGTATCAGAGGT+TGG 0.582375 3:+20641807 MsaT012199.1:CDS
TGTAGATATCTCTGGCACTA+GGG 0.585695 3:-20641856 None:intergenic
AGCACATGCAGATCACCGCC+TGG 0.586843 3:-20642941 None:intergenic
CTAGAGGTCATAGTACTTCG+CGG 0.588895 3:+20641622 MsaT012199.1:CDS
AATCCGGTTGGAGACAGAAA+GGG 0.591341 3:-20643979 None:intergenic
GCTTAACAGAAATGACAACT+AGG 0.592360 3:+20641955 MsaT012199.1:CDS
CGCTACTAGTAGTTTCAACA+AGG 0.593597 3:+20642289 MsaT012199.1:CDS
TGCTAATCATTCTATTCCTG+TGG 0.594286 3:+20641920 MsaT012199.1:CDS
TCATGCAAGAGATTTGATCA+GGG 0.596246 3:+20644339 MsaT012199.1:CDS
GAGATTAAAAGTTCATCTAG+AGG 0.597129 3:+20641606 MsaT012199.1:CDS
ATGCTATGATTTGAACTGCA+CGG 0.599211 3:-20642368 None:intergenic
AGGAAACTTGCCAATCCGGT+TGG 0.600407 3:-20643991 None:intergenic
CAGCTCATCAAGAGTATCAG+AGG 0.602114 3:+20641803 MsaT012199.1:CDS
TTCCAAAATCGCGAAACTTG+GGG 0.602237 3:-20644486 None:intergenic
TTCTAGCAATGATAGTGGAG+TGG 0.602696 3:+20642163 MsaT012199.1:CDS
TCCTATTCTATTGTCTCCCG+GGG 0.604566 3:+20644021 MsaT012199.1:CDS
GTAGGCTCAACTACAAGCTG+TGG 0.608343 3:-20644094 None:intergenic
CATGTCAAAACACTCGAGAT+GGG 0.608358 3:+20642625 MsaT012199.1:CDS
GCTGACATAGCTGCTCAAGT+TGG 0.612275 3:+20644064 MsaT012199.1:CDS
AAGAGTATCAGAGGTTGGCA+TGG 0.615640 3:+20641812 MsaT012199.1:CDS
CCGGAGATCATCAAAAGTGA+GGG 0.616865 3:+20644163 MsaT012199.1:CDS
GAAGGAGTTAGACCGTGCAT+TGG 0.619839 3:-20644116 None:intergenic
TGTATATCGAGATCTAAAGC+CGG 0.625042 3:+20643799 MsaT012199.1:CDS
ATCATCAAAAGTGAGGGACA+TGG 0.626030 3:+20644169 MsaT012199.1:CDS
CAAGCAAACGCTACGAACCG+AGG 0.626592 3:+20642028 MsaT012199.1:CDS
ATGTGAGATAGTGGAATACA+GGG 0.628803 3:+20641470 MsaT012199.1:CDS
TCCGGAGATCATCAAAAGTG+AGG 0.628843 3:+20644162 MsaT012199.1:CDS
CCAATTCCAGAAGCCTGAGA+CGG 0.637306 3:-20641684 None:intergenic
ACGAACCGAGGAAGTGCTAG+AGG 0.641215 3:+20642040 MsaT012199.1:CDS
GGCTTCTGGAATTGGCATCG+CGG 0.647396 3:+20641692 MsaT012199.1:CDS
CATCATGTGCAAATACTCAA+GGG 0.648325 3:-20643771 None:intergenic
CGTGCGATTCAACAGCAGCA+TGG 0.649464 3:+20642656 MsaT012199.1:CDS
TAGTTGAGCCTACCAATGCA+CGG 0.658606 3:+20644104 MsaT012199.1:CDS
ACTACTAGTAGCGCAGCTTG+AGG 0.673996 3:-20642279 None:intergenic
GACCTCCAATCCTTGCTCAG+GGG 0.676074 3:+20643943 MsaT012199.1:CDS
CTATCATTGCTAGAACTAGG+TGG 0.677249 3:-20642155 None:intergenic
ATATTCATATGTTCCAACGA+AGG 0.681950 3:-20644134 None:intergenic
TTGTAGGAACAACTACTCTG+AGG 0.686360 3:-20641528 None:intergenic
CTGGGCTCTAATACGGTGTG+CGG 0.688622 3:+20644450 MsaT012199.1:CDS
ACCGTATTAGAGCCCAGTTG+AGG 0.696795 3:-20644444 None:intergenic
GTTATGGAGTATTGTCCAGG+CGG 0.701926 3:+20642926 MsaT012199.1:CDS
CTTAGTGGTTCGAATCGCAG+TGG 0.709666 3:+20642590 MsaT012199.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 20641450 20644594 20641450 ID=MsaG012199
Chr3 mRNA 20641450 20644594 20641450 ID=MsaT012199.1;Parent=MsaG012199
Chr3 exon 20641450 20643008 20641450 ID=MsaT012199.1.exon1;Parent=MsaT012199.1
Chr3 CDS 20641450 20643008 20641450 ID=cds.MsaT012199.1;Parent=MsaT012199.1
Chr3 exon 20643745 20644594 20643745 ID=MsaT012199.1.exon2;Parent=MsaT012199.1
Chr3 CDS 20643745 20644594 20643745 ID=cds.MsaT012199.1;Parent=MsaT012199.1
Gene Sequence

>MsaT012199.1

ATGAATGCATCTAGCAATACATGTGAGATAGTGGAATACAGGGAAGAGATATTTCCCGAGTTCGAAACAGATGAAAAGCCTCAGAGTAGTTGTTCCTACAAATCAGGAAAAAGGTACTCGATTGAGGCTGATATTGATCGTCTTTTCAAGGCTATTGAGATTAAAAGTTCATCTAGAGGTCATAGTACTTCGCGGTCGCAACAGAGTTCTCTTAAAAGGCCGATTAAAGTTTGTCCGTCTCAGGCTTCTGGAATTGGCATCGCGGAGCCTGTTAGTTTAAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCAGAAATGGCTGCATTGAAGAGAGTATCAAAGCAATGCAGCTCATCAAGAGTATCAGAGGTTGGCATGGTAAAGAAGTTGGTTGAAATCTCCCTAGTGCCAGAGATATCTACACTTTCCGGTAAATTTCCCGATGTAGCAATATCGAGTTCAAGTGCTAATCATTCTATTCCTGTGGTCAATGCAACAAGCTTAACAGAAATGACAACTAGGTTTGTGTCCCAAGATCAAATTGTTCCTCTTTCACCTGAGGTTGAAGCTGGCAAGCAAACGCTACGAACCGAGGAAGTGCTAGAGGTCAGAATGAATCCTGCTACGTCGAGTAAATCTTGTCTCAGTTCTTCAATGCCGGATAAGGACCGGGAGAAAAATTTTCATTGTGCATCTTGTCCACCTAGTTCTAGCAATGATAGTGGAGTGGGCAAAAACTCAAGCCTTAGTACATGTTTGGCAAAACCAATATTCAATAACATGAACTTCCTTAAGAAAAAGGTAAAGAAAGATCAATGTTCTGCCTCAAGCTGCGCTACTAGTAGTTTCAACAAGGAGAATGGAAATTCTGATCTAAAGCATGATATTAAAGAAAATGATGATAAACCATCTCCGTGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTAGTAGGGATTCAAGTAAACCTGGTTTTAGTTTGAATTTCAGTAAGAAAACTAAGTTTCTTGTTACAAAAGTTGACGAAAAATCAAGATCGAAGGAAAAGGGTGAGTTCTCTCAGAACTCAAAAAGTAGCATGGGTGAGTATAGTACTAGTAGCACAAGTATCAGTGAAGAGAGCAATCTTAGTGGTTCGAATCGCAGTGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAAGCTATTCGTGCGATTCAACAGCAGCATGGTAACTTAAATTTGAGGCACTTTAGGCTGATAAGGAAGCTTGGTAGTGGAGATATTGGAACCGTTTATCTTGCAGAACTAATTGGTACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAATGAATTTTTGGCTAGCAGGAAGAAAACATTTAGAGTTCAAACTGAAAGAGAGATCCTTCAAATGTTGGATCATCCATTTCTTCCTACACTATATTCCCATATTACTACGACTAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGTGATCTGCATGTGCTGCGACAGAAGCAAACATACAAGAGCTTTTCGGAGCAAGCAGCTAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCGGAAAATATCCTAGTACGCGAAGATGGACATATTATGCTGACAGATTTTGACCTGTCACTCAGATGTTCTGTCAATCCAATGTTAGTCAAACCATCTTCACCCGATGCAGATGCCGCAAAGAAGACCTCCAATCCTTGCTCAGGGGCCAGTTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTTTCCTGCTTTGCTCCTATTCTATTGTCTCCCGGGGCAAAATCTCGAAAGATGAAGGCTGACATAGCTGCTCAAGTTGGTCCACTTCCACAGCTTGTAGTTGAGCCTACCAATGCACGGTCTAACTCCTTCGTTGGAACATATGAATATCTTGCTCCGGAGATCATCAAAAGTGAGGGACATGGAAACGCTGTAGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTATATGGAAAGACTCCCTTCAAAGGTCCATCAAATGATGATACATTATCAAATGTTGTGTCGGAGAGCCTTAAGTTTCCAGGTACTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGGGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCGATAAAAGGTGCTGCAGAAATAAAACAGCATCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCGGCACCACCAGAGCTCCCCAAGTTTCGCGATTTTGGAACTAGTGCTCCATCTATGGCTGCACAGAAGGAAAATGCAAATGATTTAGAGGATATAGATGATTGTGAAGAGTTTGAGCTTTTTTAG
Protein sequence

>MsaT012199.1

MNASSNTCEIVEYREEIFPEFETDEKPQSSCSYKSGKRYSIEADIDRLFKAIEIKSSSRGHSTSRSQQSSLKRPIKVCPSQASGIGIAEPVSLKQALRGLCISQASEMAALKRVSKQCSSSRVSEVGMVKKLVEISLVPEISTLSGKFPDVAISSSSANHSIPVVNATSLTEMTTRFVSQDQIVPLSPEVEAGKQTLRTEEVLEVRMNPATSSKSCLSSSMPDKDREKNFHCASCPPSSSNDSGVGKNSSLSTCLAKPIFNNMNFLKKKVKKDQCSASSCATSSFNKENGNSDLKHDIKENDDKPSPCSSNHSIEVNSINVSRDSSKPGFSLNFSKKTKFLVTKVDEKSRSKEKGEFSQNSKSSMGEYSTSSTSISEESNLSGSNRSGQRPHMSKHSRWEAIRAIQQQHGNLNLRHFRLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSHITTTKLSCLVMEYCPGGDLHVLRQKQTYKSFSEQAARFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKPSSPDADAAKKTSNPCSGASCIHPFCLQPDWQVSCFAPILLSPGAKSRKMKADIAAQVGPLPQLVVEPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNDDTLSNVVSESLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGTSAPSMAAQKENANDLEDIDDCEEFELF*