AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG012408

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012408 MtrunA17_Chr3g0080101 97.007 802 20 1 1 798 1 802 0.0 1605
MsaG012408 MtrunA17_Chr7g0266031 50.680 882 345 18 1 798 1 876 0.0 744
MsaG012408 MtrunA17_Chr1g0179101 50.057 879 338 18 1 798 1 859 0.0 733
MsaG012408 MtrunA17_Chr2g0290691 58.650 474 182 6 338 798 132 604 0.0 570
MsaG012408 MtrunA17_Chr7g0250631 62.785 395 133 5 375 765 331 715 1.69e-178 531
MsaG012408 MtrunA17_Chr7g0227331 60.870 437 159 6 338 765 157 590 4.42e-178 525
MsaG012408 MtrunA17_Chr6g0449401 54.959 484 159 8 333 765 176 651 3.38e-176 522
MsaG012408 MtrunA17_Chr8g0335351 63.613 393 130 5 375 763 337 720 6.76e-175 522
MsaG012408 MtrunA17_Chr2g0309421 58.473 419 159 6 367 783 135 540 1.86e-159 475
MsaG012408 MtrunA17_Chr8g0356291 53.103 435 171 8 386 798 101 524 3.23e-153 457
MsaG012408 MtrunA17_Chr4g0063311 50.627 399 176 8 383 764 63 457 1.88e-134 408
MsaG012408 MtrunA17_Chr2g0321101 53.050 377 152 6 394 757 70 434 1.89e-129 394
MsaG012408 MtrunA17_Chr8g0381091 49.367 395 161 10 386 764 52 423 7.56e-121 371
MsaG012408 MtrunA17_Chr2g0285711 47.980 396 168 9 386 767 57 428 4.27e-120 369
MsaG012408 MtrunA17_Chr2g0312641 45.763 413 177 10 366 763 39 419 6.71e-114 354
MsaG012408 MtrunA17_Chr2g0327561 46.032 378 165 2 386 763 601 939 1.88e-107 351
MsaG012408 MtrunA17_Chr4g0030361 44.180 378 161 3 386 763 282 609 7.62e-105 336
MsaG012408 MtrunA17_Chr8g0369091 44.709 378 162 3 386 763 572 902 1.67e-103 340
MsaG012408 MtrunA17_Chr4g0032761 38.060 402 211 11 408 788 10 394 4.25e-76 253
MsaG012408 MtrunA17_Chr2g0329011 38.692 367 184 7 407 770 11 339 1.23e-75 250
MsaG012408 MtrunA17_Chr8g0338741 38.043 368 196 11 408 764 15 361 4.48e-70 237
MsaG012408 MtrunA17_Chr7g0234641 35.389 373 207 9 405 765 3 353 5.25e-67 228
MsaG012408 MtrunA17_Chr5g0428981 34.302 344 178 5 410 752 760 1056 2.02e-55 207
MsaG012408 MtrunA17_Chr4g0018201 34.012 344 179 5 410 752 756 1052 3.74e-55 206
MsaG012408 MtrunA17_Chr6g0478601 35.191 341 174 6 413 752 111 405 3.70e-54 196
MsaG012408 MtrunA17_Chr3g0135951 32.081 346 196 9 413 752 94 406 1.74e-46 174
MsaG012408 MtrunA17_Chr1g0153321 29.805 359 210 7 401 755 96 416 2.15e-44 168
MsaG012408 MtrunA17_Chr1g0187581 30.238 420 229 14 355 763 69 435 9.61e-42 160
MsaG012408 MtrunA17_Chr1g0183651 29.459 370 221 6 401 768 108 439 5.80e-41 158
MsaG012408 MtrunA17_Chr2g0299781 30.814 344 203 8 413 752 113 425 1.81e-40 156
MsaG012408 MtrunA17_Chr1g0167351 27.409 467 287 12 316 768 3 431 3.04e-40 156
MsaG012408 MtrunA17_Chr7g0261491 30.000 360 204 9 401 752 108 427 1.53e-39 154
MsaG012408 MtrunA17_Chr1g0167311 29.189 370 223 9 401 768 103 435 3.57e-39 152
MsaG012408 MtrunA17_Chr1g0197721 37.791 172 97 3 397 568 38 199 9.00e-28 118
MsaG012408 MtrunA17_Chr1g0197721 35.099 151 92 3 634 780 203 351 1.67e-13 73.9
MsaG012408 MtrunA17_Chr7g0245031 37.500 168 95 4 400 560 129 293 1.75e-26 114
MsaG012408 MtrunA17_Chr7g0245031 45.238 126 64 3 643 767 301 422 2.11e-23 104
MsaG012408 MtrunA17_Chr4g0059751 39.241 158 81 5 413 560 89 241 3.92e-26 112
MsaG012408 MtrunA17_Chr4g0059751 40.000 140 73 4 643 781 249 378 1.90e-23 103
MsaG012408 MtrunA17_Chr3g0125381 44.144 111 58 1 638 748 101 207 2.43e-24 102
MsaG012408 MtrunA17_Chr3g0125381 32.231 121 69 2 463 583 2 109 1.36e-11 65.1
MsaG012408 MtrunA17_Chr8g0351491 27.666 347 168 9 402 748 5 268 2.02e-22 98.2
MsaG012408 MtrunA17_Chr3g0140631 33.523 176 115 1 386 561 10 183 7.80e-21 94.0
MsaG012408 MtrunA17_Chr8g0379091 25.784 287 137 5 407 692 20 231 1.47e-19 93.2
MsaG012408 MtrunA17_Chr2g0284031 25.784 287 137 5 402 687 20 231 4.80e-19 91.3
MsaG012408 MtrunA17_Chr1g0205421 35.625 160 96 3 403 560 2 156 8.93e-19 90.1
MsaG012408 MtrunA17_Chr4g0013131 30.380 158 107 1 403 560 2 156 1.64e-18 89.4
MsaG012408 MtrunA17_Chr8g0353621 41.346 104 57 1 643 746 161 260 8.54e-18 84.3
MsaG012408 MtrunA17_Chr8g0353621 33.333 150 98 1 413 562 10 157 1.11e-17 84.0
MsaG012408 MtrunA17_Chr3g0107011 30.519 154 104 1 407 560 8 158 1.07e-17 87.0
MsaG012408 MtrunA17_Chr3g0114511 32.258 155 100 1 406 560 25 174 2.00e-17 85.9
MsaG012408 MtrunA17_Chr7g0244521 30.968 155 104 1 406 560 5 156 4.08e-17 85.1
MsaG012408 MtrunA17_Chr2g0286501 35.065 154 90 3 410 562 46 190 2.27e-16 84.3
MsaG012408 MtrunA17_Chr2g0304111 32.000 150 96 2 413 560 23 168 3.01e-16 82.4
MsaG012408 MtrunA17_Chr4g0074111 31.293 147 98 1 413 559 18 161 4.79e-16 81.3
MsaG012408 MtrunA17_Chr1g0188031 32.075 159 92 4 410 560 17 167 5.27e-16 81.3
MsaG012408 MtrunA17_Chr3g0107051 33.108 148 96 1 413 560 21 165 5.52e-16 81.3
MsaG012408 MtrunA17_Chr2g0302431 30.719 153 104 1 408 560 15 165 8.24e-16 80.9
MsaG012408 MtrunA17_Chr5g0432471 28.947 152 103 2 410 560 9 156 1.95e-15 79.7
MsaG012408 MtrunA17_Chr2g0284011 28.387 155 108 1 406 560 5 156 2.29e-15 79.3
MsaG012408 MtrunA17_Chr4g0001331 29.114 158 109 1 403 560 10 164 2.99e-15 79.3
MsaG012408 MtrunA17_Chr1g0150321 30.625 160 108 1 401 560 1 157 6.00e-15 77.8
MsaG012408 MtrunA17_Chr6g0453681 30.818 159 102 3 406 560 10 164 6.47e-15 78.2
MsaG012408 MtrunA17_Chr6g0486661 34.109 129 77 4 640 763 909 1034 7.27e-15 79.0
MsaG012408 MtrunA17_Chr6g0468751 30.818 159 102 3 406 560 10 164 9.02e-15 77.8
MsaG012408 MtrunA17_Chr3g0132591 38.776 147 80 3 419 564 118 255 1.26e-14 77.4
MsaG012408 MtrunA17_Chr3g0091311 32.075 159 97 4 406 560 5 156 1.56e-14 74.3
MsaG012408 MtrunA17_Chr5g0428031 27.703 148 105 1 413 560 9 154 1.74e-14 76.6
MsaG012408 MtrunA17_Chr7g0272841 32.653 147 92 3 419 560 74 218 2.51e-14 77.0
MsaG012408 MtrunA17_Chr5g0419441 31.373 153 100 3 413 564 239 387 3.28e-14 76.6
MsaG012408 MtrunA17_Chr5g0441011 29.054 148 103 1 413 560 13 158 3.83e-14 75.5
MsaG012408 MtrunA17_Chr8g0386981 32.639 144 93 2 419 560 414 555 3.99e-14 76.6
MsaG012408 MtrunA17_Chr8g0346071 27.703 148 105 1 413 560 17 162 4.33e-14 75.5
MsaG012408 MtrunA17_Chr1g0202831 30.556 144 96 2 419 560 417 558 6.97e-14 75.9
MsaG012408 MtrunA17_Chr8g0346081 26.351 148 107 1 413 560 17 162 9.15e-14 74.3
MsaG012408 MtrunA17_Chr4g0061141 32.749 171 106 5 395 560 85 251 1.83e-13 74.3
MsaG012408 MtrunA17_Chr8g0385341 33.987 153 95 3 413 561 30 180 2.08e-13 73.6
MsaG012408 MtrunA17_Chr1g0200601 34.839 155 93 4 412 561 29 180 2.86e-13 73.2
MsaG012408 MtrunA17_Chr3g0130151 32.192 146 91 3 419 560 250 391 4.21e-13 73.2
MsaG012408 MtrunA17_Chr3g0091281 30.220 182 105 6 406 572 5 179 4.33e-13 69.7
MsaG012408 MtrunA17_Chr1g0188991 23.611 360 184 12 409 763 11 284 4.56e-13 73.2
MsaG012408 MtrunA17_Chr1g0205931 32.000 150 95 3 419 563 61 208 5.40e-13 72.8
MsaG012408 MtrunA17_Chr1g0176751 34.746 118 64 4 645 760 283 389 5.64e-13 72.4
MsaG012408 MtrunA17_Chr3g0132671 29.787 188 96 5 406 560 10 194 6.38e-13 72.0
MsaG012408 MtrunA17_Chr1g0166101 28.947 152 105 2 410 560 21 170 7.21e-13 71.6
MsaG012408 MtrunA17_Chr2g0333821 28.931 159 110 1 402 560 3 158 1.09e-12 70.9
MsaG012408 MtrunA17_Chr5g0432491 31.081 148 100 1 413 560 23 168 1.09e-12 70.9
MsaG012408 MtrunA17_Chr8g0384301 31.613 155 100 4 409 560 295 446 1.79e-12 71.2
MsaG012408 MtrunA17_Chr6g0450571 30.968 155 101 4 408 560 11 161 2.50e-12 70.5
MsaG012408 MtrunA17_Chr2g0299991 28.155 206 139 5 356 560 17 214 2.71e-12 69.3
MsaG012408 MtrunA17_Chr7g0274941 34.579 107 63 3 643 746 171 273 2.95e-12 68.2
MsaG012408 MtrunA17_Chr7g0274941 28.947 152 103 3 408 557 11 159 4.10e-11 64.7
MsaG012408 MtrunA17_Chr8g0345801 31.783 129 85 2 418 546 20 145 4.82e-12 67.4
MsaG012408 MtrunA17_Chr4g0063881 28.472 144 101 1 417 560 15 156 4.86e-12 68.9
MsaG012408 MtrunA17_Chr4g0038501 27.632 152 109 1 413 564 20 170 5.01e-12 70.1
MsaG012408 MtrunA17_Chr5g0409421 27.500 160 107 4 410 567 1 153 5.96e-12 68.9
MsaG012408 MtrunA17_Chr2g0330211 30.201 149 101 2 413 560 18 164 8.30e-12 68.6
MsaG012408 MtrunA17_Chr2g0321841 27.922 154 105 3 410 560 1 151 8.49e-12 69.3
MsaG012408 MtrunA17_Chr3g0091421 29.375 160 102 4 405 560 4 156 1.03e-11 65.9
MsaG012408 MtrunA17_Chr4g0040141 32.667 150 96 4 413 560 129 275 1.06e-11 68.6
MsaG012408 MtrunA17_Chr7g0218071 31.250 176 114 5 395 566 100 272 1.09e-11 68.6
MsaG012408 MtrunA17_Chr3g0131861 31.788 151 96 5 413 560 97 243 1.21e-11 68.2
MsaG012408 MtrunA17_Chr1g0190831 27.273 154 106 3 410 560 1 151 1.28e-11 68.2
MsaG012408 MtrunA17_Chr6g0453711 29.379 177 116 6 395 566 90 262 1.36e-11 68.2
MsaG012408 MtrunA17_Chr4g0047191 31.148 122 82 1 441 560 73 194 1.72e-11 66.6
MsaG012408 MtrunA17_Chr1g0170551 32.075 106 66 2 646 751 162 261 1.95e-11 68.2
MsaG012408 MtrunA17_Chr4g0038091 27.632 152 109 1 413 564 20 170 2.16e-11 67.8
MsaG012408 MtrunA17_Chr4g0000431 28.000 150 104 3 412 560 23 169 2.21e-11 67.4
MsaG012408 MtrunA17_Chr4g0047211 31.148 122 82 1 441 560 68 189 2.32e-11 66.2
MsaG012408 MtrunA17_Chr2g0317501 31.126 151 97 5 413 560 134 280 2.80e-11 67.4
MsaG012408 MtrunA17_Chr2g0317001 30.065 153 101 4 413 564 15 162 3.32e-11 67.0
MsaG012408 MtrunA17_Chr1g0170281 29.940 167 108 5 400 561 106 268 4.53e-11 66.2
MsaG012408 MtrunA17_Chr3g0091291 35.514 107 60 3 458 560 3 104 4.70e-11 63.2
MsaG012408 MtrunA17_Chr1g0162301 30.667 150 88 4 405 546 10 151 7.02e-11 64.7
MsaG012408 MtrunA17_Chr6g0453671 28.758 153 103 2 410 560 16 164 7.77e-11 64.7
MsaG012408 MtrunA17_Chr1g0173541 32.051 156 100 3 410 561 49 202 8.59e-11 65.5
MsaG012408 MtrunA17_Chr4g0074811 31.847 157 97 5 411 561 89 241 9.81e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012408 AT3G52890.2 65.962 473 148 6 337 798 464 934 0.0 634
MsaG012408 AT3G52890.2 44.248 113 41 5 40 132 50 160 4.74e-11 67.0
MsaG012408 AT3G52890.4 65.962 473 148 6 337 798 464 934 0.0 634
MsaG012408 AT3G52890.4 44.248 113 41 5 40 132 50 160 4.74e-11 67.0
MsaG012408 AT3G52890.1 65.962 473 148 6 337 798 464 934 0.0 634
MsaG012408 AT3G52890.1 44.248 113 41 5 40 132 50 160 4.74e-11 67.0
MsaG012408 AT3G52890.3 65.962 473 148 6 337 798 464 934 0.0 634
MsaG012408 AT3G52890.3 44.248 113 41 5 40 132 50 160 4.74e-11 67.0
MsaG012408 AT2G36350.1 65.208 457 152 3 347 798 495 949 0.0 611
MsaG012408 AT2G36350.1 31.169 231 108 7 1 201 1 210 1.87e-16 84.7
MsaG012408 AT5G03640.2 57.143 546 193 10 278 798 397 926 0.0 594
MsaG012408 AT5G03640.1 57.143 546 193 10 278 798 397 926 0.0 594
MsaG012408 AT5G47750.1 60.917 458 166 6 352 798 131 586 0.0 558
MsaG012408 AT4G26610.1 58.197 488 185 10 286 769 6 478 0.0 541
MsaG012408 AT5G55910.2 58.009 462 187 6 342 798 39 498 0.0 528
MsaG012408 AT5G55910.1 58.009 462 187 6 342 798 39 498 0.0 528
MsaG012408 AT2G44830.2 54.581 513 195 11 275 765 219 715 5.69e-175 522
MsaG012408 AT2G44830.3 54.581 513 195 11 275 765 219 715 5.69e-175 522
MsaG012408 AT2G44830.1 54.581 513 195 11 275 765 219 715 5.69e-175 522
MsaG012408 AT3G27580.2 60.714 392 138 6 383 765 150 534 1.22e-166 494
MsaG012408 AT3G27580.1 60.714 392 138 6 383 765 150 534 1.22e-166 494
MsaG012408 AT3G12690.1 48.435 543 251 5 245 784 30 546 1.32e-165 492
MsaG012408 AT3G12690.3 48.435 543 251 5 245 784 30 546 1.32e-165 492
MsaG012408 AT3G12690.2 48.435 543 251 5 245 784 30 546 1.32e-165 492
MsaG012408 AT5G40030.1 61.979 384 134 8 386 765 86 461 2.60e-159 473
MsaG012408 AT1G79250.1 58.105 401 156 4 386 778 119 515 7.85e-159 473
MsaG012408 AT1G79250.3 58.105 401 156 4 386 778 119 515 7.85e-159 473
MsaG012408 AT1G79250.2 58.105 401 156 4 386 778 119 515 7.85e-159 473
MsaG012408 AT1G79250.4 58.105 401 156 4 386 778 119 515 7.85e-159 473
MsaG012408 AT1G16440.1 57.254 386 150 4 386 769 86 458 4.97e-150 449
MsaG012408 AT2G34650.1 50.370 405 162 8 368 764 38 411 3.97e-127 387
MsaG012408 AT2G26700.1 44.420 448 200 7 365 765 38 483 4.33e-127 390
MsaG012408 AT3G44610.1 53.973 365 136 7 413 757 71 423 7.28e-127 387
MsaG012408 AT5G58140.6 43.596 406 173 5 387 791 551 901 2.45e-108 353
MsaG012408 AT5G58140.7 43.596 406 173 5 387 791 551 901 2.45e-108 353
MsaG012408 AT5G58140.5 43.596 406 173 5 387 791 551 901 2.45e-108 353
MsaG012408 AT5G58140.2 43.596 406 173 5 387 791 551 901 2.45e-108 353
MsaG012408 AT5G58140.1 43.596 406 173 5 387 791 551 901 2.45e-108 353
MsaG012408 AT3G14370.1 46.094 384 165 6 388 762 61 411 5.56e-108 339
MsaG012408 AT5G58140.3 44.865 370 157 3 387 756 551 873 9.68e-106 345
MsaG012408 AT3G45780.2 41.439 403 183 4 386 788 636 985 6.47e-100 332
MsaG012408 AT3G45780.1 41.439 403 183 4 386 788 636 985 6.47e-100 332
MsaG012408 AT1G53700.1 44.648 383 173 8 388 763 66 416 7.47e-99 315
MsaG012408 AT1G51170.1 39.314 379 184 11 407 770 16 363 2.49e-75 250
MsaG012408 AT3G20830.1 39.153 378 186 11 408 770 16 364 2.74e-71 240
MsaG012408 AT4G13000.1 37.845 362 184 9 408 764 15 340 1.77e-70 236
MsaG012408 AT3G25250.1 33.753 397 224 6 402 789 6 372 2.02e-66 227
MsaG012408 AT5G62310.1 33.504 391 201 9 410 791 751 1091 2.69e-54 204
MsaG012408 AT1G45160.2 33.744 406 204 10 408 798 665 1020 2.99e-54 203
MsaG012408 AT1G45160.1 35.655 359 177 8 408 762 665 973 4.15e-54 203
MsaG012408 AT1G48490.3 34.971 346 172 6 408 752 823 1116 5.00e-53 200
MsaG012408 AT1G48490.2 34.971 346 172 6 408 752 823 1116 5.00e-53 200
MsaG012408 AT1G48490.1 34.971 346 172 6 408 752 823 1116 5.00e-53 200
MsaG012408 AT1G48490.4 34.971 346 172 6 408 752 824 1117 5.53e-53 200
MsaG012408 AT1G30640.3 31.565 377 213 11 398 767 12 350 7.52e-48 177
MsaG012408 AT1G30640.2 32.075 371 207 11 404 767 111 443 9.43e-48 179
MsaG012408 AT1G30640.1 32.075 371 207 11 404 767 111 443 9.43e-48 179
MsaG012408 AT5G09890.1 32.584 356 200 8 401 752 90 409 2.90e-47 176
MsaG012408 AT5G09890.2 32.584 356 200 8 401 752 90 409 2.96e-47 176
MsaG012408 AT4G14350.3 30.749 374 212 10 401 768 107 439 5.37e-43 164
MsaG012408 AT1G03920.2 31.183 372 212 8 401 768 12 343 7.57e-43 162
MsaG012408 AT4G14350.2 30.749 374 212 10 401 768 107 439 7.89e-43 164
MsaG012408 AT4G14350.1 30.749 374 212 10 401 768 107 439 7.89e-43 164
MsaG012408 AT4G14350.4 30.749 374 212 10 401 768 107 439 7.89e-43 164
MsaG012408 AT1G03920.1 31.117 376 207 9 401 768 125 456 9.56e-43 164
MsaG012408 AT1G03920.3 31.117 376 207 9 401 768 125 456 9.56e-43 164
MsaG012408 AT4G33080.2 29.609 358 214 9 401 752 82 407 1.71e-42 162
MsaG012408 AT4G33080.1 29.050 358 216 7 401 752 82 407 1.77e-42 162
MsaG012408 AT2G20470.3 30.108 372 215 8 401 768 112 442 2.23e-42 162
MsaG012408 AT2G20470.2 29.839 372 216 7 401 768 112 442 3.22e-42 163
MsaG012408 AT2G20470.1 29.839 372 216 7 401 768 112 442 3.22e-42 163
MsaG012408 AT3G23310.1 30.481 374 215 12 401 768 108 442 4.71e-41 159
MsaG012408 AT2G19400.1 31.594 345 201 9 413 752 105 419 1.96e-39 154
MsaG012408 AT5G58140.4 44.275 131 73 0 387 517 551 681 1.42e-31 132
MsaG012408 AT5G04510.2 39.506 162 91 2 407 568 38 192 6.31e-28 117
MsaG012408 AT5G04510.2 35.821 134 80 3 634 763 196 327 3.32e-17 85.1
MsaG012408 AT5G04510.3 39.506 162 91 2 407 568 38 192 7.51e-28 115
MsaG012408 AT5G04510.1 39.506 162 91 2 407 568 38 192 1.03e-27 118
MsaG012408 AT5G04510.1 35.821 134 80 3 634 763 196 327 2.77e-17 86.3
MsaG012408 AT3G08730.1 46.094 128 63 4 641 767 285 407 1.06e-27 117
MsaG012408 AT3G08730.1 39.103 156 91 3 406 560 127 279 1.78e-26 114
MsaG012408 AT3G08730.2 46.094 128 63 4 641 767 285 407 1.06e-27 117
MsaG012408 AT3G08730.2 39.103 156 91 3 406 560 127 279 1.78e-26 114
MsaG012408 AT3G10540.1 38.372 172 96 3 397 568 32 193 3.53e-27 116
MsaG012408 AT3G10540.1 36.567 134 79 3 634 763 197 328 9.43e-18 87.8
MsaG012408 AT3G17850.1 41.558 154 88 1 413 566 882 1033 3.83e-27 119
MsaG012408 AT3G17850.1 44.144 111 60 2 643 752 1067 1176 6.22e-23 105
MsaG012408 AT3G08720.1 39.103 156 91 3 406 560 133 285 5.97e-27 115
MsaG012408 AT3G08720.1 48.673 113 54 3 641 752 291 400 8.40e-26 112
MsaG012408 AT3G08720.3 39.103 156 91 3 406 560 133 285 5.97e-27 115
MsaG012408 AT3G08720.3 48.673 113 54 3 641 752 291 400 8.40e-26 112
MsaG012408 AT3G08720.4 39.103 156 91 3 406 560 133 285 5.97e-27 115
MsaG012408 AT3G08720.4 48.673 113 54 3 641 752 291 400 8.40e-26 112
MsaG012408 AT3G08720.2 39.103 156 91 3 406 560 133 285 5.97e-27 115
MsaG012408 AT3G08720.2 48.673 113 54 3 641 752 291 400 8.40e-26 112
MsaG012408 AT2G45490.1 45.045 111 56 3 637 747 168 273 1.85e-20 93.2
MsaG012408 AT2G45490.1 35.256 156 97 2 410 564 19 171 1.67e-19 90.1
MsaG012408 AT2G20050.2 40.870 115 64 2 643 755 931 1043 6.60e-20 95.9
MsaG012408 AT2G20050.1 40.870 115 64 2 643 755 934 1046 6.96e-20 95.9
MsaG012408 AT5G18700.1 37.748 151 86 3 410 560 1 143 8.89e-20 95.5
MsaG012408 AT2G45490.2 35.256 156 97 2 410 564 19 171 2.02e-19 89.4
MsaG012408 AT2G45490.2 43.182 88 49 1 637 724 168 254 5.80e-15 76.3
MsaG012408 AT5G45810.1 26.132 287 136 5 402 687 17 228 3.82e-19 92.0
MsaG012408 AT5G45820.1 32.484 157 103 1 404 560 3 156 9.06e-19 90.5
MsaG012408 AT4G18700.1 25.979 281 132 5 408 687 21 226 1.61e-18 90.1
MsaG012408 AT4G32830.1 26.562 320 156 8 413 732 31 271 3.04e-18 86.7
MsaG012408 AT2G25880.1 36.242 149 93 1 413 561 25 171 6.35e-18 85.5
MsaG012408 AT2G25880.1 38.889 108 62 1 640 747 173 276 4.70e-17 82.8
MsaG012408 AT2G25880.4 36.242 149 93 1 413 561 38 184 7.71e-18 85.5
MsaG012408 AT2G25880.4 39.252 107 61 1 640 746 186 288 3.83e-17 83.6
MsaG012408 AT1G12680.1 35.714 154 89 3 417 569 111 255 1.47e-17 87.0
MsaG012408 AT2G25880.3 31.343 201 116 3 361 561 54 232 1.52e-17 85.5
MsaG012408 AT2G25880.3 39.252 107 61 1 640 746 234 336 1.35e-16 82.8
MsaG012408 AT5G25110.1 30.818 159 107 1 402 560 32 187 1.71e-17 86.7
MsaG012408 AT2G25880.2 39.252 107 61 1 640 746 141 243 2.86e-17 82.8
MsaG012408 AT5G01810.1 31.013 158 106 1 403 560 2 156 3.51e-17 85.5
MsaG012408 AT5G01810.2 31.013 158 106 1 403 560 2 156 3.51e-17 85.5
MsaG012408 AT5G10930.1 34.000 150 93 4 413 560 12 157 3.63e-17 85.5
MsaG012408 AT1G29230.1 32.468 154 101 1 407 560 68 218 5.43e-17 85.5
MsaG012408 AT5G01810.3 31.013 158 106 1 403 560 2 156 6.30e-17 84.0
MsaG012408 AT2G25090.1 34.000 150 94 3 413 560 15 161 1.47e-16 84.0
MsaG012408 AT4G14580.1 32.051 156 103 2 406 560 14 167 1.81e-16 83.2
MsaG012408 AT1G54960.1 32.680 153 96 3 413 560 68 218 1.99e-16 84.0
MsaG012408 AT1G54960.2 32.680 153 96 3 413 560 68 218 1.99e-16 84.0
MsaG012408 AT2G34180.1 30.120 166 113 1 396 561 40 202 4.18e-16 82.4
MsaG012408 AT3G17510.1 31.169 154 104 1 407 560 14 165 4.26e-16 82.0
MsaG012408 AT4G24400.1 30.667 150 98 2 413 560 9 154 4.81e-16 82.0
MsaG012408 AT5G57630.2 29.936 157 103 2 406 560 5 156 6.27e-16 81.3
MsaG012408 AT5G57630.1 29.936 157 103 2 406 560 5 156 6.43e-16 81.3
MsaG012408 AT4G24400.2 30.667 150 98 2 413 560 9 154 7.56e-16 81.3
MsaG012408 AT1G09000.1 32.680 153 96 3 413 560 69 219 1.09e-15 81.6
MsaG012408 AT1G09000.2 32.680 153 96 3 413 560 69 219 1.22e-15 81.6
MsaG012408 AT2G30360.1 24.405 336 174 9 413 747 21 277 1.28e-15 80.5
MsaG012408 AT3G29160.3 32.026 153 98 2 410 560 17 165 1.91e-15 79.3
MsaG012408 AT3G23000.1 33.750 160 87 4 410 560 22 171 2.36e-15 79.7
MsaG012408 AT3G06030.1 34.014 147 90 3 419 560 74 218 2.41e-15 80.5
MsaG012408 AT3G29160.1 32.026 153 98 2 410 560 17 165 3.32e-15 79.7
MsaG012408 AT3G29160.2 32.026 153 98 2 410 560 17 165 3.32e-15 79.7
MsaG012408 AT3G01090.3 32.680 153 97 2 410 560 16 164 4.17e-15 79.3
MsaG012408 AT3G01090.1 32.680 153 97 2 410 560 16 164 4.17e-15 79.3
MsaG012408 AT3G01090.2 32.680 153 97 2 410 560 39 187 4.56e-15 79.3
MsaG012408 AT1G30270.1 29.054 148 103 1 413 560 31 176 1.04e-14 78.2
MsaG012408 AT2G26980.1 29.730 148 102 1 413 560 14 159 1.21e-14 77.0
MsaG012408 AT5G21326.1 23.313 326 163 7 413 732 13 257 1.25e-14 77.4
MsaG012408 AT2G26980.3 29.730 148 102 1 413 560 14 159 1.31e-14 77.4
MsaG012408 AT1G30270.2 29.054 148 103 1 413 560 31 176 1.43e-14 77.4
MsaG012408 AT2G26980.4 29.730 148 102 1 413 560 24 169 1.50e-14 77.4
MsaG012408 AT4G24100.2 24.042 287 144 8 402 687 22 235 2.09e-14 77.8
MsaG012408 AT4G24100.1 24.042 287 144 8 402 687 22 235 2.14e-14 77.8
MsaG012408 AT4G30960.1 33.108 148 96 1 413 560 24 168 2.65e-14 76.6
MsaG012408 AT2G26980.5 29.730 148 102 1 413 560 14 159 2.74e-14 76.3
MsaG012408 AT4G24100.4 24.042 287 144 8 402 687 38 251 2.82e-14 77.4
MsaG012408 AT4G04720.2 32.484 157 96 4 411 561 78 230 2.92e-14 77.0
MsaG012408 AT4G04720.2 32.381 105 64 3 647 749 241 340 4.04e-11 67.0
MsaG012408 AT4G04720.1 32.484 157 96 4 411 561 78 230 2.92e-14 77.0
MsaG012408 AT4G04720.1 32.381 105 64 3 647 749 241 340 4.04e-11 67.0
MsaG012408 AT4G24100.3 24.042 287 144 8 402 687 38 251 3.03e-14 77.4
MsaG012408 AT2G26980.2 29.730 148 102 1 413 560 14 159 3.17e-14 74.3
MsaG012408 AT1G35670.1 30.622 209 126 6 412 613 25 221 3.37e-14 76.6
MsaG012408 AT5G39440.1 31.373 153 99 2 410 560 16 164 3.67e-14 76.3
MsaG012408 AT1G69220.1 27.317 205 133 3 373 564 196 397 7.65e-14 76.3
MsaG012408 AT2G41860.1 33.987 153 95 3 413 561 54 204 1.02e-13 75.1
MsaG012408 AT2G41860.2 33.987 153 95 3 413 561 54 204 1.02e-13 75.1
MsaG012408 AT5G58380.1 29.861 144 98 1 417 560 16 156 1.19e-13 74.7
MsaG012408 AT5G14720.1 32.258 155 99 4 408 560 11 161 1.38e-13 75.1
MsaG012408 AT5G14720.2 32.258 155 99 4 408 560 11 161 1.38e-13 75.1
MsaG012408 AT1G63700.1 31.507 146 96 2 417 560 404 547 1.39e-13 75.5
MsaG012408 AT1G63700.2 31.507 146 96 2 417 560 404 547 1.39e-13 75.5
MsaG012408 AT4G09570.1 30.144 209 127 6 412 613 24 220 1.53e-13 74.3
MsaG012408 AT1G53570.7 33.103 145 91 4 419 560 220 361 1.63e-13 74.3
MsaG012408 AT1G53570.6 33.103 145 91 4 419 560 220 361 1.65e-13 74.3
MsaG012408 AT1G53570.1 33.103 145 91 4 419 560 220 361 1.79e-13 74.7
MsaG012408 AT1G53570.4 33.103 145 91 4 419 560 220 361 1.85e-13 74.7
MsaG012408 AT1G53570.2 33.103 145 91 4 419 560 220 361 1.86e-13 74.3
MsaG012408 AT1G53570.3 33.103 145 91 4 419 560 220 361 1.86e-13 74.3
MsaG012408 AT1G01140.3 28.571 168 113 2 393 560 4 164 3.32e-13 73.2
MsaG012408 AT1G01140.1 28.571 168 113 2 393 560 4 164 3.79e-13 72.8
MsaG012408 AT1G01140.2 28.571 168 113 2 393 560 4 164 3.86e-13 72.8
MsaG012408 AT1G48260.1 31.081 148 100 1 413 560 11 156 4.09e-13 72.8
MsaG012408 AT5G28290.3 28.289 152 107 2 410 560 1 151 4.18e-13 73.2
MsaG012408 AT5G28290.1 28.289 152 107 2 410 560 1 151 4.23e-13 73.2
MsaG012408 AT5G28290.2 28.289 152 107 2 410 560 1 151 4.23e-13 73.2
MsaG012408 AT2G38490.1 33.333 159 96 5 413 567 28 180 4.86e-13 72.4
MsaG012408 AT5G39420.1 32.941 170 107 5 395 560 85 251 5.99e-13 72.8
MsaG012408 AT1G70430.3 32.903 155 98 4 408 560 11 161 9.73e-13 72.4
MsaG012408 AT1G70430.4 32.903 155 98 4 408 560 11 161 1.11e-12 72.0
MsaG012408 AT1G70430.1 32.903 155 98 4 408 560 11 161 1.13e-12 72.0
MsaG012408 AT3G04810.2 26.974 152 109 2 410 560 1 151 1.15e-12 72.0
MsaG012408 AT3G04810.1 26.974 152 109 2 410 560 1 151 1.15e-12 72.0
MsaG012408 AT3G04810.3 26.974 152 109 2 410 560 1 151 1.15e-12 72.0
MsaG012408 AT1G69220.2 30.625 160 105 3 405 564 217 370 3.77e-12 70.5
MsaG012408 AT5G35410.2 27.586 145 101 2 417 560 15 156 3.92e-12 69.3
MsaG012408 AT3G61960.2 30.882 136 87 3 413 546 10 140 5.00e-12 69.7
MsaG012408 AT3G61960.1 30.882 136 87 3 413 546 10 140 5.05e-12 70.1
MsaG012408 AT1G32320.1 32.867 143 86 3 419 560 54 187 5.49e-12 68.2
MsaG012408 AT3G10660.2 30.851 188 112 8 385 561 156 336 6.94e-12 69.7
MsaG012408 AT3G10660.1 30.851 188 112 8 385 561 156 336 6.94e-12 69.7
MsaG012408 AT2G17290.1 32.335 167 106 5 405 567 76 239 7.31e-12 69.3
MsaG012408 AT2G17290.2 32.335 167 106 5 405 567 76 239 7.31e-12 69.3
MsaG012408 AT4G14480.1 30.519 154 104 2 408 560 10 161 7.97e-12 68.9
MsaG012408 AT1G50700.3 30.526 190 119 6 378 561 41 223 8.17e-12 68.9
MsaG012408 AT1G50700.1 30.526 190 119 6 378 561 41 223 8.51e-12 68.9
MsaG012408 AT5G35410.1 27.586 145 101 2 417 560 15 156 9.20e-12 68.6
MsaG012408 AT4G35310.2 30.952 168 107 5 405 567 88 251 1.00e-11 68.9
MsaG012408 AT4G35310.1 30.952 168 107 5 405 567 88 251 1.00e-11 68.9
MsaG012408 AT1G53050.2 31.788 151 96 5 413 560 134 280 1.06e-11 68.9
MsaG012408 AT1G53050.1 31.788 151 96 5 413 560 134 280 1.06e-11 68.9
MsaG012408 AT1G50700.2 30.526 190 119 6 378 561 41 223 1.43e-11 68.2
MsaG012408 AT3G15220.1 31.169 154 100 4 412 564 14 162 1.54e-11 68.6
MsaG012408 AT3G07980.1 26.974 152 110 1 413 564 20 170 1.70e-11 68.9
MsaG012408 AT3G07980.2 26.974 152 110 1 413 564 20 170 1.72e-11 68.6
MsaG012408 AT1G61950.1 33.548 155 94 5 413 561 98 249 1.95e-11 67.8
MsaG012408 AT5G01820.1 31.690 142 94 1 419 560 28 166 3.18e-11 67.0
MsaG012408 AT4G10010.2 32.895 152 93 6 413 560 156 302 3.64e-11 67.4
MsaG012408 AT1G54510.4 26.623 154 107 3 410 560 1 151 3.70e-11 67.0
MsaG012408 AT1G54510.2 26.623 154 107 3 410 560 1 151 3.70e-11 67.0
MsaG012408 AT1G54510.1 26.623 154 107 3 410 560 1 151 3.70e-11 67.0
MsaG012408 AT1G54510.3 26.623 154 107 3 410 560 1 151 3.70e-11 67.0
MsaG012408 AT4G21940.2 33.333 105 63 3 647 749 263 362 4.15e-11 67.0
MsaG012408 AT1G08650.1 33.333 108 64 3 644 748 172 274 4.27e-11 65.1
MsaG012408 AT4G21940.1 33.333 105 63 3 647 749 263 362 4.36e-11 66.6
MsaG012408 AT4G21940.3 33.333 105 63 3 647 749 263 362 4.38e-11 66.6
MsaG012408 AT2G17890.1 29.469 207 117 8 419 612 114 304 5.56e-11 66.6
MsaG012408 AT5G23580.1 33.121 157 99 3 412 564 21 175 7.22e-11 65.9
MsaG012408 AT1G73500.1 31.034 145 89 4 419 560 53 189 8.87e-11 64.3

Find 165 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCCAAGTTTCGCGATTT+TGG 0.148878 3:-23802799 MsaT012408.1:CDS
CGCAACAAAGTTCTCTTAAA+AGG 0.205140 3:-23806241 MsaT012408.1:CDS
CCTTCTTTGAAGGCCTCAAC+TGG 0.257721 3:-23802852 MsaT012408.1:CDS
GTTTATCTTGCAGAACTAAT+TGG 0.264923 3:-23805159 MsaT012408.1:CDS
AGAGCTTAGTCGTAGTAATA+TGG 0.275471 3:+23805004 None:intergenic
CCGTCTCAGGCTTCGGGAAT+TGG 0.276728 3:-23806203 MsaT012408.1:CDS
CGTGAACTTCCTTAAGAAAA+AGG 0.277002 3:-23805664 MsaT012408.1:CDS
TGGAACTAGTGCTCCATCTA+TGG 0.306658 3:-23802779 MsaT012408.1:CDS
TAAGCTCTCTTGCTTGGTTA+TGG 0.306787 3:-23804989 MsaT012408.1:CDS
ACTTAAATTTGAGGCACTTT+AGG 0.314537 3:-23805218 MsaT012408.1:CDS
CCATAACTTTCAGTGCAAAA+AGG 0.316784 3:+23805127 None:intergenic
GTTCCTACAAATCAGGAAAA+AGG 0.319893 3:-23806346 MsaT012408.1:CDS
AATCGATTAGGTTCGATAAA+AGG 0.321850 3:-23802898 MsaT012408.1:CDS
TCCTTCTGTGCAGCCATAGA+TGG 0.323977 3:+23802766 None:intergenic
AAGTTCACGTTATTGAATAT+TGG 0.345524 3:+23805678 None:intergenic
GGAGAATGCAAATGATTTAG+AGG 0.354434 3:-23802746 MsaT012408.1:CDS
GTTTGTCCGTCTCAGGCTTC+GGG 0.361917 3:-23806209 MsaT012408.1:CDS
CTCAAGCCTTAGTACATGTT+TGG 0.363903 3:-23805706 MsaT012408.1:CDS
AGTTTGTCCGTCTCAGGCTT+CGG 0.364531 3:-23806210 MsaT012408.1:CDS
GTTTGTAGCGTTTGCTTGCT+AGG 0.366839 3:+23805876 None:intergenic
TTAACTCAATTAATGTTAGT+AGG 0.372455 3:-23805503 MsaT012408.1:CDS
TTCTTTGCGGCATCTGCATC+GGG 0.378589 3:+23803363 None:intergenic
GATAATGTATCATCATTTGA+TGG 0.378789 3:+23803018 None:intergenic
TCGGAGAGCCTTAAGTTTCC+AGG 0.381408 3:-23802985 MsaT012408.1:CDS
GCTCCTATTCTATTGTCTCC+CGG 0.388519 3:-23803264 MsaT012408.1:CDS
TTCATGCAAGAGATTTGATC+AGG 0.391727 3:-23802945 MsaT012408.1:CDS
GATCAGGGGATTGTTGATAA+AGG 0.391927 3:-23802929 MsaT012408.1:CDS
CAGTTCTTCAATGCCGGATA+AGG 0.400698 3:-23805799 MsaT012408.1:CDS
AAACAGCATCCCTTCTTTGA+AGG 0.402283 3:-23802862 MsaT012408.1:CDS
CATGTGAGATAGTGGAATAC+AGG 0.405170 3:-23806418 MsaT012408.1:CDS
AAAATCAAAATCGAAGGAAA+AGG 0.406181 3:-23805409 MsaT012408.1:CDS
AGTTCCAAAATCGCGAAACT+TGG 0.408752 3:+23802795 None:intergenic
GAATATAGTGTAGGAAGAAA+TGG 0.410692 3:+23805027 None:intergenic
ATCATTTGATGGACCTTTGA+AGG 0.413604 3:+23803029 None:intergenic
GATTAAAGTTTGTCCGTCTC+AGG 0.419899 3:-23806216 MsaT012408.1:CDS
TTTCTTTGCGGCATCTGCAT+CGG 0.420081 3:+23803362 None:intergenic
AGTGCCTGCTTCAAACTAAC+AGG 0.422205 3:+23806170 None:intergenic
CTCCTATTCTATTGTCTCCC+GGG 0.422640 3:-23803263 MsaT012408.1:CDS
TGAGGCACTTTAGGCTGATA+AGG 0.425604 3:-23805209 MsaT012408.1:CDS
AGTAGTTGTTCCTACAAATC+AGG 0.427686 3:-23806353 MsaT012408.1:CDS
GTTTGCTTGCTAGGTGGAAC+AGG 0.428440 3:+23805885 None:intergenic
GAACAGGAACAATCTGATCT+TGG 0.433741 3:+23805901 None:intergenic
AAAACCTCCAATCCTTGCTC+AGG 0.437304 3:-23803342 MsaT012408.1:CDS
TGAGACGGACAAACTTTAAT+CGG 0.438910 3:+23806218 None:intergenic
CATCTCTCAGGCATCAGAAA+TGG 0.441355 3:-23806135 MsaT012408.1:CDS
AAGGATCCTGAAAATCGATT+AGG 0.446350 3:-23802910 MsaT012408.1:CDS
GAAGATGGTTTGACTAACAT+TGG 0.447639 3:+23803387 None:intergenic
GCTGTAGATTGGTGGACTTT+CGG 0.448197 3:-23803087 MsaT012408.1:CDS
CTTGCATGAAAACTGACTAT+AGG 0.448357 3:+23802958 None:intergenic
CCTTGAGTATTTGCACATGA+TGG 0.456761 3:-23803511 MsaT012408.1:CDS
TTGGTTATGGAGTATTGTCC+AGG 0.460122 3:-23804976 MsaT012408.1:CDS
AATTAGTTCTGCAAGATAAA+CGG 0.460739 3:+23805161 None:intergenic
TACGACTAAGCTCTCTTGCT+TGG 0.462506 3:-23804995 MsaT012408.1:CDS
GTTCCAAAATCGCGAAACTT+GGG 0.464333 3:+23802796 None:intergenic
AAGCACGAAACTTGCCAATC+CGG 0.464839 3:+23803288 None:intergenic
TAGCAATACATGTGAGATAG+TGG 0.465504 3:-23806426 MsaT012408.1:CDS
TAACTCAATTAATGTTAGTA+GGG 0.466488 3:-23805502 MsaT012408.1:CDS
AGTAGTTTCAACAAGGAGAA+TGG 0.472113 3:-23805603 MsaT012408.1:CDS
CCTAGTTCTAGCAATGATAG+TGG 0.472374 3:-23805741 MsaT012408.1:CDS
TAGAGGATTGTGCATCTCTC+AGG 0.474171 3:-23806147 MsaT012408.1:CDS
TATGTCCATCTTCGCGTACT+AGG 0.475120 3:+23803454 None:intergenic
CAAGATTTACTCGACGTAGT+AGG 0.475863 3:+23805825 None:intergenic
ACACCCTTTCTGTCTCCAAC+CGG 0.476097 3:-23803307 MsaT012408.1:CDS
AGTTTGAAGCAGGCACTTAG+AGG 0.481860 3:-23806164 MsaT012408.1:CDS
GCACGGTCTAACTCCTTCGT+TGG 0.485875 3:-23803162 MsaT012408.1:CDS
GGCAAAATCTCGAAAGATGA+AGG 0.485968 3:-23803241 MsaT012408.1:CDS
TAGGAGTACCTGGAAACTTA+AGG 0.486452 3:+23802977 None:intergenic
CTTTCTGTCTCCAACCGGAT+TGG 0.486624 3:-23803302 MsaT012408.1:CDS
CCAGTTGAGGCCTTCAAAGA+AGG 0.487068 3:+23802852 None:intergenic
ATGGATGATCCAACATTTGA+AGG 0.487176 3:+23805046 None:intergenic
CGAGAAAGTGTAGATATCTC+TGG 0.489609 3:+23806023 None:intergenic
AAGCTTGTTGCATTGACGAC+AGG 0.490107 3:+23805951 None:intergenic
TCGCGAAACTTGGGGAGCTC+CGG 0.490812 3:+23802805 None:intergenic
AGCCCCTGAGCAAGGATTGG+AGG 0.492521 3:+23803338 None:intergenic
GACATGGAAACGCTGTAGAT+TGG 0.493784 3:-23803098 MsaT012408.1:CDS
AATATCCTAGTACGCGAAGA+TGG 0.496440 3:-23803459 MsaT012408.1:CDS
TTGTCTCAGTTCTTCAATGC+CGG 0.496819 3:-23805805 MsaT012408.1:CDS
GCCTCAACTGGGCTCTAATA+CGG 0.497805 3:-23802840 MsaT012408.1:CDS
TCCATCTATGGCTGCACAGA+AGG 0.498516 3:-23802767 MsaT012408.1:CDS
CTGATAAGGAAGCTTGGTAG+TGG 0.502190 3:-23805195 MsaT012408.1:CDS
AACAGGAACAATCTGATCTT+GGG 0.502833 3:+23805902 None:intergenic
GAACTCGATATCACTACATC+GGG 0.503785 3:+23805993 None:intergenic
AGCATGGTAACTTAAATTTG+AGG 0.507182 3:-23805227 MsaT012408.1:CDS
GCCCCGGGAGACAATAGAAT+AGG 0.508020 3:+23803261 None:intergenic
GTGTAGATATCTCTGGCACT+AGG 0.508864 3:+23806030 None:intergenic
GAGCTTAGTCGTAGTAATAT+GGG 0.509342 3:+23805005 None:intergenic
ACTAGCCCCTGAGCAAGGAT+TGG 0.510788 3:+23803335 None:intergenic
CTTCAATGCCGGATAAGGAC+CGG 0.517529 3:-23805794 MsaT012408.1:CDS
AAATCAAAATCGAAGGAAAA+GGG 0.520151 3:-23805408 MsaT012408.1:CDS
AAGAGAGATCCTTCAAATGT+TGG 0.520430 3:-23805055 MsaT012408.1:CDS
TGATTTGAACTGCACGGAGA+TGG 0.522640 3:+23805537 None:intergenic
TCTGACCTCTAGCAATTCCT+CGG 0.523371 3:+23805854 None:intergenic
AATACGGTGTGCGGCACCAC+CGG 0.523412 3:-23802824 MsaT012408.1:CDS
CTTCTTTGAAGGCCTCAACT+GGG 0.523669 3:-23802851 MsaT012408.1:CDS
GGAGCCTGTTAGTTTGAAGC+AGG 0.525112 3:-23806174 MsaT012408.1:CDS
TATGGAAAGACTCCCTTCAA+AGG 0.526777 3:-23803042 MsaT012408.1:CDS
CTGAAATTCAAACTAAAACC+AGG 0.528779 3:+23805468 None:intergenic
CGAAACTTGGGGAGCTCCGG+TGG 0.530434 3:+23802808 None:intergenic
GCATCTGCATCGGGTGAAGA+TGG 0.530836 3:+23803372 None:intergenic
ACATGTCAAAACACTCGAGA+TGG 0.531457 3:-23805275 MsaT012408.1:CDS
AACATATGAATATCTTGCTC+CGG 0.532760 3:-23803139 MsaT012408.1:CDS
CCACTATCATTGCTAGAACT+AGG 0.538741 3:+23805741 None:intergenic
AGTAGGGATTCAAGTAAACC+TGG 0.539458 3:-23805486 MsaT012408.1:CDS
TCAACTACAAGCTGTGGAAG+TGG 0.540222 3:+23803195 None:intergenic
GAGTTAGACCGTGCATTGGT+AGG 0.541228 3:+23803171 None:intergenic
AGTGAAGAGAGCAATCTTAG+TGG 0.541738 3:-23805324 MsaT012408.1:CDS
TTTAGGCTGATAAGGAAGCT+TGG 0.543262 3:-23805201 MsaT012408.1:CDS
TCATTTGATGGACCTTTGAA+GGG 0.546753 3:+23803030 None:intergenic
CTTGAGTATTTGCACATGAT+GGG 0.550096 3:-23803510 MsaT012408.1:CDS
CAATCCGGTTGGAGACAGAA+AGG 0.550974 3:+23803303 None:intergenic
CAGTTGAGGCCTTCAAAGAA+GGG 0.554044 3:+23802853 None:intergenic
TACATTATCAAATGTTGTGT+CGG 0.554976 3:-23803004 MsaT012408.1:CDS
GGCTGGTACAGTAAAGAAGT+TGG 0.557473 3:-23806063 MsaT012408.1:CDS
AAACCTCCAATCCTTGCTCA+GGG 0.562220 3:-23803341 MsaT012408.1:CDS
ATGGAAACGCTGTAGATTGG+TGG 0.562974 3:-23803095 MsaT012408.1:CDS
CATGCAAGAGATTTGATCAG+GGG 0.564160 3:-23802943 MsaT012408.1:CDS
GTAATATGGGAATATAGTGT+AGG 0.564957 3:+23805018 None:intergenic
CCATCATGTGCAAATACTCA+AGG 0.565740 3:+23803511 None:intergenic
TCTAGCAATGATAGTGGAGT+GGG 0.567828 3:-23805735 MsaT012408.1:CDS
TTCAATGCCGGATAAGGACC+GGG 0.572791 3:-23805793 MsaT012408.1:CDS
TCATCAAGAGTATCAGAGGC+TGG 0.576700 3:-23806080 MsaT012408.1:CDS
AAACTGACTATAGGAGTACC+TGG 0.581665 3:+23802967 None:intergenic
AAGCTTGGTAGTGGAGACAT+TGG 0.583300 3:-23805186 MsaT012408.1:CDS
TGTAGATATCTCTGGCACTA+GGG 0.585695 3:+23806031 None:intergenic
AGCACATGCAGATCACCGCC+TGG 0.586843 3:+23804958 None:intergenic
AATCCGGTTGGAGACAGAAA+GGG 0.591341 3:+23803304 None:intergenic
GCTTAACAGAAATGACAACT+AGG 0.592360 3:-23805932 MsaT012408.1:CDS
CGCTACTAGTAGTTTCAACA+AGG 0.593597 3:-23805610 MsaT012408.1:CDS
TCATGCAAGAGATTTGATCA+GGG 0.596246 3:-23802944 MsaT012408.1:CDS
ATGCTATGATTTGAACTGCA+CGG 0.599211 3:+23805531 None:intergenic
ACGAAACTTGCCAATCCGGT+TGG 0.599224 3:+23803292 None:intergenic
ATGCAACTAGCCCCTGAGCA+AGG 0.600007 3:+23803330 None:intergenic
TTCCAAAATCGCGAAACTTG+GGG 0.602237 3:+23802797 None:intergenic
TTCTAGCAATGATAGTGGAG+TGG 0.602696 3:-23805736 MsaT012408.1:CDS
CAGCTCATCAAGAGTATCAG+AGG 0.603920 3:-23806084 MsaT012408.1:CDS
TCCTATTCTATTGTCTCCCG+GGG 0.604566 3:-23803262 MsaT012408.1:CDS
GAGATTAAAAGTACATCTAG+AGG 0.606803 3:-23806281 MsaT012408.1:CDS
TGCGACAGAAGCAAACATAC+AGG 0.607992 3:-23804936 MsaT012408.1:CDS
GTAGGCTCAACTACAAGCTG+TGG 0.608343 3:+23803189 None:intergenic
CATGTCAAAACACTCGAGAT+GGG 0.608358 3:-23805274 MsaT012408.1:CDS
TGAACTCGATATCACTACAT+CGG 0.608910 3:+23805992 None:intergenic
GCTGACATAGCTGCTCAAGT+TGG 0.612275 3:-23803219 MsaT012408.1:CDS
CCGGAGATCATCAAAAGTGA+GGG 0.616865 3:-23803120 MsaT012408.1:CDS
GAAGGAGTTAGACCGTGCAT+TGG 0.619839 3:+23803167 None:intergenic
TGTATATCGAGATCTAAAGC+CGG 0.625042 3:-23803484 MsaT012408.1:CDS
ATCATCAAAAGTGAGGGACA+TGG 0.626030 3:-23803114 MsaT012408.1:CDS
CCAATTCCCGAAGCCTGAGA+CGG 0.626238 3:+23806203 None:intergenic
ATGTGAGATAGTGGAATACA+GGG 0.628803 3:-23806417 MsaT012408.1:CDS
TCCGGAGATCATCAAAAGTG+AGG 0.628843 3:-23803121 MsaT012408.1:CDS
TGTAGCGTTTGCTTGCTAGG+TGG 0.636391 3:+23805879 None:intergenic
CATCATGTGCAAATACTCAA+GGG 0.648325 3:+23803512 None:intergenic
CGTGCGATTCAACAGCAGCA+TGG 0.649464 3:-23805243 MsaT012408.1:CDS
CAAGCAAACGCTACAAACCG+AGG 0.658561 3:-23805871 MsaT012408.1:CDS
TAGTTGAGCCTACCAATGCA+CGG 0.658606 3:-23803179 MsaT012408.1:CDS
GGCTTCGGGAATTGGCATCG+CGG 0.668968 3:-23806195 MsaT012408.1:CDS
ACTACTAGTAGCGCAGCTTG+AGG 0.673996 3:+23805620 None:intergenic
ACAAACCGAGGAATTGCTAG+AGG 0.675476 3:-23805859 MsaT012408.1:CDS
CTATCATTGCTAGAACTAGG+TGG 0.677249 3:+23805744 None:intergenic
ATATTCATATGTTCCAACGA+AGG 0.681950 3:+23803149 None:intergenic
TTGTAGGAACAACTACTCTG+AGG 0.686360 3:+23806359 None:intergenic
CTGGGCTCTAATACGGTGTG+CGG 0.688622 3:-23802833 MsaT012408.1:CDS
AACCTCCAATCCTTGCTCAG+GGG 0.694679 3:-23803340 MsaT012408.1:CDS
ACCGTATTAGAGCCCAGTTG+AGG 0.696795 3:+23802839 None:intergenic
GTTATGGAGTATTGTCCAGG+CGG 0.701926 3:-23804973 MsaT012408.1:CDS
CTTAGTGGTTCGAATCGCAG+TGG 0.709666 3:-23805309 MsaT012408.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 23802711 23806459 23802711 ID=MsaG012408
Chr3 mRNA 23802711 23806459 23802711 ID=MsaT012408.1;Parent=MsaG012408
Chr3 exon 23802711 23803560 23802711 ID=MsaT012408.1.exon2;Parent=MsaT012408.1
Chr3 CDS 23802711 23803560 23802711 ID=cds.MsaT012408.1;Parent=MsaT012408.1
Chr3 exon 23804913 23806459 23804913 ID=MsaT012408.1.exon1;Parent=MsaT012408.1
Chr3 CDS 23804913 23806459 23804913 ID=cds.MsaT012408.1;Parent=MsaT012408.1
Gene Sequence

>MsaT012408.1

ATGAATGCATCTAGCAATACATGTGAGATAGTGGAATACAGGGAAGAGATATTTCCCGAGTTCGAAACAGATGAAAAGCCTCAGAGTAGTTGTTCCTACAAATCAGGAAAAAGGTACTCGATTGAGGCTGATATTGATCGTCTTTTCAAGGCTATTGAGATTAAAAGTACATCTAGAGGTCATAGTACTTCGCGTTCGCAACAAAGTTCTCTTAAAAGGCCGATTAAAGTTTGTCCGTCTCAGGCTTCGGGAATTGGCATCGCGGAGCCTGTTAGTTTGAAGCAGGCACTTAGAGGATTGTGCATCTCTCAGGCATCAGAAATGGCTGCTTTGAAGAGAGTATCAAAGCAATGCAGCTCATCAAGAGTATCAGAGGCTGGTACAGTAAAGAAGTTGGTTGAAATATCCCTAGTGCCAGAGATATCTACACTTTCTCGTAAATTTCCCGATGTAGTGATATCGAGTTCAACTGCTAATCATTCTATTCCTGTCGTCAATGCAACAAGCTTAACAGAAATGACAACTAGGTTTGTGTCCCAAGATCAGATTGTTCCTGTTCCACCTAGCAAGCAAACGCTACAAACCGAGGAATTGCTAGAGGTCAGAATGAATCCTACTACGTCGAGTAAATCTTGTCTCAGTTCTTCAATGCCGGATAAGGACCGGGAGAAAAATTTTCATTGTGCATCTTGTCCACCTAGTTCTAGCAATGATAGTGGAGTGGGCAAAAACTCAAGCCTTAGTACATGTTTGGCAAAACCAATATTCAATAACGTGAACTTCCTTAAGAAAAAGGTGAAGAAAGATCAATGTTCTGCCTCAAGCTGCGCTACTAGTAGTTTCAACAAGGAGAATGGAAATTCTGATCTTAAGCATGATATTAAAGAAAATGATGATAAACCATCTCCGTGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGTTAGTAGGGATTCAAGTAAACCTGGTTTTAGTTTGAATTTCAGTAAGAAAACTAAGTTTCTTGTTACAAAAGTTGACGAAAAATCAAAATCGAAGGAAAAGGGTGAGTTCTCTCAGAGCTCAAAAAGTAGCATGGGTGAGTATAGTACTAGTAGCACAAGTATCAGTGAAGAGAGCAATCTTAGTGGTTCGAATCGCAGTGGCCAACGACCGCACATGTCAAAACACTCGAGATGGGAAGCTATTCGTGCGATTCAACAGCAGCATGGTAACTTAAATTTGAGGCACTTTAGGCTGATAAGGAAGCTTGGTAGTGGAGACATTGGAACCGTTTATCTTGCAGAACTAATTGGTACTAGTTGCCTTTTTGCACTGAAAGTTATGGACAATGAATTTTTGGCTAGCAGGAAGAAAACATTTAGAGTTCAAACTGAAAGAGAGATCCTTCAAATGTTGGATCATCCATTTCTTCCTACACTATATTCCCATATTACTACGACTAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGTGATCTGCATGTGCTGCGACAGAAGCAAACATACAGGAGCTTTTCGGAGCAAGCAGCTAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTTGAGTATTTGCACATGATGGGAGTTGTATATCGAGATCTAAAGCCGGAAAATATCCTAGTACGCGAAGATGGACATATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAATCCAATGTTAGTCAAACCATCTTCACCCGATGCAGATGCCGCAAAGAAAACCTCCAATCCTTGCTCAGGGGCTAGTTGCATACACCCTTTCTGTCTCCAACCGGATTGGCAAGTTTCGTGCTTTGCTCCTATTCTATTGTCTCCCGGGGCAAAATCTCGAAAGATGAAGGCTGACATAGCTGCTCAAGTTGGTCCACTTCCACAGCTTGTAGTTGAGCCTACCAATGCACGGTCTAACTCCTTCGTTGGAACATATGAATATCTTGCTCCGGAGATCATCAAAAGTGAGGGACATGGAAACGCTGTAGATTGGTGGACTTTCGGTATATTTTTGTTTGAGCTTTTATATGGAAAGACTCCCTTCAAAGGTCCATCAAATGATGATACATTATCAAATGTTGTGTCGGAGAGCCTTAAGTTTCCAGGTACTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGGGGATTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCGATAAAAGGTGCTGCAGAAATAAAACAGCATCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCGGCACCACCGGAGCTCCCCAAGTTTCGCGATTTTGGAACTAGTGCTCCATCTATGGCTGCACAGAAGGAGAATGCAAATGATTTAGAGGATATAGATGATTGTGAAGAGTTTGAGCTTTTTTAG
Protein sequence

>MsaT012408.1

MNASSNTCEIVEYREEIFPEFETDEKPQSSCSYKSGKRYSIEADIDRLFKAIEIKSTSRGHSTSRSQQSSLKRPIKVCPSQASGIGIAEPVSLKQALRGLCISQASEMAALKRVSKQCSSSRVSEAGTVKKLVEISLVPEISTLSRKFPDVVISSSTANHSIPVVNATSLTEMTTRFVSQDQIVPVPPSKQTLQTEELLEVRMNPTTSSKSCLSSSMPDKDREKNFHCASCPPSSSNDSGVGKNSSLSTCLAKPIFNNVNFLKKKVKKDQCSASSCATSSFNKENGNSDLKHDIKENDDKPSPCSSNHSIEVNSINVSRDSSKPGFSLNFSKKTKFLVTKVDEKSKSKEKGEFSQSSKSSMGEYSTSSTSISEESNLSGSNRSGQRPHMSKHSRWEAIRAIQQQHGNLNLRHFRLIRKLGSGDIGTVYLAELIGTSCLFALKVMDNEFLASRKKTFRVQTEREILQMLDHPFLPTLYSHITTTKLSCLVMEYCPGGDLHVLRQKQTYRSFSEQAARFYVAEVLLALEYLHMMGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKPSSPDADAAKKTSNPCSGASCIHPFCLQPDWQVSCFAPILLSPGAKSRKMKADIAAQVGPLPQLVVEPTNARSNSFVGTYEYLAPEIIKSEGHGNAVDWWTFGIFLFELLYGKTPFKGPSNDDTLSNVVSESLKFPGTPIVSFHARDLIRGLLIKDPENRLGSIKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGTSAPSMAAQKENANDLEDIDDCEEFELF*