Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015116 | KEH34821.1 | 86.029 | 272 | 24 | 1 | 1 | 272 | 169 | 426 | 1.14e-162 | 468 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015116 | sp|Q9C562|CIPKA_ARATH | 48.592 | 284 | 128 | 3 | 2 | 271 | 172 | 451 | 6.76e-89 | 275 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015116 | tr|A0A072UZG3|A0A072UZG3_MEDTR | 86.029 | 272 | 24 | 1 | 1 | 272 | 169 | 426 | 5.44e-163 | 468 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015116 | MtrunA17_Chr3g0114511 | 82.784 | 273 | 31 | 1 | 1 | 273 | 189 | 445 | 9.95e-160 | 451 |
MsaG015116 | MtrunA17_Chr1g0205421 | 67.986 | 278 | 86 | 2 | 1 | 276 | 171 | 447 | 1.14e-123 | 360 |
MsaG015116 | MtrunA17_Chr4g0013131 | 50.554 | 271 | 127 | 3 | 2 | 271 | 172 | 436 | 1.61e-86 | 265 |
MsaG015116 | MtrunA17_Chr5g0432471 | 48.097 | 289 | 128 | 4 | 2 | 270 | 172 | 458 | 2.23e-85 | 263 |
MsaG015116 | MtrunA17_Chr7g0244521 | 51.301 | 269 | 125 | 5 | 2 | 267 | 172 | 437 | 3.11e-85 | 262 |
MsaG015116 | MtrunA17_Chr3g0107011 | 51.311 | 267 | 127 | 2 | 2 | 267 | 174 | 438 | 6.35e-84 | 259 |
MsaG015116 | MtrunA17_Chr2g0284031 | 41.549 | 284 | 139 | 5 | 1 | 264 | 190 | 466 | 7.33e-70 | 224 |
MsaG015116 | MtrunA17_Chr2g0284011 | 43.590 | 273 | 145 | 6 | 2 | 269 | 172 | 440 | 1.44e-69 | 221 |
MsaG015116 | MtrunA17_Chr2g0304111 | 42.751 | 269 | 141 | 5 | 2 | 265 | 184 | 444 | 1.13e-65 | 211 |
MsaG015116 | MtrunA17_Chr1g0150321 | 43.704 | 270 | 132 | 5 | 2 | 270 | 173 | 423 | 1.23e-64 | 208 |
MsaG015116 | MtrunA17_Chr8g0346081 | 41.729 | 266 | 143 | 5 | 2 | 265 | 176 | 431 | 4.37e-64 | 207 |
MsaG015116 | MtrunA17_Chr8g0379091 | 38.621 | 290 | 147 | 4 | 1 | 264 | 185 | 469 | 5.70e-63 | 206 |
MsaG015116 | MtrunA17_Chr5g0441011 | 39.852 | 271 | 151 | 6 | 2 | 270 | 174 | 434 | 2.80e-62 | 202 |
MsaG015116 | MtrunA17_Chr4g0001331 | 39.286 | 280 | 157 | 7 | 2 | 274 | 180 | 453 | 8.69e-61 | 199 |
MsaG015116 | MtrunA17_Chr8g0346071 | 41.132 | 265 | 145 | 5 | 2 | 265 | 176 | 430 | 1.78e-60 | 197 |
MsaG015116 | MtrunA17_Chr4g0063881 | 35.581 | 267 | 162 | 5 | 2 | 265 | 170 | 429 | 3.11e-56 | 187 |
MsaG015116 | MtrunA17_Chr2g0333821 | 37.091 | 275 | 163 | 4 | 2 | 270 | 174 | 444 | 6.32e-56 | 186 |
MsaG015116 | MtrunA17_Chr5g0428031 | 37.970 | 266 | 157 | 4 | 2 | 265 | 168 | 427 | 5.28e-55 | 183 |
MsaG015116 | MtrunA17_Chr4g0069301 | 35.827 | 254 | 156 | 3 | 2 | 254 | 187 | 434 | 1.74e-51 | 174 |
MsaG015116 | MtrunA17_Chr2g0302431 | 35.178 | 253 | 158 | 4 | 2 | 253 | 181 | 428 | 6.00e-50 | 171 |
MsaG015116 | MtrunA17_Chr5g0432491 | 33.214 | 280 | 152 | 5 | 1 | 274 | 183 | 433 | 1.11e-48 | 167 |
MsaG015116 | MtrunA17_Chr3g0107051 | 34.572 | 269 | 136 | 6 | 1 | 260 | 180 | 417 | 3.39e-44 | 155 |
MsaG015116 | MtrunA17_Chr7g0244561 | 34.340 | 265 | 143 | 8 | 1 | 263 | 177 | 412 | 1.99e-40 | 144 |
MsaG015116 | MtrunA17_Chr1g0188031 | 33.214 | 280 | 149 | 8 | 2 | 271 | 182 | 433 | 4.80e-40 | 144 |
MsaG015116 | MtrunA17_Chr1g0166101 | 39.080 | 174 | 65 | 3 | 2 | 164 | 185 | 328 | 2.16e-32 | 123 |
MsaG015116 | MtrunA17_Chr3g0091291 | 53.390 | 118 | 34 | 1 | 1 | 118 | 118 | 214 | 3.49e-31 | 115 |
MsaG015116 | MtrunA17_Chr3g0091281 | 77.273 | 66 | 15 | 0 | 1 | 66 | 170 | 235 | 1.22e-30 | 114 |
MsaG015116 | MtrunA17_Chr3g0091421 | 75.758 | 66 | 16 | 0 | 1 | 66 | 170 | 235 | 3.51e-29 | 110 |
MsaG015116 | MtrunA17_Chr4g0072831 | 50.000 | 86 | 43 | 0 | 12 | 97 | 139 | 224 | 1.56e-24 | 100 |
MsaG015116 | MtrunA17_Chr5g0399911 | 42.735 | 117 | 61 | 2 | 3 | 113 | 176 | 292 | 5.91e-22 | 93.6 |
MsaG015116 | MtrunA17_Chr3g0132671 | 39.394 | 99 | 60 | 0 | 2 | 100 | 207 | 305 | 2.40e-21 | 93.2 |
MsaG015116 | MtrunA17_Chr8g0380661 | 36.111 | 144 | 86 | 2 | 1 | 138 | 156 | 299 | 3.36e-21 | 91.3 |
MsaG015116 | MtrunA17_Chr6g0453681 | 32.597 | 181 | 95 | 4 | 2 | 157 | 177 | 355 | 5.44e-21 | 92.0 |
MsaG015116 | MtrunA17_Chr6g0468751 | 32.778 | 180 | 94 | 4 | 2 | 156 | 177 | 354 | 1.11e-20 | 91.3 |
MsaG015116 | MtrunA17_Chr2g0277501 | 38.686 | 137 | 78 | 2 | 3 | 133 | 161 | 297 | 1.25e-20 | 90.1 |
MsaG015116 | MtrunA17_Chr8g0381821 | 37.778 | 135 | 73 | 3 | 3 | 126 | 161 | 295 | 1.72e-20 | 89.4 |
MsaG015116 | MtrunA17_Chr4g0074111 | 40.650 | 123 | 72 | 1 | 144 | 266 | 263 | 384 | 2.52e-20 | 89.7 |
MsaG015116 | MtrunA17_Chr4g0074111 | 61.538 | 52 | 20 | 0 | 2 | 53 | 178 | 229 | 1.92e-15 | 75.5 |
MsaG015116 | MtrunA17_Chr4g0055451 | 40.351 | 114 | 62 | 2 | 3 | 110 | 162 | 275 | 3.21e-20 | 88.6 |
MsaG015116 | MtrunA17_Chr5g0426521 | 44.860 | 107 | 53 | 2 | 3 | 103 | 161 | 267 | 9.13e-20 | 87.4 |
MsaG015116 | MtrunA17_Chr8g0385281 | 44.860 | 107 | 53 | 2 | 3 | 103 | 162 | 268 | 9.70e-20 | 87.4 |
MsaG015116 | MtrunA17_Chr1g0162301 | 42.202 | 109 | 57 | 2 | 3 | 105 | 181 | 289 | 1.05e-19 | 87.4 |
MsaG015116 | MtrunA17_Chr3g0131061 | 44.860 | 107 | 53 | 2 | 3 | 103 | 161 | 267 | 1.11e-19 | 87.4 |
MsaG015116 | MtrunA17_Chr3g0123791 | 42.727 | 110 | 57 | 2 | 3 | 106 | 162 | 271 | 1.83e-19 | 86.7 |
MsaG015116 | MtrunA17_Chr6g0453671 | 38.542 | 96 | 59 | 0 | 2 | 97 | 177 | 272 | 1.84e-19 | 87.0 |
MsaG015116 | MtrunA17_Chr3g0091411 | 63.077 | 65 | 5 | 1 | 1 | 65 | 118 | 163 | 4.84e-19 | 84.0 |
MsaG015116 | MtrunA17_Chr2g0284021 | 40.000 | 120 | 69 | 3 | 142 | 260 | 14 | 131 | 6.41e-19 | 80.9 |
MsaG015116 | MtrunA17_Chr4g0045371 | 31.429 | 175 | 114 | 2 | 3 | 171 | 180 | 354 | 7.94e-19 | 85.1 |
MsaG015116 | MtrunA17_Chr5g0402661 | 40.367 | 109 | 59 | 2 | 3 | 105 | 175 | 283 | 2.05e-18 | 84.0 |
MsaG015116 | MtrunA17_Chr8g0374571 | 42.308 | 104 | 54 | 2 | 3 | 100 | 180 | 283 | 8.08e-18 | 82.4 |
MsaG015116 | MtrunA17_Chr4g0055431 | 38.596 | 114 | 64 | 2 | 3 | 110 | 168 | 281 | 4.51e-17 | 79.7 |
MsaG015116 | MtrunA17_Chr3g0091311 | 56.716 | 67 | 7 | 2 | 1 | 66 | 170 | 215 | 3.02e-14 | 70.9 |
MsaG015116 | MtrunA17_Chr4g0074811 | 28.426 | 197 | 104 | 8 | 1 | 191 | 252 | 417 | 1.98e-13 | 70.1 |
MsaG015116 | MtrunA17_Chr4g0059751 | 30.400 | 125 | 77 | 3 | 1 | 116 | 253 | 376 | 1.20e-12 | 67.4 |
MsaG015116 | MtrunA17_Chr1g0190131 | 33.663 | 101 | 62 | 2 | 3 | 99 | 168 | 267 | 1.33e-12 | 66.2 |
MsaG015116 | MtrunA17_Chr2g0326531 | 30.108 | 93 | 65 | 0 | 3 | 95 | 287 | 379 | 1.51e-12 | 67.0 |
MsaG015116 | MtrunA17_Chr1g0170551 | 33.333 | 96 | 63 | 1 | 3 | 98 | 165 | 259 | 1.80e-12 | 67.4 |
MsaG015116 | MtrunA17_Chr7g0245031 | 33.333 | 102 | 62 | 2 | 1 | 97 | 305 | 405 | 4.35e-12 | 65.9 |
MsaG015116 | MtrunA17_Chr3g0131181 | 35.354 | 99 | 58 | 4 | 1 | 95 | 190 | 286 | 1.36e-11 | 64.3 |
MsaG015116 | MtrunA17_Chr1g0176421 | 33.981 | 103 | 62 | 4 | 1 | 99 | 322 | 422 | 1.69e-11 | 64.3 |
MsaG015116 | MtrunA17_Chr4g0029241 | 29.032 | 93 | 66 | 0 | 3 | 95 | 285 | 377 | 1.70e-11 | 63.9 |
MsaG015116 | MtrunA17_Chr5g0424501 | 34.343 | 99 | 61 | 3 | 3 | 98 | 350 | 447 | 2.89e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015116 | AT5G58380.1 | 48.592 | 284 | 128 | 3 | 2 | 271 | 172 | 451 | 6.87e-90 | 275 |
MsaG015116 | AT5G07070.1 | 47.653 | 277 | 129 | 4 | 2 | 271 | 172 | 439 | 1.39e-80 | 250 |
MsaG015116 | AT5G45820.1 | 46.014 | 276 | 119 | 4 | 2 | 269 | 172 | 425 | 4.08e-75 | 236 |
MsaG015116 | AT4G30960.1 | 44.737 | 266 | 134 | 3 | 2 | 266 | 184 | 437 | 1.40e-72 | 229 |
MsaG015116 | AT4G18700.1 | 43.682 | 277 | 138 | 6 | 1 | 264 | 185 | 456 | 8.09e-71 | 226 |
MsaG015116 | AT1G30270.3 | 41.667 | 276 | 148 | 5 | 2 | 272 | 95 | 362 | 1.85e-69 | 219 |
MsaG015116 | AT1G30270.1 | 41.667 | 276 | 148 | 5 | 2 | 272 | 192 | 459 | 1.48e-68 | 220 |
MsaG015116 | AT5G01810.1 | 44.569 | 267 | 131 | 3 | 2 | 268 | 172 | 421 | 1.74e-68 | 218 |
MsaG015116 | AT5G01810.2 | 44.569 | 267 | 131 | 3 | 2 | 268 | 172 | 421 | 1.74e-68 | 218 |
MsaG015116 | AT1G30270.2 | 41.667 | 276 | 148 | 5 | 2 | 272 | 192 | 459 | 1.90e-68 | 219 |
MsaG015116 | AT5G25110.1 | 42.545 | 275 | 148 | 6 | 2 | 274 | 203 | 469 | 2.19e-68 | 220 |
MsaG015116 | AT5G10930.1 | 40.794 | 277 | 155 | 5 | 2 | 276 | 173 | 442 | 3.79e-68 | 218 |
MsaG015116 | AT5G45810.1 | 40.288 | 278 | 147 | 4 | 1 | 263 | 187 | 460 | 6.68e-66 | 213 |
MsaG015116 | AT1G29230.1 | 42.545 | 275 | 143 | 4 | 1 | 264 | 233 | 503 | 6.91e-66 | 214 |
MsaG015116 | AT1G01140.1 | 42.045 | 264 | 146 | 4 | 2 | 265 | 180 | 436 | 2.02e-64 | 208 |
MsaG015116 | AT1G01140.3 | 41.199 | 267 | 148 | 4 | 2 | 265 | 180 | 440 | 8.93e-64 | 207 |
MsaG015116 | AT1G01140.2 | 41.353 | 266 | 147 | 5 | 2 | 265 | 180 | 438 | 1.12e-62 | 204 |
MsaG015116 | AT2G25090.1 | 40.959 | 271 | 150 | 4 | 2 | 270 | 184 | 446 | 4.09e-60 | 197 |
MsaG015116 | AT2G26980.3 | 39.852 | 271 | 155 | 6 | 2 | 272 | 175 | 437 | 6.84e-60 | 196 |
MsaG015116 | AT2G26980.4 | 39.852 | 271 | 155 | 6 | 2 | 272 | 185 | 447 | 6.89e-60 | 197 |
MsaG015116 | AT5G21326.1 | 40.602 | 266 | 146 | 7 | 2 | 265 | 174 | 429 | 9.48e-60 | 196 |
MsaG015116 | AT2G34180.1 | 38.710 | 279 | 145 | 5 | 1 | 264 | 216 | 483 | 2.82e-59 | 196 |
MsaG015116 | AT5G35410.1 | 38.519 | 270 | 150 | 7 | 2 | 265 | 170 | 429 | 2.92e-57 | 190 |
MsaG015116 | AT4G24400.1 | 36.842 | 266 | 159 | 5 | 2 | 265 | 168 | 426 | 6.02e-51 | 173 |
MsaG015116 | AT2G26980.5 | 38.115 | 244 | 139 | 6 | 2 | 245 | 175 | 406 | 7.73e-48 | 164 |
MsaG015116 | AT5G35410.2 | 40.887 | 203 | 106 | 5 | 2 | 198 | 170 | 364 | 8.03e-45 | 155 |
MsaG015116 | AT2G26980.1 | 40.099 | 202 | 115 | 4 | 2 | 203 | 175 | 370 | 1.98e-44 | 154 |
MsaG015116 | AT3G17510.2 | 34.661 | 251 | 157 | 4 | 2 | 251 | 101 | 345 | 1.59e-43 | 152 |
MsaG015116 | AT1G48260.2 | 32.677 | 254 | 155 | 4 | 2 | 251 | 87 | 328 | 2.25e-43 | 151 |
MsaG015116 | AT1G48260.4 | 32.677 | 254 | 155 | 4 | 2 | 251 | 87 | 328 | 2.25e-43 | 151 |
MsaG015116 | AT1G48260.3 | 32.677 | 254 | 155 | 4 | 2 | 251 | 87 | 328 | 2.25e-43 | 151 |
MsaG015116 | AT1G48260.5 | 32.677 | 254 | 155 | 4 | 2 | 251 | 87 | 328 | 2.25e-43 | 151 |
MsaG015116 | AT3G17510.1 | 34.661 | 251 | 157 | 4 | 2 | 251 | 181 | 425 | 7.28e-43 | 152 |
MsaG015116 | AT1G48260.1 | 32.677 | 254 | 155 | 4 | 2 | 251 | 172 | 413 | 1.10e-42 | 151 |
MsaG015116 | AT2G30360.1 | 35.060 | 251 | 143 | 3 | 1 | 251 | 182 | 412 | 1.37e-42 | 151 |
MsaG015116 | AT5G01810.3 | 64.646 | 99 | 35 | 0 | 2 | 100 | 172 | 270 | 8.80e-41 | 145 |
MsaG015116 | AT5G01810.3 | 34.375 | 96 | 58 | 1 | 173 | 268 | 286 | 376 | 1.84e-11 | 64.3 |
MsaG015116 | AT4G24400.2 | 37.198 | 207 | 123 | 3 | 2 | 206 | 168 | 369 | 7.79e-40 | 143 |
MsaG015116 | AT5G57630.3 | 34.118 | 255 | 137 | 5 | 2 | 248 | 81 | 312 | 9.40e-40 | 141 |
MsaG015116 | AT4G14580.1 | 37.811 | 201 | 102 | 4 | 2 | 201 | 183 | 361 | 1.25e-39 | 143 |
MsaG015116 | AT5G57630.2 | 33.721 | 258 | 140 | 5 | 2 | 251 | 169 | 403 | 2.36e-39 | 142 |
MsaG015116 | AT3G23000.1 | 39.899 | 198 | 91 | 6 | 2 | 199 | 186 | 355 | 2.44e-39 | 142 |
MsaG015116 | AT5G57630.1 | 34.118 | 255 | 137 | 5 | 2 | 248 | 169 | 400 | 5.08e-39 | 141 |
MsaG015116 | AT5G01820.1 | 33.208 | 265 | 156 | 5 | 1 | 264 | 181 | 425 | 5.31e-38 | 139 |
MsaG015116 | AT2G38490.1 | 39.810 | 211 | 102 | 5 | 1 | 210 | 187 | 373 | 5.85e-36 | 133 |
MsaG015116 | AT5G21222.1 | 47.368 | 114 | 59 | 1 | 2 | 115 | 174 | 286 | 1.52e-30 | 120 |
MsaG015116 | AT5G21222.2 | 47.368 | 114 | 59 | 1 | 2 | 115 | 174 | 286 | 1.52e-30 | 120 |
MsaG015116 | AT5G21222.4 | 47.368 | 114 | 59 | 1 | 2 | 115 | 174 | 286 | 1.52e-30 | 120 |
MsaG015116 | AT5G21222.3 | 47.368 | 114 | 59 | 1 | 2 | 115 | 174 | 286 | 1.52e-30 | 120 |
MsaG015116 | AT2G26980.2 | 57.500 | 80 | 34 | 0 | 2 | 81 | 175 | 254 | 1.16e-29 | 113 |
MsaG015116 | AT3G29160.3 | 44.444 | 99 | 55 | 0 | 2 | 100 | 178 | 276 | 2.42e-23 | 98.2 |
MsaG015116 | AT3G29160.1 | 44.444 | 99 | 55 | 0 | 2 | 100 | 178 | 276 | 8.97e-23 | 97.8 |
MsaG015116 | AT3G29160.2 | 44.444 | 99 | 55 | 0 | 2 | 100 | 178 | 276 | 8.97e-23 | 97.8 |
MsaG015116 | AT1G78290.3 | 46.729 | 107 | 51 | 2 | 3 | 103 | 161 | 267 | 4.26e-21 | 91.7 |
MsaG015116 | AT1G78290.2 | 46.729 | 107 | 51 | 2 | 3 | 103 | 161 | 267 | 4.26e-21 | 91.7 |
MsaG015116 | AT3G01090.3 | 41.414 | 99 | 58 | 0 | 2 | 100 | 177 | 275 | 1.40e-20 | 91.3 |
MsaG015116 | AT3G01090.1 | 41.414 | 99 | 58 | 0 | 2 | 100 | 177 | 275 | 1.40e-20 | 91.3 |
MsaG015116 | AT3G01090.2 | 41.414 | 99 | 58 | 0 | 2 | 100 | 200 | 298 | 1.41e-20 | 91.7 |
MsaG015116 | AT4G33950.2 | 34.756 | 164 | 101 | 3 | 3 | 160 | 178 | 341 | 2.77e-20 | 89.4 |
MsaG015116 | AT1G10940.1 | 42.857 | 119 | 55 | 3 | 3 | 115 | 161 | 272 | 4.12e-20 | 89.0 |
MsaG015116 | AT1G10940.2 | 42.857 | 119 | 55 | 3 | 3 | 115 | 169 | 280 | 4.47e-20 | 89.0 |
MsaG015116 | AT5G39440.1 | 34.899 | 149 | 77 | 3 | 2 | 131 | 177 | 324 | 4.54e-20 | 89.7 |
MsaG015116 | AT4G33950.1 | 35.802 | 162 | 98 | 3 | 3 | 158 | 178 | 339 | 4.73e-20 | 89.0 |
MsaG015116 | AT4G40010.1 | 45.631 | 103 | 50 | 2 | 3 | 99 | 161 | 263 | 8.68e-20 | 88.2 |
MsaG015116 | AT1G60940.1 | 41.176 | 119 | 57 | 3 | 3 | 115 | 161 | 272 | 3.49e-19 | 86.7 |
MsaG015116 | AT1G60940.2 | 41.176 | 119 | 57 | 3 | 3 | 115 | 161 | 272 | 3.49e-19 | 86.7 |
MsaG015116 | AT5G08590.2 | 43.925 | 107 | 54 | 2 | 3 | 103 | 85 | 191 | 7.27e-19 | 84.3 |
MsaG015116 | AT5G63650.1 | 42.991 | 107 | 55 | 2 | 3 | 103 | 161 | 267 | 9.32e-19 | 85.1 |
MsaG015116 | AT5G08590.1 | 43.925 | 107 | 54 | 2 | 3 | 103 | 161 | 267 | 1.14e-18 | 85.1 |
MsaG015116 | AT3G50500.1 | 42.308 | 104 | 54 | 2 | 3 | 100 | 180 | 283 | 1.77e-17 | 81.6 |
MsaG015116 | AT3G50500.2 | 42.308 | 104 | 54 | 2 | 3 | 100 | 187 | 290 | 1.77e-17 | 81.6 |
MsaG015116 | AT5G66880.1 | 42.991 | 107 | 55 | 2 | 3 | 103 | 179 | 285 | 1.00e-16 | 79.3 |
MsaG015116 | AT5G66880.2 | 42.991 | 107 | 55 | 2 | 3 | 103 | 179 | 285 | 1.00e-16 | 79.3 |
MsaG015116 | AT2G23030.1 | 40.187 | 107 | 58 | 2 | 3 | 103 | 161 | 267 | 1.71e-16 | 78.6 |
MsaG015116 | AT4G04695.1 | 33.019 | 106 | 65 | 2 | 2 | 103 | 194 | 297 | 6.87e-14 | 71.6 |
MsaG015116 | AT4G21940.1 | 35.922 | 103 | 60 | 4 | 1 | 99 | 263 | 363 | 8.60e-13 | 68.6 |
MsaG015116 | AT4G21940.3 | 35.922 | 103 | 60 | 4 | 1 | 99 | 263 | 363 | 8.93e-13 | 68.6 |
MsaG015116 | AT4G21940.2 | 35.922 | 103 | 60 | 4 | 1 | 99 | 263 | 363 | 1.02e-12 | 68.2 |
MsaG015116 | AT4G04720.2 | 34.951 | 103 | 61 | 4 | 1 | 99 | 241 | 341 | 1.58e-12 | 67.8 |
MsaG015116 | AT4G04720.1 | 34.951 | 103 | 61 | 4 | 1 | 99 | 241 | 341 | 1.58e-12 | 67.8 |
MsaG015116 | AT1G08650.1 | 32.381 | 105 | 66 | 2 | 3 | 103 | 177 | 280 | 1.82e-12 | 66.6 |
MsaG015116 | AT3G45240.3 | 31.183 | 93 | 64 | 0 | 3 | 95 | 273 | 365 | 2.73e-12 | 66.6 |
MsaG015116 | AT3G45240.2 | 31.183 | 93 | 64 | 0 | 3 | 95 | 276 | 368 | 2.76e-12 | 66.6 |
MsaG015116 | AT3G45240.1 | 31.183 | 93 | 64 | 0 | 3 | 95 | 276 | 368 | 2.76e-12 | 66.6 |
MsaG015116 | AT4G04700.1 | 33.645 | 107 | 65 | 3 | 1 | 103 | 193 | 297 | 5.96e-12 | 65.9 |
MsaG015116 | AT1G08650.2 | 46.667 | 60 | 31 | 1 | 3 | 62 | 177 | 235 | 2.30e-11 | 63.2 |
MsaG015116 | AT5G23580.1 | 35.354 | 99 | 58 | 4 | 1 | 95 | 183 | 279 | 3.66e-11 | 63.5 |
MsaG015116 | AT5G60550.1 | 31.579 | 95 | 63 | 1 | 3 | 95 | 275 | 369 | 5.93e-11 | 62.8 |
Find 52 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAAAGCATTAAGATATTT+TGG | 0.167939 | 3:+82862902 | None:intergenic |
GTTTGCTCCATCTTTCTATT+TGG | 0.206388 | 3:-82862639 | MsaT015116.1:CDS |
ATTAAATTCTGATCATAAAA+TGG | 0.213112 | 3:+82863202 | None:intergenic |
GCAGTAGATATTCTACTATC+AGG | 0.236730 | 3:+82863082 | None:intergenic |
AGTAATCTTATTTGTTCTTT+TGG | 0.251599 | 3:-82863236 | MsaT015116.1:CDS |
GGTTGAACCAATTCTTGATT+TGG | 0.270025 | 3:+82862923 | None:intergenic |
CTCATACTTTCTCTATCTGC+AGG | 0.340896 | 3:-82862881 | MsaT015116.1:CDS |
AATATCTACTGCTAAAATAA+TGG | 0.359036 | 3:-82863071 | MsaT015116.1:CDS |
ATGAAGATAGTAAAGAATAA+TGG | 0.397794 | 3:-82862734 | MsaT015116.1:CDS |
TGTTGAGCCAAATCAAGAAT+TGG | 0.401904 | 3:-82862930 | MsaT015116.1:CDS |
TATGCTCCTTCAATATCTTC+TGG | 0.442808 | 3:+82862579 | None:intergenic |
GTTCAGAAAAGGATTACATT+CGG | 0.444489 | 3:-82863038 | MsaT015116.1:CDS |
GATAGAGGAGGCCGAGCTCT+TGG | 0.445285 | 3:+82862793 | None:intergenic |
TAATGGAGAGATGCTAAGGT+TGG | 0.459845 | 3:-82862717 | MsaT015116.1:CDS |
GAAAGTCGTTGGTTCAGAAA+AGG | 0.460511 | 3:-82863049 | MsaT015116.1:CDS |
CCAGATGTTCTCCGTGGAAA+AGG | 0.462288 | 3:-82863295 | MsaT015116.1:CDS |
CAGCTCTCAAAGATATTGTC+TGG | 0.464757 | 3:-82862550 | MsaT015116.1:CDS |
GATATTCTACTATCAGGGTT+GGG | 0.476519 | 3:+82863088 | None:intergenic |
CTCCATTGTTGATATGATAG+AGG | 0.477501 | 3:+82862778 | None:intergenic |
AGATATTCTACTATCAGGGT+TGG | 0.503131 | 3:+82863087 | None:intergenic |
AAAGCTGATGTTTGGTCTTG+CGG | 0.503864 | 3:-82863259 | MsaT015116.1:CDS |
GACATTTGTATTCTCCCTTG+TGG | 0.506310 | 3:+82863161 | None:intergenic |
ATCTCAACCAAATAGAAAGA+TGG | 0.512205 | 3:+82862632 | None:intergenic |
TCAAAGATATTGTCTGGACT+TGG | 0.516426 | 3:-82862544 | MsaT015116.1:CDS |
CTAAAATAATGGAAAGTCGT+TGG | 0.517221 | 3:-82863060 | MsaT015116.1:CDS |
CAAATTTACCTCCAAGAGCT+CGG | 0.530045 | 3:-82862804 | MsaT015116.1:CDS |
TCATACTTTCTCTATCTGCA+GGG | 0.532362 | 3:-82862880 | MsaT015116.1:CDS |
ATCATAAAATGGATAGTGAC+GGG | 0.534890 | 3:+82863213 | None:intergenic |
AGAATAATGGAGAGATGCTA+AGG | 0.534962 | 3:-82862721 | MsaT015116.1:CDS |
AGAATTTAATGGAAATGTAT+CGG | 0.536030 | 3:-82863189 | MsaT015116.1:CDS |
CAGTAGATATTCTACTATCA+GGG | 0.557568 | 3:+82863083 | None:intergenic |
GGAATACCAGAAGATATTGA+AGG | 0.561904 | 3:-82862585 | MsaT015116.1:CDS |
CAGACAATATCTTTGAGAGC+TGG | 0.562085 | 3:+82862551 | None:intergenic |
GTTGAGATAAAGAAGTACAG+TGG | 0.563469 | 3:-82862617 | MsaT015116.1:CDS |
GAAGTACAGTGGAGATGCAT+CGG | 0.565013 | 3:-82862606 | MsaT015116.1:CDS |
GGAGGAACTTGCGCACATGT+TGG | 0.577408 | 3:-82862759 | MsaT015116.1:CDS |
AGAAAGAGAGATTACAAATG+TGG | 0.581707 | 3:-82863002 | MsaT015116.1:CDS |
ATCTCGACTGAAAACCAGTC+GGG | 0.583287 | 3:+82863139 | None:intergenic |
GATCATAAAATGGATAGTGA+CGG | 0.589968 | 3:+82863212 | None:intergenic |
CTCCTCTATCATATCAACAA+TGG | 0.598803 | 3:-82862780 | MsaT015116.1:CDS |
AGAGGAGGCCGAGCTCTTGG+AGG | 0.601187 | 3:+82862796 | None:intergenic |
CTCCGTGGAAAAGGTTATTG+TGG | 0.606331 | 3:-82863286 | MsaT015116.1:CDS |
GGTTATTGACAAAGAATGTG+TGG | 0.610058 | 3:-82863337 | None:intergenic |
GAGAATACAAATGTCCCGAC+TGG | 0.612592 | 3:-82863153 | MsaT015116.1:CDS |
CTCTATCATATCAACAATGG+AGG | 0.623881 | 3:-82862777 | MsaT015116.1:CDS |
ACATCTGGAGCTACATACAT+CGG | 0.669824 | 3:+82863310 | None:intergenic |
CATTGTTGATATGATAGAGG+AGG | 0.682954 | 3:+82862781 | None:intergenic |
TATCTCGACTGAAAACCAGT+CGG | 0.692293 | 3:+82863138 | None:intergenic |
AATGTATCGGAAAATCCACA+AGG | 0.714526 | 3:-82863176 | MsaT015116.1:CDS |
GTAGCTCCAGATGTTCTCCG+TGG | 0.717483 | 3:-82863301 | MsaT015116.1:CDS |
ATGTATCGGAAAATCCACAA+GGG | 0.746504 | 3:-82863175 | MsaT015116.1:CDS |
ATTTCAGTAGAAATACTGAG+TGG | 0.747310 | 3:+82862668 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 82862514 | 82863344 | 82862514 | ID=MsaG015116 |
Chr3 | mRNA | 82862514 | 82863344 | 82862514 | ID=MsaT015116.1;Parent=MsaG015116 |
Chr3 | exon | 82862514 | 82863344 | 82862514 | ID=MsaT015116.1.exon1;Parent=MsaT015116.1 |
Chr3 | CDS | 82862514 | 82863344 | 82862514 | ID=cds.MsaT015116.1;Parent=MsaT015116.1 |
Gene Sequence |
Protein sequence |