AlfalfaGEDB | MsaG015832

M. sativa ssp. caerulea / MsaG015832

KEGG: -
GO: -
PFAM: PF01936.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG015832	XP_039687536.1	90.885	373	18	3	1	371	53	411	0.0	664

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG015832	tr\|A0A072V0L1\|A0A072V0L1_MEDTR	90.885	373	18	3	1	371	53	411	0.0	664

TFs/TRs:

Gene ID	Type	Classification
MsaG015832	TF	C2H2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG015832	0.870039	4.008457e-66	4.653126e-63
MsaG000325	MsaG015832	0.814678	2.356308e-51	4.518031e-49
MsaG000419	MsaG015832	0.800128	2.785311e-48	3.776665e-46
MsaG001730	MsaG015832	0.812373	7.528687e-51	1.362675e-48
MsaG001810	MsaG015832	0.825895	6.494066e-54	1.674581e-51
MsaG002481	MsaG015832	0.856489	6.034310e-62	4.115681e-59
MsaG003329	MsaG015832	0.823761	2.058181e-53	5.005692e-51
MsaG003422	MsaG015832	0.871258	1.600485e-66	1.956197e-63
MsaG003470	MsaG015832	0.813866	3.554829e-51	6.678807e-49
MsaG004096	MsaG015832	0.830979	3.899872e-55	1.160729e-52
MsaG004092	MsaG015832	0.810181	2.239435e-50	3.841141e-48
MsaG004280	MsaG015832	0.806847	1.143981e-49	1.811149e-47
MsaG004500	MsaG015832	0.805210	2.519047e-49	3.837719e-47
MsaG004718	MsaG015832	0.828098	1.941622e-54	5.324195e-52
MsaG004775	MsaG015832	0.810660	1.766818e-50	3.066116e-48
MsaG004887	MsaG015832	0.825567	7.762044e-54	1.983253e-51
MsaG005100	MsaG015832	0.826191	5.527779e-54	1.437104e-51
MsaG005496	MsaG015832	0.816455	9.516053e-52	1.908728e-49
MsaG005497	MsaG015832	0.861815	1.554783e-63	1.295457e-60
MsaG005722	MsaG015832	0.821174	8.159352e-53	1.851201e-50
MsaG006555	MsaG015832	0.815378	1.650469e-51	3.221225e-49
MsaG006657	MsaG015832	0.814796	2.219026e-51	4.267613e-49
MsaG006765	MsaG015832	0.803190	6.601501e-49	9.597497e-47
MsaG006855	MsaG015832	0.802629	8.610360e-49	1.235736e-46
MsaG007734	MsaG015832	0.821288	7.681806e-53	1.748110e-50
MsaG008495	MsaG015832	0.843461	2.577432e-58	1.123259e-55
MsaG009289	MsaG015832	0.824088	1.726209e-53	4.235578e-51
MsaG009389	MsaG015832	0.877717	1.050578e-68	1.706752e-65
MsaG009648	MsaG015832	0.821854	5.694149e-53	1.315354e-50
MsaG010104	MsaG015832	0.809630	2.938584e-50	4.973661e-48
MsaG010706	MsaG015832	0.843806	2.087000e-58	9.195890e-56
MsaG010902	MsaG015832	0.815353	1.672100e-51	3.261307e-49
MsaG011244	MsaG015832	0.832451	1.696969e-55	5.271746e-53
MsaG011217	MsaG015832	0.856993	4.297189e-62	2.984575e-59
MsaG011917	MsaG015832	0.811516	1.155223e-50	2.047207e-48
MsaG012046	MsaG015832	0.803783	4.982097e-49	7.342831e-47
MsaG012586	MsaG015832	0.803361	6.087361e-49	8.884819e-47
MsaG015018	MsaG015832	0.825054	1.024665e-53	2.581421e-51
MsaG015445	MsaG015832	0.827146	3.277968e-54	8.751735e-52
MsaG015829	MsaG015832	0.866128	7.171711e-65	7.088344e-62
MsaG015832	MsaG016207	0.813174	5.037035e-51	9.300738e-49
MsaG015832	MsaG016273	0.833299	1.047259e-55	3.335118e-53
MsaG015832	MsaG016436	0.823778	2.039029e-53	4.961420e-51
MsaG015832	MsaG016506	0.802196	1.056160e-48	1.500795e-46
MsaG015832	MsaG016517	0.832893	1.320521e-55	4.155458e-53
MsaG015832	MsaG016866	0.829436	9.247786e-55	2.633490e-52
MsaG015832	MsaG017303	0.801096	1.771344e-48	2.454932e-46
MsaG015832	MsaG017183	0.838176	6.175029e-57	2.277092e-54
MsaG015832	MsaG017219	0.813912	3.473595e-51	6.533648e-49
MsaG015832	MsaG017286	0.808258	5.760686e-50	9.433036e-48
MsaG015832	MsaG017495	0.864789	1.884682e-64	1.765671e-61
MsaG015832	MsaG017827	0.800662	2.170132e-48	2.978460e-46
MsaG015832	MsaG018333	0.829934	7.006133e-55	2.023822e-52
MsaG015832	MsaG018598	0.866432	5.749035e-65	5.751946e-62
MsaG015832	MsaG018750	0.831099	3.645752e-55	1.088849e-52
MsaG015832	MsaG019237	0.845009	9.943756e-59	4.558323e-56
MsaG015832	MsaG019308	0.813084	5.271530e-51	9.711794e-49
MsaG015832	MsaG020215	0.836380	1.770676e-56	6.182065e-54
MsaG015832	MsaG020288	0.805913	1.796061e-49	2.781546e-47
MsaG015832	MsaG020407	0.832350	1.797847e-55	5.568623e-53
MsaG015832	MsaG020492	0.807913	6.814301e-50	1.106659e-47
MsaG015832	MsaG020834	0.809147	3.727351e-50	6.235531e-48
MsaG015832	MsaG021200	0.832107	2.063666e-55	6.347555e-53
MsaG015832	MsaG021395	0.801456	1.496534e-48	2.091065e-46
MsaG015832	MsaG021650	0.825045	1.029952e-53	2.594069e-51
MsaG015832	MsaG021720	0.851933	1.230328e-60	7.130551e-58
MsaG015832	MsaG022325	0.834677	4.751105e-56	1.576207e-53
MsaG015832	MsaG022750	0.814914	2.090760e-51	4.032817e-49
MsaG015832	MsaG023416	0.807845	7.045220e-50	1.142259e-47
MsaG015832	MsaG023796	0.804718	3.188826e-49	4.802853e-47
MsaG015832	MsaG023959	0.813392	4.515098e-51	8.382529e-49
MsaG015832	MsaG024040	0.813314	4.695929e-51	8.700928e-49
MsaG015832	MsaG024295	0.829069	1.134151e-54	3.195987e-52
MsaG015832	MsaG024958	0.804755	3.132366e-49	4.722002e-47
MsaG015832	MsaG025736	0.824068	1.744398e-53	4.277950e-51
MsaG015832	MsaG025740	0.841522	8.377240e-58	3.431165e-55
MsaG015832	MsaG026192	0.821134	8.334839e-53	1.888996e-50
MsaG015832	MsaG026830	0.847171	2.582520e-59	1.271935e-56
MsaG015832	MsaG026831	0.861616	1.787408e-63	1.477927e-60
MsaG015832	MsaG026987	0.831336	3.189060e-55	9.590183e-53
MsaG015832	MsaG027376	0.823024	3.054433e-53	7.281501e-51
MsaG015832	MsaG027395	0.843393	2.687454e-58	1.168600e-55
MsaG015832	MsaG027919	0.852508	8.454578e-61	4.999116e-58
MsaG015832	MsaG027988	0.838389	5.444680e-57	2.020967e-54
MsaG015832	MsaG028324	0.806963	1.081770e-49	1.717347e-47
MsaG015832	MsaG028338	0.804553	3.449469e-49	5.175682e-47
MsaG015832	MsaG028679	0.813896	3.500597e-51	6.581910e-49
MsaG015832	MsaG029035	0.801726	1.317968e-48	1.852897e-46
MsaG015832	MsaG029063	0.810630	1.793599e-50	3.110320e-48
MsaG015832	MsaG029307	0.803968	4.561129e-49	6.751478e-47
MsaG015832	MsaG029919	0.802917	7.513903e-49	1.085487e-46
MsaG015832	MsaG030039	0.801083	1.782203e-48	2.469224e-46
MsaG015832	MsaG030590	0.828617	1.457130e-54	4.054355e-52
MsaG015832	MsaG030841	0.816318	1.020781e-51	2.040382e-49
MsaG015832	MsaG032064	0.808271	5.723993e-50	9.375969e-48
MsaG015832	MsaG032373	0.863175	5.960312e-64	5.237690e-61
MsaG015832	MsaG032915	0.814860	2.148711e-51	4.139002e-49
MsaG015832	MsaG033775	0.803268	6.363131e-49	9.267261e-47
MsaG015832	MsaG033818	0.847892	1.639380e-59	8.272560e-57
MsaG015832	MsaG033986	0.813116	5.188058e-51	9.565495e-49
MsaG015832	MsaG034835	0.804921	2.892425e-49	4.377120e-47
MsaG015832	MsaG035162	0.812040	8.893240e-51	1.596427e-48
MsaG015832	MsaG036025	0.807048	1.038032e-49	1.651219e-47
MsaG015832	MsaG036697	0.820550	1.133980e-52	2.530590e-50
MsaG015832	MsaG039178	0.818336	3.605225e-52	7.590396e-50
MsaG015832	MsaG040269	0.855901	8.960588e-62	5.980467e-59
MsaG015832	MsaG042283	0.801547	1.433737e-48	2.007441e-46
MsaG015832	MsaG042782	0.832665	1.503021e-55	4.698234e-53
MsaG015832	MsaG043788	0.838587	4.842558e-57	1.808724e-54
MsaG015832	MsaG044107	0.840009	2.078648e-57	8.117213e-55
MsaG015832	MsaG044208	0.801248	1.649400e-48	2.293793e-46
MsaG015832	MsaG044278	0.808268	5.730160e-50	9.385570e-48
MsaG015832	MsaG044436	0.806505	1.349915e-49	2.120156e-47
MsaG015832	MsaG044546	0.801874	1.229371e-48	1.734181e-46
MsaG015832	MsaG044889	0.809145	3.729495e-50	6.238972e-48
MsaG015832	MsaG045822	0.804738	3.157826e-49	4.758388e-47
MsaG015832	MsaG045986	0.817170	6.587484e-52	1.345925e-49
MsaG015832	MsaG046540	0.841068	1.101697e-57	4.447769e-55
MsaG015832	MsaG046497	0.829723	7.880864e-55	2.262772e-52
MsaG015832	MsaG046660	0.873973	2.001593e-67	2.752330e-64
MsaG015832	MsaG046730	0.830683	4.605616e-55	1.359133e-52
MsaG015832	MsaG046972	0.879139	3.344384e-69	5.801685e-66
MsaG015832	MsaG047011	0.804824	3.031080e-49	4.576570e-47
MsaG015832	MsaG047069	0.858066	2.075100e-62	1.499980e-59
MsaG015832	MsaG004665	0.818365	3.551452e-52	7.482872e-50
MsaG015832	MsaG001966	0.856031	8.211089e-62	5.506636e-59
MsaG015832	MsaG002000	0.852606	7.930323e-61	4.705589e-58
MsaG015832	MsaG001807	0.845733	6.344635e-59	2.978529e-56
MsaG015832	MsaG002578	0.801860	1.237528e-48	1.745126e-46
MsaG015832	MsaG001893	0.834067	6.745287e-56	2.197180e-53
MsaG015832	MsaG009513	0.840765	1.321940e-57	5.285722e-55
MsaG015832	MsaG014278	0.818323	3.630372e-52	7.640663e-50
MsaG015832	MsaG013546	0.833024	1.225367e-55	3.870773e-53
MsaG015832	MsaG014164	0.801912	1.207391e-48	1.704654e-46
MsaG015832	MsaG011874	0.831982	2.214707e-55	6.787294e-53
MsaG015832	MsaG012272	0.803116	6.838485e-49	9.924823e-47
MsaG015832	MsaG013252	0.837458	9.422750e-57	3.399106e-54
MsaG015832	MsaG017934	0.849226	7.030683e-60	3.711475e-57
MsaG015832	MsaG019407	0.813806	3.663330e-51	6.872439e-49
MsaG015832	MsaG023445	0.842657	4.210828e-58	1.788427e-55
MsaG015832	MsaG019817	0.805609	2.079120e-49	3.197035e-47
MsaG015832	MsaG028734	0.864734	1.961122e-64	1.833224e-61
MsaG015832	MsaG028782	0.801941	1.191463e-48	1.683239e-46
MsaG015832	MsaG030607	0.825875	6.564108e-54	1.691694e-51
MsaG015832	MsaG030007	0.802988	7.265238e-49	1.051312e-46
MsaG015832	MsaG033319	0.805684	2.005890e-49	3.089839e-47
MsaG015832	MsaG031246	0.816350	1.004126e-51	2.008739e-49
MsaG015832	MsaG037798	0.822234	4.651868e-53	1.085577e-50
MsaG015832	MsaG039696	0.828820	1.302422e-54	3.644360e-52
MsaG015832	MsaG039788	0.830171	6.135227e-55	1.784282e-52
MsaG015832	MsaG036661	0.826820	3.918511e-54	1.036711e-51
MsaG015832	MsaG036651	0.845466	7.489532e-59	3.484903e-56
MsaG015832	MsaG037725	0.841448	8.762177e-58	3.580219e-55
MsaG015832	MsaG038853	0.811175	1.368334e-50	2.404745e-48
MsaG015832	MsaG034912	0.813117	5.185198e-51	9.560540e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG015832	MtrunA17_Chr3g0122091	90.885	373	18	3	1	371	53	411	0.0	664
MsaG015832	MtrunA17_Chr1g0151261	46.185	249	130	3	44	292	50	294	2.67e-63	206
MsaG015832	MtrunA17_Chr1g0153141	33.203	256	138	8	37	284	43	273	1.42e-26	107

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG015832	AT4G12240.1	56.977	344	126	5	38	371	30	361	3.51e-135	390
MsaG015832	AT5G52010.1	46.400	250	128	4	42	291	71	314	6.52e-63	206

Find 91 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCAGCTATTCTGAGCTTAT+TGG	0.177466	3:-91455036	None:intergenic
AGCTGAAACGGGCAGGGTTT+TGG	0.228799	3:+91455432	MsaT015832.1:CDS
TATGTAGAGTAGGGCTGTTC+TGG	0.246065	3:+91454967	MsaT015832.1:CDS
AGAATAGCTGCAGCTTCTTT+TGG	0.246225	3:+91455047	MsaT015832.1:CDS
TGTCTCAAGACTGTTGTTAT+TGG	0.251511	3:+91455605	MsaT015832.1:CDS
GTCTCAAGACTGTTGTTATT+GGG	0.278322	3:+91455606	MsaT015832.1:CDS
AGGGAGTAGAAAGGTGAAAT+TGG	0.313386	3:+91455322	MsaT015832.1:CDS
TGAGACGACACTGTCATTCT+TGG	0.314624	3:+91454904	MsaT015832.1:CDS
GAGACGACACTGTCATTCTT+GGG	0.319372	3:+91454905	MsaT015832.1:CDS
GGGTAAGTATGCTATGAAAA+TGG	0.326589	3:+91455346	MsaT015832.1:CDS
TTCATAAGGTGGGATTGAAT+TGG	0.333130	3:-91455009	None:intergenic
TTGGGGTCACGGAAGGATTT+CGG	0.339709	3:+91454923	MsaT015832.1:CDS
TCATAGGCGGGTTGAGTGTT+TGG	0.351038	3:+91455526	MsaT015832.1:CDS
AGCTTATTGGCAACTTCATA+AGG	0.365446	3:-91455023	None:intergenic
ACAGGAACTGTTGTATCGTT+TGG	0.373770	3:+91455151	MsaT015832.1:CDS
CTGTATCGGTTGTGGAAAAC+TGG	0.377175	3:+91455717	MsaT015832.1:CDS
GTTGTATCGTTTGGAGGATA+AGG	0.381598	3:+91455160	MsaT015832.1:CDS
CTCATGTTTGTCGTGTTTGT+GGG	0.391232	3:+91455204	MsaT015832.1:CDS
GGGTTCAAACTGTGTTAGAT+AGG	0.398462	3:+91455453	MsaT015832.1:CDS
CCTCATGTTTGTCGTGTTTG+TGG	0.413883	3:+91455203	MsaT015832.1:CDS
GCCAAACCATACCCAACTTT+AGG	0.418960	3:-91455404	None:intergenic
TCCTAAAGTTGGGTATGGTT+TGG	0.425982	3:+91455403	MsaT015832.1:CDS
TTGACTCCTAAAGTTGGGTA+TGG	0.429889	3:+91455398	MsaT015832.1:CDS
TCATAAGGTGGGATTGAATT+GGG	0.443856	3:-91455008	None:intergenic
TTTGATGGGGAAGGCGAAGA+AGG	0.453176	3:+91455691	MsaT015832.1:CDS
GATGCAGTTCCTAAAACATC+TGG	0.457052	3:+91455815	MsaT015832.1:CDS
AAATTAGACTCCGATGATAA+TGG	0.457209	3:+91455908	MsaT015832.1:CDS
TTGTATCGTTTGGAGGATAA+GGG	0.462961	3:+91455161	MsaT015832.1:CDS
GCTGATGAGCTGAAACGGGC+AGG	0.464292	3:+91455425	MsaT015832.1:CDS
TGGTGGATATGATGGATCAT+AGG	0.472905	3:+91455510	MsaT015832.1:CDS
TCGTGATATATTGAAAAGAT+TGG	0.474466	3:+91455745	MsaT015832.1:CDS
ATTGCTAAAAGTGTGGCTAT+TGG	0.475645	3:-91455096	None:intergenic
TGAGTGTTTGGTTCTTGTAT+CGG	0.489683	3:+91455538	MsaT015832.1:CDS
TCTCAAGACTGTTGTTATTG+GGG	0.494985	3:+91455607	MsaT015832.1:CDS
TATTGCATTGCAAAAGCATA+TGG	0.499781	3:+91455490	MsaT015832.1:CDS
CACTGTCATTCTTGGGGTCA+CGG	0.505218	3:+91454912	MsaT015832.1:CDS
ACTCTACATAGCTTCTCATT+CGG	0.506498	3:-91454954	None:intergenic
GAAGGAGGCTGTATCGGTTG+TGG	0.514904	3:+91455709	MsaT015832.1:CDS
GCAGTGATGGAGTCTTGAAA+AGG	0.516098	3:+91455636	MsaT015832.1:CDS
ATGTAGAGTAGGGCTGTTCT+GGG	0.518539	3:+91454968	MsaT015832.1:CDS
GTTTGGCTGATGAGCTGAAA+CGG	0.521781	3:+91455420	MsaT015832.1:CDS
GGCGAAGAAGGAGGCTGTAT+CGG	0.522314	3:+91455703	MsaT015832.1:CDS
AAAGCATATGGTGGATATGA+TGG	0.523680	3:+91455502	MsaT015832.1:CDS
GTCATTCTTGGGGTCACGGA+AGG	0.525218	3:+91454916	MsaT015832.1:CDS
GGAACTGTTGTATCGTTTGG+AGG	0.537669	3:+91455154	MsaT015832.1:CDS
GAAAATGGAAAAGTATAAGA+AGG	0.542297	3:+91455361	MsaT015832.1:CDS
TCGTGAGAGGAGGAAAGAAC+AGG	0.542932	3:+91455133	MsaT015832.1:CDS
CTCCTCTCACGAACAACGTG+GGG	0.546733	3:-91455122	None:intergenic
AATGAGAAGCTATGTAGAGT+AGG	0.549536	3:+91454957	MsaT015832.1:CDS
AAGGCGGAATCAGATAGAAT+CGG	0.553848	3:+91455295	MsaT015832.1:CDS
TATTGGCAACTTCATAAGGT+GGG	0.553988	3:-91455019	None:intergenic
CTATTGTGTAGAATATTCTA+CGG	0.555084	3:-91454851	None:intergenic
TTTGGCTGATGAGCTGAAAC+GGG	0.555204	3:+91455421	MsaT015832.1:CDS
ACAAGGATGACAGAGGTCCT+TGG	0.556458	3:+91455882	MsaT015832.1:CDS
TGGAGTTGTTCGACATATGG+TGG	0.559762	3:+91455067	MsaT015832.1:CDS
ATGAGAAGCTATGTAGAGTA+GGG	0.561703	3:+91454958	MsaT015832.1:CDS
CTGATGAGCTGAAACGGGCA+GGG	0.566688	3:+91455426	MsaT015832.1:CDS
ATCGGCTAGAGGGAGTAGAA+AGG	0.569230	3:+91455313	MsaT015832.1:CDS
AGAATATTCTACGGAACTTG+AGG	0.572133	3:-91454842	None:intergenic
GGATATGATGGATCATAGGC+GGG	0.572337	3:+91455514	MsaT015832.1:CDS
GAGTAGAAAGGTGAAATTGG+TGG	0.573655	3:+91455325	MsaT015832.1:CDS
ATCAGATAGAATCGGCTAGA+GGG	0.575206	3:+91455303	MsaT015832.1:CDS
ATTTGCAACACCATTATCAT+CGG	0.578456	3:-91455918	None:intergenic
ATGAGCGTGAGCATGCGAAA+AGG	0.580807	3:+91455276	MsaT015832.1:CDS
TAAGGTGGGATTGAATTGGG+TGG	0.598304	3:-91455005	None:intergenic
TCCTCCTCTCACGAACAACG+TGG	0.601028	3:-91455124	None:intergenic
AACAAATGTTTGAATGCCAG+TGG	0.602266	3:-91454877	None:intergenic
AGAATGACAGTGTCGTCTCA+AGG	0.604787	3:-91454901	None:intergenic
CCCACGTTGTTCGTGAGAGG+AGG	0.604916	3:+91455123	MsaT015832.1:CDS
AATGCAATATCCGCAGCTTG+CGG	0.606975	3:-91455476	None:intergenic
AGACGACACTGTCATTCTTG+GGG	0.607766	3:+91454906	MsaT015832.1:CDS
AGTAGAAAGGTGAAATTGGT+GGG	0.609374	3:+91455326	MsaT015832.1:CDS
TGCATTGCAAAAGCATATGG+TGG	0.610349	3:+91455493	MsaT015832.1:CDS
TTCTACACAATAGAAGCCAC+TGG	0.610989	3:+91454861	MsaT015832.1:CDS
GTGGACATATAACCCAGAAG+TGG	0.612100	3:+91455769	MsaT015832.1:CDS
TTATTGGCAACTTCATAAGG+TGG	0.612373	3:-91455020	None:intergenic
CCTCCTCTCACGAACAACGT+GGG	0.620111	3:-91455123	None:intergenic
GATGGGGAAGGCGAAGAAGG+AGG	0.621967	3:+91455694	MsaT015832.1:CDS
AATCAGATAGAATCGGCTAG+AGG	0.623094	3:+91455302	MsaT015832.1:CDS
ATGTTTGTCGTGTTTGTGGG+AGG	0.623967	3:+91455207	MsaT015832.1:CDS
AGCGTGAGCATGCGAAAAGG+CGG	0.626856	3:+91455279	MsaT015832.1:CDS
AGGATGACAGAGGTCCTTGG+TGG	0.631079	3:+91455885	MsaT015832.1:CDS
GTTAGATAGGCCGCAAGCTG+CGG	0.632475	3:+91455466	MsaT015832.1:CDS
TCATATTGATGATGACTACA+AGG	0.634259	3:+91455865	MsaT015832.1:CDS
TTATGAAGGAAGCAAAGCTA+CGG	0.640003	3:+91455582	MsaT015832.1:CDS
TGGATATGATGGATCATAGG+CGG	0.652070	3:+91455513	MsaT015832.1:CDS
ATATATTGAAAAGATTGGAG+TGG	0.659405	3:+91455750	MsaT015832.1:CDS
CCACAAACACGACAAACATG+AGG	0.661362	3:-91455203	None:intergenic
TCCTCTCACGAACAACGTGG+GGG	0.698129	3:-91455121	None:intergenic
TCGGAGTCTAATTTCCACCA+AGG	0.709650	3:-91455899	None:intergenic
GATGACTACAAGGATGACAG+AGG	0.730694	3:+91455875	MsaT015832.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	91454831	91455946	91454831	ID=MsaG015832
Chr3	mRNA	91454831	91455946	91454831	ID=MsaT015832.1;Parent=MsaG015832
Chr3	exon	91454831	91455946	91454831	ID=MsaT015832.1.exon1;Parent=MsaT015832.1
Chr3	CDS	91454831	91455946	91454831	ID=cds.MsaT015832.1;Parent=MsaT015832.1

Gene Sequence

>MsaT015832.1

ATGGTTTCAATCCTCAAGTTCCGTAGAATATTCTACACAATAGAAGCCACTGGCATTCAAACATTTGTTGCCTTGAGACGACACTGTCATTCTTGGGGTCACGGAAGGATTTCGGATAAAAATCCGAATGAGAAGCTATGTAGAGTAGGGCTGTTCTGGGACTTAGACAACAAACCACCCAATTCAATCCCACCTTATGAAGTTGCCAATAAGCTCAGAATAGCTGCAGCTTCTTTTGGAGTTGTTCGACATATGGTGGCTTATGCCAATAGCCACACTTTTAGCAATGTCCCCCACGTTGTTCGTGAGAGGAGGAAAGAACAGGAACTGTTGTATCGTTTGGAGGATAAGGGTGTGATTAAGCGTAATGAGCCTCATGTTTGTCGTGTTTGTGGGAGGAAATTTTACACGAATGAAAAGCTTGTTAATCATTTCAAGCAATTGCATGAGCGTGAGCATGCGAAAAGGCGGAATCAGATAGAATCGGCTAGAGGGAGTAGAAAGGTGAAATTGGTGGGTAAGTATGCTATGAAAATGGAAAAGTATAAGAAGGCTGCAAGTGCTGTTTTGACTCCTAAAGTTGGGTATGGTTTGGCTGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGTTAGATAGGCCGCAAGCTGCGGATATTGCATTGCAAAAGCATATGGTGGATATGATGGATCATAGGCGGGTTGAGTGTTTGGTTCTTGTATCGGATGATTCTGATTTTGTCGATGTTATGAAGGAAGCAAAGCTACGGTGTCTCAAGACTGTTGTTATTGGGGATTTTAGCAGTGATGGAGTCTTGAAAAGGACTGCCGATACTGCTTTTTCTTGGGAGGATATTTTGATGGGGAAGGCGAAGAAGGAGGCTGTATCGGTTGTGGAAAACTGGAAAGATCGTGATATATTGAAAAGATTGGAGTGGACATATAACCCAGAAGTGGATAAAAAGAAACACAACTTGGATGATGCAGTTCCTAAAACATCTGGAGTTGATGATATTGAAGATATTTGTGATCATATTGATGATGACTACAAGGATGACAGAGGTCCTTGGTGGAAATTAGACTCCGATGATAATGGTGTTGCAAATCGATAA

Protein sequence

>MsaT015832.1

MVSILKFRRIFYTIEATGIQTFVALRRHCHSWGHGRISDKNPNEKLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHVVRERRKEQELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRRNQIESARGSRKVKLVGKYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQKHMVDMMDHRRVECLVLVSDDSDFVDVMKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSWEDILMGKAKKEAVSVVENWKDRDILKRLEWTYNPEVDKKKHNLDDAVPKTSGVDDIEDICDHIDDDYKDDRGPWWKLDSDDNGVANR*