AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG012512

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012512 MtrunA17_Chr3g0080861 83.208 530 46 6 1 497 1 520 0.0 867
MsaG012512 MtrunA17_Chr8g0354661 49.906 533 221 9 1 493 2 528 5.24e-162 470
MsaG012512 MtrunA17_Chr3g0099131 78.261 115 25 0 37 151 41 155 7.26e-61 208
MsaG012512 MtrunA17_Chr2g0322521 73.171 123 33 0 31 153 23 145 5.31e-59 199
MsaG012512 MtrunA17_Chr1g0154031 57.764 161 59 2 37 189 76 235 1.08e-55 191
MsaG012512 MtrunA17_Chr1g0192411 62.281 114 43 0 35 148 10 123 4.53e-46 166
MsaG012512 MtrunA17_Chr5g0410961 61.321 106 41 0 35 140 10 115 1.63e-45 162
MsaG012512 MtrunA17_Chr2g0281071 58.974 117 41 1 24 140 7 116 1.79e-45 162
MsaG012512 MtrunA17_Chr1g0203411 54.167 144 54 2 24 163 7 142 2.00e-45 160
MsaG012512 MtrunA17_Chr4g0048511 58.120 117 42 1 24 140 7 116 8.03e-45 160
MsaG012512 MtrunA17_Chr5g0395281 62.500 104 39 0 37 140 12 115 2.73e-44 158
MsaG012512 MtrunA17_Chr4g0039971 61.538 104 40 0 37 140 13 116 3.09e-43 156
MsaG012512 MtrunA17_Chr2g0323411 60.000 110 43 1 37 145 12 121 4.62e-43 155
MsaG012512 MtrunA17_Chr1g0167691 57.265 117 42 1 24 140 7 115 6.13e-43 152
MsaG012512 MtrunA17_Chr1g0209661 57.547 106 45 0 37 142 27 132 1.23e-42 154
MsaG012512 MtrunA17_Chr1g0194301 55.556 126 54 1 19 142 13 138 1.34e-42 152
MsaG012512 MtrunA17_Chr3g0115821 59.615 104 42 0 37 140 12 115 4.56e-42 153
MsaG012512 MtrunA17_Chr8g0349261 61.905 105 39 1 37 140 13 117 5.62e-42 151
MsaG012512 MtrunA17_Chr7g0228231 58.252 103 43 0 37 139 14 116 7.91e-42 148
MsaG012512 MtrunA17_Chr3g0099141 75.904 83 20 0 37 119 40 122 1.01e-41 145
MsaG012512 MtrunA17_Chr1g0186061 57.983 119 49 1 25 142 7 125 1.14e-41 149
MsaG012512 MtrunA17_Chr8g0346561 63.366 101 37 0 35 135 10 110 1.21e-41 150
MsaG012512 MtrunA17_Chr1g0168661 55.462 119 49 1 28 142 8 126 1.22e-41 149
MsaG012512 MtrunA17_Chr7g0275911 61.386 101 39 0 35 135 10 110 1.78e-41 149
MsaG012512 MtrunA17_Chr1g0187761 60.577 104 41 0 37 140 12 115 2.59e-41 148
MsaG012512 MtrunA17_Chr4g0068061 58.491 106 44 0 35 140 10 115 3.55e-41 150
MsaG012512 MtrunA17_Chr7g0217221 59.434 106 43 0 37 142 12 117 4.00e-41 148
MsaG012512 MtrunA17_Chr7g0217741 59.434 106 43 0 35 140 10 115 4.77e-41 149
MsaG012512 MtrunA17_Chr5g0435101 57.692 104 44 0 37 140 11 114 4.94e-41 146
MsaG012512 MtrunA17_Chr1g0194291 59.434 106 43 0 37 142 21 126 7.64e-41 147
MsaG012512 MtrunA17_Chr6g0450101 57.282 103 44 0 37 139 14 116 7.87e-41 145
MsaG012512 MtrunA17_Chr1g0193371 59.434 106 43 0 37 142 12 117 9.75e-41 150
MsaG012512 MtrunA17_Chr1g0167661 55.556 117 44 1 24 140 7 115 1.34e-40 146
MsaG012512 MtrunA17_Chr4g0022931 58.654 104 43 0 37 140 13 116 1.44e-40 147
MsaG012512 MtrunA17_Chr7g0261281 59.615 104 42 0 37 140 12 115 1.46e-40 147
MsaG012512 MtrunA17_Chr4g0037141 60.784 102 40 0 39 140 14 115 1.57e-40 147
MsaG012512 MtrunA17_Chr4g0070641 61.616 99 38 0 37 135 12 110 1.93e-40 143
MsaG012512 MtrunA17_Chr3g0131121 61.765 102 39 0 39 140 14 115 2.16e-40 147
MsaG012512 MtrunA17_Chr4g0070611 58.654 104 43 0 37 140 12 115 3.29e-40 147
MsaG012512 MtrunA17_Chr4g0060721 59.615 104 42 0 37 140 13 116 3.50e-40 147
MsaG012512 MtrunA17_Chr4g0042671 59.434 106 43 0 35 140 10 115 3.76e-40 149
MsaG012512 MtrunA17_Chr6g0453211 62.626 99 37 0 37 135 12 110 3.98e-40 147
MsaG012512 MtrunA17_Chr6g0453471 59.434 106 43 0 35 140 10 115 4.30e-40 148
MsaG012512 MtrunA17_Chr2g0309911 56.731 104 45 0 37 140 11 114 5.44e-40 146
MsaG012512 MtrunA17_Chr4g0022911 56.731 104 45 0 37 140 13 116 5.54e-40 146
MsaG012512 MtrunA17_Chr3g0121241 57.547 106 45 0 35 140 40 145 5.83e-40 146
MsaG012512 MtrunA17_Chr4g0022901 57.692 104 44 0 37 140 13 116 7.10e-40 145
MsaG012512 MtrunA17_Chr7g0274581 53.846 104 48 0 37 140 12 115 8.89e-40 142
MsaG012512 MtrunA17_Chr8g0387421 58.491 106 44 0 37 142 12 117 1.51e-39 145
MsaG012512 MtrunA17_Chr7g0254411 58.491 106 44 0 35 140 10 115 1.63e-39 146
MsaG012512 MtrunA17_Chr7g0270891 57.547 106 45 0 37 142 12 117 1.90e-39 146
MsaG012512 MtrunA17_Chr3g0110351 55.556 108 48 0 35 142 10 117 2.08e-39 145
MsaG012512 MtrunA17_Chr2g0328771 55.660 106 47 0 37 142 20 125 2.18e-39 145
MsaG012512 MtrunA17_Chr1g0151941 54.545 110 49 1 37 145 12 121 2.65e-39 143
MsaG012512 MtrunA17_Chr8g0385321 57.843 102 43 0 39 140 14 115 2.75e-39 145
MsaG012512 MtrunA17_Chr1g0193801 57.547 106 45 0 37 142 12 117 3.67e-39 146
MsaG012512 MtrunA17_Chr5g0434571 55.556 108 48 0 35 142 46 153 4.27e-39 145
MsaG012512 MtrunA17_Chr7g0228891 58.491 106 44 0 35 140 10 115 4.60e-39 143
MsaG012512 MtrunA17_Chr2g0311221 58.586 99 41 0 37 135 14 112 8.86e-39 144
MsaG012512 MtrunA17_Chr3g0092401 54.630 108 49 0 35 142 11 118 1.61e-38 142
MsaG012512 MtrunA17_Chr1g0211161 47.826 138 65 2 37 167 13 150 1.90e-38 140
MsaG012512 MtrunA17_Chr4g0057031 56.731 104 45 0 37 140 12 115 2.25e-38 141
MsaG012512 MtrunA17_Chr2g0323351 53.448 116 46 1 24 139 7 114 2.70e-38 140
MsaG012512 MtrunA17_Chr2g0330041 55.769 104 46 0 37 140 12 115 2.73e-38 144
MsaG012512 MtrunA17_Chr3g0117091 57.692 104 44 0 37 140 12 115 3.61e-38 142
MsaG012512 MtrunA17_Chr8g0342541 55.769 104 46 0 37 140 12 115 4.99e-38 142
MsaG012512 MtrunA17_Chr5g0440781 41.615 161 85 4 38 189 13 173 6.62e-38 137
MsaG012512 MtrunA17_Chr5g0440761 41.615 161 85 4 38 189 13 173 1.10e-37 139
MsaG012512 MtrunA17_Chr8g0342521 56.731 104 45 0 37 140 12 115 1.16e-37 141
MsaG012512 MtrunA17_Chr4g0032401 56.731 104 45 0 37 140 17 120 1.27e-37 140
MsaG012512 MtrunA17_Chr4g0058631 56.731 104 45 0 37 140 12 115 1.30e-37 141
MsaG012512 MtrunA17_Chr6g0452271 57.692 104 44 0 37 140 12 115 1.87e-37 140
MsaG012512 MtrunA17_Chr3g0088461 56.731 104 45 0 37 140 22 125 1.97e-37 140
MsaG012512 MtrunA17_Chr5g0441141 41.615 161 85 4 38 189 13 173 2.02e-37 138
MsaG012512 MtrunA17_Chr4g0044421 55.882 102 45 0 39 140 14 115 2.21e-37 135
MsaG012512 MtrunA17_Chr5g0397231 58.586 99 41 0 37 135 12 110 2.26e-37 140
MsaG012512 MtrunA17_Chr4g0022891 55.882 102 45 0 37 138 12 113 2.89e-37 137
MsaG012512 MtrunA17_Chr7g0271241 60.204 98 39 0 37 134 12 109 2.94e-37 140
MsaG012512 MtrunA17_Chr1g0194951 56.604 106 46 0 35 140 10 115 3.61e-37 140
MsaG012512 MtrunA17_Chr4g0028311 54.630 108 48 1 37 143 12 119 4.04e-37 139
MsaG012512 MtrunA17_Chr1g0152011 57.143 105 44 1 37 140 12 116 5.03e-37 139
MsaG012512 MtrunA17_Chr5g0400821 56.190 105 45 1 37 140 12 116 1.06e-36 137
MsaG012512 MtrunA17_Chr3g0103281 55.769 104 46 0 37 140 12 115 1.67e-36 137
MsaG012512 MtrunA17_Chr7g0264641 48.387 124 60 2 37 156 12 135 2.08e-36 135
MsaG012512 MtrunA17_Chr2g0327351 57.000 100 42 1 37 135 12 111 3.58e-36 136
MsaG012512 MtrunA17_Chr5g0441131 49.138 116 58 1 35 149 7 122 7.84e-36 131
MsaG012512 MtrunA17_Chr5g0417821 54.808 104 47 0 37 140 7 110 8.05e-36 134
MsaG012512 MtrunA17_Chr8g0343831 58.763 97 40 0 39 135 10 106 1.09e-35 133
MsaG012512 MtrunA17_Chr1g0180391 54.808 104 47 0 37 140 19 122 1.21e-35 132
MsaG012512 MtrunA17_Chr4g0054391 58.586 99 40 1 37 134 12 110 1.95e-35 134
MsaG012512 MtrunA17_Chr3g0135311 54.286 105 47 1 37 140 12 116 2.20e-35 135
MsaG012512 MtrunA17_Chr8g0334881 49.533 107 53 1 37 142 10 116 3.65e-35 134
MsaG012512 MtrunA17_Chr6g0487491 49.573 117 50 2 37 144 12 128 3.77e-35 132
MsaG012512 MtrunA17_Chr4g0022881 51.961 102 49 0 38 139 13 114 4.30e-35 131
MsaG012512 MtrunA17_Chr2g0293911 56.311 103 45 0 37 139 24 126 4.85e-35 133
MsaG012512 MtrunA17_Chr7g0269831 57.547 106 45 0 35 140 10 115 5.47e-35 134
MsaG012512 MtrunA17_Chr4g0055981 55.556 99 44 0 37 135 55 153 6.17e-35 130
MsaG012512 MtrunA17_Chr2g0327821 54.808 104 47 0 37 140 6 109 8.40e-35 130
MsaG012512 MtrunA17_Chr4g0068921 55.340 103 46 0 37 139 24 126 8.57e-35 129
MsaG012512 MtrunA17_Chr1g0203441 55.340 103 46 0 38 140 14 116 9.28e-35 131
MsaG012512 MtrunA17_Chr8g0342481 53.333 105 48 1 37 140 12 116 1.02e-34 134
MsaG012512 MtrunA17_Chr4g0072751 58.000 100 41 1 37 135 12 111 1.13e-34 133
MsaG012512 MtrunA17_Chr4g0013361 49.533 107 53 1 37 142 10 116 2.18e-34 130
MsaG012512 MtrunA17_Chr6g0470971 32.906 234 116 4 38 243 15 235 2.28e-34 130
MsaG012512 MtrunA17_Chr7g0220341 45.238 126 67 1 17 140 5 130 9.23e-34 128
MsaG012512 MtrunA17_Chr5g0434831 51.923 104 50 0 37 140 7 110 2.85e-33 124
MsaG012512 MtrunA17_Chr4g0030881 51.786 112 47 1 36 140 6 117 3.52e-33 126
MsaG012512 MtrunA17_Chr8g0360111 55.340 103 44 1 33 135 23 123 3.81e-33 126
MsaG012512 MtrunA17_Chr5g0434931 47.414 116 59 1 27 140 23 138 7.08e-33 126
MsaG012512 MtrunA17_Chr5g0434911 41.860 129 67 1 12 140 4 124 7.16e-32 123
MsaG012512 MtrunA17_Chr7g0240821 47.748 111 53 1 33 143 2 107 4.58e-31 120
MsaG012512 MtrunA17_Chr5g0434841 50.000 104 52 0 37 140 20 123 7.72e-31 121
MsaG012512 MtrunA17_Chr7g0247131 65.333 75 26 0 69 143 10 84 1.33e-30 119
MsaG012512 MtrunA17_Chr7g0228991 49.038 104 53 0 37 140 29 132 3.39e-30 119
MsaG012512 MtrunA17_Chr5g0395221 56.098 82 36 0 32 113 7 88 6.30e-28 106
MsaG012512 MtrunA17_Chr4g0042611 55.696 79 35 0 35 113 10 88 6.63e-28 106
MsaG012512 MtrunA17_Chr5g0429661 48.598 107 51 3 36 141 119 222 1.36e-27 113
MsaG012512 MtrunA17_Chr2g0294811 54.430 79 36 0 35 113 10 88 5.09e-27 105
MsaG012512 MtrunA17_Chr3g0133601 47.170 106 55 1 39 144 37 141 5.26e-27 108
MsaG012512 MtrunA17_Chr4g0008551 48.148 108 53 2 39 145 38 143 7.47e-27 111
MsaG012512 MtrunA17_Chr5g0401731 49.020 102 51 1 39 140 15 115 2.77e-26 109
MsaG012512 MtrunA17_Chr2g0323321 47.872 94 41 1 21 114 3 88 5.87e-26 102
MsaG012512 MtrunA17_Chr3g0117511 41.322 121 68 2 31 149 175 294 6.64e-26 110
MsaG012512 MtrunA17_Chr6g0453751 51.485 101 38 3 27 118 12 110 1.91e-25 101
MsaG012512 MtrunA17_Chr6g0454921 47.059 102 53 1 39 140 15 115 2.52e-25 103
MsaG012512 MtrunA17_Chr4g0058991 47.222 108 53 3 35 141 205 309 3.31e-25 108
MsaG012512 MtrunA17_Chr3g0139671 46.154 104 55 1 37 140 83 185 5.44e-25 109
MsaG012512 MtrunA17_Chr4g0053431 44.118 102 56 1 39 140 5 105 1.74e-24 102
MsaG012512 MtrunA17_Chr7g0228531 42.520 127 66 4 17 143 202 321 2.74e-24 105
MsaG012512 MtrunA17_Chr7g0238631 48.077 104 53 1 37 140 111 213 4.29e-24 105
MsaG012512 MtrunA17_Chr5g0437321 45.133 113 59 2 23 135 5 114 5.70e-24 101
MsaG012512 MtrunA17_Chr5g0425591 48.889 90 45 1 30 118 2 91 6.13e-24 95.9
MsaG012512 MtrunA17_Chr1g0157731 43.269 104 58 1 37 140 89 191 7.14e-24 105
MsaG012512 MtrunA17_Chr8g0342531 52.564 78 37 0 37 114 12 89 7.21e-24 98.2
MsaG012512 MtrunA17_Chr6g0460661 42.056 107 61 1 39 145 16 121 7.96e-24 97.8
MsaG012512 MtrunA17_Chr8g0342511 53.947 76 35 0 37 112 12 87 2.19e-23 94.4
MsaG012512 MtrunA17_Chr6g0480581 42.727 110 62 1 39 148 4 112 5.50e-23 97.8
MsaG012512 MtrunA17_Chr7g0254261 43.636 110 61 1 39 148 89 197 1.42e-22 99.0
MsaG012512 MtrunA17_Chr5g0434901 61.538 65 25 0 71 135 7 71 4.81e-22 91.3
MsaG012512 MtrunA17_Chr8g0342461 50.649 77 37 1 39 114 14 90 5.86e-22 92.0
MsaG012512 MtrunA17_Chr7g0229131 31.844 179 100 3 69 238 4 169 6.29e-22 92.8
MsaG012512 MtrunA17_Chr5g0417621 42.276 123 66 3 23 142 116 236 6.92e-22 98.2
MsaG012512 MtrunA17_Chr4g0042501 41.525 118 64 3 28 142 92 207 8.26e-22 97.8
MsaG012512 MtrunA17_Chr8g0342471 50.649 77 37 1 39 114 14 90 1.18e-21 90.9
MsaG012512 MtrunA17_Chr7g0229101 54.286 70 32 0 69 138 4 73 1.81e-21 92.4
MsaG012512 MtrunA17_Chr5g0397841 45.918 98 52 1 37 134 108 204 3.53e-21 96.3
MsaG012512 MtrunA17_Chr7g0228401 50.000 90 43 2 50 139 290 377 2.39e-20 94.0
MsaG012512 MtrunA17_Chr7g0238651 38.835 103 61 1 42 142 10 112 2.70e-20 92.4
MsaG012512 MtrunA17_Chr7g0228481 38.583 127 71 4 17 143 202 321 1.03e-19 91.7
MsaG012512 MtrunA17_Chr3g0125801 43.810 105 56 2 39 142 16 118 1.32e-19 89.4
MsaG012512 MtrunA17_Chr3g0093811 50.000 72 36 0 69 140 14 85 2.83e-19 87.8
MsaG012512 MtrunA17_Chr6g0460671 40.367 109 60 2 39 145 99 204 5.21e-19 88.6
MsaG012512 MtrunA17_Chr1g0177901 34.839 155 79 5 49 187 4 152 2.52e-18 83.6
MsaG012512 MtrunA17_Chr1g0193901 50.575 87 41 2 37 121 11 97 1.60e-17 78.6
MsaG012512 MtrunA17_Chr1g0193891 50.575 87 41 2 37 121 11 97 1.60e-17 78.6
MsaG012512 MtrunA17_Chr1g0193871 50.575 87 41 2 37 121 11 97 1.60e-17 78.6
MsaG012512 MtrunA17_Chr1g0193881 50.575 87 41 2 37 121 11 97 1.60e-17 78.6
MsaG012512 MtrunA17_Chr7g0233061 31.618 136 83 4 7 139 148 276 5.24e-17 82.4
MsaG012512 MtrunA17_Chr8g0362231 38.384 99 60 1 42 140 25 122 6.96e-16 79.7
MsaG012512 MtrunA17_Chr5g0416341 36.634 101 63 1 42 142 29 128 1.41e-15 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG012512 AT3G11440.3 37.398 492 233 13 36 472 40 511 3.22e-83 268
MsaG012512 AT3G11440.4 37.398 492 233 13 36 472 40 511 3.22e-83 268
MsaG012512 AT3G11440.1 37.398 492 233 13 36 472 40 511 3.22e-83 268
MsaG012512 AT5G06100.5 37.959 490 212 16 34 472 29 477 3.76e-78 254
MsaG012512 AT5G06100.2 37.959 490 212 16 34 472 29 477 3.76e-78 254
MsaG012512 AT5G06100.3 37.959 490 212 16 34 472 29 477 3.76e-78 254
MsaG012512 AT5G06100.4 37.959 490 212 16 34 472 29 477 3.76e-78 254
MsaG012512 AT3G11440.2 40.897 379 166 9 36 361 40 413 2.54e-76 248
MsaG012512 AT5G06100.1 41.103 399 173 12 34 381 29 416 2.35e-75 244
MsaG012512 AT5G55020.1 79.339 121 25 0 32 152 21 141 1.89e-66 223
MsaG012512 AT2G32460.2 73.485 132 35 0 34 165 3 134 2.54e-65 219
MsaG012512 AT2G32460.1 73.485 132 35 0 34 165 15 146 3.17e-65 219
MsaG012512 AT4G26930.1 75.194 129 29 1 26 151 5 133 1.08e-64 214
MsaG012512 AT2G26960.1 55.556 162 59 2 37 185 20 181 4.42e-56 193
MsaG012512 AT4G21440.1 59.829 117 39 1 24 140 7 115 1.23e-45 163
MsaG012512 AT4G28110.1 56.911 123 44 2 24 145 7 121 5.71e-45 159
MsaG012512 AT3G02940.2 62.500 104 39 0 37 140 12 115 1.81e-44 159
MsaG012512 AT3G61250.1 63.208 106 39 0 35 140 10 115 3.22e-44 158
MsaG012512 AT3G02940.1 62.500 104 39 0 37 140 12 115 3.49e-44 158
MsaG012512 AT3G02940.3 62.500 104 39 0 37 140 12 115 3.49e-44 158
MsaG012512 AT4G05100.1 58.974 117 41 1 24 140 7 116 5.12e-44 158
MsaG012512 AT1G22640.1 62.500 104 39 0 37 140 12 115 1.68e-43 154
MsaG012512 AT5G16770.4 56.410 117 43 1 24 140 7 115 4.62e-43 155
MsaG012512 AT5G16770.3 56.410 117 43 1 24 140 7 115 4.62e-43 155
MsaG012512 AT5G16770.1 56.410 117 43 1 24 140 7 115 7.16e-43 155
MsaG012512 AT5G16770.2 56.410 117 43 1 24 140 7 115 7.16e-43 155
MsaG012512 AT4G09460.1 63.725 102 37 0 39 140 14 115 1.23e-42 152
MsaG012512 AT3G01530.1 60.194 103 41 0 37 139 25 127 1.71e-42 150
MsaG012512 AT1G35515.1 61.538 104 40 0 37 140 12 115 5.86e-42 149
MsaG012512 AT5G10280.1 61.538 104 40 0 37 140 12 115 5.91e-42 153
MsaG012512 AT1G34670.1 56.410 117 43 1 24 140 7 115 6.87e-42 153
MsaG012512 AT3G13540.1 58.654 104 43 0 37 140 23 126 1.24e-41 149
MsaG012512 AT5G65230.1 58.654 104 43 0 37 140 12 115 1.89e-41 150
MsaG012512 AT2G16720.1 61.538 104 40 0 37 140 12 115 2.14e-41 149
MsaG012512 AT5G14750.1 59.223 103 42 0 38 140 17 119 2.45e-41 147
MsaG012512 AT3G23250.1 54.400 125 53 1 37 161 12 132 2.74e-41 149
MsaG012512 AT5G54230.1 59.615 104 42 0 37 140 12 115 3.00e-41 150
MsaG012512 AT2G31180.1 59.615 104 42 0 37 140 12 115 5.60e-41 147
MsaG012512 AT3G01140.2 60.577 104 41 0 37 140 12 115 5.97e-41 150
MsaG012512 AT3G47600.1 58.491 106 44 0 35 140 10 115 7.49e-41 150
MsaG012512 AT5G40330.1 57.944 107 45 0 38 144 13 119 7.52e-41 146
MsaG012512 AT3G01140.1 60.577 104 41 0 37 140 55 158 9.62e-41 151
MsaG012512 AT4G13480.1 59.813 107 43 0 36 142 5 111 1.19e-40 147
MsaG012512 AT1G66230.1 58.333 108 45 0 35 142 10 117 1.32e-40 147
MsaG012512 AT1G06180.1 45.783 166 78 1 35 200 10 163 2.26e-40 146
MsaG012512 AT3G27810.1 55.340 103 46 0 37 139 20 122 2.32e-40 145
MsaG012512 AT5G15310.4 59.615 104 42 0 37 140 12 115 2.63e-40 145
MsaG012512 AT5G62470.2 58.491 106 44 0 35 140 10 115 2.77e-40 149
MsaG012512 AT4G38620.1 60.784 102 40 0 39 140 14 115 2.91e-40 147
MsaG012512 AT5G15310.1 59.615 104 42 0 37 140 12 115 2.92e-40 148
MsaG012512 AT5G15310.2 59.615 104 42 0 37 140 12 115 3.43e-40 147
MsaG012512 AT5G07690.1 56.604 106 46 0 34 139 9 114 3.68e-40 148
MsaG012512 AT3G13890.2 57.692 104 44 0 37 140 12 115 3.87e-40 148
MsaG012512 AT5G61420.2 56.075 107 47 0 34 140 9 115 4.24e-40 149
MsaG012512 AT5G40350.1 55.340 103 46 0 37 139 17 119 4.42e-40 144
MsaG012512 AT5G49330.1 58.491 106 44 0 35 140 10 115 4.91e-40 148
MsaG012512 AT1G57560.2 57.692 104 44 0 37 140 12 115 5.10e-40 146
MsaG012512 AT4G01680.3 58.491 106 44 0 37 142 12 117 5.82e-40 145
MsaG012512 AT1G25340.1 38.356 219 118 6 20 229 5 215 6.07e-40 146
MsaG012512 AT5G26660.1 57.547 106 45 0 37 142 12 117 6.72e-40 147
MsaG012512 AT1G57560.1 57.692 104 44 0 37 140 12 115 6.73e-40 147
MsaG012512 AT1G74650.1 57.547 106 45 0 35 140 10 115 6.83e-40 147
MsaG012512 AT3G28910.1 60.185 108 41 1 33 140 10 115 6.91e-40 147
MsaG012512 AT5G07700.1 51.667 120 50 1 21 140 4 115 7.25e-40 147
MsaG012512 AT5G07700.2 51.667 120 50 1 21 140 4 115 7.25e-40 147
MsaG012512 AT4G34990.1 59.804 102 41 0 39 140 14 115 7.43e-40 145
MsaG012512 AT3G24310.1 58.491 106 44 0 38 143 19 124 8.02e-40 145
MsaG012512 AT2G47190.1 55.660 106 47 0 37 142 20 125 1.10e-39 145
MsaG012512 AT1G18570.1 60.577 104 41 0 37 140 13 116 1.60e-39 147
MsaG012512 AT4G01680.1 58.491 106 44 0 37 142 12 117 1.85e-39 146
MsaG012512 AT1G48000.1 54.286 105 48 0 35 139 30 134 3.54e-39 142
MsaG012512 AT4G37780.1 56.075 107 46 1 35 140 10 116 4.03e-39 144
MsaG012512 AT5G35550.1 50.413 121 60 0 37 157 14 134 4.71e-39 143
MsaG012512 AT1G08810.1 56.604 106 46 0 35 140 10 115 5.49e-39 143
MsaG012512 AT3G27920.1 58.252 103 43 0 38 140 15 117 5.59e-39 142
MsaG012512 AT1G68320.1 55.660 106 47 0 37 142 19 124 5.93e-39 143
MsaG012512 AT2G47460.1 57.547 106 45 0 35 140 10 115 6.02e-39 145
MsaG012512 AT5G12870.1 56.604 106 46 0 37 142 18 123 6.87e-39 143
MsaG012512 AT5G62470.1 58.491 106 43 1 35 140 10 114 9.17e-39 144
MsaG012512 AT5G16600.1 48.026 152 68 4 35 175 10 161 3.81e-38 142
MsaG012512 AT5G60890.1 55.660 106 47 0 37 142 12 117 3.96e-38 141
MsaG012512 AT1G79180.1 55.769 104 46 0 37 140 14 117 4.93e-38 141
MsaG012512 AT4G17785.2 54.808 104 47 0 37 140 13 116 5.46e-38 142
MsaG012512 AT4G17785.1 54.808 104 47 0 37 140 13 116 6.03e-38 142
MsaG012512 AT5G62320.1 55.752 113 43 1 35 140 11 123 6.90e-38 139
MsaG012512 AT5G56110.1 53.982 113 51 1 37 149 12 123 7.18e-38 141
MsaG012512 AT3G30210.1 57.547 106 45 0 38 143 28 133 8.29e-38 140
MsaG012512 AT4G12350.1 54.717 106 48 0 35 140 10 115 1.37e-37 139
MsaG012512 AT1G09540.1 54.717 106 48 0 37 142 12 117 1.63e-37 141
MsaG012512 AT3G08500.1 50.394 127 59 1 16 142 13 135 1.92e-37 140
MsaG012512 AT1G63910.1 55.660 106 47 0 37 142 12 117 2.03e-37 141
MsaG012512 AT3G62610.1 55.660 106 47 0 35 140 10 115 2.24e-37 140
MsaG012512 AT2G26950.1 52.542 118 56 0 36 153 15 132 2.42e-37 141
MsaG012512 AT1G16490.1 53.846 104 48 0 37 140 14 117 2.83e-37 138
MsaG012512 AT3G13890.1 53.097 113 44 1 37 140 12 124 3.08e-37 140
MsaG012512 AT4G22680.1 54.808 104 47 0 37 140 12 115 3.18e-37 138
MsaG012512 AT5G52600.1 54.630 108 49 0 33 140 8 115 3.45e-37 136
MsaG012512 AT3G60460.1 53.271 107 49 1 37 142 11 117 3.71e-37 139
MsaG012512 AT1G56160.1 53.846 104 48 0 37 140 14 117 4.31e-37 139
MsaG012512 AT5G14340.1 54.630 108 49 0 35 142 22 129 4.83e-37 138
MsaG012512 AT1G74080.1 57.282 103 44 0 37 139 12 114 7.30e-37 139
MsaG012512 AT3G12720.1 50.442 113 56 0 28 140 13 125 9.18e-37 138
MsaG012512 AT2G36890.1 53.913 115 50 2 37 150 12 124 1.32e-36 137
MsaG012512 AT5G65790.1 57.143 105 44 1 37 140 12 116 1.94e-36 139
MsaG012512 AT2G36890.2 53.913 115 50 2 37 150 53 165 2.13e-36 138
MsaG012512 AT5G57620.1 56.190 105 45 1 37 140 12 116 2.20e-36 137
MsaG012512 AT5G23000.1 54.286 105 47 1 37 140 12 116 2.96e-36 137
MsaG012512 AT4G01680.2 52.542 118 44 1 37 142 12 129 3.41e-36 137
MsaG012512 AT3G49690.1 57.143 105 44 1 37 140 12 116 4.28e-36 136
MsaG012512 AT5G59780.3 55.340 103 46 0 38 140 9 111 6.64e-36 134
MsaG012512 AT1G74430.1 54.808 104 47 0 37 140 12 115 7.90e-36 134
MsaG012512 AT1G25340.2 36.986 219 116 7 20 229 5 210 1.78e-35 134
MsaG012512 AT3G28470.1 57.576 99 42 0 37 135 12 110 1.98e-35 134
MsaG012512 AT1G25340.3 36.986 219 116 7 20 229 5 210 2.17e-35 134
MsaG012512 AT3G46130.1 54.369 103 47 0 38 140 10 112 2.30e-35 133
MsaG012512 AT3G12820.1 53.846 104 48 0 37 140 14 117 6.81e-35 131
MsaG012512 AT3G06490.1 56.311 103 45 0 37 139 19 121 2.67e-34 132
MsaG012512 AT1G66370.1 50.476 105 52 0 37 141 8 112 8.86e-34 128
MsaG012512 AT1G18710.1 52.885 104 49 0 37 140 12 115 1.64e-33 128
MsaG012512 AT5G49620.1 53.398 103 48 0 37 139 26 128 4.86e-33 128
MsaG012512 AT1G79180.2 42.336 137 46 1 37 140 14 150 2.05e-32 126
MsaG012512 AT3G53200.1 50.000 108 54 0 36 143 8 115 4.82e-32 123
MsaG012512 AT3G48920.1 51.961 102 49 0 38 139 19 120 1.10e-31 123
MsaG012512 AT1G66380.1 51.429 105 51 0 37 141 8 112 1.54e-31 119
MsaG012512 AT5G52260.1 48.696 115 59 0 38 152 13 127 5.58e-31 121
MsaG012512 AT1G56650.1 50.476 105 52 0 37 141 8 112 1.60e-30 119
MsaG012512 AT5G49620.2 47.009 117 48 1 37 139 26 142 1.61e-29 118
MsaG012512 AT1G66390.1 50.476 105 52 0 37 141 8 112 2.25e-29 116
MsaG012512 AT5G26660.2 64.384 73 26 0 70 142 14 86 3.61e-29 117
MsaG012512 AT4G25560.1 48.544 103 53 0 38 140 11 113 4.97e-29 116
MsaG012512 AT5G35550.2 52.273 88 42 0 70 157 50 137 8.71e-27 109
MsaG012512 AT3G27785.1 48.544 103 52 1 39 141 189 290 1.21e-26 112
MsaG012512 AT3G27810.2 58.571 70 29 0 70 139 4 73 2.25e-26 105
MsaG012512 AT5G58850.1 49.057 106 50 3 37 141 103 205 3.99e-26 110
MsaG012512 AT4G18770.1 48.113 106 51 3 37 141 215 317 6.33e-26 110
MsaG012512 AT5G40360.1 42.453 106 60 1 36 141 155 259 7.37e-26 108
MsaG012512 AT5G11050.1 49.515 103 50 2 39 141 105 205 7.82e-26 110
MsaG012512 AT3G55730.1 48.077 104 51 2 39 141 56 157 1.16e-25 108
MsaG012512 AT5G40350.2 57.143 70 30 0 70 139 5 74 1.88e-25 103
MsaG012512 AT3G09230.1 50.000 102 50 1 39 140 55 155 1.98e-25 108
MsaG012512 AT3G12820.2 63.235 68 25 0 73 140 2 69 2.31e-25 103
MsaG012512 AT5G14750.3 60.294 68 27 0 73 140 18 85 2.53e-25 102
MsaG012512 AT2G23290.1 50.000 102 50 1 39 140 13 113 2.73e-25 106
MsaG012512 AT5G02320.1 44.628 121 63 2 37 154 125 244 4.41e-25 108
MsaG012512 AT5G02320.2 44.628 121 63 2 37 154 125 244 4.41e-25 108
MsaG012512 AT5G02320.3 44.628 121 63 2 37 154 65 184 5.71e-25 108
MsaG012512 AT2G39880.1 40.690 145 70 4 33 163 44 186 6.52e-25 106
MsaG012512 AT5G67300.1 48.039 102 52 1 39 140 6 106 1.01e-24 104
MsaG012512 AT3G47600.2 58.904 73 30 0 70 142 39 111 1.16e-24 105
MsaG012512 AT3G46130.3 59.722 72 29 0 69 140 9 80 1.24e-24 102
MsaG012512 AT5G59780.2 59.155 71 29 0 70 140 20 90 2.74e-24 101
MsaG012512 AT3G09370.2 37.013 154 88 3 37 187 133 280 3.69e-24 105
MsaG012512 AT3G46130.4 59.155 71 29 0 70 140 20 90 4.02e-24 101
MsaG012512 AT3G09370.1 37.013 154 88 3 37 187 128 275 4.08e-24 105
MsaG012512 AT4G37260.1 47.059 102 53 1 39 140 13 113 4.27e-24 103
MsaG012512 AT3G09370.3 37.013 154 88 3 37 187 141 288 4.28e-24 105
MsaG012512 AT3G53200.2 56.757 74 32 0 70 143 9 82 4.82e-24 100
MsaG012512 AT3G50060.1 44.860 107 58 1 39 145 6 111 5.79e-24 102
MsaG012512 AT4G32730.5 43.269 104 58 1 37 140 85 187 1.40e-23 105
MsaG012512 AT4G32730.4 43.269 104 58 1 37 140 85 187 1.40e-23 105
MsaG012512 AT4G32730.3 43.269 104 58 1 37 140 85 187 1.40e-23 105
MsaG012512 AT4G32730.2 43.269 104 58 1 37 140 85 187 1.40e-23 105
MsaG012512 AT4G32730.1 43.269 104 58 1 37 140 85 187 1.49e-23 105
MsaG012512 AT1G17950.1 44.828 116 61 2 35 149 1 114 2.56e-23 99.4
MsaG012512 AT5G11510.3 43.269 104 58 1 37 140 79 181 3.44e-23 103
MsaG012512 AT5G11510.1 43.269 104 58 1 37 140 79 181 3.44e-23 103
MsaG012512 AT5G11510.4 43.269 104 58 1 37 140 79 181 3.44e-23 103
MsaG012512 AT5G11510.5 43.269 104 58 1 37 140 79 181 4.11e-23 103
MsaG012512 AT5G11510.2 43.269 104 58 1 37 140 79 181 4.41e-23 103
MsaG012512 AT1G26780.1 45.370 108 56 2 36 142 95 200 6.72e-23 99.0
MsaG012512 AT1G26780.2 45.370 108 56 2 36 142 95 200 7.32e-23 100
MsaG012512 AT5G17800.1 44.860 107 58 1 36 142 90 195 9.38e-23 99.4
MsaG012512 AT4G33450.1 43.519 108 60 1 38 145 18 124 1.56e-22 97.1
MsaG012512 AT1G69560.2 39.007 141 75 4 9 142 89 225 1.94e-22 99.0
MsaG012512 AT1G69560.1 39.007 141 75 4 9 142 73 209 2.39e-22 98.2
MsaG012512 AT1G18960.1 44.118 102 54 2 39 140 10 108 1.48e-21 95.5
MsaG012512 AT1G66380.3 55.556 72 32 0 70 141 8 79 2.68e-21 89.4
MsaG012512 AT2G25230.1 42.308 104 58 2 37 140 24 125 4.21e-21 92.8
MsaG012512 AT1G73410.1 44.954 109 57 2 35 142 2 108 1.06e-20 91.7
MsaG012512 AT1G73410.2 44.954 109 57 2 35 142 2 108 1.63e-20 90.1
MsaG012512 AT3G29020.1 41.121 107 62 1 36 142 62 167 2.42e-20 90.5
MsaG012512 AT3G29020.2 41.121 107 62 1 36 142 64 169 3.85e-20 91.3
MsaG012512 AT4G00540.2 35.484 155 87 5 37 183 101 250 5.26e-20 92.4
MsaG012512 AT4G00540.1 35.484 155 87 5 37 183 99 248 1.06e-19 92.0
MsaG012512 AT1G66380.2 50.000 78 39 0 37 114 8 85 1.55e-19 84.3
MsaG012512 AT1G22640.3 63.158 57 21 0 84 140 2 58 2.35e-19 86.7
MsaG012512 AT2G37630.1 38.835 103 61 1 42 142 7 109 2.98e-19 89.7
MsaG012512 AT5G40430.1 34.307 137 84 4 4 140 22 152 7.98e-19 86.7
MsaG012512 AT3G23250.2 50.000 78 35 1 84 161 2 75 4.79e-18 83.6
MsaG012512 AT1G71030.2 50.769 65 32 0 76 140 5 69 4.28e-17 79.7
MsaG012512 AT1G71030.1 50.769 65 32 0 76 140 19 83 6.04e-17 79.7
MsaG012512 AT5G14750.4 54.386 57 26 0 84 140 2 58 7.79e-17 77.8
MsaG012512 AT5G14750.2 54.386 57 26 0 84 140 2 58 7.79e-17 77.8
MsaG012512 AT1G14350.2 33.663 101 66 1 42 142 28 127 1.04e-14 76.6
MsaG012512 AT1G14350.1 33.663 101 66 1 42 142 28 127 1.04e-14 76.6
MsaG012512 AT5G39700.1 36.000 100 63 1 40 139 57 155 1.16e-13 70.1
MsaG012512 AT2G02820.2 32.673 101 67 1 42 142 33 132 1.13e-12 70.5
MsaG012512 AT2G02820.1 32.673 101 67 1 42 142 33 132 1.61e-12 70.1
MsaG012512 AT2G02820.3 32.673 101 67 1 42 142 33 132 2.60e-12 68.6
MsaG012512 AT5G59780.1 54.348 46 21 0 95 140 1 46 1.12e-11 63.9
MsaG012512 AT3G46130.2 54.348 46 21 0 95 140 1 46 1.63e-11 63.9
MsaG012512 AT4G25560.2 53.333 45 21 0 96 140 3 47 6.29e-11 62.8

Find 132 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGATCCTTTCTTTAAATT+TGG 0.143322 3:-26102281 None:intergenic
GAACAATTGTTATTTGAATT+TGG 0.225333 3:-26104835 None:intergenic
CAGCCACCAAAGCCGGTTTC+TGG 0.233349 3:-26104664 None:intergenic
ATCTGCAGAAGACGCTATTT+TGG 0.270851 3:+26102148 MsaT012512.1:CDS
TGCCCATCTGTTTCCCATTT+CGG 0.272213 3:-26102342 None:intergenic
CAAAGCCGGTTTCTGGATAT+TGG 0.282709 3:-26104657 None:intergenic
TTTATCCCTTTACCATGTTC+AGG 0.293190 3:+26104474 MsaT012512.1:CDS
TGACAATTTGAAGGAAAATC+AGG 0.295404 3:+26104304 MsaT012512.1:CDS
TAACAGCATGGCACTCATTC+AGG 0.301452 3:-26104984 None:intergenic
TCGAGCGTGCCACTATTATT+TGG 0.311579 3:-26104784 None:intergenic
TTGCTCGCAAAGCGAACTTC+TGG 0.316678 3:-26104175 None:intergenic
CAGAAACCGGCTTTGGTGGC+TGG 0.325999 3:+26104665 MsaT012512.1:CDS
GATAAGACTGTACAATCTTT+CGG 0.331678 3:+26104508 MsaT012512.1:CDS
CAAGTGGAACAAACAAGAAT+TGG 0.336573 3:+26104450 MsaT012512.1:CDS
GGTAATGGAGGAAGTGTTAA+TGG 0.364177 3:+26102095 MsaT012512.1:CDS
CCCGATGACGCCTCTTGGTC+CGG 0.365400 3:-26104132 None:intergenic
TGTCTTCTTCTGATAAATAA+TGG 0.371278 3:-26104809 None:intergenic
TGCAATATTTGACAATTTGA+AGG 0.373979 3:+26104295 MsaT012512.1:CDS
CACTGTTTGGGGTAGAAACT+TGG 0.377211 3:-26105376 None:intergenic
TGCTCAACTCCATTCCGAAA+TGG 0.378343 3:+26102328 MsaT012512.1:CDS
AACGCTGTTCAGAAGCATTC+GGG 0.385357 3:+26102206 MsaT012512.1:CDS
TTCTCAGGCAAAATTGTAAT+AGG 0.388890 3:-26104335 None:intergenic
ATAATGAAATAAAGAACTAT+TGG 0.392597 3:+26104104 MsaT012512.1:CDS
AGAAACCGGCTTTGGTGGCT+GGG 0.403583 3:+26104666 MsaT012512.1:CDS
GGGGTAGAAACTTGGTCAAC+AGG 0.408150 3:-26105368 None:intergenic
ACTGACCCTGCATCTCCCTT+TGG 0.411283 3:+26104949 MsaT012512.1:CDS
TTTATCCCATGAGTTTGTAT+TGG 0.414468 3:-26105010 None:intergenic
TTGCATTCTCCTCTTGATCC+TGG 0.422314 3:+26104532 MsaT012512.1:CDS
GCTCAACTCCATTCCGAAAT+GGG 0.424645 3:+26102329 MsaT012512.1:CDS
ATGCTATTAGCAGAAATATC+AGG 0.424760 3:-26104359 None:intergenic
GAACGCTGTTCAGAAGCATT+CGG 0.427694 3:+26102205 MsaT012512.1:CDS
GAACTCTCACCTCCGTCAAC+AGG 0.428520 3:-26104889 None:intergenic
CCAAGAAAAGACATTGTTGA+TGG 0.435314 3:-26104425 None:intergenic
TTAAGGCCAAATTTAAAGAA+AGG 0.440027 3:+26102275 MsaT012512.1:CDS
TATCCAGAAACCGGCTTTGG+TGG 0.441737 3:+26104661 MsaT012512.1:CDS
GGAAGCATGGAGAAGGCAAC+TGG 0.444924 3:+26102183 MsaT012512.1:CDS
CCACATGGTGCGCAAGAGTC+CGG 0.446215 3:+26104751 MsaT012512.1:CDS
CAATATCCAGAAACCGGCTT+TGG 0.446614 3:+26104658 MsaT012512.1:CDS
AACTTCACAGCCTTGGATGT+TGG 0.448955 3:-26104620 None:intergenic
ATGATCCTGAACATGGTAAA+GGG 0.452424 3:-26104479 None:intergenic
GAAACCGGCTTTGGTGGCTG+GGG 0.453433 3:+26104667 MsaT012512.1:CDS
CCACATGCTTATAATCTGTT+GGG 0.454130 3:-26105511 None:intergenic
GCCACATGCTTATAATCTGT+TGG 0.455345 3:-26105512 None:intergenic
ATTATTTGGTGAAGAACAAC+CGG 0.458566 3:-26104770 None:intergenic
CGGTCGAATTGTGAGGGTAA+TGG 0.459783 3:+26102080 MsaT012512.1:CDS
AACATCCAAGGCTGTGAAGT+TGG 0.463269 3:+26104622 MsaT012512.1:CDS
TGTTCTTCACCAAATAATAG+TGG 0.463312 3:+26104775 MsaT012512.1:CDS
GTTGCACCAAAGGGAGATGC+AGG 0.466644 3:-26104955 None:intergenic
GCCAGCCCGATGACGCCTCT+TGG 0.468187 3:-26104137 None:intergenic
CCCGGACCAAGAGGCGTCAT+CGG 0.469874 3:+26104131 MsaT012512.1:CDS
CCGGACCAAGAGGCGTCATC+GGG 0.470564 3:+26104132 MsaT012512.1:CDS
ACCACCCCAGCCACCAAAGC+CGG 0.479091 3:-26104671 None:intergenic
GCAGAAATATCAGGATTCTC+AGG 0.482477 3:-26104350 None:intergenic
ACCAAGAGGCGTCATCGGGC+TGG 0.485549 3:+26104136 MsaT012512.1:CDS
GATTGGCATGAGCAGTGCTA+TGG 0.486316 3:+26105455 MsaT012512.1:CDS
GGGACTTATTCTTCAAGTAC+AGG 0.486682 3:+26105539 MsaT012512.1:CDS
GGTGGAGTTGTTCTGAAGAA+AGG 0.488612 3:+26102116 MsaT012512.1:CDS
TGAGATGGGCAAATCACTTA+AGG 0.491691 3:+26102258 MsaT012512.1:CDS
TGAACATGAATGAGACAGAA+TGG 0.495262 3:+26104917 MsaT012512.1:CDS
TCACTCCAATATCCAGAAAC+CGG 0.496933 3:+26104652 MsaT012512.1:CDS
GACAATTTGAAGGAAAATCA+GGG 0.502694 3:+26104305 MsaT012512.1:CDS
AGAGGAATTGCCATTTGATA+CGG 0.505395 3:-26104588 None:intergenic
TACCGCCATTCCGTATCAAA+TGG 0.505543 3:+26104578 MsaT012512.1:CDS
CAGGATTGAGGTTGCACCAA+AGG 0.505711 3:-26104965 None:intergenic
TTGAGTTATGTGAGGAGACC+AGG 0.508037 3:-26104550 None:intergenic
TCTGAAGCTAACATGACATC+TGG 0.511041 3:-26105434 None:intergenic
ATCTGTTTCCCATTTCGGAA+TGG 0.514519 3:-26102337 None:intergenic
TATGATCCTGAACATGGTAA+AGG 0.521000 3:-26104480 None:intergenic
GAGCTCCAACTTCACAGCCT+TGG 0.521427 3:-26104627 None:intergenic
CCGATGACGCCTCTTGGTCC+GGG 0.523404 3:-26104131 None:intergenic
GTGGAGTTGTTCTGAAGAAA+GGG 0.523448 3:+26102117 MsaT012512.1:CDS
ACACCTGCTCAGAACTATAG+TGG 0.523752 3:+26105036 MsaT012512.1:CDS
GATGGCACAGAATTGCAATA+TGG 0.524831 3:-26104407 None:intergenic
GGGAAACAGATGGGCACGTA+TGG 0.525456 3:+26102349 MsaT012512.1:CDS
AGGATTGAGGTTGCACCAAA+GGG 0.525462 3:-26104964 None:intergenic
TTCGCTTTGCGAGCAATGAA+AGG 0.526779 3:+26104182 MsaT012512.1:CDS
ATGTCATGTTAGCTTCAGAT+TGG 0.528468 3:+26105438 MsaT012512.1:CDS
ATGGCACTCATTCAGGATTG+AGG 0.529262 3:-26104977 None:intergenic
TTAACACCAATACAAACTCA+TGG 0.531847 3:+26105004 MsaT012512.1:CDS
TCGCTTTGCGAGCAATGAAA+GGG 0.532667 3:+26104183 MsaT012512.1:CDS
GTTGACTACGTCAGGAAGCA+TGG 0.533184 3:+26102170 MsaT012512.1:CDS
TGTCTATGTTGAACATCACT+TGG 0.540716 3:+26105411 MsaT012512.1:CDS
TGTTGGGTTGTCACTAGCCT+CGG 0.544008 3:-26105495 None:intergenic
ATTCCGAAATGGGAAACAGA+TGG 0.547886 3:+26102339 MsaT012512.1:CDS
ATTGGCATGAGCAGTGCTAT+GGG 0.550093 3:+26105456 MsaT012512.1:CDS
TCTTGCGCACCATGTGGCAG+AGG 0.550222 3:-26104745 None:intergenic
ACAGATTATAAGCATGTGGC+TGG 0.550488 3:+26105515 MsaT012512.1:CDS
TTCCGAAATGGGAAACAGAT+GGG 0.553867 3:+26102340 MsaT012512.1:CDS
TGTTCAACATAGACAAAGAT+CGG 0.557533 3:-26105403 None:intergenic
GTGAGGAGACCAGGATCAAG+AGG 0.558152 3:-26104541 None:intergenic
TCTACTACAACTCCTGTTGA+CGG 0.564833 3:+26104877 MsaT012512.1:CDS
GGATGTTGGCTTAGAAGTAG+AGG 0.565927 3:-26104606 None:intergenic
ATTATAAGCATGTGGCTGGT+GGG 0.566498 3:+26105519 MsaT012512.1:CDS
GAACATGAATGAGACAGAAT+GGG 0.567198 3:+26104918 MsaT012512.1:CDS
TTGTTCTGAAGAAAGGGCCG+TGG 0.569423 3:+26102123 MsaT012512.1:CDS
GTTTCTGGATATTGGAGTGA+AGG 0.574051 3:-26104649 None:intergenic
GATTATAAGCATGTGGCTGG+TGG 0.575177 3:+26105518 MsaT012512.1:CDS
CATTCGGGCTTGTCTCGTTG+TGG 0.575251 3:+26102221 MsaT012512.1:CDS
AATTGCCATTTGATACGGAA+TGG 0.575303 3:-26104583 None:intergenic
AGTGATTTGCCCATCTCAGA+CGG 0.575929 3:-26102253 None:intergenic
TACGTCAGGAAGCATGGAGA+AGG 0.579724 3:+26102176 MsaT012512.1:CDS
TACTTCTAAGCCAACATCCA+AGG 0.580718 3:+26104610 MsaT012512.1:CDS
CAGAACTATGATCCTGAACA+TGG 0.580858 3:-26104486 None:intergenic
AGGATCATTTACTGCTGATG+AGG 0.581122 3:+26102295 MsaT012512.1:CDS
CGAACTTCTGGAGGATAGAG+TGG 0.583188 3:-26104163 None:intergenic
CTCGCAAAGCGAACTTCTGG+AGG 0.584443 3:-26104172 None:intergenic
TAAAGAACTATTGGAATACC+CGG 0.592308 3:+26104113 MsaT012512.1:CDS
TAACCACTATAGTTCTGAGC+AGG 0.593277 3:-26105039 None:intergenic
TTGTATTGGTGTTAACAGCA+TGG 0.595840 3:-26104996 None:intergenic
GGACTTATTCTTCAAGTACA+GGG 0.596006 3:+26105540 MsaT012512.1:CDS
AAATAATAGTGGCACGCTCG+AGG 0.597636 3:+26104786 MsaT012512.1:CDS
ACGGTCACGGTCGAATTGTG+AGG 0.606038 3:+26102073 MsaT012512.1:CDS
AATCAGTCTCCTCTGCCACA+TGG 0.606298 3:+26104736 MsaT012512.1:CDS
TAACACCAATACAAACTCAT+GGG 0.608765 3:+26105005 MsaT012512.1:CDS
TGCTCTGCAACGATCAATCA+CGG 0.609079 3:+26102054 MsaT012512.1:CDS
GCAACGATCAATCACGGTCA+CGG 0.611923 3:+26102060 MsaT012512.1:CDS
GCGTCTTCTGCAGATGTCCA+CGG 0.613237 3:-26102140 None:intergenic
ATTTCATTATCTGTACGACC+AGG 0.614489 3:-26104091 None:intergenic
AATGGAGGAAGTGTTAATGG+TGG 0.626822 3:+26102098 MsaT012512.1:CDS
GGCACAGAATTGCAATATGG+AGG 0.628604 3:-26104404 None:intergenic
TCGAATTGTGAGGGTAATGG+AGG 0.645646 3:+26102083 MsaT012512.1:CDS
CCCAACAGATTATAAGCATG+TGG 0.647208 3:+26105511 MsaT012512.1:CDS
CGGTCACGGTCGAATTGTGA+GGG 0.647751 3:+26102074 MsaT012512.1:CDS
GACTTATTCTTCAAGTACAG+GGG 0.651682 3:+26105541 MsaT012512.1:CDS
TGCCATTTGATACGGAATGG+CGG 0.662997 3:-26104580 None:intergenic
ATTGGAATACCCGGACCAAG+AGG 0.666025 3:+26104122 MsaT012512.1:CDS
ACTTATTCTTCAAGTACAGG+GGG 0.671833 3:+26105542 MsaT012512.1:CDS
GTAATACATTGAGTTATGTG+AGG 0.673229 3:-26104558 None:intergenic
CCGGACTCTTGCGCACCATG+TGG 0.683210 3:-26104751 None:intergenic
TTGCACCAAAGGGAGATGCA+GGG 0.696277 3:-26104954 None:intergenic
ACTACAACTCCTGTTGACGG+AGG 0.707521 3:+26104880 MsaT012512.1:CDS
GCACGAGAAGAACATGACCG+AGG 0.769618 3:+26105478 MsaT012512.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 26102020 26105586 26102020 ID=MsaG012512
Chr3 mRNA 26102020 26105586 26102020 ID=MsaT012512.1;Parent=MsaG012512
Chr3 exon 26102020 26102379 26102020 ID=MsaT012512.1.exon1;Parent=MsaT012512.1
Chr3 CDS 26102020 26102379 26102020 ID=cds.MsaT012512.1;Parent=MsaT012512.1
Chr3 exon 26104088 26104206 26104088 ID=MsaT012512.1.exon2;Parent=MsaT012512.1
Chr3 CDS 26104088 26104206 26104088 ID=cds.MsaT012512.1;Parent=MsaT012512.1
Chr3 exon 26104250 26104688 26104250 ID=MsaT012512.1.exon3;Parent=MsaT012512.1
Chr3 CDS 26104250 26104688 26104250 ID=cds.MsaT012512.1;Parent=MsaT012512.1
Chr3 exon 26104721 26105057 26104721 ID=MsaT012512.1.exon4;Parent=MsaT012512.1
Chr3 CDS 26104721 26105057 26104721 ID=cds.MsaT012512.1;Parent=MsaT012512.1
Chr3 exon 26105348 26105586 26105348 ID=MsaT012512.1.exon5;Parent=MsaT012512.1
Chr3 CDS 26105348 26105586 26105348 ID=cds.MsaT012512.1;Parent=MsaT012512.1
Gene Sequence

>MsaT012512.1

ATGAGTCGAGTGAAAAATGAGATTGAAGATGATATGCTCTGCAACGATCAATCACGGTCACGGTCGAATTGTGAGGGTAATGGAGGAAGTGTTAATGGTGGAGTTGTTCTGAAGAAAGGGCCGTGGACATCTGCAGAAGACGCTATTTTGGTTGACTACGTCAGGAAGCATGGAGAAGGCAACTGGAACGCTGTTCAGAAGCATTCGGGCTTGTCTCGTTGTGGAAAAAGTTGCCGTCTGAGATGGGCAAATCACTTAAGGCCAAATTTAAAGAAAGGATCATTTACTGCTGATGAGGAGCATTTGATTGCTCAACTCCATTCCGAAATGGGAAACAGATGGGCACGTATGGCTGCGCACTTGCCTGGTCGTACAGATAATGAAATAAAGAACTATTGGAATACCCGGACCAAGAGGCGTCATCGGGCTGGCTTGCCACTCTATCCTCCAGAAGTTCGCTTTGCGAGCAATGAAAGGGAAGGGCATCATGATTTCTTGCCGAAAAACAACTATGAGATGCATGATGCAATATTTGACAATTTGAAGGAAAATCAGGGAATCTTACCTATTACAATTTTGCCTGAGAATCCTGATATTTCTGCTAATAGCATTATGCGAAACAGTCTTGATTCTCCTCCATATTGCAATTCTGTGCCATCAACAATGTCTTTTCTTGGTTCAAGTGGAACAAACAAGAATTGGTTTTATCCCTTTACCATGTTCAGGATCATAGTTCTGATAAGACTGTACAATCTTTCGGATTGCATTCTCCTCTTGATCCTGGTCTCCTCACATAACTCAATGTATTACCGCCATTCCGTATCAAATGGCAATTCCTCTACTTCTAAGCCAACATCCAAGGCTGTGAAGTTGGAGCTCCTTCACTCCAATATCCAGAAACCGGCTTTGGTGGCTGGGTCTGTTGATGTATTCAATCAGTCTCCTCTGCCACATGGTGCGCAAGAGTCCGGTTGTTCTTCACCAAATAATAGTGGCACGCTCGAGGCCATTATTTATCAGAAGAAGACACTTCCAAATTCAAATAACAATTGTTCTGACAAGAGTTCACATTCATCTACTACAACTCCTGTTGACGGAGGTGAGAGTTCTGCTTTGAACATGAATGAGACAGAATGGGATGACTACACTGACCCTGCATCTCCCTTTGGTGCAACCTCAATCCTGAATGAGTGCCATGCTGTTAACACCAATACAAACTCATGGGATAAATTGACACCTGCTCAGAACTATAGTGGCAGCAATGTTAAATATGAGCCTGTTGACCAAGTTTCTACCCCAAACAGTGAAAACCGATCTTTGTCTATGTTGAACATCACTTGGCCAGATGTCATGTTAGCTTCAGATTGGCATGAGCAGTGCTATGGGCACGAGAAGAACATGACCGAGGCTAGTGACAACCCAACAGATTATAAGCATGTGGCTGGTGGGACTTATTCTTCAAGTACAGGGGGTCGCTTTATGCACATGGCATGA
Protein sequence

>MsaT012512.1

MSRVKNEIEDDMLCNDQSRSRSNCEGNGGSVNGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGSFTADEEHLIAQLHSEMGNRWARMAAHLPGRTDNEIKNYWNTRTKRRHRAGLPLYPPEVRFASNEREGHHDFLPKNNYEMHDAIFDNLKENQGILPITILPENPDISANSIMRNSLDSPPYCNSVPSTMSFLGSSGTNKNWFYPFTMFRIIVLIRLYNLSDCILLLILVSSHNSMYYRHSVSNGNSSTSKPTSKAVKLELLHSNIQKPALVAGSVDVFNQSPLPHGAQESGCSSPNNSGTLEAIIYQKKTLPNSNNNCSDKSSHSSTTTPVDGGESSALNMNETEWDDYTDPASPFGATSILNECHAVNTNTNSWDKLTPAQNYSGSNVKYEPVDQVSTPNSENRSLSMLNITWPDVMLASDWHEQCYGHEKNMTEASDNPTDYKHVAGGTYSSSTGGRFMHMA*