AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG015269


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG015269 MtrunA17_Chr3g0116171 97.778 810 18 0 1 810 58 867 0.0 1630
MsaG015269 MtrunA17_Chr4g0057731 86.762 627 79 2 1 627 62 684 0.0 1132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG015269 AT5G63420.1 72.563 831 197 7 1 809 90 911 0.0 1195

Find 182 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAAAGATGCAAGATTTA+AGG 0.149877 3:+84862606 None:intergenic
GCCTTAAATCTTGCATCTTT+TGG 0.181875 3:-84862607 MsaT015269.1:CDS
TTGGCTGGAAACACCTTAAA+AGG 0.186376 3:-84861129 MsaT015269.1:CDS
TATTTGTTGGCATGTCTTTA+AGG 0.202740 3:-84863676 MsaT015269.1:CDS
CAGGGGAATCGGATGAATTT+TGG 0.207468 3:-84859971 MsaT015269.1:CDS
CAAATCTTTGTGGACATCTT+TGG 0.240355 3:-84859625 MsaT015269.1:CDS
ATCCATGGATGAACATAAAA+AGG 0.267555 3:-84860815 MsaT015269.1:CDS
GATTCACTGGTTGTCCTTCC+AGG 0.285382 3:+84863934 None:intergenic
CAAGTGATTCATGCTCCTTC+AGG 0.286343 3:+84861681 None:intergenic
TTTCTTATAAATGTTGTATC+AGG 0.286634 3:+84866298 None:intergenic
CCATTACGTGTTCTTCCTAT+TGG 0.296621 3:-84866725 MsaT015269.1:CDS
GAAGGCGATTTATCTGATTC+AGG 0.300145 3:-84859990 MsaT015269.1:CDS
AAAGCTGCTGCCGATTTAAC+TGG 0.300725 3:-84863814 MsaT015269.1:CDS
ATACAACATTTATAAGAAAA+TGG 0.305949 3:-84866294 MsaT015269.1:CDS
CCTTGGAAAAGAAAATTTAC+AGG 0.307438 3:-84861448 MsaT015269.1:intron
ATTGGTGGTCTGGGTGAAAT+TGG 0.323414 3:-84866707 MsaT015269.1:CDS
TGTTCTTCCTATTGGTGGTC+TGG 0.325452 3:-84866717 MsaT015269.1:CDS
GATGTAGATTTGATGCAAAC+TGG 0.345615 3:+84863851 None:intergenic
TGAAAGGAAGGATGGCTCTC+TGG 0.354049 3:-84859704 MsaT015269.1:CDS
CTTCTAAATGTTGATATTCC+AGG 0.354594 3:+84860838 None:intergenic
AATAGAAGGGTTCTTTCTAA+TGG 0.365515 3:-84861480 MsaT015269.1:CDS
ATTTCCATTCAATTTGTTGC+CGG 0.369154 3:+84858655 None:intergenic
ATCTTTGGCACTTAAATATG+AGG 0.370175 3:-84859610 MsaT015269.1:intron
ATCATATCGGTGCGTTGCCT+TGG 0.376836 3:-84866228 MsaT015269.1:CDS
TTATTATATCAGGTATTTGT+TGG 0.378839 3:-84863689 MsaT015269.1:intron
ATCGCAATGGCAATTACTTC+GGG 0.381041 3:+84860928 None:intergenic
TTTCACACTTGAGAAATAGA+AGG 0.384172 3:-84861494 MsaT015269.1:CDS
GCATTTATTACCAGAGTTGA+TGG 0.385749 3:+84863608 None:intergenic
ATGCACCAGGTTATTAAGAA+TGG 0.386575 3:-84861531 MsaT015269.1:intron
TTGTTTGCAGTGTGGTGGAC+TGG 0.387215 3:+84860788 None:intergenic
GAATGAATTGTATGCTTGTT+GGG 0.394201 3:-84866685 MsaT015269.1:CDS
CAACTTTCTCCCAGTTAAAT+CGG 0.401807 3:+84863804 None:intergenic
CTAGTTCTTCGTTGTTCTGA+TGG 0.406463 3:-84864773 MsaT015269.1:CDS
TAGATGGCATCATTGTGATT+AGG 0.412496 3:-84861262 MsaT015269.1:intron
AATGAAAACTTACACACATC+TGG 0.415170 3:-84862248 MsaT015269.1:CDS
AGAATGAGAATTGCATTAGA+TGG 0.417290 3:-84861278 MsaT015269.1:CDS
ATTGGATCAACAATAGTTAT+GGG 0.421279 3:-84862275 MsaT015269.1:CDS
GGCAAATCCCACGTTGGTCC+TGG 0.424025 3:-84860856 MsaT015269.1:CDS
GATTGGATCAACAATAGTTA+TGG 0.427638 3:-84862276 MsaT015269.1:CDS
CTATTCTTCACACTGGGGAT+TGG 0.430987 3:-84864748 MsaT015269.1:CDS
ATCACACGGGACTCATTACC+AGG 0.431628 3:+84862323 None:intergenic
GAATTACCACAAGATGTCTA+TGG 0.437596 3:-84861098 MsaT015269.1:CDS
GAGAAAGAGACCACTACAAC+TGG 0.440855 3:-84860017 MsaT015269.1:CDS
CATTTGAGATAGAACCAATC+AGG 0.444198 3:-84864826 MsaT015269.1:CDS
CTGGACAATGCAAATCTTTG+TGG 0.444645 3:-84859635 MsaT015269.1:CDS
ACATGCATATCGTGGAGAAT+TGG 0.445598 3:-84862225 MsaT015269.1:intron
GAATCACTTGGAAAATCAAC+TGG 0.447489 3:-84861668 MsaT015269.1:CDS
TCTAATGGTTTCATTTCCCT+TGG 0.447711 3:-84861465 MsaT015269.1:CDS
TATCGCAATGGCAATTACTT+CGG 0.447759 3:+84860927 None:intergenic
ACCAGAGTTGATGGGTCAAA+TGG 0.450689 3:+84863617 None:intergenic
TTACGTGTTCTTCCTATTGG+TGG 0.451781 3:-84866722 MsaT015269.1:CDS
TCATATCGGTGCGTTGCCTT+GGG 0.452996 3:-84866227 MsaT015269.1:intron
GGAATGAATTGTATGCTTGT+TGG 0.453098 3:-84866686 MsaT015269.1:CDS
GAGATAAACACAAAATTGTC+TGG 0.454789 3:-84860877 MsaT015269.1:CDS
TTTATCTGATTCAGGGGAAT+CGG 0.455159 3:-84859982 MsaT015269.1:CDS
AGTGATGGTGACAAAGCATT+TGG 0.457642 3:-84861329 MsaT015269.1:CDS
ATCAGACATTTCTTCAGACT+TGG 0.457953 3:+84859833 None:intergenic
CTGATTGGTTCTATCTCAAA+TGG 0.459887 3:+84864827 None:intergenic
ATTGACGAGACACCACTTGA+TGG 0.463031 3:-84864638 MsaT015269.1:CDS
GTTACAATAAGCAGATCCTT+AGG 0.463234 3:+84862757 None:intergenic
TCAACTGATGATGCAATGAA+TGG 0.463811 3:+84859945 None:intergenic
GATCTGCTTATTGTAACAAC+TGG 0.465028 3:-84862751 MsaT015269.1:CDS
GTTCTTCCTATTGGTGGTCT+GGG 0.466937 3:-84866716 MsaT015269.1:CDS
TCAACAAATGTGCTCTCACC+TGG 0.467892 3:-84863952 MsaT015269.1:CDS
GATGGGATCAGCAGAAGTCC+TGG 0.469354 3:-84859654 MsaT015269.1:CDS
CCTTGGTAAGTTTGAAAGCA+TGG 0.473674 3:+84862578 None:intergenic
ATGAATCGCATATCAGAGAT+TGG 0.474239 3:-84862293 MsaT015269.1:CDS
TCTAATCAGGAGATCAAGAA+TGG 0.475221 3:-84858745 MsaT015269.1:intron
CGATTTAACTGGGAGAAAGT+TGG 0.476469 3:-84863803 MsaT015269.1:intron
AATCAGCTTCTTGACTTCCT+CGG 0.476513 3:+84859764 None:intergenic
CTCAGAGCTTGTTGGCTGAT+GGG 0.478275 3:-84859671 MsaT015269.1:CDS
CACAAAGATTTGCATTGTCC+AGG 0.480128 3:+84859636 None:intergenic
TCTCAGAGCTTGTTGGCTGA+TGG 0.481622 3:-84859672 MsaT015269.1:CDS
ATAGAATGAGTCACCCTGAT+TGG 0.482517 3:+84864812 None:intergenic
TTGGAAAATCAACTGGCATT+CGG 0.486197 3:-84861661 MsaT015269.1:CDS
TCATCAGGTCATCCCAGCAT+TGG 0.486824 3:-84865255 MsaT015269.1:intron
ATACAAAACAATATCTTCCT+TGG 0.488079 3:+84862561 None:intergenic
TCAAGAAGCTGATTGATTTG+CGG 0.490229 3:-84859755 MsaT015269.1:CDS
CAATTCTCATTCTTTCATCA+AGG 0.490742 3:+84861288 None:intergenic
GACAAAGCATTTGGTACATC+CGG 0.492657 3:-84861320 MsaT015269.1:CDS
ACAAAGAACAAGTTTGTCGC+TGG 0.495185 3:-84864851 MsaT015269.1:CDS
GATGTCTATGGCTGGACAAA+GGG 0.497228 3:-84861086 MsaT015269.1:CDS
AAGGCGATTTATCTGATTCA+GGG 0.497243 3:-84859989 MsaT015269.1:CDS
CAAAAGTCCACTGGCTCACA+TGG 0.497633 3:-84861007 MsaT015269.1:CDS
ATTTCACCCAGACCACCAAT+AGG 0.498470 3:+84866710 None:intergenic
CATTCTATTCCTGACTGTTG+TGG 0.499925 3:-84864797 MsaT015269.1:CDS
ACCTCTTGTTTGCAGTGTGG+TGG 0.502821 3:+84860783 None:intergenic
TTAGAAGCAGCTTGGAAGGA+TGG 0.505273 3:-84863647 MsaT015269.1:CDS
AGGCACATTTCAGCTTCAAA+AGG 0.507331 3:-84863889 MsaT015269.1:CDS
GATTTAAAGTTGTGAAAGGA+AGG 0.508605 3:-84859716 MsaT015269.1:CDS
GAAAGGAAGGATGGCTCTCT+GGG 0.509095 3:-84859703 MsaT015269.1:CDS
ACATTTCAGCTTCAAAAGGA+AGG 0.510397 3:-84863885 MsaT015269.1:CDS
CTGAAGGAGCATGAATCACT+TGG 0.511676 3:-84861680 MsaT015269.1:CDS
CGTTATATCCTCATTGATGC+TGG 0.516389 3:-84866653 MsaT015269.1:CDS
AACAAGTATTCTCCATGTAC+AGG 0.517823 3:+84861704 None:intergenic
TGGCTGGAAACACCTTAAAA+GGG 0.519920 3:-84861128 MsaT015269.1:CDS
AGAGATATCTCAGAGCTTGT+TGG 0.522256 3:-84859679 MsaT015269.1:CDS
TGCATCTTCCTTTACAATGG+AGG 0.526281 3:-84865213 MsaT015269.1:intron
TATTGATGCTTATGCACCTA+AGG 0.528326 3:-84862773 MsaT015269.1:CDS
GACAGATTTAAAGTTGTGAA+AGG 0.528331 3:-84859720 MsaT015269.1:CDS
GCATCAAATCTACATCGGAT+TGG 0.529989 3:-84863844 MsaT015269.1:CDS
TTCATCAAGGAAGAGTTCAC+CGG 0.530019 3:+84861301 None:intergenic
TCAATTTGTCAGGTTATCCC+TGG 0.531224 3:-84862341 MsaT015269.1:intron
CAGCATCAATGAGGATATAA+CGG 0.531872 3:+84866654 None:intergenic
GGACATACTTAGAAGCAGCT+TGG 0.532316 3:-84863655 MsaT015269.1:CDS
ATCAACATTTAGAAGATCCA+TGG 0.532606 3:-84860830 MsaT015269.1:CDS
TTGACGAGACACCACTTGAT+GGG 0.533040 3:-84864637 MsaT015269.1:CDS
TCCATTTGACCCATCAACTC+TGG 0.534282 3:-84863618 MsaT015269.1:intron
AGAACTAGTCCACAACAGTC+AGG 0.535143 3:+84864788 None:intergenic
TACCACAAGATGTCTATGGC+TGG 0.535188 3:-84861094 MsaT015269.1:CDS
TCTTCACACTGGGGATTGGA+AGG 0.536502 3:-84864744 MsaT015269.1:intron
CATGGTCATGAAGATCATAT+CGG 0.538341 3:-84866241 MsaT015269.1:CDS
GGTGTATTGGAATCCAATGC+TGG 0.538955 3:+84865242 None:intergenic
GCCGAATACCTCCATTGTAA+AGG 0.539763 3:+84865205 None:intergenic
TAAAGTTGTGAAAGGAAGGA+TGG 0.540086 3:-84859712 MsaT015269.1:CDS
ATCTGCCACAACAGATTCAC+TGG 0.540628 3:+84863921 None:intergenic
TTGTGGCAGATTCATTATTG+AGG 0.541904 3:-84863909 MsaT015269.1:CDS
AGATTCTGTTCAACGTAGGA+TGG 0.542555 3:-84866777 MsaT015269.1:CDS
ATTAAGAATGGAGAGATGCT+TGG 0.543149 3:-84861519 MsaT015269.1:CDS
ATACTTAGAAGCAGCTTGGA+AGG 0.544162 3:-84863651 MsaT015269.1:CDS
TTAGAGGAACTCTCTAAAGA+AGG 0.550937 3:-84864593 MsaT015269.1:CDS
CAAAGAACAAGTTTGTCGCT+GGG 0.552337 3:-84864850 MsaT015269.1:CDS
CATTTCAGCTTCAAAAGGAA+GGG 0.552543 3:-84863884 MsaT015269.1:CDS
GCCATTGCGATAGAAAATCC+TGG 0.555157 3:-84860916 MsaT015269.1:CDS
CTAATCAGGAGATCAAGAAT+GGG 0.558723 3:-84858744 MsaT015269.1:intron
CTGTCCCGTCAAAAGTCCAC+TGG 0.559295 3:-84861016 MsaT015269.1:CDS
CATTTATTACCAGAGTTGAT+GGG 0.561091 3:+84863609 None:intergenic
GTCGGAGATGTTGAGGAAGA+TGG 0.562067 3:-84860974 MsaT015269.1:CDS
TCACAACTTTAAATCTGTCA+CGG 0.562346 3:+84859724 None:intergenic
AGATGTTGAGGAAGATGGTG+AGG 0.567241 3:-84860969 MsaT015269.1:CDS
TTGGCAATATCTTGAGGACA+TGG 0.567651 3:-84858704 MsaT015269.1:CDS
GAACTGTGTCGGAGATGTTG+AGG 0.569522 3:-84860981 MsaT015269.1:CDS
ATGGAACTATTCTTCACACT+GGG 0.571280 3:-84864754 MsaT015269.1:CDS
GTCCAGCCATAGACATCTTG+TGG 0.573025 3:+84861092 None:intergenic
ACCACTACAACTGGAGCTGA+AGG 0.573383 3:-84860008 MsaT015269.1:CDS
CTCTAAAGAAGGAGTAACAT+TGG 0.574233 3:-84864582 MsaT015269.1:intron
TTCACACTTGAGAAATAGAA+GGG 0.575027 3:-84861493 MsaT015269.1:CDS
AGATGTCTATGGCTGGACAA+AGG 0.582028 3:-84861087 MsaT015269.1:CDS
CAATGGTTATGTTTCACGAA+AGG 0.585188 3:-84859904 MsaT015269.1:CDS
GCCTTCAGCTCCAGTTGTAG+TGG 0.589034 3:+84860007 None:intergenic
GTTCTTTCCATGTGAGCCAG+TGG 0.589970 3:+84861000 None:intergenic
AAGCTGCTGCCGATTTAACT+GGG 0.591068 3:-84863813 MsaT015269.1:CDS
TGGTAATGAGTCCCGTGTGA+TGG 0.593761 3:-84862321 MsaT015269.1:CDS
CCAATAGGAAGAACACGTAA+TGG 0.600542 3:+84866725 None:intergenic
AGCAGCTTGGAAGGATGGAA+AGG 0.602363 3:-84863642 MsaT015269.1:CDS
TCACATGGAAAGAACTGTGT+CGG 0.607611 3:-84860992 MsaT015269.1:CDS
CCATGCTTTCAAACTTACCA+AGG 0.609185 3:-84862578 MsaT015269.1:CDS
GACAACCAGTGAATCTGTTG+TGG 0.610763 3:-84863926 MsaT015269.1:CDS
TCCACCACACTGCAAACAAG+AGG 0.611195 3:-84860784 MsaT015269.1:intron
GTCTGAAGAAATGTCTGATG+CGG 0.611515 3:-84859829 MsaT015269.1:CDS
GATGATGGCATTGACACAGA+AGG 0.613399 3:-84860050 MsaT015269.1:CDS
CAAATGTGCTCTCACCTGGA+AGG 0.615112 3:-84863948 MsaT015269.1:CDS
GATGGAACTATTCTTCACAC+TGG 0.616053 3:-84864755 MsaT015269.1:CDS
AATATCTTGAGGACATGGAA+AGG 0.619122 3:-84858699 MsaT015269.1:CDS
TGGAGAATACTTGTTCCTGA+AGG 0.627983 3:-84861696 MsaT015269.1:CDS
GTTACCTCTTGTTTGCAGTG+TGG 0.633512 3:+84860780 None:intergenic
ATGTAGATTTGATGCAAACT+GGG 0.634137 3:+84863852 None:intergenic
GATTCATCATTTCCATCACA+CGG 0.639799 3:+84862309 None:intergenic
ATTTGAGATAGAACCAATCA+GGG 0.643383 3:-84864825 MsaT015269.1:CDS
ATTCATCATTTCCATCACAC+GGG 0.645095 3:+84862310 None:intergenic
AGGCGATTTATCTGATTCAG+GGG 0.651319 3:-84859988 MsaT015269.1:CDS
ATTGTCTAGTGATGAAACAC+CGG 0.652259 3:-84858674 MsaT015269.1:CDS
GTGTATTGGAATCCAATGCT+GGG 0.657667 3:+84865243 None:intergenic
AAATCAATCAAAGCAAACAA+TGG 0.658404 3:-84859921 MsaT015269.1:CDS
TTGGATCAACAATAGTTATG+GGG 0.659409 3:-84862274 MsaT015269.1:CDS
ACATCTGGACATGCATATCG+TGG 0.659861 3:-84862233 MsaT015269.1:CDS
ACATGATACCAGCATCAATG+AGG 0.660800 3:+84866645 None:intergenic
AGTTTGCATCAAATCTACAT+CGG 0.660918 3:-84863849 MsaT015269.1:CDS
TGGAAGATTCTGTTCAACGT+AGG 0.664297 3:-84866781 MsaT015269.1:CDS
TTGATATTCCAGGACCAACG+TGG 0.664721 3:+84860848 None:intergenic
AAGATGGTGAGGAAGTACAG+TGG 0.672062 3:-84860958 MsaT015269.1:CDS
GAAGCACTTGTTATAACACA+TGG 0.674931 3:-84866259 MsaT015269.1:CDS
TGAGGAAGTACAGTGGTAAG+CGG 0.677242 3:-84860951 MsaT015269.1:CDS
ATGCAGTTGAAATATAGTGA+TGG 0.680617 3:-84861344 MsaT015269.1:intron
GCAAGATTTAAGGCAGCACG+TGG 0.681321 3:+84862616 None:intergenic
TGTACAGGAAGAAAATGTTG+CGG 0.705564 3:+84861719 None:intergenic
TGATATTCCAGGACCAACGT+GGG 0.714591 3:+84860849 None:intergenic
TTGTCTGGCAAATCCCACGT+TGG 0.720381 3:-84860862 MsaT015269.1:CDS
CAACTTTAAATCTGTCACGG+AGG 0.723247 3:+84859727 None:intergenic
ATAGGAAGAACACGTAATGG+CGG 0.726743 3:+84866728 None:intergenic
TCACACGGGACTCATTACCA+GGG 0.727328 3:+84862324 None:intergenic
TGGAACTATTCTTCACACTG+GGG 0.745314 3:-84864753 MsaT015269.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 84858663 84866804 84858663 ID=MsaG015269
Chr3 mRNA 84858663 84866804 84858663 ID=MsaT015269.1;Parent=MsaG015269
Chr3 exon 84858663 84858758 84858663 ID=MsaT015269.1.exon16;Parent=MsaT015269.1
Chr3 CDS 84858663 84858758 84858663 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84859611 84860071 84859611 ID=MsaT015269.1.exon15;Parent=MsaT015269.1
Chr3 CDS 84859611 84860071 84859611 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84860785 84861185 84860785 ID=MsaT015269.1.exon14;Parent=MsaT015269.1
Chr3 CDS 84860785 84861185 84860785 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84861263 84861360 84861263 ID=MsaT015269.1.exon13;Parent=MsaT015269.1
Chr3 CDS 84861263 84861360 84861263 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84861449 84861544 84861449 ID=MsaT015269.1.exon12;Parent=MsaT015269.1
Chr3 CDS 84861449 84861544 84861449 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84861652 84861765 84861652 ID=MsaT015269.1.exon11;Parent=MsaT015269.1
Chr3 CDS 84861652 84861765 84861652 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84862226 84862351 84862226 ID=MsaT015269.1.exon10;Parent=MsaT015269.1
Chr3 CDS 84862226 84862351 84862226 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84862552 84862644 84862552 ID=MsaT015269.1.exon9;Parent=MsaT015269.1
Chr3 CDS 84862552 84862644 84862552 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84862744 84862809 84862744 ID=MsaT015269.1.exon8;Parent=MsaT015269.1
Chr3 CDS 84862744 84862809 84862744 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84863619 84863699 84863619 ID=MsaT015269.1.exon7;Parent=MsaT015269.1
Chr3 CDS 84863619 84863699 84863619 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84863804 84863986 84863804 ID=MsaT015269.1.exon6;Parent=MsaT015269.1
Chr3 CDS 84863804 84863986 84863804 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84864583 84864660 84864583 ID=MsaT015269.1.exon5;Parent=MsaT015269.1
Chr3 CDS 84864583 84864660 84864583 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84864745 84864936 84864745 ID=MsaT015269.1.exon4;Parent=MsaT015269.1
Chr3 CDS 84864745 84864936 84864745 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84865214 84865270 84865214 ID=MsaT015269.1.exon3;Parent=MsaT015269.1
Chr3 CDS 84865214 84865270 84865214 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84866228 84866351 84866228 ID=MsaT015269.1.exon2;Parent=MsaT015269.1
Chr3 CDS 84866228 84866351 84866228 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Chr3 exon 84866638 84866804 84866638 ID=MsaT015269.1.exon1;Parent=MsaT015269.1
Chr3 CDS 84866638 84866804 84866638 ID=cds.MsaT015269.1;Parent=MsaT015269.1
Gene Sequence

>MsaT015269.1

ATGGAAGATTCTGTTCAACGTAGGATGGAGCAATTTTATGAAGGAAACGACGGACCGCCATTACGTGTTCTTCCTATTGGTGGTCTGGGTGAAATTGGAATGAATTGTATGCTTGTTGGGAATCATGACCGTTATATCCTCATTGATGCTGGTATCATGTTTCCCGACTATGACGACCTTGGAGTACAAAAGATTATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGTCATGAAGATCATATCGGTGCGTTGCCTTGGGTCATCCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGCATTTTCCTTACATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTCGCTGGGCCATTTGAGATAGAACCAATCAGGGTGACTCATTCTATTCCTGACTGTTGTGGACTAGTTCTTCGTTGTTCTGATGGAACTATTCTTCACACTGGGGATTGGAAGATTGACGAGACACCACTTGATGGGAAAGTTTTTGATCGGGAGGGTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTGCTCTCACCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGATTCATTATTGAGGCACATTTCAGCTTCAAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATCTACATCGGATTGGAAGTGTCAAAGCTGCTGCCGATTTAACTGGGAGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGACCCATCAACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACTGGCTCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTTTGGAAGTAGCCATGCTTTCAAACTTACCAAGGAAGATATTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCCCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGAAATGAAAACTTACACACATCTGGACATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATTGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGGCATACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTGAGAAATAGAAGGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAAAATTTACAGTTGAAATATAGTGATGGTGACAAAGCATTTGGTACATCCGGTGAACTCTTCCTTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGATTAGCATGGAAATATTTCGCCCTAAAAATTTAGAAAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGTCTATGGCTGGACAAAGGGAAGCTGTTAGATGCACTATATAAAGCTGCTCATGCAGCTCTTTCTAGCTGTCCCGTCAAAAGTCCACTGGCTCACATGGAAAGAACTGTGTCGGAGATGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAGCGGCCCGAAGTAATTGCCATTGCGATAGAAAATCCTGGAGCAGTTTTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCACGTTGGTCCTGGAATATCAACATTTAGAAGATCCATGGATGAACATAAAAAGGAAAACCAGTCCACCACACTGCAAACAAGAGATGATGGCATTGACACAGAAGGACTATTACTTGAGAAAGAGACCACTACAACTGGAGCTGAAGGCGATTTATCTGATTCAGGGGAATCGGATGAATTTTGGAAGCCATTCATTGCATCATCAGTTGAGAAATCAATCAAAGCAAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCAAATATAAAGCAAGATGATTCTGAAGACATAGATGAAGCCAAGTCTGAAGAAATGTCTGATGCGGAGCCAGAGTCTCCAAAATCAGTAAAGAAAAATAAATGGAAAACCGAGGAAGTCAAGAAGCTGATTGATTTGCGGAGTGACCTCCGTGACAGATTTAAAGTTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAATGCAAATCTTTGTGGACATCTTTGGCACTTAAATATGAGGAGATCAAGAATGGGAAAGATAGCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAGGATATTGTCTAGTGATGAAACACCGGCAACAAATTGA

Protein sequence

>MsaT015269.1

MEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLTSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMNRISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERMRIALDGIIVISMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVKSPLAHMERTVSEMLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSHVGPGISTFRRSMDEHKKENQSTTLQTRDDGIDTEGLLLEKETTTTGAEGDLSDSGESDEFWKPFIASSVEKSIKANNGYVSRKEHKSNIKQDDSEDIDEAKSEEMSDAEPESPKSVKKNKWKTEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPATN*