Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG014910 | KEH34714.1 | 89.815 | 108 | 11 | 0 | 21 | 128 | 2 | 109 | 8.97e-66 | 204 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG014910 | sp|Q9FKK2|AGL62_ARATH | 56.198 | 121 | 51 | 1 | 6 | 124 | 4 | 124 | 5.60e-38 | 133 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG014910 | tr|A0A072UY28|A0A072UY28_MEDTR | 89.815 | 108 | 11 | 0 | 21 | 128 | 2 | 109 | 4.28e-66 | 204 |
Gene ID | Type | Classification |
---|---|---|
MsaG014910 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsaG006806 | MsaG014910 | 0.807195 | 9.663974e-50 | 1.542655e-47 |
MsaG014910 | MsaG014976 | 0.892178 | 4.474793e-74 | 1.479544e-70 |
MsaG014910 | MsaG017088 | 0.806109 | 1.634311e-49 | 2.542805e-47 |
MsaG014910 | MsaG021098 | 0.804262 | 3.964689e-49 | 5.908853e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG014910 | MtrunA17_Chr3g0111931 | 89.815 | 108 | 11 | 0 | 21 | 128 | 2 | 109 | 8.25e-70 | 204 |
MsaG014910 | MtrunA17_Chr2g0317451 | 73.171 | 123 | 33 | 0 | 1 | 123 | 1 | 123 | 6.35e-61 | 187 |
MsaG014910 | MtrunA17_Chr2g0317481 | 73.171 | 123 | 33 | 0 | 1 | 123 | 1 | 123 | 7.15e-61 | 186 |
MsaG014910 | MtrunA17_Chr5g0419601 | 77.049 | 122 | 28 | 0 | 1 | 122 | 1 | 122 | 2.71e-60 | 185 |
MsaG014910 | MtrunA17_Chr3g0099411 | 72.358 | 123 | 34 | 0 | 1 | 123 | 1 | 123 | 2.06e-59 | 182 |
MsaG014910 | MtrunA17_Chr1g0206721 | 72.358 | 123 | 34 | 0 | 1 | 123 | 1 | 123 | 3.71e-59 | 182 |
MsaG014910 | MtrunA17_Chr8g0355091 | 70.732 | 123 | 36 | 0 | 1 | 123 | 1 | 123 | 3.70e-58 | 179 |
MsaG014910 | MtrunA17_Chr5g0422421 | 72.656 | 128 | 35 | 0 | 1 | 128 | 1 | 128 | 4.71e-58 | 179 |
MsaG014910 | MtrunA17_Chr1g0188671 | 71.311 | 122 | 35 | 0 | 1 | 122 | 39 | 160 | 1.19e-57 | 179 |
MsaG014910 | MtrunA17_Chr1g0187361 | 70.312 | 128 | 38 | 0 | 1 | 128 | 1 | 128 | 1.48e-57 | 178 |
MsaG014910 | MtrunA17_Chr5g0422941 | 71.545 | 123 | 35 | 0 | 1 | 123 | 1 | 123 | 2.66e-57 | 177 |
MsaG014910 | MtrunA17_Chr1g0206701 | 70.833 | 120 | 35 | 0 | 1 | 120 | 1 | 120 | 1.87e-56 | 175 |
MsaG014910 | MtrunA17_Chr1g0206991 | 69.106 | 123 | 38 | 0 | 1 | 123 | 1 | 123 | 9.71e-56 | 172 |
MsaG014910 | MtrunA17_Chr2g0292791 | 69.106 | 123 | 38 | 0 | 1 | 123 | 1 | 123 | 1.22e-55 | 173 |
MsaG014910 | MtrunA17_Chr3g0099421 | 69.106 | 123 | 38 | 0 | 1 | 123 | 26 | 148 | 2.05e-55 | 173 |
MsaG014910 | MtrunA17_Chr1g0208561 | 67.480 | 123 | 40 | 0 | 1 | 123 | 1 | 123 | 1.50e-53 | 167 |
MsaG014910 | MtrunA17_Chr1g0149391 | 69.919 | 123 | 37 | 0 | 1 | 123 | 1 | 123 | 3.26e-53 | 167 |
MsaG014910 | MtrunA17_Chr3g0089141 | 67.480 | 123 | 40 | 0 | 1 | 123 | 1 | 123 | 3.36e-53 | 167 |
MsaG014910 | MtrunA17_Chr1g0208581 | 65.854 | 123 | 42 | 0 | 1 | 123 | 1 | 123 | 2.03e-52 | 165 |
MsaG014910 | MtrunA17_Chr2g0325971 | 67.480 | 123 | 40 | 0 | 1 | 123 | 1 | 123 | 2.17e-52 | 164 |
MsaG014910 | MtrunA17_Chr3g0089151 | 60.976 | 123 | 48 | 0 | 1 | 123 | 1 | 123 | 5.16e-49 | 153 |
MsaG014910 | MtrunA17_Chr2g0300421 | 63.415 | 123 | 45 | 0 | 1 | 123 | 1 | 123 | 8.73e-49 | 154 |
MsaG014910 | MtrunA17_Chr2g0300441 | 61.789 | 123 | 47 | 0 | 1 | 123 | 1 | 123 | 4.25e-46 | 149 |
MsaG014910 | MtrunA17_Chr1g0206691 | 64.762 | 105 | 37 | 0 | 18 | 122 | 1 | 105 | 1.07e-42 | 140 |
MsaG014910 | MtrunA17_Chr3g0085241 | 51.639 | 122 | 59 | 0 | 3 | 124 | 35 | 156 | 4.64e-39 | 131 |
MsaG014910 | MtrunA17_Chr3g0119901 | 52.500 | 120 | 57 | 0 | 9 | 128 | 9 | 128 | 6.93e-38 | 127 |
MsaG014910 | MtrunA17_Chr7g0238991 | 51.181 | 127 | 61 | 1 | 3 | 128 | 14 | 140 | 3.29e-34 | 119 |
MsaG014910 | MtrunA17_Chr1g0187351 | 72.727 | 66 | 18 | 0 | 18 | 83 | 1 | 66 | 2.06e-29 | 101 |
MsaG014910 | MtrunA17_Chr3g0111841 | 83.051 | 59 | 10 | 0 | 15 | 73 | 2 | 60 | 5.17e-28 | 98.2 |
MsaG014910 | MtrunA17_Chr3g0111831 | 68.852 | 61 | 19 | 0 | 16 | 76 | 11 | 71 | 1.40e-21 | 82.0 |
MsaG014910 | MtrunA17_Chr2g0333981 | 49.351 | 77 | 39 | 0 | 1 | 77 | 4 | 80 | 2.02e-21 | 84.3 |
MsaG014910 | MtrunA17_Chr8g0379021 | 47.126 | 87 | 39 | 1 | 4 | 90 | 7 | 86 | 2.80e-21 | 84.0 |
MsaG014910 | MtrunA17_Chr1g0169761 | 49.296 | 71 | 36 | 0 | 9 | 79 | 2 | 72 | 1.83e-20 | 82.0 |
MsaG014910 | MtrunA17_Chr8g0376821 | 49.296 | 71 | 36 | 0 | 9 | 79 | 2 | 72 | 5.34e-20 | 80.9 |
MsaG014910 | MtrunA17_Chr4g0074101 | 36.842 | 114 | 57 | 2 | 9 | 107 | 2 | 115 | 6.36e-20 | 80.9 |
MsaG014910 | MtrunA17_Chr1g0175601 | 44.156 | 77 | 43 | 0 | 9 | 85 | 2 | 78 | 1.87e-19 | 79.3 |
MsaG014910 | MtrunA17_Chr8g0357771 | 44.304 | 79 | 44 | 0 | 9 | 87 | 2 | 80 | 4.43e-19 | 78.2 |
MsaG014910 | MtrunA17_Chr4g0018951 | 51.948 | 77 | 37 | 0 | 4 | 80 | 7 | 83 | 8.51e-19 | 77.4 |
MsaG014910 | MtrunA17_Chr1g0180591 | 41.772 | 79 | 46 | 0 | 9 | 87 | 2 | 80 | 1.24e-18 | 77.0 |
MsaG014910 | MtrunA17_Chr1g0175611 | 44.304 | 79 | 44 | 0 | 9 | 87 | 2 | 80 | 1.62e-18 | 76.6 |
MsaG014910 | MtrunA17_Chr8g0356071 | 43.662 | 71 | 40 | 0 | 9 | 79 | 2 | 72 | 1.63e-17 | 73.9 |
MsaG014910 | MtrunA17_Chr4g0071601 | 51.948 | 77 | 37 | 0 | 1 | 77 | 4 | 80 | 1.30e-16 | 72.0 |
MsaG014910 | MtrunA17_Chr4g0052061 | 37.736 | 106 | 64 | 1 | 9 | 114 | 2 | 105 | 8.31e-16 | 69.3 |
MsaG014910 | MtrunA17_Chr4g0049901 | 51.515 | 66 | 32 | 0 | 10 | 75 | 29 | 94 | 9.28e-16 | 70.9 |
MsaG014910 | MtrunA17_Chr4g0020221 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 1.44e-15 | 70.5 |
MsaG014910 | MtrunA17_Chr5g0427401 | 46.479 | 71 | 38 | 0 | 9 | 79 | 2 | 72 | 1.50e-15 | 70.1 |
MsaG014910 | MtrunA17_Chr2g0279821 | 44.737 | 76 | 42 | 0 | 9 | 84 | 2 | 77 | 1.11e-14 | 67.8 |
MsaG014910 | MtrunA17_Chr3g0077501 | 45.588 | 68 | 37 | 0 | 9 | 76 | 2 | 69 | 1.74e-14 | 67.0 |
MsaG014910 | MtrunA17_Chr4g0057151 | 45.205 | 73 | 40 | 0 | 10 | 82 | 3 | 75 | 2.26e-14 | 66.6 |
MsaG014910 | MtrunA17_Chr8g0351051 | 41.837 | 98 | 55 | 1 | 9 | 104 | 2 | 99 | 2.38e-14 | 67.0 |
MsaG014910 | MtrunA17_Chr4g0049541 | 35.238 | 105 | 67 | 1 | 9 | 112 | 2 | 106 | 6.65e-14 | 65.5 |
MsaG014910 | MtrunA17_Chr5g0411691 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.33e-13 | 65.1 |
MsaG014910 | MtrunA17_Chr3g0097101 | 43.243 | 74 | 42 | 0 | 3 | 76 | 11 | 84 | 1.51e-13 | 65.1 |
MsaG014910 | MtrunA17_Chr4g0052081 | 46.377 | 69 | 37 | 0 | 9 | 77 | 2 | 70 | 1.63e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr7g0246431 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 2.00e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr6g0474371 | 47.826 | 69 | 35 | 1 | 9 | 76 | 2 | 70 | 2.00e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr8g0380021 | 45.588 | 68 | 37 | 0 | 9 | 76 | 18 | 85 | 2.59e-13 | 64.3 |
MsaG014910 | MtrunA17_Chr5g0412271 | 46.269 | 67 | 36 | 0 | 10 | 76 | 3 | 69 | 2.63e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr8g0351041 | 44.000 | 75 | 42 | 0 | 10 | 84 | 3 | 77 | 2.85e-13 | 62.8 |
MsaG014910 | MtrunA17_Chr5g0420081 | 44.928 | 69 | 37 | 1 | 9 | 76 | 2 | 70 | 3.13e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr5g0412461 | 46.269 | 67 | 36 | 0 | 10 | 76 | 3 | 69 | 3.74e-13 | 63.5 |
MsaG014910 | MtrunA17_Chr2g0284911 | 45.588 | 68 | 37 | 0 | 9 | 76 | 17 | 84 | 3.79e-13 | 63.9 |
MsaG014910 | MtrunA17_Chr1g0204111 | 48.529 | 68 | 35 | 0 | 9 | 76 | 18 | 85 | 4.62e-13 | 63.5 |
MsaG014910 | MtrunA17_Chr8g0366231 | 43.478 | 69 | 38 | 1 | 9 | 76 | 2 | 70 | 5.70e-13 | 63.2 |
MsaG014910 | MtrunA17_Chr8g0351031 | 46.377 | 69 | 37 | 0 | 10 | 78 | 3 | 71 | 7.73e-13 | 62.8 |
MsaG014910 | MtrunA17_Chr5g0427921 | 47.458 | 59 | 31 | 0 | 9 | 67 | 2 | 60 | 1.04e-12 | 58.9 |
MsaG014910 | MtrunA17_Chr1g0173161 | 50.820 | 61 | 30 | 0 | 9 | 69 | 2 | 62 | 1.55e-12 | 58.9 |
MsaG014910 | MtrunA17_Chr1g0164791 | 45.714 | 70 | 36 | 1 | 9 | 76 | 2 | 71 | 1.97e-12 | 61.6 |
MsaG014910 | MtrunA17_Chr4g0061691 | 44.928 | 69 | 37 | 1 | 9 | 76 | 2 | 70 | 2.16e-12 | 61.6 |
MsaG014910 | MtrunA17_Chr7g0220121 | 41.667 | 72 | 41 | 1 | 9 | 79 | 2 | 73 | 3.89e-12 | 61.2 |
MsaG014910 | MtrunA17_Chr7g0220111 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 4.98e-12 | 60.8 |
MsaG014910 | MtrunA17_Chr5g0420091 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 7.91e-12 | 59.7 |
MsaG014910 | MtrunA17_Chr4g0061671 | 47.458 | 59 | 31 | 0 | 9 | 67 | 2 | 60 | 1.06e-11 | 58.9 |
MsaG014910 | MtrunA17_Chr8g0377561 | 50.000 | 56 | 28 | 0 | 9 | 64 | 2 | 57 | 2.51e-11 | 56.2 |
MsaG014910 | MtrunA17_Chr6g0455511 | 43.478 | 69 | 38 | 1 | 9 | 76 | 2 | 70 | 4.16e-11 | 58.2 |
MsaG014910 | MtrunA17_Chr2g0308251 | 40.278 | 72 | 43 | 0 | 9 | 80 | 2 | 73 | 6.49e-11 | 54.7 |
MsaG014910 | MtrunA17_Chr7g0246381 | 46.667 | 60 | 32 | 0 | 9 | 68 | 2 | 61 | 6.92e-11 | 54.3 |
MsaG014910 | MtrunA17_Chr3g0134451 | 39.773 | 88 | 51 | 2 | 9 | 95 | 2 | 88 | 7.58e-11 | 58.2 |
MsaG014910 | MtrunA17_Chr3g0122251 | 46.667 | 60 | 32 | 0 | 9 | 68 | 2 | 61 | 7.78e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG014910 | AT5G60440.1 | 56.198 | 121 | 51 | 1 | 6 | 124 | 4 | 124 | 5.70e-39 | 133 |
MsaG014910 | AT4G36590.1 | 54.630 | 108 | 40 | 2 | 7 | 107 | 5 | 110 | 4.15e-29 | 106 |
MsaG014910 | AT1G65360.1 | 50.980 | 102 | 48 | 1 | 6 | 107 | 4 | 103 | 1.84e-25 | 96.3 |
MsaG014910 | AT1G01530.1 | 50.000 | 102 | 49 | 1 | 6 | 107 | 4 | 103 | 2.98e-25 | 96.3 |
MsaG014910 | AT2G24840.1 | 61.972 | 71 | 27 | 0 | 9 | 79 | 63 | 133 | 3.75e-25 | 96.3 |
MsaG014910 | AT2G34440.1 | 38.739 | 111 | 67 | 1 | 9 | 119 | 2 | 111 | 2.54e-20 | 81.6 |
MsaG014910 | AT1G72350.1 | 50.685 | 73 | 34 | 1 | 9 | 81 | 43 | 113 | 9.42e-19 | 79.0 |
MsaG014910 | AT3G04100.1 | 35.043 | 117 | 71 | 2 | 6 | 117 | 11 | 127 | 4.43e-18 | 76.6 |
MsaG014910 | AT3G66656.1 | 50.000 | 68 | 34 | 0 | 9 | 76 | 2 | 69 | 3.31e-17 | 73.9 |
MsaG014910 | AT2G45650.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 5.10e-16 | 72.0 |
MsaG014910 | AT5G13790.2 | 50.000 | 68 | 34 | 0 | 9 | 76 | 2 | 69 | 1.76e-15 | 70.9 |
MsaG014910 | AT5G13790.1 | 50.000 | 68 | 34 | 0 | 9 | 76 | 2 | 69 | 1.85e-15 | 70.9 |
MsaG014910 | AT5G62165.14 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 2.28e-15 | 67.4 |
MsaG014910 | AT5G51870.4 | 50.746 | 67 | 33 | 0 | 10 | 76 | 3 | 69 | 3.31e-15 | 69.3 |
MsaG014910 | AT5G51870.5 | 49.296 | 71 | 36 | 0 | 6 | 76 | 22 | 92 | 3.73e-15 | 68.9 |
MsaG014910 | AT5G51860.2 | 50.746 | 67 | 33 | 0 | 10 | 76 | 3 | 69 | 3.78e-15 | 68.9 |
MsaG014910 | AT5G51870.1 | 50.746 | 67 | 33 | 0 | 10 | 76 | 3 | 69 | 3.89e-15 | 68.9 |
MsaG014910 | AT5G51870.3 | 50.746 | 67 | 33 | 0 | 10 | 76 | 13 | 79 | 4.06e-15 | 69.3 |
MsaG014910 | AT5G51870.2 | 50.746 | 67 | 33 | 0 | 10 | 76 | 3 | 69 | 4.22e-15 | 68.2 |
MsaG014910 | AT3G57390.3 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 4.52e-15 | 68.9 |
MsaG014910 | AT2G45660.2 | 48.529 | 68 | 35 | 0 | 10 | 77 | 3 | 70 | 4.79e-15 | 67.8 |
MsaG014910 | AT5G62165.17 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 5.56e-15 | 67.4 |
MsaG014910 | AT5G62165.12 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 5.56e-15 | 67.4 |
MsaG014910 | AT5G62165.11 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 5.56e-15 | 67.4 |
MsaG014910 | AT2G22540.3 | 42.268 | 97 | 51 | 1 | 10 | 101 | 3 | 99 | 5.72e-15 | 68.9 |
MsaG014910 | AT2G22540.1 | 42.268 | 97 | 51 | 1 | 10 | 101 | 3 | 99 | 5.72e-15 | 68.9 |
MsaG014910 | AT5G51860.1 | 50.746 | 67 | 33 | 0 | 10 | 76 | 3 | 69 | 6.29e-15 | 68.6 |
MsaG014910 | AT3G57390.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 6.37e-15 | 69.3 |
MsaG014910 | AT3G61120.1 | 51.471 | 68 | 33 | 0 | 9 | 76 | 2 | 69 | 7.86e-15 | 68.6 |
MsaG014910 | AT4G22950.2 | 44.737 | 76 | 42 | 0 | 10 | 85 | 3 | 78 | 8.96e-15 | 67.4 |
MsaG014910 | AT2G45660.1 | 48.529 | 68 | 35 | 0 | 10 | 77 | 3 | 70 | 9.89e-15 | 68.2 |
MsaG014910 | AT5G62165.10 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.04e-14 | 67.8 |
MsaG014910 | AT5G62165.4 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.04e-14 | 67.8 |
MsaG014910 | AT5G62165.3 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.07e-14 | 67.8 |
MsaG014910 | AT5G62165.1 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.07e-14 | 67.8 |
MsaG014910 | AT5G62165.2 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.07e-14 | 67.8 |
MsaG014910 | AT3G57230.2 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.07e-14 | 66.6 |
MsaG014910 | AT4G24540.1 | 48.529 | 68 | 35 | 0 | 9 | 76 | 2 | 69 | 1.33e-14 | 67.8 |
MsaG014910 | AT5G62165.6 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.58e-14 | 66.2 |
MsaG014910 | AT5G62165.9 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.58e-14 | 66.2 |
MsaG014910 | AT5G62165.7 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.58e-14 | 66.2 |
MsaG014910 | AT5G62165.8 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.58e-14 | 66.2 |
MsaG014910 | AT5G62165.13 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.58e-14 | 66.2 |
MsaG014910 | AT4G22950.3 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.89e-14 | 67.4 |
MsaG014910 | AT4G22950.1 | 49.254 | 67 | 34 | 0 | 10 | 76 | 3 | 69 | 1.89e-14 | 67.4 |
MsaG014910 | AT4G09960.3 | 42.857 | 77 | 43 | 1 | 1 | 76 | 19 | 95 | 2.01e-14 | 67.8 |
MsaG014910 | AT4G37940.3 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 2.62e-14 | 66.2 |
MsaG014910 | AT4G18960.1 | 44.000 | 75 | 42 | 0 | 2 | 76 | 11 | 85 | 2.94e-14 | 67.4 |
MsaG014910 | AT4G09960.5 | 44.444 | 72 | 40 | 0 | 5 | 76 | 8 | 79 | 2.99e-14 | 67.0 |
MsaG014910 | AT4G09960.2 | 45.588 | 68 | 37 | 0 | 9 | 76 | 2 | 69 | 3.24e-14 | 66.6 |
MsaG014910 | AT4G09960.6 | 45.588 | 68 | 37 | 0 | 9 | 76 | 3 | 70 | 3.88e-14 | 66.6 |
MsaG014910 | AT4G09960.1 | 45.588 | 68 | 37 | 0 | 9 | 76 | 2 | 69 | 4.04e-14 | 66.6 |
MsaG014910 | AT4G37940.4 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 4.18e-14 | 66.2 |
MsaG014910 | AT4G37940.1 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 5.05e-14 | 66.2 |
MsaG014910 | AT4G09960.4 | 45.588 | 68 | 37 | 0 | 9 | 76 | 97 | 164 | 9.33e-14 | 66.6 |
MsaG014910 | AT3G57230.1 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 9.58e-14 | 65.9 |
MsaG014910 | AT3G57230.4 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 9.58e-14 | 65.9 |
MsaG014910 | AT2G22630.1 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.66e-13 | 65.1 |
MsaG014910 | AT2G22630.2 | 47.059 | 68 | 36 | 0 | 9 | 76 | 2 | 69 | 1.66e-13 | 65.1 |
MsaG014910 | AT1G26310.1 | 44.928 | 69 | 37 | 1 | 9 | 76 | 2 | 70 | 2.19e-13 | 65.1 |
MsaG014910 | AT5G10140.4 | 44.444 | 72 | 39 | 1 | 9 | 79 | 2 | 73 | 4.63e-13 | 63.2 |
MsaG014910 | AT3G58780.1 | 45.070 | 71 | 39 | 0 | 6 | 76 | 14 | 84 | 4.77e-13 | 63.9 |
MsaG014910 | AT2G42830.2 | 45.588 | 68 | 37 | 0 | 9 | 76 | 17 | 84 | 4.96e-13 | 63.9 |
MsaG014910 | AT2G42830.1 | 45.588 | 68 | 37 | 0 | 9 | 76 | 17 | 84 | 5.02e-13 | 63.9 |
MsaG014910 | AT3G58780.5 | 45.070 | 71 | 39 | 0 | 6 | 76 | 20 | 90 | 5.37e-13 | 63.9 |
MsaG014910 | AT5G10140.2 | 44.444 | 72 | 39 | 1 | 9 | 79 | 2 | 73 | 5.62e-13 | 62.4 |
MsaG014910 | AT5G10140.1 | 44.444 | 72 | 39 | 1 | 9 | 79 | 2 | 73 | 6.15e-13 | 62.8 |
MsaG014910 | AT1G77950.3 | 43.421 | 76 | 41 | 2 | 9 | 83 | 2 | 76 | 6.40e-13 | 63.5 |
MsaG014910 | AT1G77950.2 | 43.421 | 76 | 41 | 2 | 9 | 83 | 2 | 76 | 6.40e-13 | 63.5 |
MsaG014910 | AT1G77950.1 | 43.421 | 76 | 41 | 2 | 9 | 83 | 2 | 76 | 6.40e-13 | 63.5 |
MsaG014910 | AT1G77950.4 | 43.421 | 76 | 41 | 2 | 9 | 83 | 2 | 76 | 6.40e-13 | 63.5 |
MsaG014910 | AT1G69120.2 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 6.52e-13 | 63.5 |
MsaG014910 | AT1G17310.1 | 48.649 | 74 | 36 | 1 | 8 | 81 | 47 | 118 | 6.61e-13 | 63.2 |
MsaG014910 | AT2G14210.1 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 7.93e-13 | 63.2 |
MsaG014910 | AT1G28460.1 | 31.532 | 111 | 76 | 0 | 6 | 116 | 5 | 115 | 7.99e-13 | 62.4 |
MsaG014910 | AT5G10140.3 | 44.444 | 72 | 39 | 1 | 9 | 79 | 2 | 73 | 8.52e-13 | 62.4 |
MsaG014910 | AT3G58780.4 | 45.070 | 71 | 39 | 0 | 6 | 76 | 14 | 84 | 9.05e-13 | 63.5 |
MsaG014910 | AT2G14210.2 | 46.377 | 69 | 36 | 1 | 9 | 76 | 2 | 70 | 9.16e-13 | 63.2 |
MsaG014910 | AT1G69120.1 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 1.03e-12 | 63.2 |
MsaG014910 | AT1G17310.2 | 48.649 | 74 | 36 | 1 | 8 | 81 | 58 | 129 | 1.04e-12 | 62.8 |
MsaG014910 | AT2G22540.2 | 41.237 | 97 | 47 | 2 | 10 | 101 | 3 | 94 | 1.44e-12 | 62.4 |
MsaG014910 | AT1G77980.1 | 45.070 | 71 | 38 | 1 | 9 | 78 | 2 | 72 | 2.20e-12 | 62.8 |
MsaG014910 | AT1G22130.1 | 38.043 | 92 | 56 | 1 | 9 | 99 | 2 | 93 | 3.42e-12 | 62.4 |
MsaG014910 | AT4G11880.4 | 45.833 | 72 | 38 | 1 | 10 | 80 | 3 | 74 | 3.77e-12 | 61.2 |
MsaG014910 | AT4G11880.1 | 45.833 | 72 | 38 | 1 | 10 | 80 | 3 | 74 | 3.77e-12 | 61.2 |
MsaG014910 | AT5G60910.1 | 43.478 | 69 | 38 | 1 | 9 | 76 | 2 | 70 | 4.85e-12 | 61.2 |
MsaG014910 | AT5G23260.2 | 43.662 | 71 | 38 | 1 | 9 | 77 | 2 | 72 | 5.81e-12 | 61.2 |
MsaG014910 | AT5G23260.1 | 43.662 | 71 | 38 | 1 | 9 | 77 | 18 | 88 | 5.97e-12 | 61.2 |
MsaG014910 | AT5G23260.4 | 43.662 | 71 | 38 | 1 | 9 | 77 | 18 | 88 | 6.13e-12 | 61.2 |
MsaG014910 | AT5G23260.3 | 43.662 | 71 | 38 | 1 | 9 | 77 | 2 | 72 | 6.34e-12 | 60.8 |
MsaG014910 | AT4G11880.2 | 48.529 | 68 | 34 | 1 | 10 | 76 | 3 | 70 | 7.17e-12 | 59.7 |
MsaG014910 | AT4G11880.3 | 48.529 | 68 | 34 | 1 | 10 | 76 | 3 | 70 | 7.17e-12 | 59.7 |
MsaG014910 | AT5G15800.1 | 44.928 | 69 | 37 | 1 | 9 | 76 | 2 | 70 | 8.22e-12 | 60.5 |
MsaG014910 | AT3G30260.1 | 40.580 | 69 | 40 | 1 | 9 | 76 | 2 | 70 | 9.13e-12 | 60.5 |
MsaG014910 | AT5G15800.2 | 44.928 | 69 | 37 | 1 | 9 | 76 | 2 | 70 | 1.24e-11 | 60.1 |
MsaG014910 | AT3G02310.2 | 43.478 | 69 | 38 | 1 | 9 | 76 | 2 | 70 | 2.20e-11 | 58.9 |
MsaG014910 | AT5G65050.2 | 40.580 | 69 | 40 | 1 | 9 | 76 | 2 | 70 | 3.05e-11 | 58.2 |
MsaG014910 | AT5G65070.1 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 3.70e-11 | 58.2 |
MsaG014910 | AT5G65070.4 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 3.99e-11 | 57.0 |
MsaG014910 | AT2G03710.3 | 48.214 | 56 | 29 | 0 | 9 | 64 | 2 | 57 | 4.42e-11 | 57.8 |
MsaG014910 | AT5G65050.3 | 40.580 | 69 | 40 | 1 | 9 | 76 | 2 | 70 | 5.10e-11 | 57.8 |
MsaG014910 | AT5G65050.1 | 40.580 | 69 | 40 | 1 | 9 | 76 | 2 | 70 | 5.40e-11 | 57.4 |
MsaG014910 | AT1G29962.1 | 33.000 | 100 | 64 | 2 | 6 | 102 | 5 | 104 | 5.40e-11 | 57.4 |
MsaG014910 | AT1G24260.2 | 50.000 | 56 | 28 | 0 | 9 | 64 | 2 | 57 | 5.50e-11 | 58.5 |
MsaG014910 | AT1G24260.1 | 50.000 | 56 | 28 | 0 | 9 | 64 | 2 | 57 | 5.63e-11 | 58.2 |
MsaG014910 | AT1G24260.3 | 50.000 | 56 | 28 | 0 | 9 | 64 | 2 | 57 | 5.66e-11 | 58.2 |
MsaG014910 | AT5G65050.5 | 40.580 | 69 | 40 | 1 | 9 | 76 | 2 | 70 | 5.99e-11 | 57.4 |
MsaG014910 | AT5G65070.2 | 42.029 | 69 | 39 | 1 | 9 | 76 | 2 | 70 | 6.91e-11 | 57.8 |
MsaG014910 | AT2G03710.2 | 48.214 | 56 | 29 | 0 | 9 | 64 | 2 | 57 | 8.68e-11 | 57.8 |
MsaG014910 | AT2G03710.1 | 48.214 | 56 | 29 | 0 | 9 | 64 | 2 | 57 | 9.09e-11 | 57.8 |
Find 16 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGCAAGATGCCATTGTTT+TGG | 0.345850 | 3:+80129975 | None:intergenic |
AGTGAGCTTTGCACCCTTTG+TGG | 0.424656 | 3:-80130103 | MsaT014910.1:CDS |
CATAAATCGTTATATCTCTC+AGG | 0.481105 | 3:-80130005 | MsaT014910.1:CDS |
AATGAGCCTCATTTCGCAGC+TGG | 0.487825 | 3:+80129848 | None:intergenic |
GCATCGTTCTTACGAGTCAA+TGG | 0.513645 | 3:+80129908 | None:intergenic |
AGCAACATATGCACCACAAA+GGG | 0.521852 | 3:+80130090 | None:intergenic |
TATATTCTCACATGGTGAGA+AGG | 0.553842 | 3:-80130062 | MsaT014910.1:CDS |
TTTGAGCCAGCTGCGAAATG+AGG | 0.560789 | 3:-80129854 | None:intergenic |
TGGCCACACAAATGTAGAAA+CGG | 0.561072 | 3:-80130029 | MsaT014910.1:CDS |
TGACCGTTTCTACATTTGTG+TGG | 0.593761 | 3:+80130026 | None:intergenic |
CAGGTCCCACCCCAAAACAA+TGG | 0.630259 | 3:-80129986 | MsaT014910.1:CDS |
GAGCAACATATGCACCACAA+AGG | 0.640810 | 3:+80130089 | None:intergenic |
GCTCTAATTATATTCTCACA+TGG | 0.659782 | 3:-80130070 | MsaT014910.1:CDS |
TCGAGTCGAATGAAAACTCG+AGG | 0.674187 | 3:-80130217 | MsaT014910.1:CDS |
CTGGCTCAAACTCATTACAA+CGG | 0.719918 | 3:+80129867 | None:intergenic |
TGGCATCTTGCAATTCATCG+AGG | 0.757727 | 3:-80129966 | MsaT014910.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 80129856 | 80130242 | 80129856 | ID=MsaG014910 |
Chr3 | mRNA | 80129856 | 80130242 | 80129856 | ID=MsaT014910.1;Parent=MsaG014910 |
Chr3 | exon | 80129856 | 80130242 | 80129856 | ID=MsaT014910.1.exon1;Parent=MsaT014910.1 |
Chr3 | CDS | 80129856 | 80130242 | 80129856 | ID=cds.MsaT014910.1;Parent=MsaT014910.1 |
Gene Sequence |
Protein sequence |