AlfalfaGEDB | MsaG014404

M. sativa ssp. caerulea / MsaG014404

KEGG: -
GO: GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014404	XP_013460262.1	71.831	355	51	5	11	355	41	356	9.63e-164	472

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014404	sp\|P93755\|C3H30_ARATH	38.393	224	105	5	11	228	293	489	3.98e-36	142

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014404	tr\|A0A072UYW3\|A0A072UYW3_MEDTR	71.831	355	51	5	11	355	41	356	4.60e-164	472

TFs/TRs:

Gene ID	Type	Classification
MsaG014404	TF	C3H

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000024	MsaG014404	0.867949	1.893750e-65	2.015679e-62
MsaG001046	MsaG014404	0.809687	2.856965e-50	4.842201e-48
MsaG001238	MsaG014404	0.835015	3.909594e-56	1.310189e-53
MsaG001403	MsaG014404	0.802148	1.080550e-48	1.533747e-46
MsaG001814	MsaG014404	0.812789	6.114076e-51	1.118116e-48
MsaG002201	MsaG014404	0.816982	7.258193e-52	1.475771e-49
MsaG003188	MsaG014404	0.875547	5.864292e-68	8.640536e-65
MsaG004504	MsaG014404	0.812375	7.520320e-51	1.361248e-48
MsaG004806	MsaG014404	0.826227	5.417560e-54	1.409873e-51
MsaG004859	MsaG014404	0.850447	3.215908e-60	1.769882e-57
MsaG005533	MsaG014404	0.839318	3.139464e-57	1.199524e-54
MsaG006048	MsaG014404	0.823796	2.019279e-53	4.915785e-51
MsaG006124	MsaG014404	0.819413	2.058322e-52	4.457419e-50
MsaG006249	MsaG014404	0.831422	3.039110e-55	9.162410e-53
MsaG006304	MsaG014404	0.803763	5.027939e-49	7.407183e-47
MsaG007364	MsaG014404	0.808683	4.678726e-50	7.740475e-48
MsaG007407	MsaG014404	0.803196	6.582039e-49	9.570621e-47
MsaG007602	MsaG014404	0.804245	3.996169e-49	5.953456e-47
MsaG007798	MsaG014404	0.845693	6.506926e-59	3.050672e-56
MsaG008035	MsaG014404	0.805890	1.816151e-49	2.811162e-47
MsaG009196	MsaG014404	0.804653	3.289493e-49	4.946981e-47
MsaG009174	MsaG014404	0.865450	1.171575e-64	1.126877e-61
MsaG010098	MsaG014404	0.819661	1.807327e-52	3.939195e-50
MsaG010263	MsaG014404	0.819167	2.339769e-52	5.034400e-50
MsaG010678	MsaG014404	0.851131	2.068672e-60	1.165758e-57
MsaG011226	MsaG014404	0.833463	9.534224e-56	3.051064e-53
MsaG011443	MsaG014404	0.800920	1.923779e-48	2.655596e-46
MsaG012348	MsaG014404	0.810057	2.381197e-50	4.072019e-48
MsaG012555	MsaG014404	0.807816	7.145753e-50	1.157752e-47
MsaG042546	MsaG014404	0.805126	2.622156e-49	3.987063e-47
MsaG042646	MsaG014404	0.830416	5.349525e-55	1.566725e-52
MsaG043414	MsaG014404	0.800232	2.653275e-48	3.606152e-46
MsaG043881	MsaG014404	0.804660	3.278374e-49	4.931010e-47
MsaG044390	MsaG014404	0.802614	8.672174e-49	1.244185e-46
MsaG044622	MsaG014404	0.859768	6.461566e-63	4.979697e-60
MsaG045004	MsaG014404	0.803494	5.713971e-49	8.365521e-47
MsaG045345	MsaG014404	0.827058	3.439489e-54	9.160424e-52
MsaG045392	MsaG014404	0.817548	5.422220e-52	1.118636e-49
MsaG046214	MsaG014404	0.823974	1.835498e-53	4.489793e-51
MsaG046456	MsaG014404	0.868237	1.531299e-65	1.649624e-62
MsaG003672	MsaG014404	0.804837	3.012161e-49	4.549447e-47
MsaG007338	MsaG014404	0.803024	7.140930e-49	1.034189e-46
MsaG016790	MsaG014404	0.805518	2.172139e-49	3.332895e-47
MsaG013062	MsaG014404	0.845992	5.400067e-59	2.556904e-56
MsaG014581	MsaG014404	0.840026	2.058001e-57	8.040826e-55
MsaG012599	MsaG014404	0.864436	2.427586e-64	2.242505e-61
MsaG013595	MsaG014404	0.815710	1.393398e-51	2.742423e-49
MsaG014404	MsaG011535	0.831555	2.818895e-55	8.531755e-53
MsaG014404	MsaG018096	0.824458	1.414474e-53	3.505853e-51
MsaG014404	MsaG028385	0.815525	1.531303e-51	2.999709e-49
MsaG014404	MsaG027790	0.804636	3.315921e-49	4.984773e-47
MsaG014404	MsaG030963	0.818064	4.151266e-52	8.678926e-50
MsaG014404	MsaG034616	0.810563	1.854069e-50	3.209979e-48
MsaG014404	MsaG031225	0.806802	1.169499e-49	1.849612e-47
MsaG014404	MsaG030960	0.810327	2.083575e-50	3.586674e-48
MsaG014404	MsaG031718	0.831389	3.094977e-55	9.321806e-53
MsaG014404	MsaG033182	0.834002	7.004616e-56	2.277200e-53
MsaG014404	MsaG034183	0.812209	8.173182e-51	1.473275e-48
MsaG014404	MsaG033287	0.803006	7.204041e-49	1.042878e-46
MsaG014404	MsaG037361	0.882724	1.747840e-70	3.586941e-67
MsaG014404	MsaG036665	0.810687	1.743676e-50	3.027913e-48
MsaG014404	MsaG038622	0.823247	2.711087e-53	6.502100e-51
MsaG014404	MsaG037822	0.812994	5.513627e-51	1.013517e-48
MsaG014404	MsaG037204	0.800553	2.284002e-48	3.126960e-46
MsaG014404	MsaG042078	0.827904	2.160783e-54	5.893156e-52
MsaG014404	MsaG046774	0.835005	3.931394e-56	1.317116e-53
MsaG012736	MsaG014404	0.897311	3.610449e-76	1.582781e-72
MsaG016352	MsaG014404	0.852563	8.157105e-61	4.832603e-58
MsaG016540	MsaG014404	0.817933	4.442317e-52	9.256280e-50
MsaG016835	MsaG014404	0.815149	1.854462e-51	3.598281e-49
MsaG017133	MsaG014404	0.808643	4.769981e-50	7.883731e-48
MsaG017355	MsaG014404	0.854939	1.703231e-61	1.097893e-58
MsaG017356	MsaG014404	0.836582	1.573748e-56	5.527610e-54
MsaG018658	MsaG014404	0.821323	7.542104e-53	1.717885e-50
MsaG019066	MsaG014404	0.875823	4.721162e-68	7.043595e-65
MsaG019191	MsaG014404	0.851793	1.346999e-60	7.767922e-58
MsaG020525	MsaG014404	0.803178	6.640554e-49	9.651387e-47
MsaG020658	MsaG014404	0.823199	2.781052e-53	6.661342e-51
MsaG020724	MsaG014404	0.812008	9.035783e-51	1.620763e-48
MsaG021311	MsaG014404	0.809929	2.536226e-50	4.323671e-48
MsaG022044	MsaG014404	0.820479	1.176940e-52	2.621548e-50
MsaG022494	MsaG014404	0.808096	6.233185e-50	1.016719e-47
MsaG022714	MsaG014404	0.820028	1.491108e-52	3.282058e-50
MsaG023025	MsaG014404	0.806674	1.243910e-49	1.961443e-47
MsaG027172	MsaG014404	0.821549	6.691964e-53	1.533387e-50
MsaG027177	MsaG014404	0.861123	2.523186e-63	2.047439e-60
MsaG027359	MsaG014404	0.816396	9.807963e-52	1.964342e-49
MsaG027692	MsaG014404	0.837507	9.153594e-57	3.307013e-54
MsaG027720	MsaG014404	0.801839	1.250023e-48	1.761880e-46
MsaG028091	MsaG014404	0.816613	8.773505e-52	1.766931e-49
MsaG028416	MsaG014404	0.835592	2.799346e-56	9.544490e-54
MsaG028767	MsaG014404	0.818800	2.832907e-52	6.036824e-50
MsaG030592	MsaG014404	0.829175	1.069397e-54	3.022424e-52
MsaG031057	MsaG014404	0.832399	1.748751e-55	5.424066e-53
MsaG031236	MsaG014404	0.847253	2.453064e-59	1.211480e-56
MsaG031754	MsaG014404	0.802565	8.873503e-49	1.271669e-46
MsaG032786	MsaG014404	0.825385	8.565449e-54	2.177544e-51
MsaG032815	MsaG014404	0.804638	3.312932e-49	4.980497e-47
MsaG033014	MsaG014404	0.803358	6.096446e-49	8.897494e-47
MsaG033568	MsaG014404	0.827684	2.439253e-54	6.611498e-52
MsaG033632	MsaG014404	0.829157	1.079922e-54	3.050724e-52
MsaG033633	MsaG014404	0.852961	6.284595e-61	3.776179e-58
MsaG033698	MsaG014404	0.817773	4.825270e-52	1.001282e-49
MsaG033921	MsaG014404	0.849974	4.358041e-60	2.359888e-57
MsaG034328	MsaG014404	0.874793	1.058154e-67	1.508132e-64
MsaG034398	MsaG014404	0.805101	2.654183e-49	4.033307e-47
MsaG035121	MsaG014404	0.801384	1.548068e-48	2.159533e-46
MsaG039374	MsaG014404	0.801402	1.534948e-48	2.142098e-46
MsaG039930	MsaG014404	0.816856	7.744435e-52	1.569472e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014404	MtrunA17_Chr3g0105121	71.831	355	51	5	11	355	41	356	8.86e-168	472
MsaG014404	MtrunA17_Chr3g0105151	59.009	222	70	2	162	362	1	222	8.26e-76	234
MsaG014404	MtrunA17_Chr1g0187591	48.607	323	110	8	11	322	261	538	3.18e-72	236
MsaG014404	MtrunA17_Chr3g0105101	50.840	238	88	6	8	245	193	401	4.39e-63	206
MsaG014404	MtrunA17_Chr3g0105131	44.058	345	126	9	11	339	212	505	1.89e-62	207
MsaG014404	MtrunA17_Chr5g0430211	38.532	327	142	11	11	288	262	578	1.28e-46	168
MsaG014404	MtrunA17_Chr5g0437251	34.140	372	163	13	11	324	249	596	4.78e-39	147
MsaG014404	MtrunA17_Chr3g0105141	71.765	85	23	1	11	95	69	152	2.58e-37	132
MsaG014404	MtrunA17_Chr7g0257831	34.959	246	115	6	11	235	296	517	3.13e-36	139
MsaG014404	MtrunA17_Chr3g0088521	31.988	322	161	9	11	297	296	594	1.62e-32	128
MsaG014404	MtrunA17_Chr3g0113651	61.176	85	32	1	11	95	195	278	5.82e-29	117
MsaG014404	MtrunA17_Chr3g0092171	51.852	108	41	3	11	108	307	413	1.10e-26	110
MsaG014404	MtrunA17_Chr3g0092221	44.545	110	54	2	11	114	190	298	1.53e-26	109
MsaG014404	MtrunA17_Chr3g0135351	54.651	86	39	0	9	94	83	168	2.21e-26	106
MsaG014404	MtrunA17_Chr8g0389561	52.128	94	44	1	9	102	111	203	1.98e-25	105
MsaG014404	MtrunA17_Chr1g0171151	31.799	239	125	7	9	234	274	487	4.80e-25	106
MsaG014404	MtrunA17_Chr6g0487481	55.405	74	32	1	9	82	133	205	2.33e-22	97.1
MsaG014404	MtrunA17_Chr2g0324781	48.780	82	41	1	9	90	107	187	6.49e-21	93.2
MsaG014404	MtrunA17_Chr4g0040391	47.297	74	38	1	9	82	90	162	4.80e-18	84.0
MsaG014404	MtrunA17_Chr3g0105111	55.405	74	26	3	294	362	5	76	3.48e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014404	AT2G41900.1	38.393	224	105	5	11	228	293	489	4.04e-37	142
MsaG014404	AT5G58620.1	35.583	326	165	15	11	322	241	535	2.30e-36	139
MsaG014404	AT2G40140.2	38.710	248	104	9	11	253	246	450	2.19e-35	136
MsaG014404	AT2G40140.1	38.710	248	104	9	11	253	246	450	2.19e-35	136
MsaG014404	AT5G12850.1	38.462	234	116	9	11	235	289	503	5.33e-33	130
MsaG014404	AT3G55980.1	34.472	322	142	16	11	324	243	503	1.10e-31	125
MsaG014404	AT3G55980.2	34.161	322	143	15	11	324	310	570	1.53e-31	125
MsaG014404	AT4G29190.1	41.026	117	68	1	9	125	109	224	9.52e-24	100
MsaG014404	AT1G03790.1	51.685	89	40	1	9	94	112	200	1.72e-23	100
MsaG014404	AT5G44260.1	55.263	76	34	0	9	84	90	165	1.75e-23	100
MsaG014404	AT2G25900.2	46.875	96	50	1	9	104	120	214	8.11e-23	97.8
MsaG014404	AT2G25900.1	46.875	96	50	1	9	104	120	214	8.11e-23	97.8
MsaG014404	AT2G19810.1	50.000	76	37	1	9	84	108	182	7.41e-21	92.8
MsaG014404	AT5G07500.1	54.054	74	33	1	9	82	82	154	8.08e-21	90.9

Find 95 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTAACCTTGAAGGCTATTT+TGG	0.071306	3:+72607943	MsaT014404.1:CDS
AGAACAACGCTTTGCAATAA+TGG	0.289322	3:+72607448	MsaT014404.1:CDS
TGGTTAGATCACAACAGTTC+AGG	0.360050	3:+72608058	MsaT014404.1:CDS
CATCTGTAATTATATTGCTT+TGG	0.368233	3:-72607322	None:intergenic
CTACTTGACCCTTCTATCAT+TGG	0.369851	3:-72607901	None:intergenic
ATGCCGAATCCAATGATAGA+AGG	0.372921	3:+72607892	MsaT014404.1:CDS
GAAGGGTCAAGTAGGCTTGC+TGG	0.383335	3:+72607910	MsaT014404.1:CDS
AATATAGATCATGCAGTAAA+GGG	0.387652	3:+72607368	MsaT014404.1:CDS
TGATCTAACCACATTAGAAT+TGG	0.391379	3:-72608046	None:intergenic
GACCCTTCTATCATTGGATT+CGG	0.397498	3:-72607895	None:intergenic
CCGTGATAGAAAATTAGAAT+TGG	0.404340	3:+72608227	MsaT014404.1:CDS
AAATAGCCTTCAAGGTTAGT+AGG	0.408517	3:-72607940	None:intergenic
CTTCAACTTCCTTGTCCAGT+TGG	0.412059	3:+72608199	MsaT014404.1:CDS
AAATGTCCCTTTGCTCATCA+TGG	0.414986	3:+72607278	None:intergenic
GCACATGGTGTTCTTGAGTC+CGG	0.419484	3:+72607406	MsaT014404.1:CDS
TCTATCACGGGAGCGCCAAC+TGG	0.419922	3:-72608214	None:intergenic
TGTTGCTCTCGATAAAGTTC+TGG	0.421624	3:-72608128	None:intergenic
GGCCACATGGTTCTTTCTGC+AGG	0.427795	3:-72607748	None:intergenic
TACATCAAATGTTGATGATC+AGG	0.442359	3:+72608281	MsaT014404.1:CDS
TGCTAGAGATAATACTCATC+TGG	0.443782	3:+72607843	MsaT014404.1:CDS
TTTCTGAAATTCATTACAAT+GGG	0.449878	3:-72607347	None:intergenic
ACAATCTCCGACAGCAATGC+AGG	0.452955	3:+72607975	MsaT014404.1:CDS
TTCAACGGGCGAAGTTCCTC+AGG	0.454486	3:-72607511	None:intergenic
TTGCTCGGCATCTGAGGTGT+AGG	0.459489	3:-72607709	None:intergenic
TTGCTCGGCATCTGAGGTGT+AGG	0.459489	3:-72607799	None:intergenic
CGTGATAGAAAATTAGAATT+GGG	0.460547	3:+72608228	MsaT014404.1:CDS
AACTGGTACTAGCATTCAAC+GGG	0.465209	3:-72607525	None:intergenic
ATGTGAAGGCAAAGCAGAAC+TGG	0.466124	3:-72607542	None:intergenic
AATTATATTGCTTTGGATCA+CGG	0.469554	3:-72607315	None:intergenic
TGTTGATTAGATTACAATGT+TGG	0.470586	3:-72608357	None:intergenic
ATGGCCCAAAATAGCCTTCA+AGG	0.473088	3:-72607948	None:intergenic
AAATATAGATCATGCAGTAA+AGG	0.479750	3:+72607367	MsaT014404.1:CDS
CAAGATATGATGCCCTTTCG+AGG	0.483484	3:+72608100	MsaT014404.1:CDS
GGCCACATGGTTCTTCCTGC+AGG	0.483695	3:-72607658	None:intergenic
ATTTCTGAAATTCATTACAA+TGG	0.490595	3:-72607348	None:intergenic
GGTTAGATCACAACAGTTCA+GGG	0.493239	3:+72608059	MsaT014404.1:CDS
AGATGCTACCTCAGTTGCAT+TGG	0.493779	3:+72608173	MsaT014404.1:CDS
GTCCAAGGCGGCATCGATGA+AGG	0.500707	3:-72607616	None:intergenic
AATGCAACTGAGGTAGCATC+TGG	0.502784	3:-72608171	None:intergenic
AATCTGTTGCTCGGCATCTG+AGG	0.505565	3:-72607805	None:intergenic
AATGAACTTGTGAAGGAAGA+TGG	0.505957	3:+72608333	MsaT014404.1:CDS
TGAGGTAGCATCTGGAAGCT+TGG	0.508797	3:-72608163	None:intergenic
AATGTCCCTTTGCTCATCAT+GGG	0.509346	3:+72607279	None:intergenic
TGCCTTCATCGATGCCGCCT+TGG	0.512659	3:+72607614	MsaT014404.1:CDS
GATGTATTATTAAGATATGA+AGG	0.519254	3:+72608303	MsaT014404.1:CDS
AATCTGTTGCTCGGCATCTG+AGG	0.528491	3:-72607715	None:intergenic
CACATGGTGTTCTTGAGTCC+GGG	0.529152	3:+72607407	MsaT014404.1:CDS
GTGAATCCTACTAACCTTGA+AGG	0.531036	3:+72607934	MsaT014404.1:CDS
AAGGATATATCTGAAGTTGT+TGG	0.532786	3:-72608014	None:intergenic
CTTTCCCCATGATGAGCAAA+GGG	0.533381	3:-72607284	None:intergenic
TATGATATCAATCTGTTGCT+CGG	0.538210	3:-72607724	None:intergenic
CAACTGGACAAGGAAGTTGA+AGG	0.538569	3:-72608198	None:intergenic
ATTATTAAGATATGAAGGTA+TGG	0.540701	3:+72608308	MsaT014404.1:CDS
AGTTCTGGCTCTGCCTCGAA+AGG	0.544056	3:-72608113	None:intergenic
TAACCACATTAGAATTGGTA+AGG	0.551193	3:-72608041	None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG	0.552789	3:-72607708	None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG	0.552789	3:-72607798	None:intergenic
TATGGTTAATGAACTTGTGA+AGG	0.556348	3:+72608326	MsaT014404.1:CDS
GCAGTATTCAATCTGTTGCT+CGG	0.567984	3:-72607814	None:intergenic
TCACCTTACCAATTCTAATG+TGG	0.568314	3:+72608038	MsaT014404.1:CDS
TTAGAATTGGTAAGGTGAGA+AGG	0.571244	3:-72608033	None:intergenic
GATATTGCAGACGGTGTCCA+AGG	0.573927	3:-72607631	None:intergenic
GCTGTCGGAGATTGTATCGA+TGG	0.577012	3:-72607967	None:intergenic
GCTTTCCCCATGATGAGCAA+AGG	0.578685	3:-72607285	None:intergenic
CAATGATAGAAGGGTCAAGT+AGG	0.578738	3:+72607902	MsaT014404.1:CDS
GTATACATTGCAGAAGCACT+TGG	0.582995	3:-72607583	None:intergenic
CTTCTTTGCTCACAAACCTG+AGG	0.585534	3:+72607495	MsaT014404.1:CDS
TGCCGAATCCAATGATAGAA+GGG	0.587494	3:+72607893	MsaT014404.1:CDS
GTACTAATCTGAGTCGGAGT+CGG	0.588992	3:-72607769	None:intergenic
GTTCTGGCTCTGCCTCGAAA+GGG	0.592388	3:-72608112	None:intergenic
TACTAGCAACACTTCAACAA+TGG	0.593497	3:+72608254	MsaT014404.1:CDS
CTGAGTCGGAGTCGGCCACA+TGG	0.594746	3:-72607671	None:intergenic
CAATCTCCGACAGCAATGCA+GGG	0.598628	3:+72607976	MsaT014404.1:CDS
GTACGATTCTGAGTCGGAGT+CGG	0.598804	3:-72607679	None:intergenic
GAACTGGTACTAGCATTCAA+CGG	0.603434	3:-72607526	None:intergenic
ACGGGAGCGCCAACTGGACA+AGG	0.604298	3:-72608208	None:intergenic
CTGAGTCGGAGTCGGCCACA+TGG	0.607724	3:-72607761	None:intergenic
TGATACCCCTGCATTGCTGT+CGG	0.611093	3:-72607982	None:intergenic
TCTGCAATATCATATCCTGC+AGG	0.614316	3:+72607643	MsaT014404.1:CDS
ACTGTAGTACTAATCTGAGT+CGG	0.618849	3:-72607775	None:intergenic
TTTGAATATAATGTATGTGA+AGG	0.637611	3:-72607556	None:intergenic
GCAGGATATGATATTGCAGA+CGG	0.643899	3:-72607640	None:intergenic
ATATAGATCATGCAGTAAAG+GGG	0.646866	3:+72607369	MsaT014404.1:CDS
TGAAGGCTCCAATGCAACTG+AGG	0.649434	3:-72608181	None:intergenic
ATGTCCCTTTGCTCATCATG+GGG	0.650802	3:+72607280	MsaT014404.1:CDS
CTTTATCGAGAGCAACAGCA+TGG	0.651217	3:+72608134	MsaT014404.1:CDS
ACTGTAGTACGATTCTGAGT+CGG	0.653294	3:-72607685	None:intergenic
GTATCGACTAGGATGCAGCC+CGG	0.668994	3:-72607425	None:intergenic
AGCGTTGTTCTGTATCGACT+AGG	0.678911	3:-72607436	None:intergenic
AATCTCCGACAGCAATGCAG+GGG	0.691632	3:+72607977	MsaT014404.1:CDS
GTTAGATCACAACAGTTCAG+GGG	0.713618	3:+72608060	MsaT014404.1:CDS
ATTGCAGACGGTGTCCAAGG+CGG	0.715505	3:-72607628	None:intergenic
GATGAATGTCAATATGCACA+TGG	0.762142	3:+72607391	MsaT014404.1:CDS
ATCCTGCAGGAAGAACCATG+TGG	0.814597	3:+72607656	MsaT014404.1:CDS
ATCCTGCAGAAAGAACCATG+TGG	0.834161	3:+72607746	MsaT014404.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	72607280	72608368	72607280	ID=MsaG014404
Chr3	mRNA	72607280	72608368	72607280	ID=MsaT014404.1;Parent=MsaG014404
Chr3	exon	72607280	72608368	72607280	ID=MsaT014404.1.exon1;Parent=MsaT014404.1
Chr3	CDS	72607280	72608368	72607280	ID=cds.MsaT014404.1;Parent=MsaT014404.1

Gene Sequence

>MsaT014404.1

ATGTCCCTTTGCTCATCATGGGGAAAGCATAAACGCCGTGATCCAAAGCAATATAATTACAGATGTGCCCATTGTAATGAATTTCAGAAATATAGATCATGCAGTAAAGGGGATGAATGTCAATATGCACATGGTGTTCTTGAGTCCGGGCTGCATCCTAGTCGATACAGAACAACGCTTTGCAATAATGGAACTACATGCACAAGAGAAGTTTGCTTCTTTGCTCACAAACCTGAGGAACTTCGCCCGTTGAATGCTAGTACCAGTTCTGCTTTGCCTTCACATACATTATATTCAAATTCACCAAGTGCTTCTGCAATGTATACTTTCACATTGCCTTCATCGATGCCGCCTTGGACACCGTCTGCAATATCATATCCTGCAGGAAGAACCATGTGGCCGACTCCGACTCAGAATCGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGATATCATATCCTGCAGAAAGAACCATGTGGCCGACTCCGACTCAGATTAGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGAATACTGCATTGAATGCTAGAGATAATACTCATCTGGACATGAAATTTTTCGAATATCACAATATGCCGAATCCAATGATAGAAGGGTCAAGTAGGCTTGCTGGAGTGAATCCTACTAACCTTGAAGGCTATTTTGGGCCATCGATACAATCTCCGACAGCAATGCAGGGGTATCAGAATGTGAACCAACAACTTCAGATATATCCTTCTCACCTTACCAATTCTAATGTGGTTAGATCACAACAGTTCAGGGGTGATCCATTTTTTAATTCAAGATATGATGCCCTTTCGAGGCAGAGCCAGAACTTTATCGAGAGCAACAGCATGGCAAGCTCCAAGCTTCCAGATGCTACCTCAGTTGCATTGGAGCCTTCAACTTCCTTGTCCAGTTGGCGCTCCCGTGATAGAAAATTAGAATTGGGTGATACTAGCAACACTTCAACAATGGCTGCTACATCAAATGTTGATGATCAGGATGTATTATTAAGATATGAAGGTATGGTTAATGAACTTGTGAAGGAAGATGGTCCAACATTGTAA

Protein sequence

>MsaT014404.1

MSLCSSWGKHKRRDPKQYNYRCAHCNEFQKYRSCSKGDECQYAHGVLESGLHPSRYRTTLCNNGTTCTREVCFFAHKPEELRPLNASTSSALPSHTLYSNSPSASAMYTFTLPSSMPPWTPSAISYPAGRTMWPTPTQNRTTVPTPQMPSNRLISYPAERTMWPTPTQISTTVPTPQMPSNRLNTALNARDNTHLDMKFFEYHNMPNPMIEGSSRLAGVNPTNLEGYFGPSIQSPTAMQGYQNVNQQLQIYPSHLTNSNVVRSQQFRGDPFFNSRYDALSRQSQNFIESNSMASSKLPDATSVALEPSTSLSSWRSRDRKLELGDTSNTSTMAATSNVDDQDVLLRYEGMVNELVKEDGPTL*