AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG013212

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG013212 MtrunA17_Chr1g0154031 52.792 394 121 12 3 351 40 413 5.52e-108 322
MsaG013212 MtrunA17_Chr3g0080861 72.650 117 32 0 41 157 37 153 3.37e-58 196
MsaG013212 MtrunA17_Chr8g0354661 65.101 149 40 3 9 156 15 152 9.03e-58 196
MsaG013212 MtrunA17_Chr3g0099131 70.940 117 34 0 39 155 39 155 3.23e-55 189
MsaG013212 MtrunA17_Chr2g0322521 67.227 119 39 0 41 159 29 147 4.74e-49 169
MsaG013212 MtrunA17_Chr1g0192411 52.903 155 65 3 41 194 12 159 6.93e-47 164
MsaG013212 MtrunA17_Chr4g0039971 63.551 107 39 0 38 144 10 116 7.70e-45 157
MsaG013212 MtrunA17_Chr5g0395281 62.617 107 40 0 38 144 9 115 8.66e-44 153
MsaG013212 MtrunA17_Chr5g0440781 46.452 155 73 3 42 195 13 158 2.79e-43 148
MsaG013212 MtrunA17_Chr3g0115821 60.748 107 42 0 38 144 9 115 8.26e-43 151
MsaG013212 MtrunA17_Chr1g0193371 51.852 135 58 1 41 168 12 146 8.38e-43 152
MsaG013212 MtrunA17_Chr5g0440761 46.452 155 73 3 42 195 13 158 8.70e-43 149
MsaG013212 MtrunA17_Chr5g0441141 46.452 155 73 3 42 195 13 158 9.70e-43 149
MsaG013212 MtrunA17_Chr7g0274581 53.175 126 58 1 41 166 12 136 1.15e-42 147
MsaG013212 MtrunA17_Chr1g0193801 42.473 186 88 3 41 207 12 197 1.20e-42 152
MsaG013212 MtrunA17_Chr7g0261281 53.191 141 61 2 41 181 12 147 1.41e-42 149
MsaG013212 MtrunA17_Chr5g0410961 60.748 107 42 0 38 144 9 115 1.99e-42 150
MsaG013212 MtrunA17_Chr1g0203411 57.798 109 46 0 41 149 12 120 3.71e-42 148
MsaG013212 MtrunA17_Chr1g0187761 50.376 133 66 0 41 173 12 144 4.40e-42 147
MsaG013212 MtrunA17_Chr2g0309911 59.615 104 42 0 41 144 11 114 5.03e-42 149
MsaG013212 MtrunA17_Chr1g0186061 60.550 109 43 0 38 146 17 125 1.46e-41 145
MsaG013212 MtrunA17_Chr1g0167691 59.615 104 42 0 41 144 12 115 1.53e-41 145
MsaG013212 MtrunA17_Chr4g0022931 53.782 119 55 0 41 159 13 131 2.12e-41 145
MsaG013212 MtrunA17_Chr2g0281071 60.577 104 41 0 41 144 13 116 2.15e-41 147
MsaG013212 MtrunA17_Chr7g0270891 50.993 151 58 4 41 181 12 156 2.55e-41 148
MsaG013212 MtrunA17_Chr4g0022911 55.000 120 53 1 41 160 13 131 5.27e-41 145
MsaG013212 MtrunA17_Chr1g0167661 49.315 146 70 2 41 182 12 157 6.40e-41 144
MsaG013212 MtrunA17_Chr4g0048511 59.615 104 42 0 41 144 13 116 9.49e-41 146
MsaG013212 MtrunA17_Chr8g0349261 60.000 105 41 1 41 144 13 117 1.08e-40 144
MsaG013212 MtrunA17_Chr1g0168661 54.472 123 51 1 29 146 4 126 1.26e-40 143
MsaG013212 MtrunA17_Chr2g0323411 60.577 104 41 0 41 144 12 115 2.25e-40 144
MsaG013212 MtrunA17_Chr4g0022901 55.085 118 52 1 41 158 13 129 2.84e-40 143
MsaG013212 MtrunA17_Chr6g0450101 59.434 106 43 0 41 146 14 119 3.44e-40 140
MsaG013212 MtrunA17_Chr4g0037141 55.372 121 50 2 43 163 14 130 6.52e-40 142
MsaG013212 MtrunA17_Chr1g0209661 51.969 127 57 2 38 164 24 146 6.78e-40 143
MsaG013212 MtrunA17_Chr7g0228231 58.491 106 44 0 41 146 14 119 6.89e-40 140
MsaG013212 MtrunA17_Chr7g0271241 62.245 98 37 0 41 138 12 109 1.10e-39 144
MsaG013212 MtrunA17_Chr2g0328771 56.604 106 46 0 41 146 20 125 1.39e-39 142
MsaG013212 MtrunA17_Chr1g0211161 58.654 104 43 0 41 144 13 116 1.48e-39 139
MsaG013212 MtrunA17_Chr4g0032401 57.547 106 45 0 41 146 17 122 2.11e-39 142
MsaG013212 MtrunA17_Chr4g0022881 56.075 107 47 0 42 148 13 119 2.30e-39 139
MsaG013212 MtrunA17_Chr4g0058631 59.615 104 42 0 41 144 12 115 2.78e-39 142
MsaG013212 MtrunA17_Chr8g0346561 56.481 108 47 0 41 148 12 119 7.04e-39 140
MsaG013212 MtrunA17_Chr3g0099141 69.318 88 27 0 38 125 37 124 7.86e-39 135
MsaG013212 MtrunA17_Chr8g0385321 59.804 102 41 0 43 144 14 115 9.46e-39 140
MsaG013212 MtrunA17_Chr2g0323351 56.481 108 47 0 41 148 12 119 1.03e-38 138
MsaG013212 MtrunA17_Chr3g0117091 58.654 104 43 0 41 144 12 115 1.11e-38 140
MsaG013212 MtrunA17_Chr1g0194301 56.604 106 46 0 41 146 33 138 1.20e-38 139
MsaG013212 MtrunA17_Chr3g0131121 59.804 102 41 0 43 144 14 115 1.52e-38 139
MsaG013212 MtrunA17_Chr8g0387421 56.604 106 46 0 41 146 12 117 1.58e-38 139
MsaG013212 MtrunA17_Chr7g0217741 55.769 104 46 0 41 144 12 115 1.63e-38 139
MsaG013212 MtrunA17_Chr4g0070611 50.806 124 58 1 41 164 12 132 2.02e-38 139
MsaG013212 MtrunA17_Chr8g0342541 56.190 105 46 0 41 145 12 116 2.80e-38 139
MsaG013212 MtrunA17_Chr2g0330041 56.731 104 45 0 41 144 12 115 3.11e-38 140
MsaG013212 MtrunA17_Chr8g0342521 40.678 177 95 2 41 207 12 188 3.64e-38 139
MsaG013212 MtrunA17_Chr4g0070641 55.660 106 47 0 41 146 12 117 3.76e-38 134
MsaG013212 MtrunA17_Chr4g0042671 57.692 104 44 0 41 144 12 115 4.49e-38 140
MsaG013212 MtrunA17_Chr7g0275911 54.717 106 48 0 41 146 12 117 4.98e-38 136
MsaG013212 MtrunA17_Chr4g0068061 55.238 105 47 0 41 145 12 116 6.04e-38 138
MsaG013212 MtrunA17_Chr3g0088461 51.282 117 57 0 30 146 11 127 6.44e-38 138
MsaG013212 MtrunA17_Chr3g0121241 42.197 173 92 2 41 206 42 213 7.91e-38 137
MsaG013212 MtrunA17_Chr7g0217221 54.717 106 48 0 41 146 12 117 1.07e-37 136
MsaG013212 MtrunA17_Chr5g0441131 50.000 124 61 1 42 164 10 133 1.08e-37 133
MsaG013212 MtrunA17_Chr2g0311221 61.616 99 38 0 41 139 14 112 1.21e-37 137
MsaG013212 MtrunA17_Chr1g0194291 51.695 118 57 0 29 146 9 126 1.68e-37 135
MsaG013212 MtrunA17_Chr5g0434571 46.853 143 75 1 41 183 48 189 1.85e-37 137
MsaG013212 MtrunA17_Chr4g0057031 56.731 104 45 0 41 144 12 115 2.26e-37 135
MsaG013212 MtrunA17_Chr3g0110351 55.660 106 47 0 41 146 12 117 2.75e-37 136
MsaG013212 MtrunA17_Chr5g0397231 58.586 99 41 0 41 139 12 110 5.05e-37 136
MsaG013212 MtrunA17_Chr6g0453471 55.769 104 46 0 41 144 12 115 7.06e-37 136
MsaG013212 MtrunA17_Chr5g0435101 51.429 105 51 0 40 144 10 114 1.28e-36 131
MsaG013212 MtrunA17_Chr6g0452271 44.681 141 77 1 40 180 11 150 1.52e-36 134
MsaG013212 MtrunA17_Chr6g0453211 57.576 99 42 0 41 139 12 110 1.60e-36 134
MsaG013212 MtrunA17_Chr8g0342481 48.921 139 57 4 41 165 12 150 2.00e-36 135
MsaG013212 MtrunA17_Chr4g0060721 48.800 125 60 1 41 161 13 137 2.42e-36 134
MsaG013212 MtrunA17_Chr8g0334881 50.877 114 55 1 34 146 3 116 3.21e-36 133
MsaG013212 MtrunA17_Chr7g0254411 55.769 104 46 0 41 144 12 115 4.37e-36 133
MsaG013212 MtrunA17_Chr4g0022891 48.062 129 65 2 41 168 12 139 5.65e-36 130
MsaG013212 MtrunA17_Chr3g0103281 54.286 105 48 0 40 144 11 115 5.96e-36 133
MsaG013212 MtrunA17_Chr1g0194951 54.808 104 47 0 41 144 12 115 6.19e-36 134
MsaG013212 MtrunA17_Chr3g0092401 51.887 106 51 0 41 146 13 118 7.26e-36 132
MsaG013212 MtrunA17_Chr4g0013361 51.724 116 54 2 39 153 8 122 8.83e-36 132
MsaG013212 MtrunA17_Chr7g0228891 46.377 138 70 2 41 178 12 145 1.01e-35 130
MsaG013212 MtrunA17_Chr5g0417821 56.731 104 45 0 41 144 7 110 1.55e-35 130
MsaG013212 MtrunA17_Chr1g0180391 41.250 160 90 2 39 198 17 172 2.54e-35 129
MsaG013212 MtrunA17_Chr4g0044421 54.902 102 46 0 43 144 14 115 4.77e-35 127
MsaG013212 MtrunA17_Chr1g0151941 44.203 138 63 2 41 164 12 149 4.80e-35 128
MsaG013212 MtrunA17_Chr8g0343831 53.846 104 48 0 41 144 8 111 9.76e-35 127
MsaG013212 MtrunA17_Chr1g0203441 55.769 104 46 0 42 145 14 117 2.15e-34 127
MsaG013212 MtrunA17_Chr1g0152011 51.852 108 51 1 38 144 9 116 4.78e-34 128
MsaG013212 MtrunA17_Chr4g0028311 42.105 152 85 3 40 188 11 162 7.69e-34 127
MsaG013212 MtrunA17_Chr4g0055981 40.244 164 84 4 40 195 54 211 9.80e-34 124
MsaG013212 MtrunA17_Chr6g0470971 53.398 103 48 0 42 144 15 117 1.32e-33 125
MsaG013212 MtrunA17_Chr5g0400821 45.802 131 67 2 38 167 9 136 2.23e-33 125
MsaG013212 MtrunA17_Chr3g0135311 50.000 108 53 1 38 144 9 116 4.15e-33 125
MsaG013212 MtrunA17_Chr2g0293911 55.963 109 48 0 38 146 21 129 4.57e-33 125
MsaG013212 MtrunA17_Chr4g0054391 45.802 131 69 2 38 167 9 138 6.97e-33 124
MsaG013212 MtrunA17_Chr7g0269831 56.190 105 46 0 41 145 12 116 8.13e-33 125
MsaG013212 MtrunA17_Chr4g0068921 57.282 103 44 0 41 143 24 126 1.66e-32 120
MsaG013212 MtrunA17_Chr2g0327821 50.943 106 52 0 41 146 6 111 1.84e-32 121
MsaG013212 MtrunA17_Chr2g0327351 47.692 130 62 2 38 161 9 138 1.41e-31 121
MsaG013212 MtrunA17_Chr4g0030881 50.000 110 48 1 42 144 8 117 4.88e-31 118
MsaG013212 MtrunA17_Chr7g0247131 64.000 75 27 0 73 147 10 84 5.74e-31 118
MsaG013212 MtrunA17_Chr5g0434841 51.429 105 51 0 41 145 20 124 7.06e-31 119
MsaG013212 MtrunA17_Chr7g0264641 45.946 111 59 1 38 147 9 119 1.71e-30 117
MsaG013212 MtrunA17_Chr4g0072751 50.485 103 50 1 38 139 9 111 2.07e-30 118
MsaG013212 MtrunA17_Chr8g0360111 49.505 101 51 0 39 139 23 123 2.62e-30 116
MsaG013212 MtrunA17_Chr5g0434831 48.571 105 54 0 41 145 7 111 9.70e-30 112
MsaG013212 MtrunA17_Chr6g0487491 46.552 116 53 2 41 147 12 127 1.32e-29 114
MsaG013212 MtrunA17_Chr5g0434931 47.115 104 55 0 41 144 35 138 1.42e-29 114
MsaG013212 MtrunA17_Chr7g0220341 42.742 124 64 2 41 162 25 143 1.82e-29 114
MsaG013212 MtrunA17_Chr5g0434911 48.077 104 54 0 41 144 21 124 1.93e-29 114
MsaG013212 MtrunA17_Chr7g0240821 47.059 102 54 0 46 147 6 107 5.91e-29 112
MsaG013212 MtrunA17_Chr7g0228991 43.089 123 62 1 31 145 11 133 4.00e-28 110
MsaG013212 MtrunA17_Chr5g0429661 47.059 119 59 3 30 146 109 225 1.21e-27 111
MsaG013212 MtrunA17_Chr5g0401731 50.980 102 49 1 43 144 15 115 3.93e-27 109
MsaG013212 MtrunA17_Chr7g0238631 51.923 104 49 1 41 144 111 213 6.92e-27 111
MsaG013212 MtrunA17_Chr3g0133601 48.039 102 52 1 43 144 37 137 7.97e-27 106
MsaG013212 MtrunA17_Chr7g0228531 49.123 114 51 3 40 148 217 328 3.78e-26 108
MsaG013212 MtrunA17_Chr6g0454921 45.902 122 59 2 43 158 15 135 4.33e-26 103
MsaG013212 MtrunA17_Chr4g0058991 48.276 116 52 4 41 150 207 320 7.20e-26 107
MsaG013212 MtrunA17_Chr4g0008551 51.456 103 47 2 43 144 38 138 1.28e-25 105
MsaG013212 MtrunA17_Chr2g0323321 46.316 95 45 1 31 125 7 95 3.00e-25 98.6
MsaG013212 MtrunA17_Chr3g0117511 36.872 179 85 5 43 194 183 360 3.67e-25 105
MsaG013212 MtrunA17_Chr1g0157731 40.278 144 85 1 41 184 89 231 3.76e-25 107
MsaG013212 MtrunA17_Chr5g0395221 51.852 81 39 0 37 117 8 88 8.27e-25 96.3
MsaG013212 MtrunA17_Chr4g0053431 47.059 102 53 1 43 144 5 105 2.00e-24 100
MsaG013212 MtrunA17_Chr4g0042611 53.247 77 36 0 41 117 12 88 3.08e-24 94.7
MsaG013212 MtrunA17_Chr5g0437321 48.113 106 52 2 36 139 10 114 4.35e-24 100
MsaG013212 MtrunA17_Chr2g0294811 48.837 86 44 0 40 125 11 96 5.60e-24 95.1
MsaG013212 MtrunA17_Chr7g0228481 38.068 176 87 6 40 195 217 390 7.84e-24 101
MsaG013212 MtrunA17_Chr3g0139671 44.037 109 60 1 41 149 83 190 8.02e-24 102
MsaG013212 MtrunA17_Chr7g0254261 33.628 226 117 7 22 243 67 263 1.49e-23 99.8
MsaG013212 MtrunA17_Chr5g0425591 52.439 82 38 1 42 122 10 91 1.98e-23 92.8
MsaG013212 MtrunA17_Chr5g0417621 37.975 158 91 4 27 183 121 272 3.98e-23 99.8
MsaG013212 MtrunA17_Chr8g0342511 52.632 76 36 0 41 116 12 87 5.27e-23 92.0
MsaG013212 MtrunA17_Chr4g0042501 41.129 124 70 2 30 152 92 213 6.74e-23 99.0
MsaG013212 MtrunA17_Chr6g0453751 46.429 112 47 3 20 122 3 110 9.13e-23 92.4
MsaG013212 MtrunA17_Chr8g0342531 48.750 80 41 0 41 120 12 91 1.02e-22 93.2
MsaG013212 MtrunA17_Chr6g0480581 40.909 110 64 1 43 152 4 112 1.06e-21 92.4
MsaG013212 MtrunA17_Chr3g0125801 46.296 108 55 2 40 146 13 118 3.68e-21 92.0
MsaG013212 MtrunA17_Chr8g0342461 46.914 81 42 1 41 120 12 92 3.88e-21 88.2
MsaG013212 MtrunA17_Chr8g0342471 46.914 81 42 1 41 120 12 92 1.11e-20 87.0
MsaG013212 MtrunA17_Chr5g0397841 47.959 98 50 1 41 138 108 204 1.18e-20 92.8
MsaG013212 MtrunA17_Chr6g0460661 40.187 107 63 1 43 149 16 121 1.22e-20 87.4
MsaG013212 MtrunA17_Chr7g0228401 48.837 86 43 1 54 139 290 374 1.30e-20 92.8
MsaG013212 MtrunA17_Chr1g0177901 48.276 87 44 1 53 139 4 89 4.57e-20 87.4
MsaG013212 MtrunA17_Chr1g0193901 58.333 84 33 2 41 122 11 94 6.35e-20 84.0
MsaG013212 MtrunA17_Chr1g0193891 58.333 84 33 2 41 122 11 94 6.35e-20 84.0
MsaG013212 MtrunA17_Chr1g0193871 58.333 84 33 2 41 122 11 94 6.35e-20 84.0
MsaG013212 MtrunA17_Chr1g0193881 58.333 84 33 2 41 122 11 94 6.35e-20 84.0
MsaG013212 MtrunA17_Chr7g0233061 40.833 120 57 4 43 159 180 288 8.32e-20 89.4
MsaG013212 MtrunA17_Chr7g0229101 51.429 70 34 0 73 142 4 73 3.86e-19 84.7
MsaG013212 MtrunA17_Chr7g0238651 39.623 106 62 1 43 146 7 112 6.15e-19 86.7
MsaG013212 MtrunA17_Chr6g0460671 33.803 142 91 2 43 182 99 239 7.39e-19 86.7
MsaG013212 MtrunA17_Chr8g0362231 33.103 145 89 3 46 189 25 162 1.17e-18 86.7
MsaG013212 MtrunA17_Chr7g0229131 50.704 71 35 0 73 143 4 74 1.74e-18 82.0
MsaG013212 MtrunA17_Chr3g0093811 50.000 72 36 0 73 144 14 85 5.15e-18 82.8
MsaG013212 MtrunA17_Chr5g0434901 52.308 65 31 0 75 139 7 71 1.62e-17 77.8
MsaG013212 MtrunA17_Chr5g0416341 38.235 102 60 2 46 146 29 128 2.67e-16 79.7
MsaG013212 MtrunA17_Chr7g0233161 39.326 89 40 2 7 95 276 350 2.08e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG013212 AT2G26960.1 49.761 209 96 4 28 232 7 210 2.56e-60 200
MsaG013212 AT3G11440.2 73.554 121 32 0 35 155 35 155 1.47e-59 199
MsaG013212 AT3G11440.3 73.554 121 32 0 35 155 35 155 1.56e-58 198
MsaG013212 AT3G11440.4 73.554 121 32 0 35 155 35 155 1.56e-58 198
MsaG013212 AT3G11440.1 73.554 121 32 0 35 155 35 155 1.56e-58 198
MsaG013212 AT5G06100.1 67.424 132 43 0 24 155 15 146 3.44e-58 195
MsaG013212 AT5G06100.5 67.424 132 43 0 24 155 15 146 2.85e-57 194
MsaG013212 AT5G06100.2 67.424 132 43 0 24 155 15 146 2.85e-57 194
MsaG013212 AT5G06100.3 67.424 132 43 0 24 155 15 146 2.85e-57 194
MsaG013212 AT5G06100.4 67.424 132 43 0 24 155 15 146 2.85e-57 194
MsaG013212 AT4G26930.1 65.116 129 45 0 27 155 5 133 2.74e-55 186
MsaG013212 AT2G32460.2 65.354 127 40 1 33 159 2 124 3.61e-55 187
MsaG013212 AT2G32460.1 65.873 126 39 1 34 159 15 136 4.67e-55 187
MsaG013212 AT5G55020.1 68.067 119 38 0 37 155 22 140 5.95e-54 186
MsaG013212 AT3G61250.1 62.500 104 39 0 41 144 12 115 1.93e-44 155
MsaG013212 AT5G16770.4 61.682 107 41 0 38 144 9 115 2.27e-43 153
MsaG013212 AT5G16770.3 61.682 107 41 0 38 144 9 115 2.27e-43 153
MsaG013212 AT3G02940.2 61.682 107 41 0 38 144 9 115 2.76e-43 152
MsaG013212 AT5G16770.1 61.682 107 41 0 38 144 9 115 3.07e-43 152
MsaG013212 AT5G16770.2 61.682 107 41 0 38 144 9 115 3.07e-43 152
MsaG013212 AT5G65230.1 62.617 107 40 0 38 144 9 115 3.27e-43 152
MsaG013212 AT3G02940.1 61.682 107 41 0 38 144 9 115 4.45e-43 152
MsaG013212 AT3G02940.3 61.682 107 41 0 38 144 9 115 4.45e-43 152
MsaG013212 AT3G27810.1 41.969 193 100 3 37 227 16 198 2.35e-42 147
MsaG013212 AT1G57560.1 42.162 185 98 3 41 220 12 192 2.56e-42 150
MsaG013212 AT4G21440.1 59.813 107 43 0 38 144 9 115 4.92e-42 150
MsaG013212 AT3G23250.1 47.020 151 80 0 41 191 12 162 6.76e-42 148
MsaG013212 AT1G09540.1 59.434 106 43 0 41 146 12 117 1.31e-41 149
MsaG013212 AT1G57560.2 60.577 104 41 0 41 144 12 115 1.33e-41 147
MsaG013212 AT5G26660.1 59.434 106 43 0 41 146 12 117 2.99e-41 148
MsaG013212 AT4G28110.1 60.577 104 41 0 41 144 12 115 3.43e-41 146
MsaG013212 AT3G01530.1 56.364 110 48 0 38 147 22 131 4.14e-41 143
MsaG013212 AT5G40350.1 39.320 206 114 4 38 238 14 213 4.72e-41 143
MsaG013212 AT4G05100.1 59.813 107 43 0 38 144 10 116 7.13e-41 146
MsaG013212 AT5G10280.1 58.879 107 44 0 38 144 9 115 8.24e-41 146
MsaG013212 AT1G34670.1 60.748 107 42 0 38 144 9 115 1.58e-40 146
MsaG013212 AT4G01680.3 59.434 106 43 0 41 146 12 117 2.81e-40 142
MsaG013212 AT3G24310.1 59.091 110 45 0 38 147 15 124 3.07e-40 143
MsaG013212 AT3G13540.1 50.794 126 58 1 40 165 22 143 3.66e-40 142
MsaG013212 AT3G12720.1 56.481 108 47 0 37 144 18 125 3.95e-40 144
MsaG013212 AT4G13480.1 60.952 105 41 0 42 146 7 111 5.69e-40 142
MsaG013212 AT4G01680.1 59.434 106 43 0 41 146 12 117 6.77e-40 144
MsaG013212 AT1G18570.1 59.813 107 43 0 38 144 10 116 6.87e-40 144
MsaG013212 AT4G38620.1 51.938 129 61 1 43 171 14 141 9.89e-40 142
MsaG013212 AT1G16490.1 48.322 149 76 1 41 189 14 161 1.13e-39 142
MsaG013212 AT2G31180.1 56.881 109 47 0 41 149 12 120 1.33e-39 140
MsaG013212 AT3G30210.1 47.945 146 72 1 42 187 28 169 1.38e-39 141
MsaG013212 AT4G34990.1 47.333 150 70 2 43 192 14 154 1.57e-39 141
MsaG013212 AT1G22640.1 56.731 104 45 0 41 144 12 115 1.59e-39 140
MsaG013212 AT5G60890.1 57.798 109 46 0 38 146 9 117 5.27e-39 140
MsaG013212 AT3G13890.2 56.731 104 45 0 41 144 12 115 5.36e-39 142
MsaG013212 AT5G07690.1 58.879 107 43 1 37 143 9 114 6.61e-39 141
MsaG013212 AT2G16720.1 45.455 154 67 3 41 192 12 150 8.85e-39 139
MsaG013212 AT5G61420.2 57.407 108 45 1 37 144 9 115 1.03e-38 141
MsaG013212 AT5G07700.1 57.407 108 45 1 37 144 9 115 1.13e-38 140
MsaG013212 AT5G07700.2 57.407 108 45 1 37 144 9 115 1.13e-38 140
MsaG013212 AT1G66230.1 45.806 155 75 2 41 186 12 166 1.17e-38 139
MsaG013212 AT5G12870.1 57.547 106 45 0 41 146 18 123 2.21e-38 138
MsaG013212 AT5G54230.1 55.769 104 46 0 41 144 12 115 2.31e-38 139
MsaG013212 AT1G35515.1 57.692 104 44 0 41 144 12 115 2.37e-38 136
MsaG013212 AT1G06180.1 59.615 104 42 0 41 144 12 115 2.82e-38 137
MsaG013212 AT3G01140.2 55.140 107 48 0 38 144 9 115 3.21e-38 140
MsaG013212 AT3G01140.1 55.140 107 48 0 38 144 52 158 6.47e-38 140
MsaG013212 AT5G14750.1 50.847 118 51 1 27 144 9 119 6.77e-38 135
MsaG013212 AT4G09460.1 56.863 102 44 0 43 144 14 115 6.78e-38 136
MsaG013212 AT1G08810.1 45.890 146 77 1 41 186 12 155 1.00e-37 137
MsaG013212 AT5G15310.4 55.769 104 46 0 41 144 12 115 1.09e-37 135
MsaG013212 AT5G15310.1 55.769 104 46 0 41 144 12 115 1.10e-37 138
MsaG013212 AT1G79180.1 57.692 104 44 0 41 144 14 117 1.10e-37 137
MsaG013212 AT1G63910.1 56.604 106 46 0 41 146 12 117 1.32e-37 139
MsaG013212 AT4G17785.1 56.731 104 45 0 41 144 13 116 1.36e-37 138
MsaG013212 AT4G17785.2 56.731 104 45 0 41 144 13 116 1.42e-37 138
MsaG013212 AT5G15310.2 55.769 104 46 0 41 144 12 115 1.43e-37 137
MsaG013212 AT3G47600.1 54.717 106 48 0 41 146 12 117 1.47e-37 137
MsaG013212 AT3G08500.1 53.097 113 53 0 34 146 23 135 2.52e-37 137
MsaG013212 AT1G68320.1 39.000 200 103 5 41 221 19 218 2.91e-37 135
MsaG013212 AT1G56160.1 55.769 104 46 0 41 144 14 117 3.12e-37 135
MsaG013212 AT5G49330.1 53.153 111 52 0 41 151 12 122 3.66e-37 137
MsaG013212 AT1G74080.1 59.223 103 42 0 41 143 12 114 4.22e-37 136
MsaG013212 AT5G40330.1 52.294 109 52 0 36 144 7 115 4.38e-37 133
MsaG013212 AT2G26950.1 50.833 120 59 0 40 159 15 134 4.80e-37 137
MsaG013212 AT3G28910.1 55.140 107 48 0 38 144 9 115 6.29e-37 135
MsaG013212 AT4G12350.1 34.978 223 134 5 41 256 12 230 6.45e-37 135
MsaG013212 AT5G62470.2 53.774 106 49 0 41 146 12 117 7.78e-37 136
MsaG013212 AT2G47190.1 53.211 109 51 0 38 146 17 125 9.43e-37 134
MsaG013212 AT4G22680.1 46.479 142 72 2 41 182 12 149 1.34e-36 133
MsaG013212 AT4G01680.2 53.390 118 43 1 41 146 12 129 1.75e-36 135
MsaG013212 AT5G16600.1 55.660 106 47 0 41 146 12 117 2.09e-36 134
MsaG013212 AT1G74650.1 54.808 104 47 0 41 144 12 115 3.14e-36 134
MsaG013212 AT3G13890.1 52.212 113 45 1 41 144 12 124 5.64e-36 134
MsaG013212 AT2G47460.1 53.846 104 48 0 41 144 12 115 7.87e-36 134
MsaG013212 AT1G48000.1 52.830 106 50 0 41 146 32 137 8.00e-36 130
MsaG013212 AT5G35550.1 54.808 104 47 0 41 144 14 117 8.43e-36 131
MsaG013212 AT5G52600.1 44.444 126 70 0 37 162 8 133 9.57e-36 129
MsaG013212 AT3G27920.1 53.398 103 48 0 42 144 15 117 1.88e-35 129
MsaG013212 AT3G60460.1 53.271 107 49 1 41 146 11 117 2.02e-35 131
MsaG013212 AT4G37780.1 38.286 175 97 3 40 205 11 183 2.24e-35 131
MsaG013212 AT5G62470.1 53.774 106 48 1 41 146 12 116 2.40e-35 132
MsaG013212 AT5G56110.1 53.333 105 49 0 40 144 11 115 2.88e-35 131
MsaG013212 AT1G25340.1 52.381 105 50 0 42 146 19 123 3.94e-35 130
MsaG013212 AT5G14340.1 54.717 106 48 0 41 146 24 129 6.30e-35 129
MsaG013212 AT3G28470.1 38.462 208 120 4 38 245 9 208 6.81e-35 130
MsaG013212 AT1G74430.1 51.923 104 50 0 41 144 12 115 1.44e-34 128
MsaG013212 AT3G62610.1 52.885 104 49 0 41 144 12 115 2.32e-34 129
MsaG013212 AT5G59780.3 53.333 105 49 0 42 146 9 113 5.87e-34 125
MsaG013212 AT3G48920.1 54.902 102 46 0 42 143 19 120 6.28e-34 126
MsaG013212 AT3G46130.1 51.327 113 54 1 42 153 10 122 8.16e-34 125
MsaG013212 AT3G12820.1 54.808 104 47 0 41 144 14 117 8.53e-34 125
MsaG013212 AT5G57620.1 51.852 108 51 1 38 144 9 116 2.04e-33 126
MsaG013212 AT5G62320.1 42.484 153 79 3 38 183 10 160 5.27e-33 123
MsaG013212 AT3G06490.1 51.639 122 59 0 25 146 3 124 5.96e-33 125
MsaG013212 AT1G18710.1 46.565 131 68 2 41 170 12 141 8.91e-33 123
MsaG013212 AT3G49690.1 50.926 108 52 1 38 144 9 116 2.38e-32 123
MsaG013212 AT3G53200.1 50.000 110 55 0 38 147 6 115 4.18e-32 120
MsaG013212 AT4G25560.1 52.427 103 49 0 42 144 11 113 6.88e-32 121
MsaG013212 AT3G27810.2 42.405 158 79 3 72 227 2 149 1.39e-31 117
MsaG013212 AT5G49620.1 54.128 109 50 0 38 146 23 131 1.90e-31 120
MsaG013212 AT1G79180.2 43.796 137 44 1 41 144 14 150 3.38e-31 120
MsaG013212 AT5G65790.1 50.000 108 53 1 38 144 9 116 3.72e-31 121
MsaG013212 AT1G66370.1 36.216 185 99 4 41 215 8 183 6.99e-31 117
MsaG013212 AT1G25340.2 49.524 105 48 1 42 146 19 118 1.05e-30 118
MsaG013212 AT5G58850.1 48.305 118 58 2 28 144 90 205 1.52e-30 120
MsaG013212 AT5G23000.1 49.524 105 52 1 41 144 12 116 1.77e-30 119
MsaG013212 AT1G25340.3 49.524 105 48 1 42 146 19 118 2.13e-30 118
MsaG013212 AT5G26660.2 67.123 73 24 0 74 146 14 86 4.00e-30 117
MsaG013212 AT2G36890.1 48.673 113 57 1 38 149 9 121 4.43e-30 117
MsaG013212 AT2G36890.2 48.673 113 57 1 38 149 50 162 6.88e-30 117
MsaG013212 AT5G52260.1 52.427 103 49 0 42 144 13 115 2.18e-29 114
MsaG013212 AT5G40350.2 38.824 170 93 4 74 238 5 168 4.03e-29 110
MsaG013212 AT5G11050.1 51.456 103 47 2 43 144 105 205 2.68e-28 114
MsaG013212 AT4G18770.1 48.598 107 54 1 38 144 212 317 3.64e-28 114
MsaG013212 AT5G49620.2 47.967 123 50 1 38 146 23 145 7.70e-28 111
MsaG013212 AT5G02320.1 52.885 104 48 1 41 144 125 227 9.81e-28 114
MsaG013212 AT5G02320.2 52.885 104 48 1 41 144 125 227 9.81e-28 114
MsaG013212 AT1G56650.1 46.789 109 58 0 36 144 3 111 1.05e-27 109
MsaG013212 AT1G66380.1 40.146 137 82 0 36 172 3 139 1.10e-27 106
MsaG013212 AT5G02320.3 52.885 104 48 1 41 144 65 167 1.46e-27 113
MsaG013212 AT2G23290.1 51.961 102 48 1 43 144 13 113 4.93e-27 108
MsaG013212 AT1G66390.1 46.789 109 58 0 36 144 3 111 8.03e-27 107
MsaG013212 AT3G09370.1 50.943 106 49 2 41 145 128 231 1.29e-26 110
MsaG013212 AT3G09370.2 50.943 106 49 2 41 145 133 236 1.36e-26 110
MsaG013212 AT3G09370.3 50.943 106 49 2 41 145 141 244 2.20e-26 110
MsaG013212 AT3G27785.1 47.273 110 56 2 38 146 184 292 3.70e-26 108
MsaG013212 AT4G37260.1 50.000 102 50 1 43 144 13 113 4.61e-26 106
MsaG013212 AT3G46130.3 57.317 82 34 1 73 153 9 90 6.12e-26 103
MsaG013212 AT4G33450.1 41.935 124 71 1 26 149 2 124 6.50e-26 104
MsaG013212 AT5G35550.2 38.710 155 61 5 53 202 43 168 8.52e-26 104
MsaG013212 AT3G09230.1 48.214 112 56 2 33 144 46 155 1.17e-25 106
MsaG013212 AT5G40360.1 44.660 103 56 1 41 143 156 257 1.18e-25 106
MsaG013212 AT3G46130.4 58.025 81 33 1 74 153 20 100 1.60e-25 103
MsaG013212 AT3G53200.2 60.811 74 29 0 74 147 9 82 1.77e-25 102
MsaG013212 AT5G59780.2 59.459 74 30 0 73 146 19 92 2.91e-25 102
MsaG013212 AT3G12820.2 66.176 68 23 0 77 144 2 69 3.04e-25 101
MsaG013212 AT1G69560.2 44.737 114 60 2 34 146 114 225 5.20e-25 104
MsaG013212 AT1G69560.1 44.737 114 60 2 34 146 98 209 5.87e-25 103
MsaG013212 AT4G32730.1 37.037 162 101 1 41 202 85 245 2.24e-24 105
MsaG013212 AT3G55730.1 48.544 103 50 2 43 144 56 156 2.71e-24 102
MsaG013212 AT4G32730.5 37.037 162 101 1 41 202 85 245 2.95e-24 104
MsaG013212 AT4G32730.4 37.037 162 101 1 41 202 85 245 2.95e-24 104
MsaG013212 AT4G32730.3 37.037 162 101 1 41 202 85 245 2.95e-24 104
MsaG013212 AT4G32730.2 37.037 162 101 1 41 202 85 245 2.95e-24 104
MsaG013212 AT3G50060.1 44.954 109 59 1 43 151 6 113 6.03e-24 100
MsaG013212 AT5G11510.3 35.260 173 107 3 41 213 79 246 6.31e-24 103
MsaG013212 AT5G11510.3 38.144 97 58 2 43 138 29 124 6.22e-12 67.4
MsaG013212 AT5G11510.1 35.260 173 107 3 41 213 79 246 6.31e-24 103
MsaG013212 AT5G11510.1 38.144 97 58 2 43 138 29 124 6.22e-12 67.4
MsaG013212 AT5G11510.4 35.260 173 107 3 41 213 79 246 6.31e-24 103
MsaG013212 AT5G11510.4 38.144 97 58 2 43 138 29 124 6.22e-12 67.4
MsaG013212 AT5G11510.5 35.260 173 107 3 41 213 79 246 6.53e-24 103
MsaG013212 AT5G11510.2 35.260 173 107 3 41 213 79 246 7.29e-24 103
MsaG013212 AT5G11510.2 38.144 97 58 2 43 138 29 124 7.86e-12 67.0
MsaG013212 AT5G17800.1 48.077 104 53 1 43 146 93 195 8.07e-24 100
MsaG013212 AT3G47600.2 57.534 73 31 0 74 146 39 111 9.95e-24 100
MsaG013212 AT2G39880.1 41.600 125 70 2 21 144 28 150 1.77e-23 100
MsaG013212 AT1G17950.1 44.643 112 59 2 43 153 5 114 2.74e-23 97.4
MsaG013212 AT1G26780.1 45.133 113 59 2 41 152 96 206 2.80e-23 98.2
MsaG013212 AT1G26780.2 45.133 113 59 2 41 152 96 206 3.11e-23 99.4
MsaG013212 AT5G67300.1 47.059 102 53 1 43 144 6 106 4.67e-23 98.2
MsaG013212 AT5G14750.3 50.633 79 34 1 71 144 7 85 7.58e-23 94.0
MsaG013212 AT3G29020.1 41.964 112 64 1 43 154 65 175 6.60e-22 93.2
MsaG013212 AT3G29020.2 41.964 112 64 1 43 154 67 177 7.81e-22 94.7
MsaG013212 AT4G00540.2 48.148 108 52 2 40 144 100 206 1.35e-21 95.5
MsaG013212 AT1G73410.1 47.619 105 52 2 43 146 6 108 1.52e-21 92.4
MsaG013212 AT4G00540.1 48.148 108 52 2 40 144 98 204 2.47e-21 95.1
MsaG013212 AT1G73410.2 47.619 105 52 2 43 146 6 108 2.88e-21 90.9
MsaG013212 AT2G25230.1 45.545 101 50 4 41 139 24 121 6.83e-20 87.8
MsaG013212 AT3G23250.2 42.308 104 60 0 88 191 2 105 1.56e-19 86.7
MsaG013212 AT1G66380.3 39.604 101 61 0 72 172 6 106 1.00e-18 80.9
MsaG013212 AT2G37630.1 38.318 107 64 1 42 146 3 109 8.03e-18 84.0
MsaG013212 AT1G18960.1 40.741 108 55 3 40 144 7 108 1.30e-17 82.8
MsaG013212 AT1G22640.3 59.649 57 23 0 88 144 2 58 1.50e-17 80.5
MsaG013212 AT5G40430.1 39.394 99 58 2 41 139 52 148 2.58e-16 78.2
MsaG013212 AT1G66380.2 45.588 68 37 0 36 103 3 70 1.25e-15 72.4
MsaG013212 AT1G14350.2 33.051 118 76 2 46 162 28 143 4.71e-15 76.3
MsaG013212 AT1G14350.1 33.051 118 76 2 46 162 28 143 4.71e-15 76.3
MsaG013212 AT5G39700.1 38.835 103 62 1 44 146 57 158 5.61e-15 73.2
MsaG013212 AT2G02820.2 35.294 102 63 2 46 146 33 132 9.96e-15 75.5
MsaG013212 AT1G71030.2 37.000 100 54 2 80 171 5 103 1.08e-14 72.0
MsaG013212 AT2G02820.1 35.294 102 63 2 46 146 33 132 1.44e-14 75.1
MsaG013212 AT1G71030.1 37.000 100 54 2 80 171 19 117 1.73e-14 71.6
MsaG013212 AT2G02820.3 35.294 102 63 2 46 146 33 132 2.49e-14 73.6
MsaG013212 AT5G14750.4 46.552 58 31 0 87 144 1 58 8.20e-14 68.6
MsaG013212 AT5G14750.2 46.552 58 31 0 87 144 1 58 8.20e-14 68.6
MsaG013212 AT4G25560.2 63.043 46 17 0 99 144 2 47 8.75e-14 70.1
MsaG013212 AT3G46130.2 55.357 56 24 1 99 153 1 56 3.70e-13 67.8
MsaG013212 AT5G59780.1 58.333 48 20 0 99 146 1 48 6.26e-13 66.6

Find 91 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTTGATACTGATTAAA+TGG 0.178035 3:-45138567 None:intergenic
CGTTTGGATCTTGTCTCTTC+AGG 0.208350 3:-45138330 None:intergenic
ACTTTAAGATGGGAAATAAA+TGG 0.224965 3:+45137683 MsaT013212.1:CDS
ATAATGAGATAAAGAACTTT+TGG 0.307361 3:+45138262 MsaT013212.1:CDS
TGTACTAACGTCCGCTTCAT+TGG 0.316028 3:-45138793 None:intergenic
GAGCAAGTCCTGTATACTTT+TGG 0.318083 3:-45137558 None:intergenic
AATTATTGCATGTTGAATCT+TGG 0.349512 3:-45138467 None:intergenic
ATTGTTGAGTCGGTAAATAT+TGG 0.370138 3:-45138653 None:intergenic
TTCTGTTTCATCACTCTGGC+TGG 0.377360 3:-45138400 None:intergenic
AAAAGCACGGAGAGGGAAAT+TGG 0.378253 3:+45137527 MsaT013212.1:CDS
TTCTCAGATCTGGTCTCAAA+TGG 0.391193 3:-45137615 None:intergenic
ATTCGCATTCAATGGTCGTT+TGG 0.391492 3:-45138346 None:intergenic
AAGCACTGATCAAATGTTGC+TGG 0.403497 3:-45138519 None:intergenic
TCAAGGATATAATAACCTTC+TGG 0.408307 3:+45138581 MsaT013212.1:CDS
CTTTAAGATGGGAAATAAAT+GGG 0.426188 3:+45137684 MsaT013212.1:CDS
CCTGGAGTTGCACTTTAAGA+TGG 0.429054 3:+45137672 MsaT013212.1:CDS
ATTGCACCCTTTCTCAGATC+TGG 0.432449 3:-45137625 None:intergenic
GTTTGGATCTTGTCTCTTCA+GGG 0.433628 3:-45138329 None:intergenic
CCACTCATTTGAAACCCCTT+AGG 0.435707 3:+45138911 MsaT013212.1:CDS
GTACTAACGTCCGCTTCATT+GGG 0.439957 3:-45138792 None:intergenic
TACCGACTCAACAATATAGC+TGG 0.440940 3:+45138661 MsaT013212.1:CDS
ATGGGCTCAAATTGCTGCAC+TGG 0.463822 3:+45137702 MsaT013212.1:CDS
TAAAGTGCAACTCCAGGATT+CGG 0.469027 3:-45137666 None:intergenic
CTTGTCTCTTCAGGGTAGAC+TGG 0.469473 3:-45138321 None:intergenic
TGAAGAAGAACGCCGAATCC+TGG 0.469699 3:+45137654 MsaT013212.1:CDS
TTGAAGCGTGATCGATCGTC+AGG 0.475508 3:-45138827 None:intergenic
TAATCTTTGAATTCCACGTC+AGG 0.479263 3:-45138435 None:intergenic
AATGGAGGAGACCACATGAT+AGG 0.479874 3:-45138549 None:intergenic
ATGAACATGTGGTCAATTGA+TGG 0.488357 3:+45138885 MsaT013212.1:CDS
GTCGGTAAATATTGGAGTGA+AGG 0.489226 3:-45138645 None:intergenic
ATACAGGACTTGCTCGTTGT+GGG 0.490375 3:+45137566 MsaT013212.1:CDS
CCTAAGGGGTTTCAAATGAG+TGG 0.492160 3:-45138911 None:intergenic
TGGAGTGAAGGGAGCTCAGA+AGG 0.499704 3:-45138633 None:intergenic
TATTGCATGTTGAATCTTGG+CGG 0.500242 3:-45138464 None:intergenic
CCATCTTAAAGTGCAACTCC+AGG 0.502442 3:-45137672 None:intergenic
CCTCCATTTAATCAGTATCA+AGG 0.502555 3:+45138564 MsaT013212.1:CDS
TCAACATGCAATAATTTGTA+CGG 0.506808 3:+45138474 MsaT013212.1:CDS
ACTGACTGGTAAGGCTCAAA+CGG 0.514107 3:-45138714 None:intergenic
CAAGGAGATAACACTGGAAG+AGG 0.514470 3:+45137436 MsaT013212.1:CDS
ATCTCATTATCTGTACGTCC+AGG 0.519210 3:-45138249 None:intergenic
AGCGGACGTTAGTACACAAT+GGG 0.522305 3:+45138800 MsaT013212.1:CDS
CTGGAGTTGCACTTTAAGAT+GGG 0.525909 3:+45137673 MsaT013212.1:CDS
GCGGGGATGATGATCGCAAA+AGG 0.526243 3:+45137371 MsaT013212.1:CDS
ACCGACTCAACAATATAGCT+GGG 0.526428 3:+45138662 MsaT013212.1:CDS
ACTTGCAATGAATCAAGTAA+AGG 0.526899 3:-45138750 None:intergenic
AACACTGGAAGAGGAGGCGA+AGG 0.529795 3:+45137445 MsaT013212.1:CDS
TGAGTAGTAGCGCTTCAAGC+GGG 0.531285 3:+45137353 MsaT013212.1:CDS
AGGTCAATGGACGTCGGCAG+AGG 0.533018 3:+45137480 MsaT013212.1:CDS
GTAGTCTAAAGAAAGGTCAA+TGG 0.541083 3:+45137467 MsaT013212.1:CDS
AGTGCAGTCCAAAAGTATAC+AGG 0.543711 3:+45137550 MsaT013212.1:CDS
CTAAGGGGTTTCAAATGAGT+GGG 0.547400 3:-45138910 None:intergenic
TCAGCTGAAGAAGGTGATCA+AGG 0.548656 3:+45137418 MsaT013212.1:CDS
AACTACAGCGCCCAATGAAG+CGG 0.557737 3:+45138782 MsaT013212.1:CDS
GGAAAAGCTGTCGTCTACGA+TGG 0.558748 3:+45137587 MsaT013212.1:CDS
GGCTTCATTTGTGAATGTGT+CGG 0.559589 3:-45138379 None:intergenic
TATACAGGACTTGCTCGTTG+TGG 0.562241 3:+45137565 MsaT013212.1:CDS
TCGGTAAATATTGGAGTGAA+GGG 0.563642 3:-45138644 None:intergenic
GAAGTTAGAACTGACTGGTA+AGG 0.564623 3:-45138723 None:intergenic
GTGGAGAAGTTAGAACTGAC+TGG 0.566013 3:-45138728 None:intergenic
TGGTAAGGCTCAAACGGAGG+AGG 0.566295 3:-45138708 None:intergenic
GGAGATAACACTGGAAGAGG+AGG 0.566578 3:+45137439 MsaT013212.1:CDS
TTTGAGACCAGATCTGAGAA+AGG 0.567901 3:+45137618 MsaT013212.1:CDS
GGCGAAGGTAGTCTAAAGAA+AGG 0.568294 3:+45137460 MsaT013212.1:CDS
TGCAATGAATCAAGTAAAGG+TGG 0.569110 3:-45138747 None:intergenic
TTGAGACCAGATCTGAGAAA+GGG 0.574614 3:+45137619 MsaT013212.1:CDS
TCATCATTATCAGCTGAAGA+AGG 0.578816 3:+45137409 MsaT013212.1:CDS
CCCCAGCTATATTGTTGAGT+CGG 0.585578 3:-45138663 None:intergenic
AGCACTGATCAAATGTTGCT+GGG 0.586967 3:-45138518 None:intergenic
CATATGTTGTGTGTTATAGT+CGG 0.595758 3:-45138859 None:intergenic
GAAAAGCTGTCGTCTACGAT+GGG 0.599406 3:+45137588 MsaT013212.1:CDS
AACATATGAACATGAACATG+TGG 0.606750 3:+45138874 MsaT013212.1:CDS
TGGCATGAATACCGACCAGA+AGG 0.607988 3:-45138596 None:intergenic
GACTGGTAAGGCTCAAACGG+AGG 0.611230 3:-45138711 None:intergenic
AGAAGGAGAAATATTTGATG+TGG 0.615770 3:-45138616 None:intergenic
TGAACATGTGGTCAATTGAT+GGG 0.617705 3:+45138886 MsaT013212.1:CDS
AAATATGAGTATACCTGACG+TGG 0.619883 3:+45138422 MsaT013212.1:CDS
GAGTAGTAGCGCTTCAAGCG+GGG 0.620246 3:+45137354 MsaT013212.1:CDS
GGTGATCAAGGAGATAACAC+TGG 0.624615 3:+45137430 MsaT013212.1:CDS
GCTTTAAATATCCTATCATG+TGG 0.628017 3:+45138538 MsaT013212.1:CDS
TCTTCAGCTGATAATGATGA+CGG 0.637908 3:-45137406 None:intergenic
AGCGTGATCGATCGTCAGGT+CGG 0.639632 3:-45138823 None:intergenic
GGATATAATAACCTTCTGGT+CGG 0.644441 3:+45138585 MsaT013212.1:CDS
AAGCGGACGTTAGTACACAA+TGG 0.647493 3:+45138799 MsaT013212.1:CDS
CCTTGATACTGATTAAATGG+AGG 0.659431 3:-45138564 None:intergenic
ATGAGTAGTAGCGCTTCAAG+CGG 0.659631 3:+45137352 MsaT013212.1:CDS
GGAGGAGGCTGAATCAACGC+AGG 0.679803 3:-45138693 None:intergenic
AATGACATGCTAAACCTAAG+GGG 0.680724 3:-45138925 None:intergenic
AAAGAAAGGTCAATGGACGT+CGG 0.691272 3:+45137474 MsaT013212.1:CDS
TAAGGGGTTTCAAATGAGTG+GGG 0.702140 3:-45138909 None:intergenic
CCGACTCAACAATATAGCTG+GGG 0.703948 3:+45138663 MsaT013212.1:CDS
GATCGCAAAAGGCTAAAGCG+CGG 0.744667 3:+45137382 MsaT013212.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 45137352 45138932 45137352 ID=MsaG013212
Chr3 mRNA 45137352 45138932 45137352 ID=MsaT013212.1;Parent=MsaG013212
Chr3 exon 45137352 45137723 45137352 ID=MsaT013212.1.exon1;Parent=MsaT013212.1
Chr3 CDS 45137352 45137723 45137352 ID=cds.MsaT013212.1;Parent=MsaT013212.1
Chr3 exon 45138246 45138932 45138246 ID=MsaT013212.1.exon2;Parent=MsaT013212.1
Chr3 CDS 45138246 45138932 45138246 ID=cds.MsaT013212.1;Parent=MsaT013212.1
Gene Sequence

>MsaT013212.1

ATGAGTAGTAGCGCTTCAAGCGGGGATGATGATCGCAAAAGGCTAAAGCGCGGTCCGTCATCATTATCAGCTGAAGAAGGTGATCAAGGAGATAACACTGGAAGAGGAGGCGAAGGTAGTCTAAAGAAAGGTCAATGGACGTCGGCAGAGGATGATATTTTGATAGCTCATGTTAAAAAGCACGGAGAGGGAAATTGGAGTGCAGTCCAAAAGTATACAGGACTTGCTCGTTGTGGGAAAAGCTGTCGTCTACGATGGGCAAACCATTTGAGACCAGATCTGAGAAAGGGTGCAATTACTGCTGAAGAAGAACGCCGAATCCTGGAGTTGCACTTTAAGATGGGAAATAAATGGGCTCAAATTGCTGCACTGTTGCCTGGACGTACAGATAATGAGATAAAGAACTTTTGGAACACAAGATATAAGAAACGAACACGAGCTAACTTACCAGTCTACCCTGAAGAGACAAGATCCAAACGACCATTGAATGCGAATCAAGAAAATGCCGACACATTCACAAATGAAGCCAGCCAGAGTGATGAAACAGAAAATATGAGTATACCTGACGTGGAATTCAAAGATTACAAACTCCGCCAAGATTCAACATGCAATAATTTGTACGGTTGTAGCAGTAGTGCTGCTGTCCCAGCAACATTTGATCAGTGCTTTAAATATCCTATCATGTGGTCTCCTCCATTTAATCAGTATCAAGGATATAATAACCTTCTGGTCGGTATTCATGCCACATCAAATATTTCTCCTTCTGAGCTCCCTTCACTCCAATATTTACCGACTCAACAATATAGCTGGGGCTGCATGCCTGCGTTGATTCAGCCTCCTCCGTTTGAGCCTTACCAGTCAGTTCTAACTTCTCCACCTTTACTTGATTCATTGCAAGTGAAAACTGAAACTACAGCGCCCAATGAAGCGGACGTTAGTACACAATGGGCCGACCTGACGATCGATCACGCTTCAATTTCGCTATCCGACTATAACACACAACATATGAACATGAACATGTGGTCAATTGATGGGCCCCACTCATTTGAAACCCCTTAG
Protein sequence

>MsaT013212.1

MSSSASSGDDDRKRLKRGPSSLSAEEGDQGDNTGRGGEGSLKKGQWTSAEDDILIAHVKKHGEGNWSAVQKYTGLARCGKSCRLRWANHLRPDLRKGAITAEEERRILELHFKMGNKWAQIAALLPGRTDNEIKNFWNTRYKKRTRANLPVYPEETRSKRPLNANQENADTFTNEASQSDETENMSIPDVEFKDYKLRQDSTCNNLYGCSSSAAVPATFDQCFKYPIMWSPPFNQYQGYNNLLVGIHATSNISPSELPSLQYLPTQQYSWGCMPALIQPPPFEPYQSVLTSPPLLDSLQVKTETTAPNEADVSTQWADLTIDHASISLSDYNTQHMNMNMWSIDGPHSFETP*