AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG015321

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG015321 MtrunA17_Chr3g0116701 99.296 426 3 0 1 426 1 426 0.0 884
MsaG015321 MtrunA17_Chr4g0058241 85.647 425 57 1 1 421 1 425 0.0 766
MsaG015321 MtrunA17_Chr3g0123491 70.465 430 118 4 3 426 1 427 0.0 617
MsaG015321 MtrunA17_Chr3g0139371 60.621 419 130 7 12 419 4 398 2.44e-177 501
MsaG015321 MtrunA17_Chr8g0369241 29.508 366 195 6 93 418 138 480 1.61e-47 174
MsaG015321 MtrunA17_Chr6g0480541 31.609 348 205 7 77 419 881 1200 1.18e-44 166
MsaG015321 MtrunA17_Chr5g0437131 30.267 337 202 7 86 417 395 703 9.16e-42 157
MsaG015321 MtrunA17_Chr8g0370321 29.340 409 205 13 78 420 21 411 3.32e-39 146
MsaG015321 MtrunA17_Chr5g0407121 27.970 404 219 10 78 419 21 414 9.87e-39 145
MsaG015321 MtrunA17_Chr1g0210061 29.477 363 210 10 76 420 592 926 2.62e-37 144
MsaG015321 MtrunA17_Chr6g0480481 32.500 240 106 7 75 314 17 200 3.66e-29 113
MsaG015321 MtrunA17_Chr1g0179611 39.241 158 89 4 80 230 29 186 6.99e-28 115
MsaG015321 MtrunA17_Chr1g0179611 31.461 178 87 6 259 419 319 478 3.07e-17 84.0
MsaG015321 MtrunA17_Chr4g0065851 28.291 357 188 14 79 419 12 316 1.74e-25 108
MsaG015321 MtrunA17_Chr2g0320631 36.943 157 92 4 80 229 25 181 3.34e-25 107
MsaG015321 MtrunA17_Chr2g0320631 29.858 211 110 8 229 419 285 477 6.58e-18 85.9
MsaG015321 MtrunA17_Chr8g0369451 27.027 333 185 10 93 419 3 283 4.15e-25 107
MsaG015321 MtrunA17_Chr4g0027671 36.943 157 92 4 80 229 24 180 4.10e-24 104
MsaG015321 MtrunA17_Chr4g0027671 30.337 178 89 6 259 419 319 478 3.82e-18 86.7
MsaG015321 MtrunA17_Chr8g0392811 28.184 369 193 15 71 419 92 408 7.35e-24 104
MsaG015321 MtrunA17_Chr5g0409421 26.888 331 188 9 93 419 3 283 9.22e-24 102
MsaG015321 MtrunA17_Chr7g0248461 27.507 349 195 11 83 423 30 328 1.28e-23 101
MsaG015321 MtrunA17_Chr4g0051261 27.711 332 188 10 93 419 3 287 1.64e-23 99.8
MsaG015321 MtrunA17_Chr4g0002001 28.045 353 176 13 93 419 3 303 1.78e-23 100
MsaG015321 MtrunA17_Chr5g0397261 27.190 331 188 9 100 423 47 331 2.19e-23 100
MsaG015321 MtrunA17_Chr2g0287271 28.011 357 189 14 79 419 12 316 3.52e-23 102
MsaG015321 MtrunA17_Chr4g0030151 27.246 345 191 13 90 423 34 329 5.11e-23 99.8
MsaG015321 MtrunA17_Chr4g0045841 25.758 330 193 11 100 423 61 344 5.68e-23 99.8
MsaG015321 MtrunA17_Chr4g0057791 28.818 347 193 12 91 426 215 518 7.04e-23 100
MsaG015321 MtrunA17_Chr8g0348481 27.108 332 187 10 100 423 43 327 7.92e-22 96.3
MsaG015321 MtrunA17_Chr6g0483151 25.816 337 191 12 90 419 10 294 8.20e-22 96.7
MsaG015321 MtrunA17_Chr5g0443351 27.299 348 197 11 82 419 12 313 8.36e-22 97.4
MsaG015321 MtrunA17_Chr3g0099951 25.148 338 194 11 90 419 10 296 1.24e-21 96.3
MsaG015321 MtrunA17_Chr1g0187371 26.205 332 188 11 99 419 23 308 1.35e-21 94.7
MsaG015321 MtrunA17_Chr3g0141871 25.072 347 208 9 81 419 17 319 2.31e-21 95.1
MsaG015321 MtrunA17_Chr3g0096631 28.249 354 186 14 82 419 15 316 2.63e-21 96.7
MsaG015321 MtrunA17_Chr8g0358921 26.239 343 172 12 99 419 52 335 2.93e-21 94.4
MsaG015321 MtrunA17_Chr6g0482681 26.724 348 199 11 82 419 79 380 1.57e-20 94.0
MsaG015321 MtrunA17_Chr1g0194201 26.437 348 187 13 91 425 72 363 2.04e-20 92.8
MsaG015321 MtrunA17_Chr8g0339221 25.826 333 188 11 94 419 4 284 2.41e-20 92.8
MsaG015321 MtrunA17_Chr2g0293491 27.545 334 186 12 93 419 3 287 3.06e-20 90.5
MsaG015321 MtrunA17_Chr7g0270371 24.928 349 191 11 91 425 72 363 4.01e-20 92.0
MsaG015321 MtrunA17_Chr1g0193081 25.429 350 188 12 91 425 72 363 4.66e-20 91.7
MsaG015321 MtrunA17_Chr4g0030231 25.833 360 203 13 79 423 20 330 4.88e-20 91.3
MsaG015321 MtrunA17_Chr2g0284091 26.074 349 187 12 91 425 37 328 5.90e-20 90.9
MsaG015321 MtrunA17_Chr8g0378831 25.833 360 207 12 71 418 7 318 1.09e-19 90.1
MsaG015321 MtrunA17_Chr8g0350311 25.215 349 188 12 91 422 136 428 1.30e-19 90.9
MsaG015321 MtrunA17_Chr1g0203881 26.740 273 164 7 88 353 35 278 1.44e-19 90.9
MsaG015321 MtrunA17_Chr2g0277011 25.369 339 184 12 100 425 96 378 1.76e-19 90.1
MsaG015321 MtrunA17_Chr2g0314321 26.005 373 203 10 74 419 7 333 1.79e-19 90.9
MsaG015321 MtrunA17_Chr4g0038501 28.511 235 131 5 84 311 10 214 2.34e-19 91.3
MsaG015321 MtrunA17_Chr1g0190131 26.740 273 165 6 86 353 1 243 3.14e-19 87.4
MsaG015321 MtrunA17_Chr4g0038091 28.936 235 130 5 84 311 10 214 5.49e-19 90.1
MsaG015321 MtrunA17_Chr2g0320011 24.642 349 192 12 91 425 85 376 1.16e-18 87.8
MsaG015321 MtrunA17_Chr3g0093391 26.163 344 192 12 99 424 28 327 1.85e-18 87.4
MsaG015321 MtrunA17_Chr8g0359091 27.119 354 202 12 76 419 10 317 2.29e-18 87.4
MsaG015321 MtrunA17_Chr7g0246591 24.633 341 184 12 100 425 147 429 4.25e-18 86.3
MsaG015321 MtrunA17_Chr3g0127571 31.837 245 125 10 84 316 128 342 7.04e-18 85.9
MsaG015321 MtrunA17_Chr7g0257751 25.291 344 170 13 87 420 51 317 1.23e-17 85.1
MsaG015321 MtrunA17_Chr3g0093571 26.163 344 192 12 99 424 30 329 1.27e-17 85.1
MsaG015321 MtrunA17_Chr1g0205931 27.753 227 135 6 93 313 54 257 1.29e-17 85.1
MsaG015321 MtrunA17_Chr8g0387401 24.620 329 199 8 100 423 58 342 3.65e-17 82.8
MsaG015321 MtrunA17_Chr3g0122781 28.358 335 193 10 99 419 421 722 4.19e-17 84.0
MsaG015321 MtrunA17_Chr6g0478601 27.089 347 175 15 94 419 111 400 5.20e-17 83.2
MsaG015321 MtrunA17_Chr5g0402551 29.046 241 137 7 84 316 124 338 1.39e-16 82.0
MsaG015321 MtrunA17_Chr3g0130781 26.271 354 192 14 93 419 17 328 1.89e-16 81.3
MsaG015321 MtrunA17_Chr1g0170551 26.383 235 133 7 93 320 6 207 3.59e-16 81.3
MsaG015321 MtrunA17_Chr8g0384301 23.563 348 180 13 84 423 289 558 4.16e-16 80.5
MsaG015321 MtrunA17_Chr8g0377071 27.114 343 172 11 99 419 390 676 7.18e-16 80.1
MsaG015321 MtrunA17_Chr7g0267771 23.653 334 182 10 94 424 88 351 8.47e-16 79.3
MsaG015321 MtrunA17_Chr7g0258051 23.704 270 165 8 94 350 16 257 1.29e-15 79.0
MsaG015321 MtrunA17_Chr4g0018201 28.395 243 132 8 94 312 759 983 2.56e-15 78.6
MsaG015321 MtrunA17_Chr7g0242561 24.633 341 174 12 87 419 49 314 2.83e-15 77.8
MsaG015321 MtrunA17_Chr7g0245031 26.721 247 143 7 76 316 131 345 3.09e-15 77.4
MsaG015321 MtrunA17_Chr5g0428981 27.984 243 133 8 94 312 763 987 3.40e-15 78.2
MsaG015321 MtrunA17_Chr8g0385341 24.855 346 175 12 88 424 24 293 3.65e-15 77.4
MsaG015321 MtrunA17_Chr1g0176421 24.854 342 168 13 88 418 155 418 5.69e-15 77.0
MsaG015321 MtrunA17_Chr4g0045261 26.778 239 145 6 84 316 127 341 8.16e-15 76.6
MsaG015321 MtrunA17_Chr6g0453711 24.490 343 184 10 94 419 110 394 1.89e-14 75.5
MsaG015321 MtrunA17_Chr7g0272841 25.221 226 142 6 93 313 67 270 2.09e-14 75.5
MsaG015321 MtrunA17_Chr4g0030241 34.815 135 60 4 202 333 10 119 2.33e-14 71.2
MsaG015321 MtrunA17_Chr5g0419441 25.446 224 138 3 91 312 236 432 3.67e-14 74.7
MsaG015321 MtrunA17_Chr3g0130151 22.455 334 169 11 100 423 250 503 4.61e-14 74.3
MsaG015321 MtrunA17_Chr4g0053951 25.379 264 139 12 162 419 194 405 6.49e-14 73.2
MsaG015321 MtrunA17_Chr4g0001331 28.511 235 132 9 90 317 16 221 6.88e-14 73.2
MsaG015321 MtrunA17_Chr7g0274941 24.629 337 171 12 93 421 15 276 7.63e-14 72.0
MsaG015321 MtrunA17_Chr2g0286421 24.398 332 190 9 99 420 107 387 8.90e-14 73.2
MsaG015321 MtrunA17_Chr4g0061141 25.301 332 185 12 99 419 110 389 9.32e-14 73.2
MsaG015321 MtrunA17_Chr1g0191221 26.300 327 188 10 99 419 127 406 9.43e-14 73.2
MsaG015321 MtrunA17_Chr4g0025671 23.200 250 158 9 93 336 7 228 1.41e-13 73.2
MsaG015321 MtrunA17_Chr0c02g0489761 22.093 344 183 12 88 422 72 339 1.49e-13 72.4
MsaG015321 MtrunA17_Chr7g0218071 24.085 328 195 10 99 419 125 405 1.58e-13 72.8
MsaG015321 MtrunA17_Chr1g0150321 27.302 315 182 12 90 395 9 285 1.77e-13 72.0
MsaG015321 MtrunA17_Chr3g0131861 24.629 337 189 10 98 422 101 384 2.34e-13 72.0
MsaG015321 MtrunA17_Chr7g0234641 24.715 263 147 6 176 390 102 361 3.63e-13 70.9
MsaG015321 MtrunA17_Chr2g0317001 27.734 256 135 10 100 346 21 235 3.74e-13 71.6
MsaG015321 MtrunA17_Chr5g0401371 24.925 333 196 14 94 419 115 400 4.82e-13 70.5
MsaG015321 MtrunA17_Chr2g0317501 24.024 333 188 10 99 419 139 418 6.06e-13 70.9
MsaG015321 MtrunA17_Chr8g0386981 25.075 335 166 14 100 426 414 671 7.43e-13 70.9
MsaG015321 MtrunA17_Chr7g0267751 23.193 332 182 10 94 422 135 396 9.12e-13 70.1
MsaG015321 MtrunA17_Chr4g0053821 25.379 264 139 11 162 419 163 374 9.22e-13 69.3
MsaG015321 MtrunA17_Chr5g0396361 23.214 336 197 10 99 424 145 429 1.06e-12 70.1
MsaG015321 MtrunA17_Chr4g0033371 25.877 228 139 6 89 312 67 268 1.18e-12 69.7
MsaG015321 MtrunA17_Chr3g0114511 27.542 236 125 9 87 311 25 225 1.99e-12 68.6
MsaG015321 MtrunA17_Chr4g0066691 23.867 331 191 10 99 419 109 388 2.03e-12 68.9
MsaG015321 MtrunA17_Chr8g0383451 25.385 260 141 7 100 343 4 226 2.98e-12 68.2
MsaG015321 MtrunA17_Chr4g0059951 22.287 341 180 11 88 419 67 331 4.30e-12 67.8
MsaG015321 MtrunA17_Chr3g0102601 25.403 248 120 9 179 419 15 204 6.77e-12 65.5
MsaG015321 MtrunA17_Chr7g0244521 28.340 247 135 8 87 323 5 219 7.07e-12 67.0
MsaG015321 MtrunA17_Chr8g0385971 23.824 340 188 10 98 422 94 377 7.12e-12 67.4
MsaG015321 MtrunA17_Chr4g0059751 31.973 147 73 4 191 334 191 313 7.28e-12 67.0
MsaG015321 MtrunA17_Chr4g0074111 27.059 255 155 8 90 342 14 239 7.48e-12 66.6
MsaG015321 MtrunA17_Chr5g0428031 29.778 225 125 9 93 312 8 204 1.17e-11 66.2
MsaG015321 MtrunA17_Chr1g0190831 22.441 254 159 8 93 338 3 226 1.39e-11 66.6
MsaG015321 MtrunA17_Chr8g0353621 22.378 286 182 8 94 375 10 259 1.43e-11 64.7
MsaG015321 MtrunA17_Chr4g0074811 25.439 228 142 5 88 312 85 287 1.51e-11 66.2
MsaG015321 MtrunA17_Chr4g0030361 26.415 159 114 2 162 317 376 534 1.77e-11 66.2
MsaG015321 MtrunA17_Chr8g0351491 24.017 229 139 6 94 318 16 213 2.07e-11 64.3
MsaG015321 MtrunA17_Chr1g0173921 23.019 265 163 8 94 345 4 240 3.02e-11 65.9
MsaG015321 MtrunA17_Chr5g0432471 26.054 261 161 7 90 345 8 241 4.18e-11 64.7
MsaG015321 MtrunA17_Chr1g0187581 23.140 242 161 7 100 320 123 360 4.18e-11 64.7
MsaG015321 MtrunA17_Chr3g0107011 26.230 244 138 7 90 323 10 221 4.48e-11 64.7
MsaG015321 MtrunA17_Chr4g0040141 24.629 337 198 11 95 424 131 418 5.43e-11 64.7
MsaG015321 MtrunA17_Chr6g0449691 24.627 268 165 10 75 337 68 303 6.29e-11 64.3
MsaG015321 MtrunA17_Chr7g0260191 22.709 251 158 9 93 336 3 224 6.64e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG015321 AT4G24740.1 82.353 425 71 2 1 421 1 425 0.0 737
MsaG015321 AT4G24740.7 83.721 387 60 1 38 421 1 387 0.0 688
MsaG015321 AT3G53570.1 69.676 432 117 5 1 421 17 445 0.0 612
MsaG015321 AT3G53570.4 69.676 432 117 5 1 421 17 445 0.0 612
MsaG015321 AT3G53570.2 69.676 432 117 5 1 421 17 445 0.0 612
MsaG015321 AT3G53570.3 69.676 432 117 5 1 421 3 431 0.0 611
MsaG015321 AT3G53570.5 69.676 432 117 5 1 421 3 431 0.0 611
MsaG015321 AT4G24740.3 82.471 348 57 2 1 344 1 348 0.0 601
MsaG015321 AT4G24740.6 87.578 322 40 0 100 421 1 322 0.0 599
MsaG015321 AT4G24740.9 87.578 322 40 0 100 421 1 322 0.0 599
MsaG015321 AT4G24740.2 87.578 322 40 0 100 421 1 322 0.0 599
MsaG015321 AT4G24740.4 81.905 315 53 2 1 311 1 315 0.0 539
MsaG015321 AT4G32660.1 61.481 405 129 4 19 419 15 396 0.0 510
MsaG015321 AT4G32660.3 61.481 405 129 4 19 419 7 388 0.0 510
MsaG015321 AT4G24740.5 89.388 245 26 0 100 344 1 245 1.15e-164 462
MsaG015321 AT4G32660.2 62.637 364 109 4 19 378 15 355 8.36e-164 465
MsaG015321 AT4G32660.4 66.316 285 94 2 136 419 1 284 1.39e-138 398
MsaG015321 AT4G24740.10 81.279 219 41 0 203 421 1 219 1.27e-132 380
MsaG015321 AT4G24740.8 81.279 219 41 0 203 421 1 219 1.27e-132 380
MsaG015321 AT5G35980.2 30.518 367 190 6 93 418 121 463 6.05e-45 167
MsaG015321 AT5G35980.3 30.518 367 190 6 93 418 86 428 1.95e-44 166
MsaG015321 AT5G35980.1 30.352 369 192 6 93 420 121 465 2.11e-44 166
MsaG015321 AT1G13350.3 31.218 394 217 14 52 420 468 832 1.37e-43 163
MsaG015321 AT3G53640.1 31.215 362 204 11 76 419 305 639 2.39e-43 161
MsaG015321 AT1G13350.1 31.522 368 197 13 76 420 424 759 2.47e-43 162
MsaG015321 AT1G13350.2 31.522 368 197 13 76 420 451 786 2.71e-43 162
MsaG015321 AT2G40120.1 31.024 332 196 6 93 419 260 563 7.54e-43 159
MsaG015321 AT1G73460.2 32.239 335 194 7 90 419 854 1160 1.34e-42 160
MsaG015321 AT1G73460.1 32.239 335 194 7 90 419 854 1160 1.34e-42 160
MsaG015321 AT3G17750.1 31.232 349 207 7 77 420 810 1130 1.50e-42 160
MsaG015321 AT1G73450.1 32.239 335 194 7 90 419 837 1143 1.60e-42 160
MsaG015321 AT3G25840.2 30.194 361 208 10 76 419 337 670 2.12e-41 155
MsaG015321 AT4G35500.1 29.197 411 207 12 78 419 21 416 2.54e-41 152
MsaG015321 AT2G17530.1 29.136 405 214 10 78 419 21 415 8.96e-41 150
MsaG015321 AT2G17530.3 29.136 405 214 10 78 419 21 415 8.96e-41 150
MsaG015321 AT3G25840.1 30.110 362 209 10 76 420 599 933 1.70e-40 154
MsaG015321 AT2G17530.2 30.960 323 161 8 78 339 21 342 2.26e-38 142
MsaG015321 AT4G35500.2 28.398 412 210 13 78 419 21 417 9.79e-37 139
MsaG015321 AT3G53030.1 39.241 158 89 4 80 230 27 184 1.07e-27 115
MsaG015321 AT3G53030.1 30.857 175 92 5 259 419 307 466 3.87e-17 84.0
MsaG015321 AT3G44850.1 36.196 163 97 4 75 230 25 187 2.24e-26 111
MsaG015321 AT3G44850.1 33.143 175 88 7 259 419 322 481 1.12e-17 85.5
MsaG015321 AT4G11330.1 28.080 349 193 12 83 423 35 333 6.05e-26 108
MsaG015321 AT1G76540.1 25.000 332 192 9 99 419 19 304 1.77e-25 106
MsaG015321 AT5G22840.1 35.443 158 95 4 80 230 30 187 3.51e-24 105
MsaG015321 AT5G22840.1 32.022 178 86 7 259 419 311 470 7.83e-17 83.2
MsaG015321 AT1G01560.2 28.571 329 186 11 100 423 46 330 7.13e-24 102
MsaG015321 AT1G20930.1 26.205 332 188 10 99 419 21 306 1.69e-23 100
MsaG015321 AT5G19010.1 29.096 354 183 15 82 419 15 316 2.12e-23 103
MsaG015321 AT4G13020.8 28.280 343 177 10 93 419 3 292 2.37e-23 101
MsaG015321 AT4G19110.2 26.426 333 187 10 93 419 3 283 2.83e-23 102
MsaG015321 AT4G13020.5 28.863 343 175 10 93 419 3 292 2.92e-23 101
MsaG015321 AT4G19110.1 26.426 333 187 10 93 419 3 283 3.02e-23 102
MsaG015321 AT4G01370.1 26.829 328 193 9 100 423 49 333 3.64e-23 100
MsaG015321 AT3G59790.1 26.807 332 187 11 100 423 66 349 6.28e-23 100
MsaG015321 AT3G54180.1 27.666 347 183 11 93 419 3 301 8.64e-23 98.6
MsaG015321 AT2G43790.1 27.327 333 184 13 100 423 69 352 1.78e-22 99.0
MsaG015321 AT1G73670.1 28.184 369 197 15 67 419 65 381 1.91e-22 100
MsaG015321 AT5G45430.2 26.727 333 186 11 93 419 3 283 2.02e-22 99.8
MsaG015321 AT5G45430.1 26.727 333 186 11 93 419 3 283 2.24e-22 99.8
MsaG015321 AT3G18040.5 29.944 354 180 15 82 419 8 309 2.99e-22 99.4
MsaG015321 AT3G18040.4 29.944 354 180 15 82 419 122 423 3.48e-22 99.8
MsaG015321 AT3G18040.1 29.944 354 180 15 82 419 13 314 4.27e-22 99.0
MsaG015321 AT3G18040.3 29.944 354 180 15 82 419 122 423 5.55e-22 99.0
MsaG015321 AT4G36450.1 26.479 355 202 13 74 419 12 316 6.77e-22 96.7
MsaG015321 AT3G45640.1 27.457 346 189 15 90 423 33 328 7.89e-22 96.7
MsaG015321 AT2G18170.1 25.556 360 210 12 71 419 7 319 8.24e-22 96.7
MsaG015321 AT3G48750.1 26.769 325 188 10 99 419 9 287 9.07e-22 95.1
MsaG015321 AT3G14720.1 27.119 354 198 10 78 419 11 316 3.07e-21 96.7
MsaG015321 AT1G01560.3 28.076 317 179 11 100 411 46 318 3.49e-21 94.7
MsaG015321 AT1G10210.2 27.247 356 209 12 71 419 7 319 6.01e-21 94.4
MsaG015321 AT1G10210.3 27.247 356 209 12 71 419 7 319 6.01e-21 94.4
MsaG015321 AT1G10210.1 27.247 356 209 12 71 419 7 319 6.01e-21 94.4
MsaG015321 AT2G46070.1 25.610 328 197 8 100 423 47 331 6.81e-21 94.0
MsaG015321 AT3G14720.2 27.119 354 198 10 78 419 11 316 7.65e-21 94.4
MsaG015321 AT3G14720.3 27.119 354 198 10 78 419 11 316 7.65e-21 94.4
MsaG015321 AT2G46070.3 25.610 328 197 8 100 423 81 365 7.93e-21 94.4
MsaG015321 AT1G59580.2 25.762 361 208 11 71 419 7 319 8.92e-21 94.0
MsaG015321 AT1G59580.1 25.762 361 208 11 71 419 7 319 8.92e-21 94.0
MsaG015321 AT5G14640.1 25.356 351 187 12 91 425 71 362 1.06e-20 94.0
MsaG015321 AT5G14640.2 25.356 351 187 12 91 425 71 362 1.06e-20 94.0
MsaG015321 AT2G01450.3 27.299 348 197 11 82 419 6 307 1.42e-20 94.4
MsaG015321 AT2G01450.1 27.299 348 197 11 82 419 6 307 1.42e-20 94.4
MsaG015321 AT2G01450.2 27.299 348 197 11 82 419 6 307 1.42e-20 94.4
MsaG015321 AT2G01450.4 27.299 348 197 11 82 419 6 307 1.42e-20 94.4
MsaG015321 AT1G53510.1 27.557 352 199 10 78 419 11 316 3.11e-20 93.6
MsaG015321 AT1G18150.3 27.147 361 197 13 75 419 85 395 4.63e-20 93.2
MsaG015321 AT1G18150.2 27.147 361 197 13 75 419 85 395 4.63e-20 93.2
MsaG015321 AT1G18150.1 27.147 361 197 13 75 419 85 395 4.63e-20 93.2
MsaG015321 AT4G18710.1 25.208 361 175 11 91 425 37 328 5.38e-20 91.7
MsaG015321 AT5G63610.1 26.648 364 186 15 93 424 24 338 1.03e-19 91.7
MsaG015321 AT1G57870.1 26.074 349 187 13 91 425 79 370 1.38e-19 90.9
MsaG015321 AT1G57870.4 26.074 349 187 13 91 425 79 370 1.38e-19 90.9
MsaG015321 AT1G57870.2 26.074 349 187 13 91 425 79 370 1.38e-19 90.9
MsaG015321 AT2G42880.1 27.011 348 198 11 82 419 15 316 1.69e-19 91.3
MsaG015321 AT2G42880.2 27.011 348 198 11 82 419 15 316 1.69e-19 90.9
MsaG015321 AT1G57870.3 26.074 349 187 13 91 425 79 370 1.75e-19 90.5
MsaG015321 AT3G13530.1 28.085 235 132 5 84 311 10 214 2.54e-19 91.3
MsaG015321 AT1G09840.3 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.7 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.10 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.6 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.4 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.1 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.9 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.5 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.8 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G09840.2 25.143 350 189 13 91 425 80 371 2.57e-19 90.1
MsaG015321 AT1G06390.2 25.215 349 180 12 91 419 67 354 2.75e-19 89.7
MsaG015321 AT1G06390.1 25.215 349 180 12 91 419 67 354 2.75e-19 89.7
MsaG015321 AT3G05840.2 24.355 349 193 11 91 425 70 361 3.69e-19 89.4
MsaG015321 AT3G05840.1 24.355 349 193 11 91 425 70 361 3.69e-19 89.4
MsaG015321 AT4G04710.1 25.513 341 180 12 88 419 30 305 4.14e-19 89.7
MsaG015321 AT4G04710.4 25.513 341 180 12 88 419 30 305 4.57e-19 89.7
MsaG015321 AT5G26751.1 24.355 349 193 11 91 425 66 357 4.83e-19 89.0
MsaG015321 AT3G61160.4 25.215 349 190 13 91 425 99 390 4.97e-19 89.0
MsaG015321 AT3G61160.2 25.215 349 190 13 91 425 106 397 5.17e-19 89.4
MsaG015321 AT3G61160.1 25.215 349 190 13 91 425 99 390 5.39e-19 89.0
MsaG015321 AT1G07880.2 24.850 334 192 12 100 423 39 323 6.15e-19 88.2
MsaG015321 AT3G07980.1 28.511 235 131 5 84 311 10 214 9.05e-19 89.7
MsaG015321 AT3G07980.2 28.511 235 131 5 84 311 10 214 9.86e-19 89.7
MsaG015321 AT5G63370.7 26.648 364 202 10 74 419 277 593 1.01e-18 89.0
MsaG015321 AT5G63370.8 26.648 364 202 10 74 419 277 593 1.01e-18 89.0
MsaG015321 AT5G63370.4 26.648 364 202 10 74 419 277 593 1.01e-18 89.0
MsaG015321 AT5G63370.6 26.648 364 202 10 74 419 277 593 1.01e-18 89.0
MsaG015321 AT5G63370.1 26.648 364 202 10 74 419 277 593 1.01e-18 89.0
MsaG015321 AT2G46070.2 25.478 314 187 8 100 409 47 317 1.26e-18 86.7
MsaG015321 AT5G63370.2 25.956 366 202 10 74 419 143 459 1.32e-18 88.2
MsaG015321 AT5G63370.3 25.956 366 202 10 74 419 143 459 1.32e-18 88.2
MsaG015321 AT1G08650.1 24.453 274 173 6 86 353 7 252 1.70e-18 85.9
MsaG015321 AT1G08650.2 24.453 274 173 6 86 353 7 252 2.13e-18 85.1
MsaG015321 AT2G30980.1 25.788 349 178 12 91 419 69 356 2.32e-18 87.0
MsaG015321 AT1G67580.1 27.168 346 168 11 99 419 411 697 2.50e-18 88.2
MsaG015321 AT1G67580.2 27.168 346 168 11 99 419 411 697 2.50e-18 88.2
MsaG015321 AT4G04710.2 24.340 341 171 10 88 419 30 292 3.43e-18 87.0
MsaG015321 AT4G00720.1 24.501 351 190 13 91 425 135 426 5.44e-18 86.3
MsaG015321 AT1G12580.1 29.362 235 130 7 89 316 39 244 7.88e-18 85.9
MsaG015321 AT1G01560.4 30.380 237 134 7 100 331 46 256 2.65e-17 82.0
MsaG015321 AT1G01560.1 30.380 237 134 7 100 331 46 256 2.65e-17 82.0
MsaG015321 AT4G18710.2 27.007 274 130 9 91 339 31 259 3.31e-17 81.6
MsaG015321 AT5G24430.1 27.801 241 140 7 84 316 133 347 9.65e-17 82.8
MsaG015321 AT5G57630.2 30.041 243 133 8 83 319 1 212 1.22e-16 81.6
MsaG015321 AT3G18040.2 31.660 259 126 10 168 419 12 226 1.33e-16 81.6
MsaG015321 AT3G49370.1 27.801 241 140 7 84 316 132 346 1.37e-16 82.4
MsaG015321 AT2G38910.1 27.074 229 137 6 88 312 128 330 1.55e-16 82.4
MsaG015321 AT5G57630.1 30.041 243 133 8 83 319 1 212 1.76e-16 81.3
MsaG015321 AT4G19110.3 27.344 256 131 8 170 419 21 227 1.98e-16 81.3
MsaG015321 AT2G46700.1 28.125 256 146 8 69 316 122 347 3.16e-16 81.3
MsaG015321 AT3G17850.1 27.239 268 151 9 94 343 882 1123 3.29e-16 81.6
MsaG015321 AT5G64960.1 25.723 346 191 12 99 424 31 330 3.98e-16 80.9
MsaG015321 AT3G15220.1 27.481 262 140 10 100 352 21 241 8.74e-16 80.1
MsaG015321 AT5G10270.1 25.145 346 193 12 99 424 31 330 9.18e-16 79.7
MsaG015321 AT1G09000.2 27.727 220 132 6 100 314 75 272 1.84e-15 79.0
MsaG015321 AT1G09000.1 27.727 220 132 6 100 314 75 272 1.92e-15 79.0
MsaG015321 AT5G63370.5 27.239 268 162 6 74 333 277 519 2.03e-15 78.6
MsaG015321 AT5G63370.10 27.239 268 162 6 74 333 277 519 2.03e-15 78.6
MsaG015321 AT3G61160.6 24.627 268 153 9 91 344 106 338 2.50e-15 77.4
MsaG015321 AT3G61160.5 24.627 268 153 9 91 344 99 331 2.61e-15 77.8
MsaG015321 AT3G61160.3 24.627 268 153 9 91 344 99 331 2.62e-15 77.4
MsaG015321 AT5G63370.9 26.296 270 162 6 74 333 143 385 3.04e-15 77.8
MsaG015321 AT5G62310.1 24.207 347 185 13 94 419 754 1043 4.41e-15 78.2
MsaG015321 AT3G56760.1 26.778 239 145 6 84 316 114 328 4.55e-15 77.8
MsaG015321 AT4G04700.1 26.582 237 138 7 89 316 23 232 4.90e-15 77.4
MsaG015321 AT3G50530.1 27.801 241 140 7 84 316 138 352 4.93e-15 77.8
MsaG015321 AT3G04530.1 25.403 248 143 9 84 322 5 219 5.17e-15 75.5
MsaG015321 AT1G54960.1 28.509 228 134 6 93 314 67 271 5.52e-15 77.4
MsaG015321 AT1G54960.2 28.509 228 134 6 93 314 67 271 5.52e-15 77.4
MsaG015321 AT5G50860.1 23.626 364 220 12 69 424 90 403 5.77e-15 77.4
MsaG015321 AT5G50860.2 23.626 364 220 12 69 424 90 403 6.28e-15 77.0
MsaG015321 AT4G21940.3 24.316 329 176 9 94 419 102 360 6.65e-15 77.0
MsaG015321 AT4G21940.2 24.620 329 175 9 94 419 102 360 7.86e-15 77.0
MsaG015321 AT4G21940.1 24.316 329 176 9 94 419 102 360 8.57e-15 76.6
MsaG015321 AT5G12480.1 28.936 235 127 9 87 312 52 255 1.11e-14 76.3
MsaG015321 AT2G41140.1 27.459 244 137 8 84 316 113 327 1.18e-14 76.3
MsaG015321 AT1G69220.1 24.670 227 142 3 88 312 243 442 1.76e-14 76.3
MsaG015321 AT3G06030.1 27.313 227 136 6 93 313 67 270 1.84e-14 75.9
MsaG015321 AT3G19100.1 28.216 241 139 7 84 316 134 348 2.07e-14 75.9
MsaG015321 AT3G08730.1 26.407 231 129 6 94 316 134 331 3.25e-14 74.7
MsaG015321 AT3G08730.2 26.407 231 129 6 94 316 134 331 3.25e-14 74.7
MsaG015321 AT2G34290.1 29.839 248 137 8 100 334 7 230 3.49e-14 72.8
MsaG015321 AT1G53570.6 25.214 234 137 8 100 325 220 423 3.74e-14 74.7
MsaG015321 AT1G53570.7 25.214 234 137 8 100 325 220 423 4.17e-14 74.7
MsaG015321 AT1G53165.1 27.734 256 135 10 100 346 21 235 4.99e-14 74.7
MsaG015321 AT1G53570.4 25.214 234 137 8 100 325 220 423 5.05e-14 74.3
MsaG015321 AT1G53570.1 25.214 234 137 8 100 325 220 423 5.19e-14 74.3
MsaG015321 AT1G07880.1 26.141 241 139 8 100 331 39 249 5.25e-14 72.0
MsaG015321 AT1G53570.2 25.214 234 137 8 100 325 220 423 5.28e-14 74.3
MsaG015321 AT1G53570.3 25.214 234 137 8 100 325 220 423 5.28e-14 74.3
MsaG015321 AT1G53165.2 27.734 256 135 10 100 346 21 235 5.82e-14 74.3
MsaG015321 AT1G53165.3 27.734 256 135 10 100 346 21 235 5.84e-14 74.3
MsaG015321 AT4G29810.1 25.571 219 128 7 100 313 76 264 6.43e-14 73.2
MsaG015321 AT1G50240.3 25.751 233 133 7 94 319 6 205 6.62e-14 74.7
MsaG015321 AT1G50240.2 25.751 233 133 7 94 319 6 205 6.62e-14 74.7
MsaG015321 AT4G29810.2 24.221 289 176 10 100 378 85 340 7.11e-14 73.2
MsaG015321 AT2G17890.1 25.291 344 174 12 84 418 98 367 8.19e-14 73.9
MsaG015321 AT3G51850.3 25.000 336 177 13 88 419 48 312 9.59e-14 73.2
MsaG015321 AT4G29810.3 25.571 219 128 7 100 313 85 273 1.06e-13 72.4
MsaG015321 AT3G08720.1 25.974 231 130 6 94 316 140 337 1.52e-13 72.8
MsaG015321 AT3G08720.3 25.974 231 130 6 94 316 140 337 1.52e-13 72.8
MsaG015321 AT3G08720.4 25.974 231 130 6 94 316 140 337 1.52e-13 72.8
MsaG015321 AT3G08720.2 25.974 231 130 6 94 316 140 337 1.52e-13 72.8
MsaG015321 AT1G71530.2 23.512 336 196 9 99 424 152 436 1.58e-13 72.4
MsaG015321 AT4G10010.2 24.850 334 194 10 99 424 161 445 1.74e-13 72.8
MsaG015321 AT1G09840.11 25.911 247 115 9 192 425 53 244 1.80e-13 71.2
MsaG015321 AT1G71530.1 23.512 336 196 9 99 424 152 436 1.98e-13 72.8
MsaG015321 AT2G41920.1 28.571 252 142 10 101 334 13 244 2.01e-13 71.2
MsaG015321 AT2G23070.1 24.314 255 135 9 172 419 214 417 2.29e-13 72.0
MsaG015321 AT5G67380.2 24.304 395 212 18 52 421 32 364 2.53e-13 71.6
MsaG015321 AT3G51850.1 25.000 336 177 13 88 419 48 312 2.68e-13 72.0
MsaG015321 AT3G51850.2 25.000 336 177 13 88 419 48 312 2.91e-13 72.0
MsaG015321 AT3G44200.2 23.600 250 157 9 93 336 7 228 3.45e-13 72.0
MsaG015321 AT3G44200.1 23.600 250 157 9 93 336 7 228 3.45e-13 72.0
MsaG015321 AT2G23080.1 24.719 267 141 11 162 421 108 321 3.66e-13 70.5
MsaG015321 AT5G04510.2 25.000 236 152 9 88 317 37 253 6.05e-13 70.5
MsaG015321 AT5G27790.1 28.016 257 149 8 94 334 20 256 6.23e-13 69.7
MsaG015321 AT1G74740.1 25.794 252 148 9 90 332 55 276 7.42e-13 70.9
MsaG015321 AT1G48490.3 25.648 347 174 15 94 419 828 1111 9.35e-13 70.9
MsaG015321 AT1G48490.2 25.648 347 174 15 94 419 828 1111 9.35e-13 70.9
MsaG015321 AT1G48490.1 25.648 347 174 15 94 419 828 1111 9.35e-13 70.9
MsaG015321 AT5G39420.1 23.795 332 192 12 99 420 110 390 9.49e-13 70.5
MsaG015321 AT1G48490.4 25.648 347 174 15 94 419 829 1112 9.60e-13 70.9
MsaG015321 AT5G04510.1 25.000 236 152 9 88 317 37 253 9.83e-13 70.1
MsaG015321 AT3G53930.1 24.398 332 171 10 94 419 20 277 9.89e-13 70.5
MsaG015321 AT3G53930.2 24.398 332 171 10 94 419 20 277 9.89e-13 70.5
MsaG015321 AT5G04510.3 25.000 236 152 9 88 317 37 253 1.08e-12 68.9
MsaG015321 AT1G53050.2 24.103 390 232 14 42 419 81 418 1.32e-12 70.1
MsaG015321 AT1G53050.1 24.103 390 232 14 42 419 81 418 1.32e-12 70.1
MsaG015321 AT4G08500.1 25.161 310 165 12 41 337 296 551 1.40e-12 70.1
MsaG015321 AT5G55090.1 28.571 140 72 3 176 314 85 197 1.73e-12 69.3
MsaG015321 AT1G18670.2 23.100 329 201 9 99 420 136 419 2.22e-12 69.3
MsaG015321 AT1G18670.3 23.171 328 200 9 99 419 136 418 2.65e-12 69.3
MsaG015321 AT3G50000.1 25.660 265 141 12 162 421 178 391 2.69e-12 68.6
MsaG015321 AT1G18670.1 23.100 329 201 9 99 420 136 419 2.75e-12 69.3
MsaG015321 AT1G69220.2 25.106 235 139 5 88 312 208 415 2.76e-12 69.3
MsaG015321 AT4G04720.2 24.603 378 199 14 51 419 38 338 2.79e-12 68.9
MsaG015321 AT4G04720.1 24.603 378 199 14 51 419 38 338 2.79e-12 68.9
MsaG015321 AT2G25090.1 26.182 275 157 9 90 338 11 265 2.95e-12 68.6
MsaG015321 AT1G45160.2 23.919 347 182 12 94 419 670 955 3.05e-12 69.3
MsaG015321 AT4G04695.1 24.354 271 165 7 94 353 28 269 3.08e-12 68.6
MsaG015321 AT5G28290.3 21.514 251 163 7 94 338 4 226 3.54e-12 68.6
MsaG015321 AT5G67380.1 25.660 265 141 12 162 421 184 397 3.77e-12 68.2
MsaG015321 AT1G45160.1 23.919 347 182 12 94 419 670 955 3.94e-12 68.9
MsaG015321 AT5G28290.1 21.514 251 163 7 94 338 4 226 4.28e-12 68.6
MsaG015321 AT5G28290.2 21.514 251 163 7 94 338 4 226 4.28e-12 68.6
MsaG015321 AT5G55090.2 28.571 140 72 3 176 314 147 259 4.55e-12 68.2
MsaG015321 AT1G18890.1 23.529 340 173 12 90 419 59 321 4.65e-12 68.2
MsaG015321 AT3G01085.1 22.590 332 195 10 99 419 120 400 4.80e-12 68.2
MsaG015321 AT3G01085.2 22.590 332 195 10 99 419 120 400 4.80e-12 68.2
MsaG015321 AT5G64960.2 23.718 312 183 10 119 424 15 277 5.69e-12 67.8
MsaG015321 AT3G01085.3 22.590 332 195 10 99 419 120 400 5.69e-12 68.2
MsaG015321 AT2G41860.1 24.047 341 176 13 87 419 47 312 7.81e-12 67.4
MsaG015321 AT3G04810.2 21.116 251 164 8 94 338 4 226 1.17e-11 67.0
MsaG015321 AT3G04810.1 21.116 251 164 8 94 338 4 226 1.17e-11 67.0
MsaG015321 AT3G04810.3 21.116 251 164 8 94 338 4 226 1.17e-11 67.0
MsaG015321 AT3G63280.2 22.000 250 161 8 93 336 3 224 1.39e-11 66.6
MsaG015321 AT3G63280.3 22.000 250 161 8 93 336 3 224 1.39e-11 66.6
MsaG015321 AT3G63280.1 22.000 250 161 8 93 336 3 224 1.39e-11 66.6
MsaG015321 AT1G54610.1 24.251 334 192 9 99 422 123 405 1.51e-11 66.6
MsaG015321 AT1G54610.3 24.251 334 192 9 99 422 123 405 1.51e-11 66.6
MsaG015321 AT1G54610.2 24.251 334 192 9 99 422 123 405 1.51e-11 66.6
MsaG015321 AT1G71530.3 23.242 327 190 9 99 415 152 427 1.55e-11 66.2
MsaG015321 AT2G41860.2 23.977 342 175 14 87 419 47 312 1.61e-11 66.6
MsaG015321 AT1G30640.2 24.498 249 157 8 100 322 126 369 1.80e-11 66.6
MsaG015321 AT1G30640.1 24.498 249 157 8 100 322 126 369 1.80e-11 66.6
MsaG015321 AT1G30640.3 24.498 249 157 8 100 322 33 276 1.85e-11 66.2
MsaG015321 AT3G63280.4 22.000 250 161 8 93 336 57 278 1.99e-11 66.2
MsaG015321 AT5G25110.1 27.372 274 150 10 59 322 14 248 2.03e-11 66.2
MsaG015321 AT3G50530.2 26.482 253 159 9 84 316 138 383 2.32e-11 66.2
MsaG015321 AT2G20470.3 25.106 235 147 6 100 312 130 357 3.66e-11 65.5
MsaG015321 AT2G26980.2 29.075 227 130 8 91 312 11 211 3.71e-11 63.9
MsaG015321 AT2G34650.1 24.627 268 156 8 94 321 75 336 3.92e-11 65.1
MsaG015321 AT4G38230.4 23.636 330 177 10 94 419 24 282 3.95e-11 65.1
MsaG015321 AT4G38230.3 23.636 330 177 10 94 419 24 282 3.95e-11 65.1
MsaG015321 AT2G20470.2 25.106 235 147 6 100 312 130 357 4.02e-11 65.5
MsaG015321 AT2G20470.1 25.106 235 147 6 100 312 130 357 4.02e-11 65.5
MsaG015321 AT4G38230.2 23.636 330 177 10 94 419 54 312 4.13e-11 65.1
MsaG015321 AT2G41910.1 25.764 229 135 7 100 313 12 220 4.33e-11 64.7
MsaG015321 AT1G30270.1 25.141 354 196 14 93 407 30 353 4.87e-11 65.1
MsaG015321 AT1G30270.2 25.141 354 196 14 93 407 30 353 5.15e-11 64.7
MsaG015321 AT3G23340.1 25.926 243 132 10 90 317 5 214 5.97e-11 64.7
MsaG015321 AT5G58380.1 25.941 239 145 6 90 323 8 219 6.32e-11 64.7
MsaG015321 AT3G05050.3 24.303 251 157 7 99 343 143 366 6.37e-11 64.7
MsaG015321 AT3G05050.2 24.303 251 157 7 99 343 143 366 6.37e-11 64.7
MsaG015321 AT3G05050.1 24.303 251 157 7 99 343 143 366 6.37e-11 64.7
MsaG015321 AT2G26980.3 29.515 227 129 8 91 312 11 211 6.51e-11 64.3
MsaG015321 AT2G26980.1 29.515 227 129 8 91 312 11 211 6.56e-11 64.3
MsaG015321 AT2G26980.4 29.515 227 129 8 91 312 21 221 6.67e-11 64.3
MsaG015321 AT4G24400.2 29.778 225 125 9 93 312 8 204 6.82e-11 64.3
MsaG015321 AT4G24400.1 29.778 225 125 9 93 312 8 204 8.21e-11 63.9
MsaG015321 AT2G26980.5 29.515 227 129 8 91 312 11 211 9.57e-11 63.9
MsaG015321 AT3G63340.9 27.308 260 137 9 196 419 127 370 9.94e-11 63.5

Find 90 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCACTAGTTCTCTGTTTA+AGG 0.094574 3:+85501181 MsaT015321.1:CDS
GCTATAAAAGTTATTGATTT+TGG 0.156084 3:+85502662 MsaT015321.1:CDS
TATCGCACGAACAACTTTAA+TGG 0.165031 3:-85501685 None:intergenic
AGGAACATTTGGACAGGTTT+TGG 0.250768 3:+85501629 MsaT015321.1:CDS
TTGTATCAACACGTCATTAT+AGG 0.269120 3:+85502720 MsaT015321.1:CDS
GATCGACATGCTGCATTATA+AGG 0.284242 3:-85503466 None:intergenic
CCCAATCGCGCTCTCTTTCT+CGG 0.321999 3:-85500043 None:intergenic
GTGTTGATACAATGTAATTT+TGG 0.326386 3:-85502709 None:intergenic
CAACAGGTGTTTGAGAAACT+TGG 0.334035 3:+85502012 MsaT015321.1:intron
ATCACTAGTTCTCTGTTTAA+GGG 0.336676 3:+85501182 MsaT015321.1:CDS
CGAGATTGGAAGACAACTAT+TGG 0.340182 3:+85502098 MsaT015321.1:CDS
GGCCAGAGGGTGCAAATTCC+AGG 0.350876 3:+85503289 MsaT015321.1:CDS
CTTGCAGTTGTGTGCAAATA+CGG 0.358647 3:+85501872 MsaT015321.1:intron
ATTGATCTTGTTCGCGAGAT+TGG 0.361635 3:+85502084 MsaT015321.1:CDS
CAGCATTTCAATTTCAATCA+TGG 0.362427 3:-85501727 None:intergenic
TTTCAGGCTTCAGATCAGTA+TGG 0.389467 3:-85502293 None:intergenic
TGTATCAACACGTCATTATA+GGG 0.391748 3:+85502721 MsaT015321.1:CDS
AAATTCCAGGGAGAGTATTA+AGG 0.404205 3:+85503302 MsaT015321.1:CDS
GGAGCTATCCATGTGATGTT+TGG 0.409101 3:+85502917 MsaT015321.1:CDS
CAACTTGGGAAGCATGATAA+AGG 0.415253 3:+85501753 MsaT015321.1:CDS
TTCAATATCTGCTGCGGTAA+CGG 0.419875 3:-85503129 None:intergenic
AAAATGGGTGAAGGAACATT+TGG 0.420108 3:+85501618 MsaT015321.1:CDS
CTAGCTGTAACTCTTTCAAA+TGG 0.421308 3:-85503539 None:intergenic
TCCCTGGAATTTGCACCCTC+TGG 0.421349 3:-85503291 None:intergenic
GAAAGAGAGCGCGATTGGGC+TGG 0.428088 3:+85500047 MsaT015321.1:CDS
ACCGAGAAAGAGAGCGCGAT+TGG 0.428099 3:+85500042 MsaT015321.1:CDS
TGGAGTGCTGGGACAGAGAA+AGG 0.428372 3:+85501649 MsaT015321.1:CDS
TTTAGAGCATCTTGCCATGA+TGG 0.438127 3:+85503092 MsaT015321.1:CDS
GGCCATTACATGTTTGAGCT+TGG 0.438463 3:+85501251 MsaT015321.1:CDS
GTAAAAGGAGCAAGGTGCTC+TGG 0.446255 3:-85502618 None:intergenic
TTTAAGGGAGTTGCTCGAAA+TGG 0.446694 3:+85501197 MsaT015321.1:CDS
TCTTTATGAGAGATCACCTT+AGG 0.449137 3:+85503582 MsaT015321.1:CDS
AAAGAGAGCGCGATTGGGCT+GGG 0.450018 3:+85500048 MsaT015321.1:CDS
AACAAAAGTACCTTGTAGTC+GGG 0.450784 3:-85502351 None:intergenic
TGAATTCTCTCGCAATTACA+TGG 0.453142 3:+85500012 MsaT015321.1:CDS
ATCTCGCGAACAAGATCAAT+GGG 0.463178 3:-85502081 None:intergenic
CGAAGAAAATCGTATAAGCT+TGG 0.464676 3:-85502036 None:intergenic
CCATGTGATGTTTGGAGTGT+GGG 0.465909 3:+85502925 MsaT015321.1:CDS
CTTCCGTACAATCATGGAGA+TGG 0.471197 3:+85499979 None:intergenic
CTTTGTCGTCATCTCGCCAT+GGG 0.478622 3:-85501226 None:intergenic
AATGCAGCATGTCGATCATT+CGG 0.480233 3:+85503472 MsaT015321.1:CDS
TTGAAATGCTGCAGCAACTT+GGG 0.485900 3:+85501739 MsaT015321.1:CDS
GCCATGATGGAGAGGGTGCT+TGG 0.489778 3:+85503105 MsaT015321.1:CDS
CTCCAAGCTCAAACATGTAA+TGG 0.492085 3:-85501253 None:intergenic
AATCTCGCGAACAAGATCAA+TGG 0.492792 3:-85502082 None:intergenic
ATCGCGCTCTCTTTCTCGGT+GGG 0.493235 3:-85500039 None:intergenic
CCGAGAAAGAGAGCGCGATT+GGG 0.493659 3:+85500043 MsaT015321.1:CDS
AGGTGATCTCTCATAAAGAA+TGG 0.493809 3:-85503578 None:intergenic
AATGAAGCTTCCTCGACTGC+AGG 0.507820 3:+85503329 MsaT015321.1:CDS
TCTTTGTCGTCATCTCGCCA+TGG 0.511594 3:-85501227 None:intergenic
AGGGCACCTGAAGTTATCCT+TGG 0.519240 3:+85502740 MsaT015321.1:CDS
GGGTGAAGGAACATTTGGAC+AGG 0.523233 3:+85501623 MsaT015321.1:CDS
TACAGCCTTAATACTCTCCC+TGG 0.524396 3:-85503307 None:intergenic
CAGCATGTCGATCATTCGGC+TGG 0.527255 3:+85503476 MsaT015321.1:CDS
GTTGTGTGCAAATACGGAAC+TGG 0.532397 3:+85501878 MsaT015321.1:intron
TACATACCAAGGATAACTTC+AGG 0.537818 3:-85502746 None:intergenic
GTGCTGGGACAGAGAAAGGA+AGG 0.538248 3:+85501653 MsaT015321.1:CDS
TCTTAAAATCCCCGACTACA+AGG 0.538794 3:+85502341 MsaT015321.1:CDS
ATTGAAATGCTGCAGCAACT+TGG 0.544165 3:+85501738 MsaT015321.1:CDS
TAGCTGTAACTCTTTCAAAT+GGG 0.544735 3:-85503538 None:intergenic
GGGGAGACTGGACTGGCCAG+AGG 0.544892 3:+85503275 MsaT015321.1:CDS
GGGAGACTGGACTGGCCAGA+GGG 0.546729 3:+85503276 MsaT015321.1:CDS
TCCATGTGATGTTTGGAGTG+TGG 0.550376 3:+85502924 MsaT015321.1:CDS
AAATGGCTAATCATCTCCTA+AGG 0.558733 3:-85503598 None:intergenic
CAACAAAAGTACCTTGTAGT+CGG 0.565973 3:-85502352 None:intergenic
ACCAAGCACCCTCTCCATCA+TGG 0.566879 3:-85503106 None:intergenic
CTAGTGATATTATGTTCTGA+AGG 0.569411 3:-85501167 None:intergenic
CCCACACTCCAAACATCACA+TGG 0.572703 3:-85502925 None:intergenic
AGCATGATAAAGGTGGCAAT+CGG 0.573992 3:+85501763 MsaT015321.1:CDS
TGCTGAGAAGTATGTCCGAA+GGG 0.586380 3:+85503254 MsaT015321.1:CDS
TGGCGAGATGACGACAAAGA+TGG 0.586699 3:+85501230 MsaT015321.1:CDS
AGCATCTTGCCATGATGGAG+AGG 0.588758 3:+85503097 MsaT015321.1:CDS
GGACAGAGAAAGGAAGGAGA+TGG 0.597586 3:+85501659 MsaT015321.1:CDS
ATGCTGAGAAGTATGTCCGA+AGG 0.603891 3:+85503253 MsaT015321.1:CDS
GCATCTTGCCATGATGGAGA+GGG 0.605002 3:+85503098 MsaT015321.1:CDS
AATCGCGCTCTCTTTCTCGG+TGG 0.606061 3:-85500040 None:intergenic
GCCAGAGGGTGCAAATTCCA+GGG 0.606405 3:+85503290 MsaT015321.1:CDS
TGAAAACAAACCTGCAGTCG+AGG 0.611159 3:-85503339 None:intergenic
AATCATGGAGATGGAACGCA+TGG 0.617183 3:+85499988 None:intergenic
GGCTGTGTGTAGGCTCAGGT+AGG 0.618570 3:+85501101 MsaT015321.1:intron
ATGATTACAGATAGAGTCCA+CGG 0.624047 3:+85501594 MsaT015321.1:intron
TTTGTCGTCATCTCGCCATG+GGG 0.644464 3:-85501225 None:intergenic
CTTGGGAAGCATGATAAAGG+TGG 0.653683 3:+85501756 MsaT015321.1:CDS
CTGAGAAGTATGTCCGAAGG+GGG 0.654634 3:+85503256 MsaT015321.1:CDS
ACTCTCTTCAATATCTGCTG+CGG 0.655396 3:-85503135 None:intergenic
GGACATACTTCTCAGCATGT+CGG 0.655396 3:-85503248 None:intergenic
ACAAAAGTACCTTGTAGTCG+GGG 0.673356 3:-85502350 None:intergenic
TGCGATAAAGAAGTATCGAG+AGG 0.676523 3:+85501701 MsaT015321.1:CDS
GCTGAGAAGTATGTCCGAAG+GGG 0.682906 3:+85503255 MsaT015321.1:CDS
TTGTCGTCATCTCGCCATGG+GGG 0.690882 3:-85501224 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 85499992 85503610 85499992 ID=MsaG015321
Chr3 mRNA 85499992 85503610 85499992 ID=MsaT015321.1;Parent=MsaG015321
Chr3 exon 85499992 85500090 85499992 ID=MsaT015321.1.exon1;Parent=MsaT015321.1
Chr3 CDS 85499992 85500090 85499992 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85501113 85501293 85501113 ID=MsaT015321.1.exon2;Parent=MsaT015321.1
Chr3 CDS 85501113 85501293 85501113 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85501604 85501784 85501604 ID=MsaT015321.1.exon3;Parent=MsaT015321.1
Chr3 CDS 85501604 85501784 85501604 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85501879 85501927 85501879 ID=MsaT015321.1.exon4;Parent=MsaT015321.1
Chr3 CDS 85501879 85501927 85501879 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85502018 85502132 85502018 ID=MsaT015321.1.exon5;Parent=MsaT015321.1
Chr3 CDS 85502018 85502132 85502018 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85502271 85502362 85502271 ID=MsaT015321.1.exon6;Parent=MsaT015321.1
Chr3 CDS 85502271 85502362 85502271 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85502611 85502761 85502611 ID=MsaT015321.1.exon7;Parent=MsaT015321.1
Chr3 CDS 85502611 85502761 85502611 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85502908 85502972 85502908 ID=MsaT015321.1.exon8;Parent=MsaT015321.1
Chr3 CDS 85502908 85502972 85502908 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85503063 85503160 85503063 ID=MsaT015321.1.exon9;Parent=MsaT015321.1
Chr3 CDS 85503063 85503160 85503063 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85503248 85503350 85503248 ID=MsaT015321.1.exon10;Parent=MsaT015321.1
Chr3 CDS 85503248 85503350 85503248 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Chr3 exon 85503464 85503610 85503464 ID=MsaT015321.1.exon11;Parent=MsaT015321.1
Chr3 CDS 85503464 85503610 85503464 ID=cds.MsaT015321.1;Parent=MsaT015321.1
Gene Sequence

>MsaT015321.1

ATGGAGATGGAACGCATGGTTGAATTCTCTCGCAATTACATGGATCGCCCACCGAGAAAGAGAGCGCGATTGGGCTGGGATATCCCTGAAACCCCCAAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTATGCTCCTTCAGAACATAATATCACTAGTTCTCTGTTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGAGATGACGACAAAGATGGCCATTACATGTTTGAGCTTGGAGATAATTTAACTTCTCGCTATAGAGTCCACGGAAAAATGGGTGAAGGAACATTTGGACAGGTTTTGGAGTGCTGGGACAGAGAAAGGAAGGAGATGGTTGCCATTAAAGTTGTTCGTGCGATAAAGAAGTATCGAGAGGCAGCCATGATTGAAATTGAAATGCTGCAGCAACTTGGGAAGCATGATAAAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGTTCATTTCCCATTGATCTTGTTCGCGAGATTGGAAGACAACTATTGGAATGTGTTGCATTCATGCATGACTTACACATGATCCATACTGATCTGAAGCCTGAAAACATTCTTCTTGTTTCATCAGAGTATCTTAAAATCCCCGACTACAAGAGTTCATCCAGAGCACCTTGCTCCTTTTACAAAAGAGTGCCCAAGTCAAGTGCTATAAAAGTTATTGATTTTGGCAGCACTACCTATGAACGAGAAAACCAAAATTACATTGTATCAACACGTCATTATAGGGCACCTGAAGTTATCCTTGGACTTGGGTGGAGCTATCCATGTGATGTTTGGAGTGTGGGTTGTATATTAGTCGAATTATGCACTGGTGAAGCTCTGTTTCAGACTCACGAAAATTTAGAGCATCTTGCCATGATGGAGAGGGTGCTTGGTCCGTTACCGCAGCAGATATTGAAGAGAGTTGACCGACATGCTGAGAAGTATGTCCGAAGGGGGAGACTGGACTGGCCAGAGGGTGCAAATTCCAGGGAGAGTATTAAGGCTGTAATGAAGCTTCCTCGACTGCAGAACCTTATAATGCAGCATGTCGATCATTCGGCTGGAGATCTTATACATCTTTTACAGGGGCTACTTAGATATGACCCATTTGAAAGAGTTACAGCTAGAGATGCTCTGAGACATCCATTCTTTATGAGAGATCACCTTAGGAGATGA
Protein sequence

>MsaT015321.1

MEMERMVEFSRNYMDRPPRKRARLGWDIPETPKAQVGLFCGQEVENISSYAPSEHNITSSLFKGVARNGSPPWRDDDKDGHYMFELGDNLTSRYRVHGKMGEGTFGQVLECWDRERKEMVAIKVVRAIKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSEYLKIPDYKSSSRAPCSFYKRVPKSSAIKVIDFGSTTYERENQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQQILKRVDRHAEKYVRRGRLDWPEGANSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERVTARDALRHPFFMRDHLRR*