AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG014048


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG014048 MtrunA17_Chr3g0101131 97.983 595 12 0 1 595 1 595 0.0 1208
MsaG014048 MtrunA17_Chr5g0445311 66.782 578 139 8 24 595 15 545 0.0 748
MsaG014048 MtrunA17_Chr3g0079691 43.381 491 194 15 60 492 109 573 8.60e-102 323
MsaG014048 MtrunA17_Chr7g0218081 47.352 321 143 5 206 508 191 503 7.04e-88 282
MsaG014048 MtrunA17_Chr5g0432161 42.824 425 205 10 64 477 86 483 1.06e-87 283
MsaG014048 MtrunA17_Chr5g0432161 52.113 71 20 2 243 299 421 491 2.00e-13 73.2
MsaG014048 MtrunA17_Chr3g0106491 43.294 425 182 12 58 477 57 427 1.58e-85 275
MsaG014048 MtrunA17_Chr7g0249311 52.055 292 89 8 236 481 172 458 4.71e-81 268
MsaG014048 MtrunA17_Chr5g0418191 52.490 261 109 4 235 489 143 394 5.46e-80 258
MsaG014048 MtrunA17_Chr5g0418191 50.000 88 39 3 397 482 133 217 1.39e-16 82.4
MsaG014048 MtrunA17_Chr7g0243891 40.899 467 186 14 40 477 31 436 1.98e-77 255
MsaG014048 MtrunA17_Chr4g0042831 50.000 258 82 6 236 489 138 352 7.72e-75 243
MsaG014048 MtrunA17_Chr4g0042831 43.678 87 49 0 415 501 145 231 2.00e-13 72.4
MsaG014048 MtrunA17_Chr4g0004911 53.138 239 90 5 240 477 181 398 3.78e-73 242
MsaG014048 MtrunA17_Chr7g0249301 45.485 299 105 6 237 477 56 354 2.31e-70 231
MsaG014048 MtrunA17_Chr7g0249301 48.235 85 39 2 414 494 61 144 6.11e-15 77.0
MsaG014048 MtrunA17_Chr7g0263531 50.813 246 103 6 238 474 184 420 7.46e-70 232
MsaG014048 MtrunA17_Chr5g0447701 42.857 252 114 6 235 477 84 314 4.32e-54 189
MsaG014048 MtrunA17_Chr5g0447701 45.946 74 39 1 413 486 90 162 1.40e-12 69.7
MsaG014048 MtrunA17_Chr4g0074001 42.798 243 130 5 242 478 185 424 4.05e-49 178
MsaG014048 MtrunA17_Chr5g0447711 30.830 253 140 3 235 482 75 297 1.43e-34 133
MsaG014048 MtrunA17_Chr1g0188941 70.130 77 23 0 399 475 35 111 6.19e-34 125
MsaG014048 MtrunA17_Chr1g0188941 51.613 62 29 1 243 303 51 112 3.22e-16 75.1
MsaG014048 MtrunA17_Chr8g0335811 62.821 78 29 0 394 471 133 210 3.03e-29 115
MsaG014048 MtrunA17_Chr8g0335811 59.649 57 22 1 243 298 154 210 2.29e-15 75.9
MsaG014048 MtrunA17_Chr3g0129361 62.162 74 28 0 398 471 127 200 8.64e-29 114
MsaG014048 MtrunA17_Chr3g0129361 56.140 57 24 1 243 298 144 200 3.24e-14 72.4
MsaG014048 MtrunA17_Chr4g0051881 61.364 88 33 1 401 487 164 251 2.28e-28 116
MsaG014048 MtrunA17_Chr4g0051881 48.101 79 35 2 243 315 178 256 5.38e-15 76.6
MsaG014048 MtrunA17_Chr8g0383351 62.667 75 27 1 398 471 142 216 6.85e-28 112
MsaG014048 MtrunA17_Chr8g0383351 56.140 57 24 1 243 298 160 216 2.14e-14 73.2
MsaG014048 MtrunA17_Chr7g0270191 58.621 87 36 0 399 485 129 215 7.74e-28 113
MsaG014048 MtrunA17_Chr7g0270191 57.812 64 26 1 243 305 145 208 1.75e-15 77.4
MsaG014048 MtrunA17_Chr1g0194481 61.728 81 31 0 395 475 138 218 1.22e-27 114
MsaG014048 MtrunA17_Chr1g0194481 56.522 69 28 2 243 309 158 226 1.95e-16 80.9
MsaG014048 MtrunA17_Chr5g0418781 64.474 76 27 0 396 471 105 180 2.97e-27 111
MsaG014048 MtrunA17_Chr5g0418781 59.649 57 22 1 243 298 124 180 3.59e-14 73.2
MsaG014048 MtrunA17_Chr2g0294231 57.447 94 39 1 399 491 187 280 4.13e-27 113
MsaG014048 MtrunA17_Chr2g0294231 59.375 64 25 1 243 305 203 266 4.04e-16 80.5
MsaG014048 MtrunA17_Chr1g0150801 59.211 76 30 1 396 471 84 158 2.15e-26 105
MsaG014048 MtrunA17_Chr1g0150801 36.634 101 59 3 200 299 63 159 4.56e-12 64.7
MsaG014048 MtrunA17_Chr5g0443131 59.259 81 32 1 401 480 143 223 7.05e-26 108
MsaG014048 MtrunA17_Chr5g0443131 53.125 64 29 1 243 305 157 220 3.94e-13 70.5
MsaG014048 MtrunA17_Chr2g0288871 31.673 281 139 10 220 474 112 365 3.77e-25 109
MsaG014048 MtrunA17_Chr8g0383251 53.165 79 37 0 402 480 95 173 5.42e-25 102
MsaG014048 MtrunA17_Chr8g0386241 56.410 78 34 0 396 473 84 161 6.09e-25 102
MsaG014048 MtrunA17_Chr8g0386241 53.030 66 30 1 243 307 103 168 5.09e-17 79.3
MsaG014048 MtrunA17_Chr7g0224801 59.459 74 30 0 406 479 84 157 6.15e-25 101
MsaG014048 MtrunA17_Chr7g0224801 51.515 66 31 1 243 307 93 158 4.02e-16 76.6
MsaG014048 MtrunA17_Chr7g0270831 53.012 83 38 1 395 476 196 278 3.13e-24 105
MsaG014048 MtrunA17_Chr3g0099641 52.564 78 36 1 398 474 234 311 2.69e-23 103
MsaG014048 MtrunA17_Chr4g0075201 55.000 80 35 1 398 476 250 329 2.71e-23 103
MsaG014048 MtrunA17_Chr4g0075201 49.180 61 29 2 243 301 267 327 2.75e-11 66.2
MsaG014048 MtrunA17_Chr2g0322391 55.000 80 35 1 398 476 332 411 3.37e-23 103
MsaG014048 MtrunA17_Chr4g0025061 42.202 109 59 2 388 495 333 438 8.51e-23 102
MsaG014048 MtrunA17_Chr4g0068541 48.113 106 51 2 399 502 192 295 1.22e-22 100
MsaG014048 MtrunA17_Chr4g0068541 56.338 71 30 1 243 312 208 278 2.46e-15 78.6
MsaG014048 MtrunA17_Chr3g0129321 54.054 74 34 0 401 474 104 177 1.48e-22 95.9
MsaG014048 MtrunA17_Chr3g0129321 50.000 60 29 1 243 301 118 177 7.82e-12 65.1
MsaG014048 MtrunA17_Chr4g0060271 46.296 108 53 2 372 474 208 315 1.59e-22 102
MsaG014048 MtrunA17_Chr4g0060271 49.180 61 29 2 243 301 255 315 6.73e-11 65.1
MsaG014048 MtrunA17_Chr5g0401821 48.485 99 42 2 382 479 174 264 1.61e-22 97.8
MsaG014048 MtrunA17_Chr4g0051181 55.000 80 35 1 397 475 225 304 1.73e-22 101
MsaG014048 MtrunA17_Chr4g0051181 50.820 61 28 2 243 301 243 303 1.43e-11 67.0
MsaG014048 MtrunA17_Chr6g0485431 42.400 125 66 3 354 474 92 214 2.95e-22 99.0
MsaG014048 MtrunA17_Chr6g0485431 28.249 177 104 8 142 306 54 219 7.86e-11 63.9
MsaG014048 MtrunA17_Chr7g0248721 57.692 78 32 1 394 471 120 196 4.40e-22 95.1
MsaG014048 MtrunA17_Chr7g0248721 53.125 64 28 2 237 299 135 197 1.26e-14 73.6
MsaG014048 MtrunA17_Chr5g0432071 60.938 64 25 0 243 306 104 167 1.40e-21 93.6
MsaG014048 MtrunA17_Chr5g0432071 53.226 62 28 1 415 476 104 164 3.21e-15 75.1
MsaG014048 MtrunA17_Chr7g0216891 38.462 130 61 3 350 471 158 276 3.82e-21 97.4
MsaG014048 MtrunA17_Chr7g0216891 50.847 59 27 2 243 299 219 277 8.50e-11 64.7
MsaG014048 MtrunA17_Chr1g0189391 56.338 71 30 1 402 471 84 154 4.63e-21 94.7
MsaG014048 MtrunA17_Chr4g0053281 53.165 79 36 1 399 476 250 328 1.16e-20 93.6
MsaG014048 MtrunA17_Chr1g0147881 49.474 95 39 3 383 476 238 324 1.34e-20 93.6
MsaG014048 MtrunA17_Chr2g0302391 50.633 79 38 1 399 476 195 273 2.19e-20 94.0
MsaG014048 MtrunA17_Chr3g0136961 61.017 59 22 1 414 471 137 195 2.83e-20 91.7
MsaG014048 MtrunA17_Chr3g0136961 38.889 90 47 3 224 311 125 208 1.76e-12 68.6
MsaG014048 MtrunA17_Chr4g0025051 37.903 124 71 3 373 495 295 413 2.90e-20 94.7
MsaG014048 MtrunA17_Chr7g0238921 63.158 57 21 0 415 471 124 180 3.75e-20 91.7
MsaG014048 MtrunA17_Chr7g0238921 56.140 57 24 1 243 298 124 180 9.01e-13 69.7
MsaG014048 MtrunA17_Chr2g0333851 57.812 64 26 1 413 475 167 230 2.30e-19 89.4
MsaG014048 MtrunA17_Chr2g0333851 48.333 60 29 2 244 301 170 229 3.71e-11 64.7
MsaG014048 MtrunA17_Chr4g0071521 49.451 91 37 3 382 471 220 302 3.46e-19 89.0
MsaG014048 MtrunA17_Chr1g0150281 57.895 57 23 1 416 471 141 197 5.87e-19 87.4
MsaG014048 MtrunA17_Chr1g0184691 59.091 66 25 2 412 475 290 355 1.91e-18 87.4
MsaG014048 MtrunA17_Chr4g0001361 57.143 63 26 1 413 474 160 222 3.14e-18 85.9
MsaG014048 MtrunA17_Chr4g0001361 50.000 60 28 2 244 301 163 222 8.81e-12 66.6
MsaG014048 MtrunA17_Chr1g0150271 49.206 63 31 1 413 474 99 161 1.29e-17 83.2
MsaG014048 MtrunA17_Chr7g0228941 52.459 61 28 1 412 471 49 109 9.68e-17 77.0
MsaG014048 MtrunA17_Chr2g0289181 46.753 77 40 1 404 479 3 79 9.91e-17 79.7
MsaG014048 MtrunA17_Chr8g0379461 50.794 63 30 1 416 477 77 139 1.43e-16 79.7
MsaG014048 MtrunA17_Chr1g0188961 68.000 50 16 0 435 484 3 52 1.47e-16 74.3
MsaG014048 MtrunA17_Chr2g0284321 41.111 90 51 2 416 504 36 124 2.26e-16 78.6
MsaG014048 MtrunA17_Chr3g0139021 48.000 75 38 1 399 472 298 372 3.93e-16 80.9
MsaG014048 MtrunA17_Chr8g0387501 50.769 65 31 1 414 477 128 192 5.52e-16 78.6
MsaG014048 MtrunA17_Chr8g0387501 44.444 72 36 3 237 306 123 192 2.41e-11 64.7
MsaG014048 MtrunA17_Chr7g0270051 48.571 70 35 1 416 484 54 123 6.00e-16 78.2
MsaG014048 MtrunA17_Chr7g0270051 50.000 60 28 2 244 301 54 113 2.80e-11 64.3
MsaG014048 MtrunA17_Chr7g0248691 42.157 102 45 3 379 479 131 219 9.31e-16 79.0
MsaG014048 MtrunA17_Chr8g0348311 40.594 101 46 3 380 479 133 220 1.11e-15 78.6
MsaG014048 MtrunA17_Chr2g0319961 49.206 63 31 1 416 477 81 143 1.54e-15 77.0
MsaG014048 MtrunA17_Chr2g0293481 42.045 88 41 2 416 502 268 346 2.26e-15 79.0
MsaG014048 MtrunA17_Chr4g0024391 33.621 116 71 3 381 495 197 307 6.24e-15 77.8
MsaG014048 MtrunA17_Chr6g0468181 64.706 51 18 0 260 310 19 69 7.70e-15 71.2
MsaG014048 MtrunA17_Chr4g0009881 47.143 70 36 1 233 302 7 75 1.09e-14 70.5
MsaG014048 MtrunA17_Chr1g0202461 46.269 67 35 1 412 477 258 324 7.74e-14 73.6
MsaG014048 MtrunA17_Chr1g0202461 38.961 77 45 2 236 310 254 330 6.75e-11 64.3
MsaG014048 MtrunA17_Chr3g0126391 50.847 59 26 1 414 469 132 190 1.35e-12 69.3
MsaG014048 MtrunA17_Chr3g0126391 49.231 65 29 2 236 296 126 190 1.12e-11 66.6
MsaG014048 MtrunA17_Chr5g0419241 54.348 46 21 0 398 443 60 105 1.82e-12 63.9
MsaG014048 MtrunA17_Chr8g0387981 40.157 127 60 7 347 469 75 189 3.97e-12 68.2
MsaG014048 MtrunA17_Chr8g0387981 32.877 146 86 5 156 296 51 189 2.64e-11 65.5
MsaG014048 MtrunA17_Chr2g0315361 32.812 128 77 3 345 469 84 205 1.50e-11 65.9
MsaG014048 MtrunA17_Chr8g0347251 28.889 180 99 7 237 394 130 302 1.98e-11 65.9
MsaG014048 MtrunA17_Chr7g0275531 47.458 59 28 1 414 469 117 175 2.68e-11 65.1
MsaG014048 MtrunA17_Chr7g0275531 45.714 70 32 3 243 306 118 187 4.41e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG014048 AT4G26640.2 57.219 561 190 18 46 595 36 557 0.0 543
MsaG014048 AT4G26640.7 56.835 556 190 18 51 595 1 517 0.0 532
MsaG014048 AT4G26640.1 55.106 519 183 18 88 595 6 485 3.75e-162 472
MsaG014048 AT4G26640.5 61.735 392 121 12 214 595 9 381 2.05e-152 443
MsaG014048 AT4G26640.6 61.735 392 121 12 214 595 9 381 2.05e-152 443
MsaG014048 AT4G26640.4 61.735 392 121 12 214 595 9 381 2.05e-152 443
MsaG014048 AT4G26640.3 61.735 392 121 12 214 595 9 381 2.05e-152 443
MsaG014048 AT5G56270.1 43.008 472 185 15 60 477 108 549 7.51e-91 295
MsaG014048 AT2G03340.1 40.045 442 193 14 47 483 109 483 1.38e-83 271
MsaG014048 AT2G38470.1 53.558 267 110 5 223 477 160 424 2.12e-78 257
MsaG014048 AT1G13960.2 48.299 294 132 6 192 474 31 315 2.18e-78 252
MsaG014048 AT1G13960.1 48.299 294 132 6 192 474 184 468 3.16e-77 254
MsaG014048 AT4G26440.1 44.382 356 150 10 170 488 101 445 4.80e-75 250
MsaG014048 AT3G01080.2 52.434 267 80 5 222 474 170 403 8.53e-74 243
MsaG014048 AT3G01080.1 52.434 267 80 5 222 474 132 365 1.01e-73 242
MsaG014048 AT5G07100.2 50.617 243 63 4 236 477 17 203 1.26e-71 229
MsaG014048 AT5G07100.2 39.785 93 45 1 403 484 1 93 3.25e-14 72.4
MsaG014048 AT5G07100.2 54.688 64 28 1 243 305 141 204 1.16e-13 70.9
MsaG014048 AT5G07100.4 50.617 243 63 4 236 477 17 203 1.26e-71 229
MsaG014048 AT5G07100.4 39.785 93 45 1 403 484 1 93 3.25e-14 72.4
MsaG014048 AT5G07100.4 54.688 64 28 1 243 305 141 204 1.16e-13 70.9
MsaG014048 AT5G07100.5 50.617 243 63 4 236 477 17 203 1.26e-71 229
MsaG014048 AT5G07100.5 39.785 93 45 1 403 484 1 93 3.25e-14 72.4
MsaG014048 AT5G07100.5 54.688 64 28 1 243 305 141 204 1.16e-13 70.9
MsaG014048 AT5G07100.3 50.617 243 63 4 236 477 17 203 1.26e-71 229
MsaG014048 AT5G07100.3 39.785 93 45 1 403 484 1 93 3.25e-14 72.4
MsaG014048 AT5G07100.3 54.688 64 28 1 243 305 141 204 1.16e-13 70.9
MsaG014048 AT5G07100.1 50.617 243 63 4 236 477 110 296 7.19e-71 231
MsaG014048 AT5G07100.1 28.571 273 160 6 64 305 29 297 1.75e-23 101
MsaG014048 AT5G07100.1 40.367 109 49 3 390 485 84 189 1.03e-15 79.0
MsaG014048 AT2G04880.2 40.062 322 168 6 175 482 40 350 4.43e-67 226
MsaG014048 AT2G04880.1 40.179 336 172 7 175 482 40 374 1.08e-65 223
MsaG014048 AT2G04880.1 54.167 72 31 2 243 313 307 377 5.65e-17 84.3
MsaG014048 AT2G30250.1 48.980 245 107 4 240 480 163 393 9.61e-65 218
MsaG014048 AT2G30250.1 39.216 102 51 2 415 506 166 266 9.70e-12 67.8
MsaG014048 AT2G37260.2 46.094 256 110 5 238 473 78 325 3.01e-56 193
MsaG014048 AT2G37260.2 55.738 61 26 1 416 476 84 143 1.21e-14 76.3
MsaG014048 AT2G37260.3 47.674 258 103 8 238 473 80 327 3.11e-56 193
MsaG014048 AT2G37260.3 55.738 61 26 1 416 476 86 145 1.15e-14 76.3
MsaG014048 AT2G37260.1 47.674 258 103 8 238 473 160 407 1.29e-55 194
MsaG014048 AT2G37260.1 55.738 61 26 1 416 476 166 225 1.47e-14 76.6
MsaG014048 AT4G30935.1 40.590 271 135 8 244 505 169 422 6.29e-45 166
MsaG014048 AT4G12020.3 43.602 211 94 6 238 435 463 661 8.69e-39 154
MsaG014048 AT4G12020.3 31.061 132 73 3 414 529 467 596 1.74e-12 71.2
MsaG014048 AT4G12020.1 43.602 211 94 6 238 435 463 661 9.04e-39 154
MsaG014048 AT4G12020.1 31.061 132 73 3 414 529 467 596 1.80e-12 71.2
MsaG014048 AT4G12020.9 43.602 211 94 6 238 435 463 661 9.04e-39 154
MsaG014048 AT4G12020.9 31.061 132 73 3 414 529 467 596 1.80e-12 71.2
MsaG014048 AT4G12020.6 43.602 211 94 6 238 435 463 661 9.07e-39 153
MsaG014048 AT4G12020.6 31.061 132 73 3 414 529 467 596 1.64e-12 71.2
MsaG014048 AT4G12020.8 43.602 211 94 6 238 435 463 661 9.07e-39 153
MsaG014048 AT4G12020.8 31.061 132 73 3 414 529 467 596 1.64e-12 71.2
MsaG014048 AT4G12020.7 43.602 211 94 6 238 435 463 661 9.88e-39 153
MsaG014048 AT4G12020.7 31.061 132 73 3 414 529 467 596 1.84e-12 71.2
MsaG014048 AT4G12020.2 43.602 211 94 6 238 435 463 661 1.01e-38 153
MsaG014048 AT4G12020.2 31.061 132 73 3 414 529 467 596 1.89e-12 71.2
MsaG014048 AT4G12020.10 43.602 211 94 6 238 435 463 661 1.01e-38 153
MsaG014048 AT4G12020.10 31.061 132 73 3 414 529 467 596 1.91e-12 71.2
MsaG014048 AT4G12020.4 43.602 211 94 6 238 435 463 661 1.05e-38 153
MsaG014048 AT4G12020.4 33.645 107 54 2 414 504 467 572 1.99e-12 71.2
MsaG014048 AT4G12020.11 43.602 211 94 6 238 435 463 661 1.20e-38 153
MsaG014048 AT4G12020.11 31.061 132 73 3 414 529 467 596 1.90e-12 71.2
MsaG014048 AT4G12020.5 43.602 211 94 6 238 435 396 594 1.41e-38 153
MsaG014048 AT4G12020.5 33.645 107 54 2 414 504 400 505 2.23e-12 70.9
MsaG014048 AT4G18170.1 56.481 108 45 1 368 475 127 232 1.25e-30 122
MsaG014048 AT4G18170.1 55.000 60 26 1 243 301 172 231 4.28e-14 73.9
MsaG014048 AT3G01080.3 52.381 126 43 2 222 333 170 292 3.65e-30 121
MsaG014048 AT3G01080.3 55.556 63 27 1 415 477 205 266 4.82e-16 80.1
MsaG014048 AT2G44745.1 61.538 78 30 0 394 471 124 201 3.03e-29 115
MsaG014048 AT2G44745.1 59.649 57 22 1 243 298 145 201 1.65e-15 76.3
MsaG014048 AT4G39410.1 64.474 76 27 0 396 471 204 279 4.86e-29 117
MsaG014048 AT4G39410.1 54.386 57 25 1 243 298 223 279 1.64e-12 68.9
MsaG014048 AT1G29860.1 62.821 78 29 0 399 476 120 197 8.48e-28 113
MsaG014048 AT1G29860.1 54.688 64 28 1 243 305 136 199 1.81e-14 74.7
MsaG014048 AT1G69310.4 64.474 76 27 0 396 471 128 203 3.18e-27 112
MsaG014048 AT1G69310.4 57.895 57 23 1 243 298 147 203 1.18e-13 72.4
MsaG014048 AT1G69310.2 64.474 76 27 0 396 471 128 203 3.18e-27 112
MsaG014048 AT1G69310.2 57.895 57 23 1 243 298 147 203 1.18e-13 72.4
MsaG014048 AT1G69310.1 64.474 76 27 0 396 471 128 203 3.18e-27 112
MsaG014048 AT1G69310.1 57.895 57 23 1 243 298 147 203 1.18e-13 72.4
MsaG014048 AT5G26170.1 62.857 70 26 0 402 471 100 169 5.01e-27 108
MsaG014048 AT5G26170.1 49.123 57 28 1 243 298 113 169 1.33e-11 63.9
MsaG014048 AT5G46350.1 62.338 77 29 0 401 477 169 245 7.08e-27 112
MsaG014048 AT5G46350.1 51.429 70 31 2 243 309 183 252 4.51e-14 73.9
MsaG014048 AT2G47260.1 63.158 76 28 0 399 474 158 233 2.05e-26 110
MsaG014048 AT2G47260.1 43.478 92 51 1 223 313 154 245 1.47e-14 75.9
MsaG014048 AT5G13080.1 57.692 78 33 0 402 479 54 131 3.30e-26 104
MsaG014048 AT5G13080.1 50.000 66 32 1 243 307 67 132 1.33e-15 74.7
MsaG014048 AT3G01970.1 58.537 82 34 0 402 483 52 133 4.45e-26 104
MsaG014048 AT3G01970.1 53.030 66 30 1 243 307 65 130 1.91e-14 71.2
MsaG014048 AT5G49520.1 61.842 76 29 0 399 474 205 280 6.49e-26 110
MsaG014048 AT5G49520.1 48.101 79 40 1 228 305 206 284 1.37e-14 76.6
MsaG014048 AT1G55600.1 62.667 75 28 0 402 476 294 368 1.72e-25 110
MsaG014048 AT1G55600.1 55.000 60 26 1 243 301 307 366 3.20e-14 75.9
MsaG014048 AT5G41570.1 60.563 71 28 0 401 471 84 154 9.60e-25 102
MsaG014048 AT5G41570.1 51.613 62 29 1 239 299 94 155 8.87e-14 70.5
MsaG014048 AT4G04450.2 52.632 95 41 2 398 491 181 272 9.69e-25 107
MsaG014048 AT1G64000.1 60.000 70 28 0 402 471 101 170 2.51e-24 101
MsaG014048 AT1G64000.1 51.613 62 29 1 239 299 110 171 4.11e-14 71.6
MsaG014048 AT5G64810.1 56.338 71 31 0 402 472 97 167 4.38e-24 100
MsaG014048 AT4G04450.1 52.632 95 41 2 398 491 275 366 4.69e-24 106
MsaG014048 AT2G46130.1 56.579 76 33 0 396 471 11 86 8.22e-24 97.1
MsaG014048 AT2G46130.1 56.897 58 24 1 243 299 30 87 1.46e-15 73.6
MsaG014048 AT4G22070.4 51.724 87 41 1 389 474 271 357 3.44e-23 103
MsaG014048 AT4G22070.3 51.724 87 41 1 389 474 271 357 3.44e-23 103
MsaG014048 AT4G22070.2 51.724 87 41 1 389 474 271 357 3.44e-23 103
MsaG014048 AT4G22070.1 51.724 87 41 1 389 474 271 357 3.44e-23 103
MsaG014048 AT1G62300.1 56.410 78 33 1 398 474 295 372 3.80e-23 103
MsaG014048 AT1G62300.1 40.476 84 45 3 223 301 289 372 7.73e-11 65.5
MsaG014048 AT1G69310.3 60.526 76 26 1 396 471 128 199 1.52e-22 98.6
MsaG014048 AT1G68150.1 55.128 78 34 1 399 475 219 296 3.74e-22 99.0
MsaG014048 AT1G68150.1 50.820 61 28 2 243 301 235 295 4.47e-11 65.5
MsaG014048 AT3G62340.1 57.895 76 32 0 399 474 102 177 4.24e-22 97.1
MsaG014048 AT3G62340.1 56.667 60 25 1 243 301 118 177 1.06e-13 72.4
MsaG014048 AT4G01720.1 54.430 79 35 1 397 474 221 299 6.03e-22 99.8
MsaG014048 AT5G15130.2 51.282 78 37 1 398 474 168 245 1.26e-21 99.0
MsaG014048 AT5G15130.1 51.282 78 37 1 398 474 210 287 1.55e-21 99.0
MsaG014048 AT4G31800.2 38.281 128 62 4 414 537 110 224 2.38e-21 94.0
MsaG014048 AT1G18860.1 52.564 78 36 1 398 474 222 299 2.51e-21 98.2
MsaG014048 AT1G18860.1 50.820 61 28 2 243 301 239 299 9.80e-11 65.1
MsaG014048 AT4G31800.1 38.281 128 62 4 414 537 175 289 4.73e-21 94.7
MsaG014048 AT2G21900.1 37.302 126 67 3 354 476 54 170 7.96e-21 91.3
MsaG014048 AT2G21900.1 47.059 68 35 1 235 301 101 168 1.21e-13 70.5
MsaG014048 AT2G23320.1 48.387 93 39 2 382 473 215 299 8.18e-20 91.3
MsaG014048 AT4G31550.1 52.439 82 38 1 399 479 230 311 8.59e-20 91.3
MsaG014048 AT4G31550.2 52.439 82 38 1 399 479 229 310 8.96e-20 91.3
MsaG014048 AT4G23550.1 44.828 87 44 2 404 489 129 212 2.37e-19 89.7
MsaG014048 AT2G46130.2 52.632 76 32 1 396 471 11 82 3.17e-19 83.6
MsaG014048 AT2G46130.2 51.724 58 23 2 243 299 30 83 5.21e-11 60.1
MsaG014048 AT4G24240.1 49.462 93 38 3 382 473 256 340 3.30e-19 90.1
MsaG014048 AT1G80840.1 42.056 107 43 3 394 481 115 221 4.94e-19 88.6
MsaG014048 AT1G80840.1 48.333 60 29 2 244 301 147 206 3.48e-11 65.1
MsaG014048 AT5G43290.1 44.444 99 37 2 391 471 72 170 4.94e-19 87.8
MsaG014048 AT5G43290.1 48.684 76 38 1 224 298 95 170 1.03e-13 72.4
MsaG014048 AT2G25000.2 40.187 107 41 4 414 518 102 187 1.48e-18 85.5
MsaG014048 AT2G25000.4 40.187 107 41 4 414 518 102 187 1.48e-18 85.5
MsaG014048 AT5G28650.1 43.564 101 48 3 382 481 237 329 1.89e-18 87.4
MsaG014048 AT2G30590.1 51.899 79 34 2 394 471 295 370 1.90e-18 88.2
MsaG014048 AT2G24570.1 55.405 74 32 1 399 471 227 300 2.57e-18 86.7
MsaG014048 AT1G69810.2 45.263 95 48 3 398 490 128 220 3.47e-18 86.7
MsaG014048 AT2G25000.3 40.187 107 41 4 414 518 124 209 3.47e-18 85.1
MsaG014048 AT2G25000.1 40.187 107 41 4 414 518 145 230 3.99e-18 85.1
MsaG014048 AT1G69810.1 45.263 95 48 3 398 490 186 278 4.29e-18 87.0
MsaG014048 AT3G04670.1 43.564 101 48 3 382 481 237 329 4.72e-18 86.3
MsaG014048 AT4G01250.1 53.846 65 29 1 416 479 129 193 1.64e-16 80.9
MsaG014048 AT4G01250.1 32.203 118 72 3 212 327 103 214 4.18e-11 64.7
MsaG014048 AT1G29280.1 51.667 60 28 1 416 474 75 134 5.32e-16 78.6
MsaG014048 AT3G58710.1 48.485 66 33 1 416 480 72 137 1.76e-15 77.4
MsaG014048 AT3G58710.2 48.485 66 33 1 416 480 71 136 1.89e-15 77.4
MsaG014048 AT5G52830.1 45.833 72 38 1 408 478 158 229 2.45e-15 78.2
MsaG014048 AT2G34830.1 50.000 64 31 1 416 478 216 279 2.95e-15 78.6
MsaG014048 AT2G34830.2 50.000 64 31 1 416 478 225 288 2.98e-15 79.0
MsaG014048 AT1G30650.1 48.438 64 32 1 416 478 218 281 1.87e-14 76.3
MsaG014048 AT5G45050.4 50.000 64 31 1 416 478 1042 1105 6.64e-14 75.9
MsaG014048 AT5G45050.1 50.000 64 31 1 416 478 1181 1244 6.68e-14 75.9
MsaG014048 AT5G45050.2 50.000 64 31 1 416 478 1153 1216 6.82e-14 75.9
MsaG014048 AT5G24110.1 46.154 65 31 2 236 296 106 170 2.81e-12 68.6
MsaG014048 AT4G23810.1 51.724 58 24 2 243 296 158 215 4.33e-12 68.2
MsaG014048 AT4G11070.2 42.391 92 47 3 243 328 109 200 5.44e-12 67.4
MsaG014048 AT4G11070.1 42.391 92 47 3 243 328 141 232 7.24e-12 67.4
MsaG014048 AT2G46400.1 41.111 90 44 2 383 469 78 161 1.09e-11 66.6
MsaG014048 AT2G40740.1 31.933 119 71 3 188 296 112 230 1.73e-11 65.9
MsaG014048 AT2G40740.1 45.588 68 31 2 415 476 173 240 1.78e-11 65.9
MsaG014048 AT2G40740.3 45.588 68 31 2 415 476 182 249 2.21e-11 65.5
MsaG014048 AT2G40740.3 31.933 119 71 3 188 296 121 239 2.42e-11 65.5
MsaG014048 AT1G66560.1 48.276 58 27 1 415 469 103 160 4.18e-11 63.9

Find 172 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAAAGGCTTTAATAATTA+TGG 0.166867 3:+65940661 MsaT014048.1:intron
CGACGGCTTGGTTGAGGTTT+AGG 0.198085 3:-65940469 None:intergenic
CGGGAGATTGTCGCCGGAAT+TGG 0.216231 3:-65937570 None:intergenic
TATAAACTATCTCAGTAATT+TGG 0.216997 3:-65940429 None:intergenic
GGTTATCGCTGGCGTAAATA+TGG 0.217888 3:+65941009 MsaT014048.1:CDS
AATTACTGAGATAGTTTATA+AGG 0.218011 3:+65940432 MsaT014048.1:CDS
GGATACAATTGGCGAAAATA+TGG 0.222709 3:+65940307 MsaT014048.1:CDS
CATCAACCTCGTCATTATTC+TGG 0.257518 3:-65940780 None:intergenic
TATGTTGTTATTACAGCTTT+TGG 0.259367 3:-65943897 None:intergenic
TAGTATCACTTTCTTCTTGC+CGG 0.307326 3:-65944010 None:intergenic
TATGGGCAGAAGCTTGTTAA+AGG 0.320582 3:+65940325 MsaT014048.1:CDS
GAAGCTGACCCGGTTCGATT+TGG 0.330880 3:-65937622 None:intergenic
CCTGTTCAAATGATTAGTTC+AGG 0.348088 3:+65940151 MsaT014048.1:CDS
ACCGCACAGTAGATCAAATA+TGG 0.353137 3:+65939699 MsaT014048.1:CDS
AGAATGATGCGCAATGAATA+TGG 0.363177 3:+65944095 MsaT014048.1:CDS
ACTATGAACAAACTTAAAAC+TGG 0.365456 3:-65944144 None:intergenic
TCCATCATCAGATGCCTTAT+CGG 0.367159 3:-65940287 None:intergenic
CACCGGTAGTTAAGCCTATC+CGG 0.369584 3:+65940935 MsaT014048.1:CDS
TGCTCATGTTGAAGTCGATT+TGG 0.372468 3:+65940180 MsaT014048.1:CDS
AGTTTCTTTACTTCACAGTT+AGG 0.379004 3:-65940385 None:intergenic
TCTGAGTGAGGTTGACATAT+TGG 0.381000 3:+65940981 MsaT014048.1:CDS
ATCATTCTCCCTAGACTGTT+TGG 0.382492 3:-65944080 None:intergenic
TTCATATTTGAGAGAAGAAC+AGG 0.386983 3:-65937784 None:intergenic
TTGAAGCACGCAGAGGTTAC+AGG 0.387107 3:-65939631 None:intergenic
CCCAGTTGCTTTGCTACCAC+TGG 0.392694 3:-65940215 None:intergenic
TGGAATTGCCGTTATGTGTT+TGG 0.397216 3:-65944124 None:intergenic
CCCAGTGGTAGCAAAGCAAC+TGG 0.397594 3:+65940214 MsaT014048.1:CDS
CAACCAAGCCGTCGATTCTC+TGG 0.399506 3:+65940478 MsaT014048.1:CDS
CTACAACAGGCTCCCTTCCT+AGG 0.401914 3:+65939557 MsaT014048.1:CDS
ACAATCTCCCGCCGGCGAAA+TGG 0.402007 3:+65937582 MsaT014048.1:CDS
GGGAGATTGTCGCCGGAATT+GGG 0.408940 3:-65937569 None:intergenic
CTACCATCATTTGCTGCTAT+AGG 0.423842 3:-65940730 None:intergenic
CTAGGAAGGGAGCCTGTTGT+AGG 0.430759 3:-65939556 None:intergenic
ATTACTGAGATAGTTTATAA+GGG 0.434391 3:+65940433 MsaT014048.1:CDS
TCAAACCTTCTCTTTGAGAA+AGG 0.437993 3:-65940811 None:intergenic
CAAGTTGATGGTAGGGGCAG+TGG 0.449956 3:+65940250 MsaT014048.1:CDS
CCGCCGGCGATACCCAATTC+CGG 0.453556 3:+65937557 MsaT014048.1:CDS
ACTTTCAGTTGCTGCCGATA+AGG 0.459820 3:+65940273 MsaT014048.1:CDS
GTCTGTCCACCTGCAGCTGA+TGG 0.462023 3:-65943981 None:intergenic
GTGAGGACATACCTAGGGTT+AGG 0.463873 3:-65941054 None:intergenic
CGGTTTGAACTCAAAGAAGC+TGG 0.465493 3:-65939680 None:intergenic
ATTAGCCTTGACCTTGGAAT+GGG 0.470410 3:+65944032 MsaT014048.1:CDS
CGGCGAAGCTTCCGATCTCT+AGG 0.471097 3:+65937707 MsaT014048.1:CDS
TCTGAAGATCCAAATCGAAC+CGG 0.473532 3:+65937613 MsaT014048.1:CDS
GAGAATCGACGGCTTGGTTG+AGG 0.474850 3:-65940475 None:intergenic
GAAAATAGACCAAACAGTCT+AGG 0.475775 3:+65944071 MsaT014048.1:CDS
AGGCTTTAATAATTATGGTC+AGG 0.475951 3:+65940666 MsaT014048.1:CDS
CCCGGCGGAATCGTCAAAAC+CGG 0.475991 3:-65937733 None:intergenic
ATGCACAAATGCCGGTTGCC+CGG 0.477441 3:+65943842 MsaT014048.1:CDS
TTCATCTTCTATTACCGTCT+CGG 0.477704 3:-65940555 None:intergenic
CTAGAGATCGGAAGCTTCGC+CGG 0.477996 3:-65937706 None:intergenic
CCTGAACTAATCATTTGAAC+AGG 0.481488 3:-65940151 None:intergenic
ATTATTCTTCCCATGTTCTG+TGG 0.482564 3:-65944278 None:intergenic
CGCCGGCGGGAGATTGTCGC+CGG 0.484100 3:-65937576 None:intergenic
CTTCCCATGTTCTGTGGGCA+AGG 0.486920 3:-65944272 None:intergenic
GAACATGGGAAGAATAATGA+TGG 0.489327 3:+65944283 MsaT014048.1:CDS
GTAGAACCTTCACCTACAAC+AGG 0.492602 3:+65939544 MsaT014048.1:CDS
CCACCAGAGAATCGACGGCT+TGG 0.494093 3:-65940481 None:intergenic
ATATCCTTGCCCACAGAACA+TGG 0.495088 3:+65944268 MsaT014048.1:CDS
TATTACAAATGCACAAATGC+CGG 0.497192 3:+65943834 MsaT014048.1:CDS
GATACAATTGGCGAAAATAT+GGG 0.498237 3:+65940308 MsaT014048.1:CDS
AGGTCCGTCAGAAACAGAAT+CGG 0.499736 3:-65937650 None:intergenic
AATAACAGCGCAAATCCATA+TGG 0.500702 3:+65944200 MsaT014048.1:CDS
GTTATCGCTGGCGTAAATAT+GGG 0.501724 3:+65941010 MsaT014048.1:CDS
TGTACTGTTTGTTGAAGCCT+AGG 0.504067 3:-65939574 None:intergenic
GATGGTAGTCCAGAGGGTGC+AGG 0.508969 3:+65940745 MsaT014048.1:CDS
TGGTGTTCCATTTCGCCGGC+GGG 0.511367 3:-65937589 None:intergenic
ACACCACCTCCGGTATACTT+TGG 0.512830 3:+65944170 MsaT014048.1:CDS
CTGTTCAAATGATTAGTTCA+GGG 0.515203 3:+65940152 MsaT014048.1:CDS
TGGCTATTATGCCTTGCAGT+TGG 0.515932 3:-65943945 None:intergenic
GTACAACGACCCGTGGCTCC+CGG 0.515975 3:-65940954 None:intergenic
AAAATAGACCAAACAGTCTA+GGG 0.516089 3:+65944072 MsaT014048.1:CDS
TATTAGCCTTGACCTTGGAA+TGG 0.516724 3:+65944031 MsaT014048.1:CDS
CTGTTTGTTGAAGCCTAGGA+AGG 0.518291 3:-65939570 None:intergenic
TTCGATTTGGATCTTCAGAA+TGG 0.519220 3:-65937609 None:intergenic
TGCAAGAAGAGAGATCTGAT+AGG 0.520317 3:+65940518 MsaT014048.1:CDS
CCAGTTGCTTTGCTACCACT+GGG 0.520613 3:-65940214 None:intergenic
CATAATAGCCATGACATGGC+AGG 0.522820 3:+65943957 MsaT014048.1:CDS
AGGCTTCAACAAACAGTACA+TGG 0.523911 3:+65939577 MsaT014048.1:CDS
TATGGGCAGAAGGTGGTAAG+AGG 0.524009 3:+65941027 MsaT014048.1:CDS
CATCAGCTTGTATCTAGCTC+CGG 0.524464 3:-65937680 None:intergenic
ATGATCCTTTCTCAAAGAGA+AGG 0.525713 3:+65940806 MsaT014048.1:CDS
AAGTATCACAAGTTGATGGT+AGG 0.527382 3:+65940242 MsaT014048.1:CDS
ACGACCCGTGGCTCCCGGAT+AGG 0.528785 3:-65940949 None:intergenic
GATACTATTAGCCTTGACCT+TGG 0.529882 3:+65944026 MsaT014048.1:CDS
ACCACTGGTCAAAAGTGAAA+CGG 0.530680 3:+65940093 MsaT014048.1:CDS
AGTATCACAAGTTGATGGTA+GGG 0.531769 3:+65940243 MsaT014048.1:CDS
TATCTAGCTCCGGAGGTCGT+AGG 0.534479 3:-65937670 None:intergenic
ATGGCAGGACCATCAGCTGC+AGG 0.534555 3:+65943972 MsaT014048.1:CDS
TGTTCTTCTCTCAAATATGA+AGG 0.535378 3:+65937786 MsaT014048.1:CDS
GCCGATAAGGCATCTGATGA+TGG 0.541580 3:+65940286 MsaT014048.1:CDS
CTGATGGTCCTGCCATGTCA+TGG 0.545201 3:-65943965 None:intergenic
TCATAGTTCTACACCACCTC+CGG 0.545527 3:+65944160 MsaT014048.1:CDS
TTATTCTTCCCATGTTCTGT+GGG 0.545605 3:-65944277 None:intergenic
TTTAGTACACCAAAGTATAC+CGG 0.546728 3:-65944179 None:intergenic
CAGGTGGACAGACAAGAATC+CGG 0.548213 3:+65943991 MsaT014048.1:CDS
GATAGACTTATTTCATCTGA+AGG 0.548631 3:-65940121 None:intergenic
AACGAAGTCGGACTAAGTCC+CGG 0.551853 3:-65937751 None:intergenic
GAGGTTGACATATTGGATGA+TGG 0.552433 3:+65940988 MsaT014048.1:CDS
AAAACCGGCGACCTAGAGAT+CGG 0.552741 3:-65937718 None:intergenic
TAAGCCTATCCGGGAGCCAC+GGG 0.552901 3:+65940945 MsaT014048.1:CDS
CATCTGATGATGGATACAAT+TGG 0.555850 3:+65940296 MsaT014048.1:CDS
ATCGGGTCGTGAAGCTGACC+CGG 0.556542 3:-65937632 None:intergenic
CTTCAAGTATCACAAGTTGA+TGG 0.563805 3:+65940238 MsaT014048.1:CDS
TTGGGCTGAGGCCCATTCCA+AGG 0.564402 3:-65944043 None:intergenic
CTGAAGATCCAAATCGAACC+GGG 0.565065 3:+65937614 MsaT014048.1:CDS
GGCGACAGCCAAACACATAA+CGG 0.565945 3:+65944116 MsaT014048.1:CDS
TCTGACGGACCTACGACCTC+CGG 0.566288 3:+65937661 MsaT014048.1:CDS
TTCACCACAATGGACGCCGC+CGG 0.567268 3:+65937541 None:intergenic
GCATGGTTGTAAAAGTCAGC+AGG 0.568193 3:-65940013 None:intergenic
AGAATGGTGTTCCATTTCGC+CGG 0.568341 3:-65937593 None:intergenic
TTAAGCCTATCCGGGAGCCA+CGG 0.570866 3:+65940944 MsaT014048.1:CDS
GGTCCGTCAGAAACAGAATC+GGG 0.571460 3:-65937649 None:intergenic
AGCAAATGATGGTAGTCCAG+AGG 0.572325 3:+65940738 MsaT014048.1:CDS
GCTTCCGATCTCTAGGTCGC+CGG 0.573754 3:+65937714 MsaT014048.1:CDS
TCGCCGGAATTGGGTATCGC+CGG 0.574304 3:-65937560 None:intergenic
CCAAGCCGTCGATTCTCTGG+TGG 0.580413 3:+65940481 MsaT014048.1:CDS
AGGGAGCCTGTTGTAGGTGA+AGG 0.581773 3:-65939550 None:intergenic
CTCTTTGAACGCTCTCATGA+CGG 0.581939 3:+65940406 MsaT014048.1:CDS
ATGGTAGTCCAGAGGGTGCA+GGG 0.584503 3:+65940746 MsaT014048.1:CDS
CGACCCGATTCTGTTTCTGA+CGG 0.584808 3:+65937646 MsaT014048.1:CDS
GGTTAGAAAACACGTGGAGA+GGG 0.587001 3:+65943863 MsaT014048.1:CDS
CGGTTAGAAAACACGTGGAG+AGG 0.587500 3:+65943862 MsaT014048.1:CDS
GCAAGAAGAGAGATCTGATA+GGG 0.589473 3:+65940519 MsaT014048.1:CDS
TAGATACAAGCTGATGTCGC+CGG 0.590065 3:+65937687 MsaT014048.1:CDS
ACCGGTAGTTAAGCCTATCC+GGG 0.590884 3:+65940936 MsaT014048.1:CDS
GAGTAGATTGTTCACATGCA+TGG 0.590962 3:-65940030 None:intergenic
ATAGACTTATTTCATCTGAA+GGG 0.592974 3:-65940120 None:intergenic
CCGGAATTGGGTATCGCCGG+CGG 0.593081 3:-65937557 None:intergenic
GCTGCTATAGGCGATAGCTC+AGG 0.594070 3:-65940718 None:intergenic
GTATCACAAGTTGATGGTAG+GGG 0.594251 3:+65940244 MsaT014048.1:CDS
TATTGGATGATGGTTATCGC+TGG 0.594327 3:+65940998 MsaT014048.1:CDS
TCGCCTATAGCAGCAAATGA+TGG 0.594806 3:+65940727 MsaT014048.1:CDS
TGAGGCCCATTCCAAGGTCA+AGG 0.597686 3:-65944037 None:intergenic
ATGGTGTTCCATTTCGCCGG+CGG 0.601589 3:-65937590 None:intergenic
GCAAATGATGGTAGTCCAGA+GGG 0.605093 3:+65940739 MsaT014048.1:CDS
ACACCAAAGTATACCGGAGG+TGG 0.606893 3:-65944173 None:intergenic
GCAGGACCATCAGCTGCAGG+TGG 0.606894 3:+65943975 MsaT014048.1:CDS
AATTCTAATTCTGTTGACCA+CGG 0.609429 3:+65939652 MsaT014048.1:CDS
TATTTCCACCAGAGAATCGA+CGG 0.609518 3:-65940486 None:intergenic
CTGGCGTAAATATGGGCAGA+AGG 0.610110 3:+65941017 MsaT014048.1:CDS
TCCCGGATAGGCTTAACTAC+CGG 0.612233 3:-65940937 None:intergenic
TGTTCAAATGATTAGTTCAG+GGG 0.613570 3:+65940153 MsaT014048.1:CDS
TAAGAGGCAATCCTAACCCT+AGG 0.618358 3:+65941043 MsaT014048.1:CDS
TTCCGGCGACAATCTCCCGC+CGG 0.624011 3:+65937574 MsaT014048.1:CDS
GAACAATCTACTCAAATAGA+CGG 0.627319 3:+65940040 MsaT014048.1:CDS
ATCATGATGTACCAACTGCA+AGG 0.636329 3:+65943934 MsaT014048.1:CDS
AACATGGGAAGAATAATGAT+GGG 0.637504 3:+65944284 MsaT014048.1:CDS
TCTACTCAAATAGACGGTCA+AGG 0.650996 3:+65940046 MsaT014048.1:CDS
TGTTTGTTGAAGCCTAGGAA+GGG 0.651244 3:-65939569 None:intergenic
ACCATATTTGATCTACTGTG+CGG 0.651327 3:-65939700 None:intergenic
CAGCTTGTATCTAGCTCCGG+AGG 0.651693 3:-65937677 None:intergenic
AGCTGTAATAACAACATACG+AGG 0.652130 3:+65943902 MsaT014048.1:CDS
CCAGTGGTAGCAAAGCAACT+GGG 0.653075 3:+65940215 MsaT014048.1:CDS
CGTTGTACAAACTCTGAGTG+AGG 0.654216 3:+65940969 MsaT014048.1:CDS
TATCCTTGCCCACAGAACAT+GGG 0.654844 3:+65944269 MsaT014048.1:CDS
TTTAAAGATGAACTATCACT+CGG 0.655794 3:-65944236 None:intergenic
GCGTAAATATGGGCAGAAGG+TGG 0.656556 3:+65941020 MsaT014048.1:CDS
GCTTCTTTAACTAGCCGAGA+CGG 0.657875 3:+65940541 MsaT014048.1:CDS
GTGGGCAAGGATATGCAGAA+CGG 0.659425 3:-65944259 None:intergenic
GTCAAACCAGAATAATGACG+AGG 0.662752 3:+65940774 MsaT014048.1:CDS
GGTGATTCAAGAAACGAAGT+CGG 0.666147 3:-65937763 None:intergenic
AAGGCATAATAGCCATGACA+TGG 0.670187 3:+65943953 MsaT014048.1:CDS
ATTAGAATTGAAGCACGCAG+AGG 0.681984 3:-65939638 None:intergenic
AGAGTTTGTACAACGACCCG+TGG 0.690386 3:-65940961 None:intergenic
GCTGTAATAACAACATACGA+GGG 0.716260 3:+65943903 MsaT014048.1:CDS
TTGCCCGGTTAGAAAACACG+TGG 0.717822 3:+65943857 MsaT014048.1:CDS
GTGCATTTGTAATAACTGCG+TGG 0.733458 3:-65940358 None:intergenic
AGTACACCAAAGTATACCGG+AGG 0.733775 3:-65944176 None:intergenic
GGTGGATCTTGACATCACAC+CGG 0.749303 3:+65940918 MsaT014048.1:CDS
GAAGTCGGACTAAGTCCCGG+CGG 0.782511 3:-65937748 None:intergenic
TTGGACGAATCAAATCCCAG+TGG 0.812893 3:+65940199 MsaT014048.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 65937550 65944313 65937550 ID=MsaG014048
Chr3 mRNA 65937550 65944313 65937550 ID=MsaT014048.1;Parent=MsaG014048
Chr3 exon 65937550 65937807 65937550 ID=MsaT014048.1.exon1;Parent=MsaT014048.1
Chr3 CDS 65937550 65937807 65937550 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Chr3 exon 65939544 65939720 65939544 ID=MsaT014048.1.exon2;Parent=MsaT014048.1
Chr3 CDS 65939544 65939720 65939544 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Chr3 exon 65940010 65940562 65940010 ID=MsaT014048.1.exon3;Parent=MsaT014048.1
Chr3 CDS 65940010 65940562 65940010 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Chr3 exon 65940662 65940827 65940662 ID=MsaT014048.1.exon4;Parent=MsaT014048.1
Chr3 CDS 65940662 65940827 65940662 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Chr3 exon 65940915 65941064 65940915 ID=MsaT014048.1.exon5;Parent=MsaT014048.1
Chr3 CDS 65940915 65941064 65940915 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Chr3 exon 65943830 65944313 65943830 ID=MsaT014048.1.exon6;Parent=MsaT014048.1
Chr3 CDS 65943830 65944313 65943830 ID=cds.MsaT014048.1;Parent=MsaT014048.1
Gene Sequence

>MsaT014048.1

ATGGACGCCGCCGGCGATACCCAATTCCGGCGACAATCTCCCGCCGGCGAAATGGAACACCATTCTGAAGATCCAAATCGAACCGGGTCAGCTTCACGACCCGATTCTGTTTCTGACGGACCTACGACCTCCGGAGCTAGATACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCTAGGTCGCCGGTTTTGACGATTCCGCCGGGACTTAGTCCGACTTCGTTTCTTGAATCACCTGTTCTTCTCTCAAATATGAAGGTAGAACCTTCACCTACAACAGGCTCCCTTCCTAGGCTTCAACAAACAGTACATGGTTTTGTAACTTCTTCTACGTCTGCTGCGTTTCCTGTAACCTCTGCGTGCTTCAATTCTAATTCTGTTGACCACGGAAAATCCAGCTTCTTTGAGTTCAAACCGCACAGTAGATCAAATATGGTTCCTGCTGACTTTTACAACCATGCATGTGAACAATCTACTCAAATAGACGGTCAAGGAAATGCTAAATCTTTTGTCTCGTCACCACTGGTCAAAAGTGAAACGGCAGTCCCTTCAGATGAAATAAGTCTATCATCATCACCTGTTCAAATGATTAGTTCAGGGGCTAGTGCTCATGTTGAAGTCGATTTGGACGAATCAAATCCCAGTGGTAGCAAAGCAACTGGGCTTCAAGTATCACAAGTTGATGGTAGGGGCAGTGGACTTTCAGTTGCTGCCGATAAGGCATCTGATGATGGATACAATTGGCGAAAATATGGGCAGAAGCTTGTTAAAGGATGTGAATTTCCACGCAGTTATTACAAATGCACACATCCTAACTGTGAAGTAAAGAAACTCTTTGAACGCTCTCATGACGGCCAAATTACTGAGATAGTTTATAAGGGAACACATGATCATCCTAAACCTCAACCAAGCCGTCGATTCTCTGGTGGAAATATGATGTCTGTGCAAGAAGAGAGATCTGATAGGGCTTCTTTAACTAGCCGAGACGACAAAGGCTTTAATAATTATGGTCAGGTGTCTCATGCAGCTGAGCGTGACAGTACTCCTGAGCTATCGCCTATAGCAGCAAATGATGGTAGTCCAGAGGGTGCAGGGTTTTTGTCAAACCAGAATAATGACGAGGTTGATGAAGATGATCCTTTCTCAAAGAGAAGAAAGGTGGATCTTGACATCACACCGGTAGTTAAGCCTATCCGGGAGCCACGGGTCGTTGTACAAACTCTGAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAATATGGGCAGAAGGTGGTAAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCCGGTTGCCCGGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACAACATACGAGGGTAAACACAATCATGATGTACCAACTGCAAGGCATAATAGCCATGACATGGCAGGACCATCAGCTGCAGGTGGACAGACAAGAATCCGGCAAGAAGAAAGTGATACTATTAGCCTTGACCTTGGAATGGGCCTCAGCCCAACTGCTGAAAATAGACCAAACAGTCTAGGGAGAATGATGCGCAATGAATATGGCGACAGCCAAACACATAACGGCAATTCCAGTTTTAAGTTTGTTCATAGTTCTACACCACCTCCGGTATACTTTGGTGTACTAAATAACAGCGCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAGTTCATCTTTAAACCGTTCTGCATATCCTTGCCCACAGAACATGGGAAGAATAATGATGGGTCCCTAA

Protein sequence

>MsaT014048.1

MDAAGDTQFRRQSPAGEMEHHSEDPNRTGSASRPDSVSDGPTTSGARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQTVHGFVTSSTSAAFPVTSACFNSNSVDHGKSSFFEFKPHSRSNMVPADFYNHACEQSTQIDGQGNAKSFVSSPLVKSETAVPSDEISLSSSPVQMISSGASAHVEVDLDESNPSGSKATGLQVSQVDGRGSGLSVAADKASDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRFSGGNMMSVQEERSDRASLTSRDDKGFNNYGQVSHAAERDSTPELSPIAANDGSPEGAGFLSNQNNDEVDEDDPFSKRRKVDLDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARHNSHDMAGPSAAGGQTRIRQEESDTISLDLGMGLSPTAENRPNSLGRMMRNEYGDSQTHNGNSSFKFVHSSTPPPVYFGVLNNSANPYGSRENPSDSSSLNRSAYPCPQNMGRIMMGP*