AlfalfaGEDB | MsaG014587

M. sativa ssp. caerulea / MsaG014587

KEGG: K09260
GO: GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042995 GO:0043076 GO:0043078 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014587	KEH34466.1	96.894	161	5	0	1	161	1	161	1.48e-107	313

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014587	sp\|Q9FJK3\|AGL80_ARATH	45.033	151	83	0	2	152	3	153	2.92e-35	127

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014587	tr\|A0A072UYG1\|A0A072UYG1_MEDTR	96.894	161	5	0	1	161	1	161	7.07e-108	313

TFs/TRs:

Gene ID	Type	Classification
MsaG014587	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000062	MsaG014587	0.830460	5.217655e-55	1.529955e-52
MsaG000083	MsaG014587	0.801059	1.802895e-48	2.496481e-46
MsaG000113	MsaG014587	0.800643	2.190152e-48	3.004602e-46
MsaG000164	MsaG014587	0.801460	1.493257e-48	2.086695e-46
MsaG000238	MsaG014587	0.811621	1.096276e-50	1.947763e-48
MsaG000690	MsaG014587	0.813213	4.939364e-51	9.129371e-49
MsaG000766	MsaG014587	0.814813	2.200439e-51	4.233657e-49
MsaG000940	MsaG014587	0.808158	6.046866e-50	9.878003e-48
MsaG000976	MsaG014587	0.821570	6.617487e-53	1.517162e-50
MsaG001314	MsaG014587	0.818745	2.914950e-52	6.202693e-50
MsaG001322	MsaG014587	0.819226	2.269237e-52	4.890066e-50
MsaG001335	MsaG014587	0.801578	1.412813e-48	1.979533e-46
MsaG001529	MsaG014587	0.854979	1.657885e-61	1.070192e-58
MsaG002359	MsaG014587	0.810547	1.868385e-50	3.233561e-48
MsaG002814	MsaG014587	0.827441	2.788637e-54	7.507018e-52
MsaG002878	MsaG014587	0.801909	1.209414e-48	1.707384e-46
MsaG003188	MsaG014587	0.815648	1.438134e-51	2.826124e-49
MsaG004146	MsaG014587	0.819889	1.603820e-52	3.516991e-50
MsaG005116	MsaG014587	0.854666	2.041185e-61	1.303080e-58
MsaG005294	MsaG014587	0.805587	2.101888e-49	3.230300e-47
MsaG005341	MsaG014587	0.811193	1.356013e-50	2.384148e-48
MsaG005342	MsaG014587	0.871363	1.478421e-66	1.815165e-63
MsaG005547	MsaG014587	0.806755	1.196393e-49	1.890114e-47
MsaG005643	MsaG014587	0.801799	1.273833e-48	1.793809e-46
MsaG005646	MsaG014587	0.821111	8.433525e-53	1.910198e-50
MsaG005909	MsaG014587	0.801039	1.819818e-48	2.518840e-46
MsaG005910	MsaG014587	0.805750	1.943397e-49	2.998173e-47
MsaG006013	MsaG014587	0.803630	5.358141e-49	7.869090e-47
MsaG005943	MsaG014587	0.801394	1.540556e-48	2.149560e-46
MsaG006116	MsaG014587	0.818291	3.691419e-52	7.762646e-50
MsaG006120	MsaG014587	0.810726	1.710123e-50	2.972538e-48
MsaG006517	MsaG014587	0.800473	2.371077e-48	3.240274e-46
MsaG006884	MsaG014587	0.818842	2.771850e-52	5.913223e-50
MsaG007033	MsaG014587	0.806336	1.464629e-49	2.291166e-47
MsaG007290	MsaG014587	0.801922	1.202162e-48	1.697626e-46
MsaG007281	MsaG014587	0.833969	7.137734e-56	2.318247e-53
MsaG007911	MsaG014587	0.840915	1.207605e-57	4.851697e-55
MsaG007950	MsaG014587	0.808513	5.083495e-50	8.375530e-48
MsaG008006	MsaG014587	0.806385	1.430498e-49	2.240346e-47
MsaG008033	MsaG014587	0.804303	3.887930e-49	5.800004e-47
MsaG008296	MsaG014587	0.861286	2.252144e-63	1.838877e-60
MsaG008815	MsaG014587	0.809424	3.251921e-50	5.476820e-48
MsaG008988	MsaG014587	0.811441	1.199070e-50	2.121016e-48
MsaG008991	MsaG014587	0.845373	7.933810e-59	3.680556e-56
MsaG009094	MsaG014587	0.830993	3.869226e-55	1.152091e-52
MsaG009196	MsaG014587	0.813116	5.186514e-51	9.562855e-49
MsaG009269	MsaG014587	0.804617	3.345727e-49	5.027402e-47
MsaG010063	MsaG014587	0.822803	3.435275e-53	8.140987e-51
MsaG010372	MsaG014587	0.801233	1.661402e-48	2.309655e-46
MsaG011014	MsaG014587	0.863868	3.643071e-64	3.290025e-61
MsaG011226	MsaG014587	0.843500	2.516466e-58	1.098107e-55
MsaG011240	MsaG014587	0.863047	6.528786e-64	5.708615e-61
MsaG011248	MsaG014587	0.805016	2.764807e-49	4.193257e-47
MsaG012203	MsaG014587	0.833284	1.056467e-55	3.362936e-53
MsaG012262	MsaG014587	0.835153	3.609560e-56	1.214593e-53
MsaG012302	MsaG014587	0.837140	1.135168e-56	4.055259e-54
MsaG041873	MsaG014587	0.800593	2.241746e-48	3.071896e-46
MsaG043392	MsaG014587	0.810189	2.230076e-50	3.825908e-48
MsaG043815	MsaG014587	0.805957	1.758589e-49	2.726313e-47
MsaG043878	MsaG014587	0.817237	6.364016e-52	1.302534e-49
MsaG044305	MsaG014587	0.823302	2.632120e-53	6.322205e-51
MsaG044307	MsaG014587	0.835855	2.402751e-56	8.257041e-54
MsaG044309	MsaG014587	0.803560	5.538895e-49	8.121628e-47
MsaG044312	MsaG014587	0.843824	2.063740e-58	9.098474e-56
MsaG044315	MsaG014587	0.809378	3.327003e-50	5.596759e-48
MsaG044345	MsaG014587	0.816028	1.184365e-51	2.349884e-49
MsaG044710	MsaG014587	0.818598	3.146981e-52	6.670856e-50
MsaG044886	MsaG014587	0.813416	4.459322e-51	8.284122e-49
MsaG045212	MsaG014587	0.804318	3.859744e-49	5.759882e-47
MsaG045269	MsaG014587	0.813285	4.764734e-51	8.822093e-49
MsaG045323	MsaG014587	0.825618	7.550452e-54	1.931871e-51
MsaG045351	MsaG014587	0.817570	5.359161e-52	1.106261e-49
MsaG045894	MsaG014587	0.804961	2.838583e-49	4.299565e-47
MsaG045922	MsaG014587	0.817454	5.689826e-52	1.171035e-49
MsaG046004	MsaG014587	0.816821	7.886128e-52	1.596747e-49
MsaG046084	MsaG014587	0.806960	1.082941e-49	1.719113e-47
MsaG046214	MsaG014587	0.857001	4.272363e-62	2.968308e-59
MsaG046215	MsaG014587	0.805418	2.279520e-49	3.489539e-47
MsaG046515	MsaG014587	0.808306	5.624721e-50	9.221100e-48
MsaG046867	MsaG014587	0.803595	5.446770e-49	7.992913e-47
MsaG047088	MsaG014587	0.845341	8.097031e-59	3.752014e-56
MsaG004516	MsaG014587	0.811883	9.617137e-51	1.719787e-48
MsaG002955	MsaG014587	0.809274	3.501988e-50	5.876194e-48
MsaG002769	MsaG014587	0.837823	7.603919e-57	2.773573e-54
MsaG000809	MsaG014587	0.831741	2.538578e-55	7.725552e-53
MsaG000819	MsaG014587	0.849275	6.814994e-60	3.603436e-57
MsaG002774	MsaG014587	0.809124	3.768806e-50	6.301591e-48
MsaG003212	MsaG014587	0.804463	3.601563e-49	5.392512e-47
MsaG009147	MsaG014587	0.828064	1.978303e-54	5.419595e-52
MsaG010178	MsaG014587	0.826523	4.609762e-54	1.209591e-51
MsaG008053	MsaG014587	0.838446	5.263015e-57	1.957131e-54
MsaG010441	MsaG014587	0.808424	5.310737e-50	8.731076e-48
MsaG009149	MsaG014587	0.813918	3.461561e-51	6.512179e-49
MsaG007527	MsaG014587	0.800703	2.129795e-48	2.925747e-46
MsaG011637	MsaG014587	0.812972	5.576741e-51	1.024542e-48
MsaG013001	MsaG014587	0.813671	3.922196e-51	7.332896e-49
MsaG014587	MsaG014456	0.834239	6.113098e-56	2.001516e-53
MsaG014587	MsaG012349	0.802185	1.061976e-48	1.508656e-46
MsaG014587	MsaG013062	0.851887	1.267215e-60	7.332316e-58
MsaG014587	MsaG014581	0.828548	1.514090e-54	4.204782e-52
MsaG014587	MsaG012599	0.837849	7.487395e-57	2.733262e-54
MsaG014587	MsaG012532	0.816167	1.103130e-51	2.196516e-49
MsaG014587	MsaG012697	0.821627	6.421821e-53	1.474545e-50
MsaG014587	MsaG014392	0.801566	1.420671e-48	1.990021e-46
MsaG014587	MsaG020018	0.804875	2.957963e-49	4.471474e-47
MsaG014587	MsaG028148	0.816836	7.824400e-52	1.584864e-49
MsaG014587	MsaG027405	0.815975	1.216756e-51	2.410984e-49
MsaG014587	MsaG027793	0.872864	4.707842e-67	6.165583e-64
MsaG014587	MsaG033743	0.815622	1.457722e-51	2.862638e-49
MsaG014587	MsaG034616	0.805920	1.790017e-49	2.772644e-47
MsaG014587	MsaG033837	0.803039	7.090492e-49	1.027240e-46
MsaG014587	MsaG034269	0.823256	2.698068e-53	6.472565e-51
MsaG014587	MsaG034192	0.803391	6.001732e-49	8.765980e-47
MsaG014587	MsaG031467	0.808819	4.377937e-50	7.266347e-48
MsaG014587	MsaG032081	0.812038	8.902845e-51	1.598072e-48
MsaG014587	MsaG031525	0.856950	4.422993e-62	3.067409e-59
MsaG014587	MsaG033287	0.854266	2.661240e-61	1.674989e-58
MsaG014587	MsaG036708	0.825512	7.997949e-54	2.040476e-51
MsaG014587	MsaG037076	0.845015	9.907624e-59	4.542671e-56
MsaG014587	MsaG036640	0.875973	4.197823e-68	6.304437e-65
MsaG014587	MsaG043148	0.815828	1.312175e-51	2.590268e-49
MsaG014587	MsaG046894	0.808498	5.121757e-50	8.435480e-48
MsaG012813	MsaG014587	0.807920	6.793130e-50	1.103401e-47
MsaG013082	MsaG014587	0.801649	1.366703e-48	1.918035e-46
MsaG013238	MsaG014587	0.803720	5.131932e-49	7.552993e-47
MsaG013912	MsaG014587	0.823810	2.004766e-53	4.882241e-51
MsaG014031	MsaG014587	0.802881	7.642583e-49	1.103181e-46
MsaG014208	MsaG014587	0.803767	5.020196e-49	7.396348e-47
MsaG014337	MsaG014587	0.802914	7.523337e-49	1.086783e-46
MsaG014483	MsaG014587	0.816892	7.604499e-52	1.542564e-49
MsaG015090	MsaG014587	0.831718	2.571783e-55	7.821561e-53
MsaG015295	MsaG014587	0.801954	1.183707e-48	1.672789e-46
MsaG015527	MsaG014587	0.808502	5.112663e-50	8.421243e-48
MsaG016250	MsaG014587	0.806560	1.314465e-49	2.067141e-47
MsaG016584	MsaG014587	0.824200	1.625379e-53	4.000248e-51
MsaG016749	MsaG014587	0.801251	1.647480e-48	2.291250e-46
MsaG016646	MsaG014587	0.846727	3.412982e-59	1.656150e-56
MsaG017063	MsaG014587	0.808925	4.154447e-50	6.913235e-48
MsaG017259	MsaG014587	0.821914	5.514141e-53	1.275825e-50
MsaG017395	MsaG014587	0.820288	1.301219e-52	2.883883e-50
MsaG017526	MsaG014587	0.837964	6.994678e-57	2.562589e-54
MsaG017552	MsaG014587	0.884867	2.858119e-71	6.503640e-68
MsaG017676	MsaG014587	0.830964	3.933309e-55	1.170169e-52
MsaG018059	MsaG014587	0.807328	9.060201e-50	1.450842e-47
MsaG018658	MsaG014587	0.806446	1.389053e-49	2.178612e-47
MsaG018628	MsaG014587	0.868646	1.132007e-65	1.239994e-62
MsaG018876	MsaG014587	0.816880	7.651374e-52	1.551571e-49
MsaG019335	MsaG014587	0.800649	2.183627e-48	2.996090e-46
MsaG019430	MsaG014587	0.800172	2.728839e-48	3.703782e-46
MsaG019438	MsaG014587	0.808285	5.684799e-50	9.314878e-48
MsaG019576	MsaG014587	0.819853	1.634866e-52	3.581555e-50
MsaG019640	MsaG014587	0.820156	1.394181e-52	3.079163e-50
MsaG019906	MsaG014587	0.829981	6.821818e-55	1.973255e-52
MsaG020525	MsaG014587	0.800956	1.891859e-48	2.613658e-46
MsaG020583	MsaG014587	0.804359	3.785149e-49	5.654007e-47
MsaG020618	MsaG014587	0.823395	2.504098e-53	6.029924e-51
MsaG020978	MsaG014587	0.829913	7.086865e-55	2.045947e-52
MsaG020982	MsaG014587	0.819216	2.281178e-52	4.914567e-50
MsaG021053	MsaG014587	0.817041	7.042461e-52	1.434095e-49
MsaG021085	MsaG014587	0.816655	8.587400e-52	1.731291e-49
MsaG021312	MsaG014587	0.823244	2.715186e-53	6.511482e-51
MsaG021463	MsaG014587	0.859478	7.886732e-63	6.011606e-60
MsaG022304	MsaG014587	0.855874	9.121309e-62	6.081938e-59
MsaG022408	MsaG014587	0.820841	9.728845e-53	2.187721e-50
MsaG022456	MsaG014587	0.806103	1.639353e-49	2.550300e-47
MsaG022795	MsaG014587	0.816151	1.112125e-51	2.213534e-49
MsaG023020	MsaG014587	0.812260	7.966728e-51	1.437881e-48
MsaG023049	MsaG014587	0.817209	6.456981e-52	1.320592e-49
MsaG022955	MsaG014587	0.856677	5.319019e-62	3.652563e-59
MsaG022979	MsaG014587	0.821000	8.944158e-53	2.019961e-50
MsaG023223	MsaG014587	0.827557	2.615046e-54	7.063094e-52
MsaG023225	MsaG014587	0.815741	1.371381e-51	2.701217e-49
MsaG023226	MsaG014587	0.821683	6.232573e-53	1.433233e-50
MsaG023575	MsaG014587	0.805419	2.277963e-49	3.487273e-47
MsaG023786	MsaG014587	0.801363	1.562884e-48	2.179183e-46
MsaG023798	MsaG014587	0.808015	6.484103e-50	1.055607e-47
MsaG024274	MsaG014587	0.851838	1.308490e-60	7.557859e-58
MsaG025416	MsaG014587	0.827848	2.228412e-54	6.068026e-52
MsaG025418	MsaG014587	0.831571	2.794297e-55	8.461063e-53
MsaG025598	MsaG014587	0.819601	1.865603e-52	4.059793e-50
MsaG026698	MsaG014587	0.829931	7.016156e-55	2.026577e-52
MsaG027172	MsaG014587	0.813472	4.336881e-51	8.067787e-49
MsaG027224	MsaG014587	0.801960	1.180663e-48	1.668698e-46
MsaG027720	MsaG014587	0.817422	5.786844e-52	1.190008e-49
MsaG027747	MsaG014587	0.832509	1.642476e-55	5.111099e-53
MsaG028041	MsaG014587	0.871057	1.863688e-66	2.258511e-63
MsaG028056	MsaG014587	0.869590	5.608439e-66	6.388520e-63
MsaG028019	MsaG014587	0.813821	3.635955e-51	6.823653e-49
MsaG028020	MsaG014587	0.865081	1.528233e-64	1.448509e-61
MsaG028043	MsaG014587	0.800514	2.326243e-48	3.181917e-46
MsaG028303	MsaG014587	0.814015	3.295940e-51	6.215416e-49
MsaG028306	MsaG014587	0.801871	1.231395e-48	1.736919e-46
MsaG028419	MsaG014587	0.841516	8.410225e-58	3.443892e-55
MsaG028886	MsaG014587	0.801402	1.535093e-48	2.142290e-46
MsaG028967	MsaG014587	0.837619	8.570643e-57	3.106842e-54
MsaG029193	MsaG014587	0.835975	2.240544e-56	7.727400e-54
MsaG029200	MsaG014587	0.805724	1.967915e-49	3.034143e-47
MsaG029341	MsaG014587	0.812060	8.806783e-51	1.581625e-48
MsaG029478	MsaG014587	0.809866	2.615828e-50	4.452700e-48
MsaG029613	MsaG014587	0.811961	9.250284e-51	1.657359e-48
MsaG029779	MsaG014587	0.810412	1.997679e-50	3.446037e-48
MsaG030246	MsaG014587	0.810598	1.821855e-50	3.156902e-48
MsaG030517	MsaG014587	0.846234	4.644864e-59	2.217047e-56
MsaG031568	MsaG014587	0.804779	3.096190e-49	4.670004e-47
MsaG031787	MsaG014587	0.803677	5.238358e-49	7.701812e-47
MsaG032200	MsaG014587	0.804804	3.060023e-49	4.618142e-47
MsaG033221	MsaG014587	0.815833	1.308818e-51	2.583972e-49
MsaG033632	MsaG014587	0.826575	4.482510e-54	1.177875e-51
MsaG033723	MsaG014587	0.827747	2.355806e-54	6.396788e-52
MsaG034943	MsaG014587	0.893026	2.053252e-74	7.107423e-71
MsaG035008	MsaG014587	0.807243	9.440326e-50	1.508643e-47
MsaG035152	MsaG014587	0.851561	1.566570e-60	8.959881e-58
MsaG035155	MsaG014587	0.893891	9.211374e-75	3.340482e-71
MsaG035642	MsaG014587	0.838321	5.668242e-57	2.099555e-54
MsaG035867	MsaG014587	0.832158	2.004434e-55	6.174376e-53
MsaG036410	MsaG014587	0.801962	1.179261e-48	1.666822e-46
MsaG036844	MsaG014587	0.811869	9.684813e-51	1.731284e-48
MsaG036980	MsaG014587	0.824357	1.493758e-53	3.692236e-51
MsaG037118	MsaG014587	0.889161	6.794976e-73	1.917372e-69
MsaG037122	MsaG014587	0.914912	2.725497e-84	3.573283e-80
MsaG037124	MsaG014587	0.915100	2.185391e-84	2.902275e-80
MsaG037226	MsaG014587	0.877648	1.110342e-68	1.798189e-65
MsaG037234	MsaG014587	0.820580	1.116245e-52	2.492960e-50
MsaG037236	MsaG014587	0.845246	8.587777e-59	3.966853e-56
MsaG037355	MsaG014587	0.851947	1.219006e-60	7.068369e-58
MsaG037407	MsaG014587	0.889666	4.332751e-73	1.255263e-69
MsaG037412	MsaG014587	0.849734	5.082785e-60	2.729950e-57
MsaG037920	MsaG014587	0.813895	3.503597e-51	6.587232e-49
MsaG038498	MsaG014587	0.805682	2.007247e-49	3.091817e-47
MsaG039395	MsaG014587	0.820863	9.615539e-53	2.163568e-50
MsaG039429	MsaG014587	0.831245	3.356861e-55	1.006783e-52
MsaG039908	MsaG014587	0.830356	5.531921e-55	1.617361e-52
MsaG039911	MsaG014587	0.836553	1.599962e-56	5.615007e-54
MsaG039917	MsaG014587	0.808665	4.719026e-50	7.803873e-48
MsaG039930	MsaG014587	0.801242	1.654233e-48	2.300180e-46
MsaG039818	MsaG014587	0.821912	5.520678e-53	1.277269e-50
MsaG039828	MsaG014587	0.807675	7.654643e-50	1.235973e-47
MsaG039847	MsaG014587	0.840508	1.542371e-57	6.117802e-55
MsaG039867	MsaG014587	0.847583	1.992203e-59	9.948522e-57
MsaG040016	MsaG014587	0.813717	3.831961e-51	7.172453e-49
MsaG040185	MsaG014587	0.803499	5.702021e-49	8.348816e-47
MsaG040310	MsaG014587	0.837153	1.126943e-56	4.027363e-54
MsaG040314	MsaG014587	0.819274	2.212599e-52	4.774138e-50
MsaG040435	MsaG014587	0.822648	3.733174e-53	8.809524e-51
MsaG040535	MsaG014587	0.800079	2.848911e-48	3.858835e-46
MsaG040539	MsaG014587	0.808649	4.757912e-50	7.864814e-48
MsaG040673	MsaG014587	0.814014	3.298069e-51	6.219260e-49
MsaG041347	MsaG014587	0.827902	2.163292e-54	5.899649e-52
MsaG041599	MsaG014587	0.848965	8.306385e-60	4.345695e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014587	MtrunA17_Chr3g0107341	96.894	161	5	0	1	161	1	161	1.36e-111	313
MsaG014587	MtrunA17_Chr3g0107351	93.168	161	11	0	1	161	1	161	4.42e-109	307
MsaG014587	MtrunA17_Chr3g0107361	90.683	161	15	0	1	161	1	161	3.45e-105	297
MsaG014587	MtrunA17_Chr3g0107331	78.125	160	35	0	1	160	1	160	8.13e-90	258
MsaG014587	MtrunA17_Chr3g0110131	49.045	157	80	0	2	158	3	159	9.87e-46	149
MsaG014587	MtrunA17_Chr8g0351751	43.750	160	87	2	2	158	3	162	5.65e-43	142
MsaG014587	MtrunA17_Chr3g0107381	41.830	153	89	0	2	154	3	155	1.79e-41	138
MsaG014587	MtrunA17_Chr4g0014321	40.881	159	91	2	2	158	3	160	2.92e-40	135
MsaG014587	MtrunA17_Chr4g0014031	44.025	159	88	1	2	159	3	161	1.26e-39	133
MsaG014587	MtrunA17_Chr1g0197261	43.871	155	86	1	2	156	3	156	1.36e-39	131
MsaG014587	MtrunA17_Chr4g0013041	41.333	150	85	2	4	152	5	152	8.14e-38	128
MsaG014587	MtrunA17_Chr1g0197461	42.038	157	90	1	1	157	1	156	9.44e-38	126
MsaG014587	MtrunA17_Chr5g0432691	43.038	158	90	0	4	161	5	162	1.92e-36	123
MsaG014587	MtrunA17_Chr2g0296831	47.899	119	62	0	2	120	3	121	1.41e-35	120
MsaG014587	MtrunA17_Chr4g0014131	44.654	159	87	1	2	159	3	161	1.54e-35	123
MsaG014587	MtrunA17_Chr4g0014121	45.752	153	82	1	1	152	30	182	1.96e-35	121
MsaG014587	MtrunA17_Chr5g0420351	41.558	154	89	1	2	155	3	155	1.70e-33	115
MsaG014587	MtrunA17_Chr1g0197321	41.667	156	89	2	2	156	3	157	5.07e-33	114
MsaG014587	MtrunA17_Chr4g0012761	42.857	154	87	1	2	155	3	155	3.39e-30	107
MsaG014587	MtrunA17_Chr7g0218151	42.857	154	87	1	2	155	3	155	3.90e-30	107
MsaG014587	MtrunA17_Chr1g0188681	40.132	152	90	1	1	152	2	152	4.73e-30	107
MsaG014587	MtrunA17_Chr1g0188661	42.857	154	87	1	2	155	3	155	3.58e-29	105
MsaG014587	MtrunA17_Chr2g0283941	38.000	150	92	1	4	152	5	154	4.56e-29	107
MsaG014587	MtrunA17_Chr3g0106501	42.308	130	72	2	29	156	2	130	3.55e-28	102
MsaG014587	MtrunA17_Chr1g0193311	40.909	154	90	1	2	155	3	155	4.10e-28	102
MsaG014587	MtrunA17_Chr3g0107461	35.484	155	99	1	2	155	3	157	4.88e-27	99.4
MsaG014587	MtrunA17_Chr1g0188651	39.216	153	88	3	1	152	2	150	8.49e-23	88.6
MsaG014587	MtrunA17_Chr3g0106421	35.385	130	83	1	29	157	2	131	9.38e-23	89.7
MsaG014587	MtrunA17_Chr2g0296861	36.486	148	94	0	5	152	6	153	2.52e-22	87.4
MsaG014587	MtrunA17_Chr7g0267601	31.373	153	104	1	2	154	6	157	4.58e-19	83.2
MsaG014587	MtrunA17_Chr4g0008701	30.065	153	106	1	2	154	6	157	2.19e-18	81.3
MsaG014587	MtrunA17_Chr3g0105791	33.594	128	84	1	29	155	2	129	1.27e-17	74.7
MsaG014587	MtrunA17_Chr3g0128721	28.387	155	111	0	2	156	6	160	3.75e-17	77.4
MsaG014587	MtrunA17_Chr4g0031421	32.812	128	85	1	29	155	2	129	2.43e-16	71.2
MsaG014587	MtrunA17_Chr6g0457851	31.677	161	94	7	2	155	13	164	4.37e-14	68.6
MsaG014587	MtrunA17_Chr6g0449861	33.043	115	70	3	2	110	11	124	2.76e-12	63.2
MsaG014587	MtrunA17_Chr1g0212151	33.621	116	68	4	2	110	3	116	4.47e-12	62.8
MsaG014587	MtrunA17_Chr6g0449851	32.759	116	71	3	2	111	3	117	8.85e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG014587	AT5G48670.1	45.033	151	83	0	2	152	3	153	2.97e-36	127
MsaG014587	AT1G65300.1	36.842	152	96	0	1	152	1	152	3.74e-31	113
MsaG014587	AT1G65330.1	37.342	158	99	0	1	158	1	158	3.84e-30	110
MsaG014587	AT5G26630.1	36.306	157	100	0	2	158	3	159	5.52e-28	103
MsaG014587	AT5G27960.1	39.316	117	71	0	4	120	3	119	1.94e-26	102
MsaG014587	AT5G26650.1	33.548	155	103	0	4	158	3	157	2.41e-26	102
MsaG014587	AT3G05860.2	35.948	153	98	0	2	154	3	155	2.50e-25	96.7
MsaG014587	AT3G05860.3	35.948	153	98	0	2	154	3	155	6.70e-25	96.7
MsaG014587	AT3G05860.1	35.948	153	98	0	2	154	3	155	9.20e-25	96.7
MsaG014587	AT5G27810.1	44.565	92	51	0	29	120	2	93	1.56e-23	89.7
MsaG014587	AT1G31630.1	29.814	161	112	1	1	161	1	160	2.38e-22	91.7
MsaG014587	AT1G31640.1	30.464	151	104	1	1	151	1	150	2.46e-20	87.0
MsaG014587	AT5G26580.1	32.886	149	86	1	4	152	5	139	7.95e-20	84.7
MsaG014587	AT2G28700.1	31.579	152	104	0	2	153	3	154	1.89e-18	80.9
MsaG014587	AT1G22590.2	34.906	106	68	1	2	107	3	107	2.25e-16	72.4
MsaG014587	AT2G40210.1	37.374	99	62	0	2	100	3	101	7.66e-13	65.5
MsaG014587	AT5G58890.1	39.130	92	48	3	5	89	6	96	9.01e-11	59.3

Find 33 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGAAGTCAAAAGAGAAAT+TGG	0.291455	3:-75577943	MsaT014587.1:CDS
AAAAGAGAAATTGGTGAAAG+TGG	0.384195	3:-75577934	MsaT014587.1:CDS
GAAGGTGAAACTTGCATTCA+TGG	0.384908	3:-75578213	MsaT014587.1:CDS
GAACCAAGAGAGCTATTTGA+TGG	0.414546	3:-75577973	MsaT014587.1:CDS
CTTGTCGGAGACATTCAAAC+AGG	0.421968	3:+75577877	None:intergenic
GGACTTCTCCATCTCCCAAT+TGG	0.425670	3:+75577905	None:intergenic
TTCATTCAGAGCCTGAGGTC+TGG	0.433093	3:-75578073	MsaT014587.1:CDS
AACGGGGAAGGCCAGACCTC+AGG	0.443199	3:+75578062	None:intergenic
TCAAAAGTTATTCAGAAGTC+GGG	0.444131	3:-75578013	MsaT014587.1:CDS
TCTCCATCAAATAGCTCTCT+TGG	0.453856	3:+75577970	None:intergenic
TTCAAAAGTTATTCAGAAGT+CGG	0.458207	3:-75578014	MsaT014587.1:CDS
TAATCCTTTGAACCTCCAAC+GGG	0.460280	3:+75578045	None:intergenic
CTTCCCCGTTGGAGGTTCAA+AGG	0.471467	3:-75578049	MsaT014587.1:CDS
GGTCTGGCCTTCCCCGTTGG+AGG	0.473960	3:-75578057	MsaT014587.1:CDS
TGAGGTCTGGCCTTCCCCGT+TGG	0.479692	3:-75578060	MsaT014587.1:CDS
TGAAAGTGGAGAAAACCAAT+TGG	0.503387	3:-75577920	MsaT014587.1:CDS
ATTCAGAAGTCGGGCAAGGA+AGG	0.517455	3:-75578004	MsaT014587.1:CDS
GATGAACTCACTACCCTATG+TGG	0.541478	3:-75578128	MsaT014587.1:CDS
GAAAGTGGAGAAAACCAATT+GGG	0.551602	3:-75577919	MsaT014587.1:CDS
GCATACATCAATCCCACATA+GGG	0.556455	3:+75578115	None:intergenic
GAGACATTCAAACAGGATCA+AGG	0.560270	3:+75577884	None:intergenic
AAGAGAGCTATTTGATGGAG+AGG	0.560879	3:-75577968	MsaT014587.1:CDS
ATAATCCTTTGAACCTCCAA+CGG	0.563355	3:+75578044	None:intergenic
CTTTGAACCTCCAACGGGGA+AGG	0.577453	3:+75578050	None:intergenic
CGCATACATCAATCCCACAT+AGG	0.579304	3:+75578114	None:intergenic
TGAAATTAATGAGAAGCTGA+AGG	0.586053	3:-75577805	MsaT014587.1:CDS
GGAGAAAACCAATTGGGAGA+TGG	0.587398	3:-75577913	MsaT014587.1:CDS
ATGAACTCACTACCCTATGT+GGG	0.601587	3:-75578127	MsaT014587.1:CDS
AGTTATTCAGAAGTCGGGCA+AGG	0.603949	3:-75578008	MsaT014587.1:CDS
CGAATTTCATTCAGAGCCTG+AGG	0.605230	3:-75578078	MsaT014587.1:CDS
TCATGGTCAATGATTCTGCA+AGG	0.642899	3:-75578196	MsaT014587.1:CDS
TACATTGAGGATGAGAACGA+AGG	0.687755	3:-75578231	None:intergenic
AATCCTTTGAACCTCCAACG+GGG	0.766026	3:+75578046	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	75577758	75578243	75577758	ID=MsaG014587
Chr3	mRNA	75577758	75578243	75577758	ID=MsaT014587.1;Parent=MsaG014587
Chr3	exon	75577758	75578243	75577758	ID=MsaT014587.1.exon1;Parent=MsaT014587.1
Chr3	CDS	75577758	75578243	75577758	ID=cds.MsaT014587.1;Parent=MsaT014587.1

Gene Sequence

>MsaT014587.1

ATGAGAACGAAGGTGAAACTTGCATTCATGGTCAATGATTCTGCAAGGAAAATAACTTACAACAAAAGAAAAAAGAGTCTGAAAAAGATGGTTGATGAACTCACTACCCTATGTGGGATTGATGTATGCGCTATACTGTATAGCGAATTTCATTCAGAGCCTGAGGTCTGGCCTTCCCCGTTGGAGGTTCAAAGGATTATCACAAAGTTCAAAAGTTATTCAGAAGTCGGGCAAGGAAGGAAGAAGTTGAACCAAGAGAGCTATTTGATGGAGAGGATTGTGAAGTCAAAAGAGAAATTGGTGAAAGTGGAGAAAACCAATTGGGAGATGGAGAAGTCCTTGATCCTGTTTGAATGTCTCCGACAAGAAAATTTTATCAACACTTTGAACACAAACGTTTTGAATGATCTAGCATATGAAATTAATGAGAAGCTGAAGGAAATTACTTCGAAGATGAATCAGCTTGACACAAATGAAAGCACTTAG

Protein sequence

>MsaT014587.1

MRTKVKLAFMVNDSARKITYNKRKKSLKKMVDELTTLCGIDVCAILYSEFHSEPEVWPSPLEVQRIITKFKSYSEVGQGRKKLNQESYLMERIVKSKEKLVKVEKTNWEMEKSLILFECLRQENFINTLNTNVLNDLAYEINEKLKEITSKMNQLDTNEST*