Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015660 | PNX80937.1 | 91.398 | 93 | 8 | 0 | 1 | 93 | 174 | 266 | 2.00e-54 | 180 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015660 | sp|O22176|WRK15_ARATH | 73.684 | 95 | 20 | 1 | 4 | 93 | 223 | 317 | 2.01e-45 | 151 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015660 | tr|A0A2K3LQZ5|A0A2K3LQZ5_TRIPR | 91.398 | 93 | 8 | 0 | 1 | 93 | 174 | 266 | 9.53e-55 | 180 |
Gene ID | Type | Classification |
---|---|---|
MsaG015660 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015660 | MtrunA17_Chr4g0053281 | 92.473 | 93 | 7 | 0 | 1 | 93 | 246 | 338 | 5.10e-58 | 181 |
MsaG015660 | MtrunA17_Chr5g0401821 | 81.720 | 93 | 17 | 0 | 1 | 93 | 179 | 271 | 2.30e-51 | 162 |
MsaG015660 | MtrunA17_Chr1g0147881 | 65.979 | 97 | 27 | 1 | 3 | 93 | 244 | 340 | 1.40e-41 | 139 |
MsaG015660 | MtrunA17_Chr1g0184691 | 78.667 | 75 | 16 | 0 | 3 | 77 | 275 | 349 | 7.75e-41 | 137 |
MsaG015660 | MtrunA17_Chr4g0071521 | 64.045 | 89 | 32 | 0 | 3 | 91 | 227 | 315 | 4.31e-38 | 129 |
MsaG015660 | MtrunA17_Chr7g0228941 | 61.333 | 75 | 29 | 0 | 3 | 77 | 34 | 108 | 1.44e-30 | 104 |
MsaG015660 | MtrunA17_Chr3g0139021 | 64.384 | 73 | 26 | 0 | 4 | 76 | 297 | 369 | 2.29e-29 | 107 |
MsaG015660 | MtrunA17_Chr8g0379461 | 53.012 | 83 | 32 | 2 | 2 | 77 | 50 | 132 | 1.59e-24 | 92.4 |
MsaG015660 | MtrunA17_Chr2g0284321 | 53.247 | 77 | 35 | 1 | 2 | 77 | 15 | 91 | 2.05e-24 | 91.7 |
MsaG015660 | MtrunA17_Chr2g0293481 | 54.430 | 79 | 31 | 2 | 4 | 77 | 245 | 323 | 2.14e-23 | 92.4 |
MsaG015660 | MtrunA17_Chr2g0319961 | 53.012 | 83 | 33 | 2 | 4 | 80 | 57 | 139 | 8.49e-23 | 88.2 |
MsaG015660 | MtrunA17_Chr7g0270051 | 49.383 | 81 | 37 | 1 | 1 | 77 | 29 | 109 | 1.30e-22 | 87.8 |
MsaG015660 | MtrunA17_Chr7g0248691 | 56.000 | 75 | 28 | 1 | 3 | 77 | 141 | 210 | 5.39e-22 | 87.4 |
MsaG015660 | MtrunA17_Chr8g0348311 | 61.017 | 59 | 23 | 0 | 19 | 77 | 153 | 211 | 1.99e-21 | 85.9 |
MsaG015660 | MtrunA17_Chr2g0289181 | 45.000 | 80 | 43 | 1 | 14 | 93 | 7 | 85 | 1.04e-20 | 82.4 |
MsaG015660 | MtrunA17_Chr1g0202461 | 56.667 | 60 | 26 | 0 | 18 | 77 | 258 | 317 | 1.61e-20 | 84.0 |
MsaG015660 | MtrunA17_Chr3g0101131 | 50.633 | 79 | 38 | 1 | 5 | 83 | 399 | 476 | 2.07e-20 | 84.0 |
MsaG015660 | MtrunA17_Chr7g0249311 | 45.263 | 95 | 48 | 2 | 1 | 92 | 369 | 462 | 4.96e-20 | 82.8 |
MsaG015660 | MtrunA17_Chr5g0445311 | 47.561 | 82 | 42 | 1 | 5 | 86 | 348 | 428 | 9.58e-20 | 82.0 |
MsaG015660 | MtrunA17_Chr7g0249301 | 45.349 | 86 | 43 | 2 | 1 | 83 | 269 | 353 | 1.52e-19 | 81.3 |
MsaG015660 | MtrunA17_Chr7g0249301 | 47.541 | 61 | 30 | 2 | 17 | 77 | 58 | 116 | 9.11e-12 | 59.3 |
MsaG015660 | MtrunA17_Chr4g0001361 | 57.627 | 59 | 25 | 0 | 19 | 77 | 160 | 218 | 2.19e-19 | 80.1 |
MsaG015660 | MtrunA17_Chr7g0263531 | 44.000 | 75 | 41 | 1 | 17 | 91 | 357 | 430 | 3.55e-19 | 80.5 |
MsaG015660 | MtrunA17_Chr7g0263531 | 51.786 | 56 | 25 | 2 | 22 | 77 | 190 | 243 | 1.59e-13 | 64.3 |
MsaG015660 | MtrunA17_Chr3g0079691 | 44.318 | 88 | 45 | 2 | 5 | 89 | 476 | 562 | 5.24e-19 | 80.1 |
MsaG015660 | MtrunA17_Chr7g0218081 | 45.161 | 93 | 47 | 2 | 4 | 93 | 390 | 481 | 7.07e-19 | 79.7 |
MsaG015660 | MtrunA17_Chr7g0218081 | 50.000 | 56 | 26 | 2 | 22 | 77 | 229 | 282 | 3.34e-12 | 60.5 |
MsaG015660 | MtrunA17_Chr5g0432161 | 47.059 | 85 | 41 | 2 | 5 | 86 | 402 | 485 | 8.25e-19 | 79.3 |
MsaG015660 | MtrunA17_Chr5g0432161 | 46.429 | 56 | 28 | 2 | 22 | 77 | 245 | 298 | 4.00e-11 | 57.4 |
MsaG015660 | MtrunA17_Chr3g0106491 | 50.667 | 75 | 33 | 2 | 5 | 76 | 346 | 419 | 1.49e-18 | 78.6 |
MsaG015660 | MtrunA17_Chr3g0106491 | 45.455 | 66 | 34 | 2 | 22 | 87 | 199 | 262 | 2.85e-12 | 60.8 |
MsaG015660 | MtrunA17_Chr4g0004911 | 48.684 | 76 | 35 | 2 | 5 | 77 | 317 | 391 | 2.45e-18 | 78.2 |
MsaG015660 | MtrunA17_Chr4g0004911 | 48.214 | 56 | 28 | 1 | 22 | 77 | 185 | 239 | 2.31e-12 | 61.2 |
MsaG015660 | MtrunA17_Chr4g0074001 | 54.237 | 59 | 26 | 1 | 19 | 77 | 357 | 414 | 4.77e-18 | 77.4 |
MsaG015660 | MtrunA17_Chr5g0418191 | 46.341 | 82 | 40 | 2 | 5 | 83 | 301 | 381 | 6.07e-18 | 77.0 |
MsaG015660 | MtrunA17_Chr5g0418191 | 44.286 | 70 | 37 | 2 | 8 | 77 | 138 | 205 | 4.73e-12 | 60.1 |
MsaG015660 | MtrunA17_Chr3g0136961 | 47.222 | 72 | 31 | 1 | 22 | 86 | 139 | 210 | 9.86e-18 | 75.5 |
MsaG015660 | MtrunA17_Chr1g0150801 | 47.826 | 69 | 35 | 1 | 8 | 76 | 89 | 156 | 1.27e-17 | 72.8 |
MsaG015660 | MtrunA17_Chr4g0042831 | 42.391 | 92 | 49 | 2 | 5 | 93 | 259 | 349 | 1.45e-17 | 75.5 |
MsaG015660 | MtrunA17_Chr2g0333851 | 52.542 | 59 | 28 | 0 | 19 | 77 | 167 | 225 | 2.08e-17 | 74.7 |
MsaG015660 | MtrunA17_Chr8g0387501 | 55.357 | 56 | 25 | 0 | 22 | 77 | 130 | 185 | 2.11e-17 | 74.3 |
MsaG015660 | MtrunA17_Chr4g0051181 | 39.175 | 97 | 40 | 1 | 3 | 80 | 206 | 302 | 3.61e-17 | 74.7 |
MsaG015660 | MtrunA17_Chr2g0288871 | 46.053 | 76 | 41 | 0 | 5 | 80 | 289 | 364 | 4.44e-17 | 74.3 |
MsaG015660 | MtrunA17_Chr3g0099641 | 48.750 | 80 | 39 | 1 | 1 | 80 | 233 | 310 | 6.29e-17 | 73.9 |
MsaG015660 | MtrunA17_Chr7g0270191 | 47.222 | 72 | 37 | 1 | 5 | 76 | 129 | 199 | 8.42e-17 | 72.8 |
MsaG015660 | MtrunA17_Chr1g0150281 | 43.662 | 71 | 40 | 0 | 22 | 92 | 141 | 211 | 1.00e-16 | 72.4 |
MsaG015660 | MtrunA17_Chr4g0075201 | 44.304 | 79 | 44 | 0 | 5 | 83 | 251 | 329 | 1.24e-16 | 73.2 |
MsaG015660 | MtrunA17_Chr7g0243891 | 43.529 | 85 | 44 | 2 | 5 | 86 | 355 | 438 | 1.28e-16 | 73.2 |
MsaG015660 | MtrunA17_Chr2g0322391 | 43.038 | 79 | 45 | 0 | 5 | 83 | 333 | 411 | 1.41e-16 | 73.2 |
MsaG015660 | MtrunA17_Chr8g0335811 | 42.683 | 82 | 39 | 3 | 3 | 79 | 133 | 211 | 3.07e-16 | 70.5 |
MsaG015660 | MtrunA17_Chr7g0216891 | 52.308 | 65 | 30 | 1 | 22 | 85 | 220 | 284 | 3.16e-16 | 72.0 |
MsaG015660 | MtrunA17_Chr7g0270831 | 44.737 | 76 | 42 | 0 | 8 | 83 | 203 | 278 | 3.25e-16 | 72.0 |
MsaG015660 | MtrunA17_Chr4g0060271 | 52.542 | 59 | 28 | 0 | 22 | 80 | 256 | 314 | 4.50e-16 | 71.6 |
MsaG015660 | MtrunA17_Chr1g0150271 | 49.153 | 59 | 30 | 0 | 19 | 77 | 99 | 157 | 7.25e-16 | 69.7 |
MsaG015660 | MtrunA17_Chr8g0383251 | 49.206 | 63 | 31 | 1 | 18 | 80 | 105 | 166 | 1.14e-15 | 68.2 |
MsaG015660 | MtrunA17_Chr4g0051881 | 42.857 | 70 | 39 | 1 | 18 | 87 | 175 | 243 | 1.97e-15 | 69.3 |
MsaG015660 | MtrunA17_Chr5g0447701 | 39.024 | 82 | 49 | 1 | 2 | 83 | 233 | 313 | 2.26e-15 | 69.3 |
MsaG015660 | MtrunA17_Chr2g0302391 | 48.387 | 62 | 32 | 0 | 22 | 83 | 212 | 273 | 2.39e-15 | 69.3 |
MsaG015660 | MtrunA17_Chr5g0443131 | 50.000 | 60 | 29 | 1 | 18 | 77 | 154 | 212 | 2.45e-15 | 68.9 |
MsaG015660 | MtrunA17_Chr2g0294231 | 43.836 | 73 | 40 | 1 | 4 | 76 | 186 | 257 | 4.54e-15 | 68.6 |
MsaG015660 | MtrunA17_Chr7g0238921 | 54.545 | 55 | 24 | 1 | 22 | 76 | 125 | 178 | 5.57e-15 | 68.2 |
MsaG015660 | MtrunA17_Chr4g0025061 | 38.272 | 81 | 41 | 1 | 22 | 93 | 361 | 441 | 7.66e-15 | 68.2 |
MsaG015660 | MtrunA17_Chr8g0383351 | 41.892 | 74 | 38 | 2 | 7 | 76 | 142 | 214 | 9.64e-15 | 66.6 |
MsaG015660 | MtrunA17_Chr4g0068541 | 41.176 | 85 | 48 | 2 | 5 | 88 | 192 | 275 | 2.25e-14 | 66.6 |
MsaG015660 | MtrunA17_Chr3g0129361 | 42.466 | 73 | 38 | 2 | 7 | 76 | 127 | 198 | 2.74e-14 | 65.1 |
MsaG015660 | MtrunA17_Chr3g0129321 | 44.286 | 70 | 38 | 1 | 8 | 77 | 105 | 173 | 2.86e-14 | 65.1 |
MsaG015660 | MtrunA17_Chr1g0194481 | 42.466 | 73 | 41 | 1 | 4 | 76 | 141 | 212 | 3.49e-14 | 65.9 |
MsaG015660 | MtrunA17_Chr3g0126391 | 46.032 | 63 | 32 | 1 | 22 | 82 | 134 | 196 | 5.19e-14 | 65.5 |
MsaG015660 | MtrunA17_Chr5g0418781 | 40.278 | 72 | 42 | 1 | 5 | 76 | 108 | 178 | 7.92e-14 | 64.7 |
MsaG015660 | MtrunA17_Chr1g0188941 | 43.077 | 65 | 36 | 1 | 18 | 82 | 48 | 111 | 2.81e-13 | 60.5 |
MsaG015660 | MtrunA17_Chr7g0224801 | 40.789 | 76 | 43 | 2 | 16 | 90 | 88 | 162 | 6.01e-13 | 60.8 |
MsaG015660 | MtrunA17_Chr4g0025051 | 37.037 | 81 | 42 | 1 | 22 | 93 | 336 | 416 | 6.25e-13 | 62.8 |
MsaG015660 | MtrunA17_Chr7g0275531 | 45.312 | 64 | 33 | 1 | 22 | 83 | 119 | 182 | 1.97e-12 | 61.2 |
MsaG015660 | MtrunA17_Chr7g0248721 | 39.744 | 78 | 42 | 3 | 3 | 77 | 120 | 195 | 2.12e-12 | 60.1 |
MsaG015660 | MtrunA17_Chr1g0189391 | 51.667 | 60 | 27 | 2 | 18 | 76 | 94 | 152 | 3.31e-12 | 60.5 |
MsaG015660 | MtrunA17_Chr8g0387981 | 43.333 | 60 | 32 | 1 | 22 | 79 | 133 | 192 | 1.47e-11 | 58.5 |
MsaG015660 | MtrunA17_Chr5g0402931 | 46.667 | 60 | 29 | 2 | 17 | 76 | 119 | 175 | 2.05e-11 | 57.0 |
MsaG015660 | MtrunA17_Chr8g0347251 | 41.935 | 62 | 34 | 1 | 22 | 81 | 137 | 198 | 2.19e-11 | 58.2 |
MsaG015660 | MtrunA17_Chr6g0485431 | 40.845 | 71 | 40 | 2 | 18 | 87 | 151 | 220 | 3.60e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsaG015660 | AT2G23320.1 | 73.684 | 95 | 20 | 1 | 4 | 93 | 223 | 317 | 2.05e-46 | 151 |
MsaG015660 | AT4G24240.1 | 79.487 | 78 | 16 | 0 | 3 | 80 | 263 | 340 | 7.13e-43 | 142 |
MsaG015660 | AT2G24570.1 | 76.250 | 80 | 19 | 0 | 3 | 82 | 225 | 304 | 2.32e-42 | 140 |
MsaG015660 | AT4G31550.1 | 81.081 | 74 | 14 | 0 | 3 | 76 | 228 | 301 | 4.29e-42 | 140 |
MsaG015660 | AT4G31550.2 | 81.081 | 74 | 14 | 0 | 3 | 76 | 227 | 300 | 4.78e-42 | 140 |
MsaG015660 | AT3G04670.1 | 77.922 | 77 | 17 | 0 | 3 | 79 | 244 | 320 | 2.66e-41 | 138 |
MsaG015660 | AT5G28650.1 | 72.941 | 85 | 21 | 1 | 3 | 85 | 244 | 328 | 9.74e-41 | 136 |
MsaG015660 | AT2G30590.1 | 76.000 | 75 | 18 | 0 | 3 | 77 | 295 | 369 | 4.39e-39 | 133 |
MsaG015660 | AT1G29280.1 | 54.878 | 82 | 31 | 2 | 2 | 77 | 49 | 130 | 3.36e-27 | 100 |
MsaG015660 | AT2G34830.1 | 54.430 | 79 | 31 | 2 | 4 | 77 | 193 | 271 | 3.46e-23 | 91.7 |
MsaG015660 | AT2G34830.2 | 54.430 | 79 | 31 | 2 | 4 | 77 | 202 | 280 | 3.59e-23 | 91.7 |
MsaG015660 | AT3G58710.2 | 46.739 | 92 | 43 | 2 | 2 | 87 | 45 | 136 | 7.71e-23 | 89.0 |
MsaG015660 | AT3G58710.1 | 46.739 | 92 | 43 | 2 | 2 | 87 | 46 | 137 | 8.09e-23 | 89.0 |
MsaG015660 | AT1G30650.1 | 54.430 | 79 | 31 | 2 | 4 | 77 | 195 | 273 | 2.77e-22 | 89.4 |
MsaG015660 | AT4G01250.1 | 52.703 | 74 | 30 | 1 | 4 | 77 | 116 | 184 | 5.18e-21 | 84.7 |
MsaG015660 | AT2G38470.1 | 48.235 | 85 | 40 | 2 | 5 | 86 | 343 | 426 | 5.52e-20 | 83.2 |
MsaG015660 | AT2G38470.1 | 48.214 | 56 | 27 | 2 | 22 | 77 | 185 | 238 | 2.66e-11 | 58.5 |
MsaG015660 | AT4G26640.5 | 47.561 | 82 | 42 | 1 | 5 | 86 | 189 | 269 | 7.98e-20 | 82.4 |
MsaG015660 | AT4G26640.6 | 47.561 | 82 | 42 | 1 | 5 | 86 | 189 | 269 | 7.98e-20 | 82.4 |
MsaG015660 | AT4G26640.4 | 47.561 | 82 | 42 | 1 | 5 | 86 | 189 | 269 | 7.98e-20 | 82.4 |
MsaG015660 | AT4G26640.3 | 47.561 | 82 | 42 | 1 | 5 | 86 | 189 | 269 | 7.98e-20 | 82.4 |
MsaG015660 | AT4G26640.2 | 47.561 | 82 | 42 | 1 | 5 | 86 | 365 | 445 | 1.15e-19 | 82.4 |
MsaG015660 | AT4G26640.7 | 47.561 | 82 | 42 | 1 | 5 | 86 | 325 | 405 | 1.18e-19 | 82.0 |
MsaG015660 | AT4G26640.1 | 47.561 | 82 | 42 | 1 | 5 | 86 | 293 | 373 | 1.20e-19 | 82.0 |
MsaG015660 | AT4G23550.1 | 48.101 | 79 | 37 | 1 | 4 | 82 | 127 | 201 | 2.07e-19 | 80.5 |
MsaG015660 | AT5G26170.1 | 50.000 | 72 | 35 | 1 | 8 | 79 | 100 | 170 | 2.56e-19 | 77.8 |
MsaG015660 | AT2G04880.1 | 50.000 | 70 | 34 | 1 | 8 | 77 | 294 | 362 | 2.69e-19 | 81.3 |
MsaG015660 | AT2G04880.2 | 47.945 | 73 | 37 | 1 | 8 | 80 | 270 | 341 | 2.96e-19 | 80.9 |
MsaG015660 | AT2G23320.2 | 81.579 | 38 | 7 | 0 | 4 | 41 | 223 | 260 | 6.84e-19 | 78.6 |
MsaG015660 | AT5G52830.1 | 55.932 | 59 | 26 | 0 | 18 | 76 | 162 | 220 | 1.01e-18 | 79.0 |
MsaG015660 | AT4G31550.3 | 84.615 | 39 | 6 | 0 | 3 | 41 | 227 | 265 | 1.45e-18 | 77.4 |
MsaG015660 | AT5G56270.1 | 46.341 | 82 | 40 | 2 | 5 | 83 | 468 | 548 | 2.56e-18 | 78.6 |
MsaG015660 | AT5G07100.2 | 48.000 | 75 | 38 | 1 | 8 | 82 | 128 | 201 | 4.19e-18 | 75.5 |
MsaG015660 | AT5G07100.2 | 43.590 | 78 | 31 | 4 | 9 | 77 | 6 | 79 | 1.34e-12 | 60.8 |
MsaG015660 | AT5G07100.4 | 48.000 | 75 | 38 | 1 | 8 | 82 | 128 | 201 | 4.19e-18 | 75.5 |
MsaG015660 | AT5G07100.4 | 43.590 | 78 | 31 | 4 | 9 | 77 | 6 | 79 | 1.34e-12 | 60.8 |
MsaG015660 | AT5G07100.5 | 48.000 | 75 | 38 | 1 | 8 | 82 | 128 | 201 | 4.19e-18 | 75.5 |
MsaG015660 | AT5G07100.5 | 43.590 | 78 | 31 | 4 | 9 | 77 | 6 | 79 | 1.34e-12 | 60.8 |
MsaG015660 | AT5G07100.3 | 48.000 | 75 | 38 | 1 | 8 | 82 | 128 | 201 | 4.19e-18 | 75.5 |
MsaG015660 | AT5G07100.3 | 43.590 | 78 | 31 | 4 | 9 | 77 | 6 | 79 | 1.34e-12 | 60.8 |
MsaG015660 | AT3G01080.2 | 50.000 | 76 | 34 | 2 | 5 | 77 | 325 | 399 | 4.57e-18 | 77.8 |
MsaG015660 | AT3G01080.2 | 50.000 | 56 | 26 | 2 | 22 | 77 | 206 | 259 | 1.32e-12 | 62.0 |
MsaG015660 | AT4G30935.1 | 52.542 | 59 | 27 | 1 | 19 | 77 | 329 | 386 | 4.78e-18 | 77.4 |
MsaG015660 | AT3G01080.1 | 50.000 | 76 | 34 | 2 | 5 | 77 | 287 | 361 | 4.96e-18 | 77.4 |
MsaG015660 | AT3G01080.1 | 50.000 | 56 | 26 | 2 | 22 | 77 | 168 | 221 | 1.68e-12 | 62.0 |
MsaG015660 | AT1G68150.1 | 49.383 | 81 | 32 | 2 | 22 | 93 | 236 | 316 | 5.66e-18 | 77.0 |
MsaG015660 | AT1G13960.1 | 49.367 | 79 | 36 | 2 | 5 | 80 | 390 | 467 | 6.03e-18 | 77.4 |
MsaG015660 | AT1G13960.1 | 51.786 | 56 | 25 | 2 | 22 | 77 | 230 | 283 | 3.25e-13 | 63.9 |
MsaG015660 | AT1G62300.1 | 46.575 | 73 | 39 | 0 | 5 | 77 | 296 | 368 | 7.48e-18 | 77.0 |
MsaG015660 | AT4G04450.2 | 37.755 | 98 | 52 | 1 | 5 | 93 | 182 | 279 | 1.39e-17 | 76.3 |
MsaG015660 | AT4G24240.2 | 79.487 | 39 | 8 | 0 | 3 | 41 | 263 | 301 | 2.31e-17 | 74.7 |
MsaG015660 | AT4G04450.1 | 37.755 | 98 | 52 | 1 | 5 | 93 | 276 | 373 | 2.54e-17 | 75.5 |
MsaG015660 | AT1G80840.1 | 47.143 | 70 | 36 | 1 | 19 | 87 | 144 | 213 | 2.72e-17 | 74.7 |
MsaG015660 | AT3G04670.2 | 74.419 | 43 | 11 | 0 | 3 | 45 | 244 | 286 | 3.37e-17 | 74.3 |
MsaG015660 | AT1G29860.1 | 45.205 | 73 | 39 | 1 | 5 | 77 | 120 | 191 | 6.34e-17 | 73.6 |
MsaG015660 | AT5G07100.1 | 52.308 | 65 | 30 | 1 | 18 | 82 | 231 | 294 | 7.16e-17 | 73.6 |
MsaG015660 | AT5G07100.1 | 49.153 | 59 | 23 | 2 | 22 | 77 | 118 | 172 | 7.72e-12 | 59.7 |
MsaG015660 | AT4G31800.2 | 43.056 | 72 | 41 | 0 | 6 | 77 | 96 | 167 | 7.19e-17 | 72.8 |
MsaG015660 | AT5G45050.2 | 50.000 | 74 | 33 | 1 | 4 | 77 | 1139 | 1208 | 7.58e-17 | 74.3 |
MsaG015660 | AT5G45050.1 | 50.000 | 74 | 33 | 1 | 4 | 77 | 1167 | 1236 | 7.59e-17 | 74.3 |
MsaG015660 | AT1G13960.2 | 49.367 | 79 | 36 | 2 | 5 | 80 | 237 | 314 | 7.65e-17 | 73.9 |
MsaG015660 | AT1G13960.2 | 51.786 | 56 | 25 | 2 | 22 | 77 | 77 | 130 | 4.07e-12 | 60.8 |
MsaG015660 | AT5G45050.4 | 50.000 | 74 | 33 | 1 | 4 | 77 | 1028 | 1097 | 8.42e-17 | 74.3 |
MsaG015660 | AT4G22070.4 | 46.053 | 76 | 41 | 0 | 5 | 80 | 281 | 356 | 1.16e-16 | 73.6 |
MsaG015660 | AT4G22070.3 | 46.053 | 76 | 41 | 0 | 5 | 80 | 281 | 356 | 1.16e-16 | 73.6 |
MsaG015660 | AT4G22070.2 | 46.053 | 76 | 41 | 0 | 5 | 80 | 281 | 356 | 1.16e-16 | 73.6 |
MsaG015660 | AT4G22070.1 | 46.053 | 76 | 41 | 0 | 5 | 80 | 281 | 356 | 1.16e-16 | 73.6 |
MsaG015660 | AT2G03340.1 | 45.349 | 86 | 43 | 2 | 5 | 87 | 396 | 480 | 2.11e-16 | 72.8 |
MsaG015660 | AT2G03340.1 | 45.833 | 72 | 36 | 3 | 17 | 87 | 245 | 314 | 8.83e-12 | 59.7 |
MsaG015660 | AT5G15130.2 | 54.237 | 59 | 27 | 0 | 22 | 80 | 186 | 244 | 2.22e-16 | 72.8 |
MsaG015660 | AT5G15130.1 | 54.237 | 59 | 27 | 0 | 22 | 80 | 228 | 286 | 2.33e-16 | 72.8 |
MsaG015660 | AT4G18170.1 | 40.506 | 79 | 46 | 1 | 4 | 82 | 155 | 232 | 3.66e-16 | 71.6 |
MsaG015660 | AT1G55600.1 | 46.053 | 76 | 37 | 2 | 5 | 77 | 288 | 362 | 4.27e-16 | 72.0 |
MsaG015660 | AT5G49520.1 | 45.833 | 72 | 38 | 1 | 5 | 76 | 205 | 275 | 4.41e-16 | 72.0 |
MsaG015660 | AT2G44745.1 | 42.500 | 80 | 38 | 3 | 3 | 77 | 124 | 200 | 4.72e-16 | 70.1 |
MsaG015660 | AT2G37260.1 | 47.436 | 78 | 38 | 2 | 17 | 92 | 345 | 421 | 4.87e-16 | 72.0 |
MsaG015660 | AT2G37260.1 | 50.000 | 58 | 27 | 2 | 22 | 79 | 166 | 221 | 6.65e-12 | 60.1 |
MsaG015660 | AT2G37260.2 | 47.436 | 78 | 38 | 2 | 17 | 92 | 263 | 339 | 5.11e-16 | 71.6 |
MsaG015660 | AT2G37260.2 | 48.276 | 58 | 28 | 2 | 22 | 79 | 84 | 139 | 9.01e-12 | 59.7 |
MsaG015660 | AT4G26440.1 | 46.667 | 75 | 36 | 2 | 5 | 76 | 353 | 426 | 5.34e-16 | 71.6 |
MsaG015660 | AT2G37260.3 | 47.436 | 78 | 38 | 2 | 17 | 92 | 265 | 341 | 5.37e-16 | 71.6 |
MsaG015660 | AT2G37260.3 | 48.276 | 58 | 28 | 2 | 22 | 79 | 86 | 141 | 9.31e-12 | 59.7 |
MsaG015660 | AT4G31800.1 | 43.662 | 71 | 40 | 0 | 7 | 77 | 162 | 232 | 1.26e-15 | 70.1 |
MsaG015660 | AT4G01720.1 | 44.737 | 76 | 42 | 0 | 5 | 80 | 223 | 298 | 1.31e-15 | 70.9 |
MsaG015660 | AT2G40740.3 | 44.578 | 83 | 43 | 2 | 4 | 83 | 164 | 246 | 1.98e-15 | 69.7 |
MsaG015660 | AT2G40740.1 | 44.578 | 83 | 43 | 2 | 4 | 83 | 155 | 237 | 2.05e-15 | 69.3 |
MsaG015660 | AT1G18860.1 | 40.964 | 83 | 46 | 1 | 1 | 80 | 216 | 298 | 2.16e-15 | 70.1 |
MsaG015660 | AT1G69310.4 | 44.444 | 72 | 39 | 1 | 5 | 76 | 131 | 201 | 3.59e-15 | 68.9 |
MsaG015660 | AT1G69310.2 | 44.444 | 72 | 39 | 1 | 5 | 76 | 131 | 201 | 3.59e-15 | 68.9 |
MsaG015660 | AT1G69310.1 | 44.444 | 72 | 39 | 1 | 5 | 76 | 131 | 201 | 3.59e-15 | 68.9 |
MsaG015660 | AT5G45260.1 | 45.455 | 77 | 34 | 2 | 3 | 77 | 1196 | 1266 | 4.79e-15 | 69.3 |
MsaG015660 | AT2G25000.2 | 50.000 | 56 | 28 | 0 | 22 | 77 | 104 | 159 | 8.30e-15 | 67.0 |
MsaG015660 | AT2G25000.4 | 50.000 | 56 | 28 | 0 | 22 | 77 | 104 | 159 | 8.30e-15 | 67.0 |
MsaG015660 | AT2G47260.1 | 43.836 | 73 | 40 | 1 | 4 | 76 | 157 | 228 | 9.94e-15 | 67.8 |
MsaG015660 | AT5G43290.1 | 47.222 | 72 | 32 | 3 | 6 | 76 | 102 | 168 | 1.11e-14 | 67.4 |
MsaG015660 | AT4G39410.1 | 43.421 | 76 | 39 | 2 | 4 | 76 | 203 | 277 | 1.18e-14 | 67.4 |
MsaG015660 | AT3G62340.1 | 43.836 | 73 | 40 | 1 | 4 | 76 | 101 | 172 | 1.40e-14 | 67.0 |
MsaG015660 | AT2G25000.3 | 50.000 | 56 | 28 | 0 | 22 | 77 | 126 | 181 | 1.52e-14 | 66.6 |
MsaG015660 | AT2G25000.1 | 50.000 | 56 | 28 | 0 | 22 | 77 | 147 | 202 | 1.77e-14 | 66.6 |
MsaG015660 | AT5G46350.1 | 40.000 | 75 | 44 | 1 | 8 | 82 | 170 | 243 | 1.93e-14 | 67.0 |
MsaG015660 | AT5G64810.1 | 40.476 | 84 | 48 | 2 | 8 | 90 | 97 | 179 | 1.99e-14 | 65.5 |
MsaG015660 | AT2G30250.1 | 42.105 | 76 | 43 | 1 | 8 | 83 | 315 | 389 | 3.49e-14 | 66.6 |
MsaG015660 | AT5G41570.1 | 41.558 | 77 | 41 | 2 | 4 | 77 | 78 | 153 | 6.55e-14 | 63.9 |
MsaG015660 | AT3G01970.1 | 43.077 | 65 | 36 | 1 | 16 | 80 | 60 | 123 | 1.10e-13 | 62.8 |
MsaG015660 | AT1G64000.1 | 45.000 | 60 | 32 | 1 | 18 | 77 | 111 | 169 | 1.39e-13 | 63.2 |
MsaG015660 | AT2G46130.1 | 45.902 | 61 | 32 | 1 | 17 | 77 | 26 | 85 | 3.31e-13 | 60.5 |
MsaG015660 | AT2G21900.1 | 50.000 | 56 | 27 | 1 | 22 | 77 | 110 | 164 | 7.77e-13 | 61.6 |
MsaG015660 | AT5G13080.1 | 37.179 | 78 | 46 | 2 | 16 | 91 | 62 | 138 | 1.17e-12 | 60.1 |
MsaG015660 | AT3G01080.3 | 50.000 | 56 | 26 | 2 | 22 | 77 | 206 | 259 | 1.18e-12 | 62.0 |
MsaG015660 | AT5G24110.1 | 44.615 | 65 | 33 | 2 | 18 | 79 | 109 | 173 | 8.91e-11 | 56.6 |
Find 21 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATGAGGTGAACCTTTAA+TGG | 0.228013 | 3:+89574272 | None:intergenic |
TGATATTGAAAAGGGTTGTT+AGG | 0.256169 | 3:-89574368 | MsaT015660.1:CDS |
CGCTCTACATGCTTTCTTGC+TGG | 0.297065 | 3:+89573898 | None:intergenic |
TTACACCAGATGATTATTCT+TGG | 0.297422 | 3:-89574314 | MsaT015660.1:CDS |
GATTATTCTTGGAGAAAATA+TGG | 0.308918 | 3:-89574303 | MsaT015660.1:CDS |
TATGGTCAGAAACCCATTAA+AGG | 0.330566 | 3:-89574285 | MsaT015660.1:CDS |
GCCATCTTCAAGCTAATTGC+AGG | 0.382493 | 3:+89574342 | None:intergenic |
GATATTGAAAAGGGTTGTTA+GGG | 0.397103 | 3:-89574367 | MsaT015660.1:CDS |
GGATGAGGTGAACCTTTAAT+GGG | 0.399396 | 3:+89574273 | None:intergenic |
GTAGGAAAATGATATTGAAA+AGG | 0.434420 | 3:-89574377 | None:intergenic |
TTTCTCCAAGAATAATCATC+TGG | 0.457317 | 3:+89574309 | None:intergenic |
TGCTAGCATCAGCTGTAGAA+AGG | 0.471465 | 3:+89573818 | None:intergenic |
TCCTGCAATTAGCTTGAAGA+TGG | 0.484264 | 3:-89574343 | MsaT015660.1:CDS |
TTCAAGTGCAATAGTGTGAG+AGG | 0.486384 | 3:-89573925 | MsaT015660.1:CDS |
TAGGAAAATGATATTGAAAA+GGG | 0.502456 | 3:-89574376 | None:intergenic |
TCTTGATGATGCTTCTATGC+TGG | 0.531866 | 3:-89573872 | MsaT015660.1:CDS |
GCTAGCATCAGCTGTAGAAA+GGG | 0.540685 | 3:+89573819 | None:intergenic |
ATGCTGGTAGTTACATATGA+AGG | 0.554111 | 3:-89573856 | MsaT015660.1:CDS |
AATTGAAAGTACCTTGGATG+AGG | 0.611960 | 3:+89574258 | None:intergenic |
TTAAAGGTTCACCTCATCCA+AGG | 0.614226 | 3:-89574269 | MsaT015660.1:intron |
TCAAGTGCAATAGTGTGAGA+GGG | 0.654654 | 3:-89573924 | MsaT015660.1:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 89573795 | 89574391 | 89573795 | ID=MsaG015660 |
Chr3 | mRNA | 89573795 | 89574391 | 89573795 | ID=MsaT015660.1;Parent=MsaG015660 |
Chr3 | exon | 89573795 | 89573954 | 89573795 | ID=MsaT015660.1.exon2;Parent=MsaT015660.1 |
Chr3 | CDS | 89573795 | 89573954 | 89573795 | ID=cds.MsaT015660.1;Parent=MsaT015660.1 |
Chr3 | exon | 89574270 | 89574391 | 89574270 | ID=MsaT015660.1.exon1;Parent=MsaT015660.1 |
Chr3 | CDS | 89574270 | 89574391 | 89574270 | ID=cds.MsaT015660.1;Parent=MsaT015660.1 |
Gene Sequence |
Protein sequence |