AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG016490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG016490 MtrunA17_Chr3g0129341 84.760 479 27 4 1 434 1 478 0.0 792
MsaG016490 MtrunA17_Chr8g0383311 57.290 487 156 8 1 436 10 495 0.0 550
MsaG016490 MtrunA17_Chr3g0129321 92.754 207 12 2 432 637 1 205 1.24e-131 385
MsaG016490 MtrunA17_Chr2g0306311 44.864 477 188 10 34 436 30 505 2.29e-128 388
MsaG016490 MtrunA17_Chr3g0138741 44.541 458 202 6 12 422 13 465 5.14e-127 384
MsaG016490 MtrunA17_Chr4g0062771 43.852 431 194 5 33 415 30 460 1.59e-126 382
MsaG016490 MtrunA17_Chr1g0148391 42.647 476 216 8 1 429 1 466 2.51e-124 376
MsaG016490 MtrunA17_Chr7g0253091 44.989 449 196 7 15 415 9 454 7.27e-124 375
MsaG016490 MtrunA17_Chr6g0461601 45.183 436 187 8 31 415 23 457 3.27e-119 363
MsaG016490 MtrunA17_Chr4g0069801 42.105 456 203 9 10 416 13 456 7.85e-113 347
MsaG016490 MtrunA17_Chr2g0290821 40.749 427 204 6 34 413 28 452 1.25e-105 328
MsaG016490 MtrunA17_Chr4g0076581 39.130 460 224 8 5 415 8 460 4.81e-100 314
MsaG016490 MtrunA17_Chr3g0105981 36.029 408 214 6 33 396 26 430 1.40e-79 258
MsaG016490 MtrunA17_Chr8g0383251 51.256 199 76 6 432 625 1 183 5.98e-54 182
MsaG016490 MtrunA17_Chr8g0339191 27.766 461 269 15 10 412 5 459 4.78e-48 175
MsaG016490 MtrunA17_Chr4g0034901 27.549 461 264 16 11 412 11 460 8.93e-44 163
MsaG016490 MtrunA17_Chr4g0046311 28.788 462 250 18 10 406 5 452 5.20e-42 158
MsaG016490 MtrunA17_Chr3g0144531 27.918 437 254 15 28 409 22 452 3.45e-41 155
MsaG016490 MtrunA17_Chr1g0177171 27.391 460 247 16 34 412 38 491 4.43e-40 153
MsaG016490 MtrunA17_Chr8g0389741 27.083 432 254 15 34 411 28 452 2.65e-39 151
MsaG016490 MtrunA17_Chr1g0161011 26.144 459 267 15 11 411 1 445 6.57e-38 147
MsaG016490 MtrunA17_Chr3g0110371 25.877 456 266 16 13 412 7 446 1.47e-37 146
MsaG016490 MtrunA17_Chr5g0434591 25.721 451 261 14 27 418 16 451 2.26e-37 145
MsaG016490 MtrunA17_Chr7g0234821 25.968 439 258 14 35 412 27 459 8.57e-37 143
MsaG016490 MtrunA17_Chr6g0487261 25.727 447 264 17 22 411 19 454 3.92e-36 142
MsaG016490 MtrunA17_Chr1g0150801 45.763 177 69 6 442 610 5 162 9.55e-35 129
MsaG016490 MtrunA17_Chr1g0146831 31.650 297 168 11 13 288 16 298 9.74e-34 132
MsaG016490 MtrunA17_Chr7g0223961 27.586 435 245 20 34 409 23 446 4.39e-33 132
MsaG016490 MtrunA17_Chr8g0378621 26.362 459 265 19 11 412 7 449 1.01e-32 132
MsaG016490 MtrunA17_Chr4g0039071 29.044 272 170 7 34 288 25 290 1.44e-32 129
MsaG016490 MtrunA17_Chr4g0038941 30.793 328 163 13 27 308 48 357 9.39e-32 126
MsaG016490 MtrunA17_Chr2g0294601 28.669 293 182 7 14 287 41 325 1.22e-31 127
MsaG016490 MtrunA17_Chr4g0026321 28.435 313 190 11 34 323 29 330 7.43e-31 124
MsaG016490 MtrunA17_Chr4g0039021 31.102 254 144 8 54 288 1 242 1.01e-30 122
MsaG016490 MtrunA17_Chr4g0038981 28.247 308 183 9 14 305 3 288 5.58e-30 120
MsaG016490 MtrunA17_Chr4g0003281 29.642 307 185 12 10 292 15 314 8.84e-30 122
MsaG016490 MtrunA17_Chr3g0121271 24.945 453 275 21 11 411 7 446 1.23e-29 123
MsaG016490 MtrunA17_Chr1g0174261 29.461 241 149 6 63 287 1 236 1.55e-29 120
MsaG016490 MtrunA17_Chr4g0075031 23.853 436 266 14 32 412 43 467 1.69e-29 122
MsaG016490 MtrunA17_Chr5g0439251 31.317 281 165 11 34 292 25 299 5.06e-29 120
MsaG016490 MtrunA17_Chr2g0321511 28.135 327 190 12 7 307 2 309 5.26e-29 119
MsaG016490 MtrunA17_Chr1g0189111 30.357 280 167 11 34 292 31 303 1.21e-28 119
MsaG016490 MtrunA17_Chr4g0043511 23.478 460 274 18 34 422 62 514 2.00e-28 120
MsaG016490 MtrunA17_Chr3g0119541 31.481 270 157 11 19 269 14 274 2.40e-28 117
MsaG016490 MtrunA17_Chr2g0294591 28.676 272 169 8 34 286 30 295 4.25e-28 116
MsaG016490 MtrunA17_Chr4g0038971 26.948 308 187 10 14 305 3 288 4.53e-28 115
MsaG016490 MtrunA17_Chr4g0038961 26.393 341 192 11 14 309 3 329 5.33e-28 115
MsaG016490 MtrunA17_Chr1g0155001 28.622 283 175 9 29 289 19 296 6.77e-28 116
MsaG016490 MtrunA17_Chr4g0039011 29.577 284 170 11 34 298 42 314 1.27e-27 114
MsaG016490 MtrunA17_Chr2g0294231 59.740 77 31 0 536 612 189 265 5.43e-27 113
MsaG016490 MtrunA17_Chr4g0051881 46.667 105 43 1 536 627 164 268 5.47e-27 112
MsaG016490 MtrunA17_Chr4g0064021 29.252 294 179 9 19 292 16 300 7.93e-27 112
MsaG016490 MtrunA17_Chr8g0335811 54.255 94 33 2 518 611 131 214 3.77e-26 107
MsaG016490 MtrunA17_Chr5g0443131 57.333 75 32 0 536 610 143 217 9.39e-26 108
MsaG016490 MtrunA17_Chr4g0068541 62.162 74 28 0 537 610 195 268 1.04e-25 110
MsaG016490 MtrunA17_Chr1g0194481 50.000 94 44 1 519 612 130 220 3.51e-25 107
MsaG016490 MtrunA17_Chr7g0250321 29.412 272 161 11 15 267 9 268 1.78e-24 103
MsaG016490 MtrunA17_Chr7g0224801 58.209 67 28 0 540 606 83 149 1.92e-24 100
MsaG016490 MtrunA17_Chr5g0418781 45.192 104 56 1 505 608 80 182 3.55e-24 102
MsaG016490 MtrunA17_Chr7g0270191 39.823 113 67 1 505 617 101 212 6.18e-24 102
MsaG016490 MtrunA17_Chr8g0386241 47.674 86 45 0 521 606 74 159 1.08e-23 98.6
MsaG016490 MtrunA17_Chr7g0248721 48.980 98 45 3 513 610 106 198 1.55e-23 99.4
MsaG016490 MtrunA17_Chr3g0129361 56.579 76 32 1 536 611 130 204 3.10e-23 98.6
MsaG016490 MtrunA17_Chr3g0079691 37.324 142 80 2 482 623 436 568 3.49e-23 104
MsaG016490 MtrunA17_Chr3g0079691 53.333 60 27 1 550 609 280 338 3.26e-13 72.8
MsaG016490 MtrunA17_Chr7g0218081 36.310 168 84 6 485 630 329 495 3.97e-23 103
MsaG016490 MtrunA17_Chr7g0218081 56.667 60 25 1 550 609 228 286 8.52e-14 74.3
MsaG016490 MtrunA17_Chr5g0418191 41.346 104 59 1 507 610 279 380 1.30e-22 101
MsaG016490 MtrunA17_Chr5g0418191 51.667 60 28 1 550 609 151 209 8.64e-12 67.8
MsaG016490 MtrunA17_Chr4g0043851 27.213 305 189 11 4 284 2 297 1.33e-22 100
MsaG016490 MtrunA17_Chr7g0249301 53.947 76 35 0 535 610 277 352 1.34e-22 100
MsaG016490 MtrunA17_Chr7g0249301 48.485 66 33 1 547 612 59 123 3.08e-12 68.9
MsaG016490 MtrunA17_Chr7g0249311 56.000 75 33 0 536 610 378 452 2.10e-22 102
MsaG016490 MtrunA17_Chr7g0249311 52.381 63 29 1 550 612 179 240 5.29e-13 72.0
MsaG016490 MtrunA17_Chr5g0445311 45.833 96 44 1 523 610 329 424 2.30e-22 101
MsaG016490 MtrunA17_Chr5g0445311 48.333 60 30 1 550 609 200 258 6.36e-11 65.5
MsaG016490 MtrunA17_Chr7g0250301 27.964 329 185 17 34 336 8 310 2.84e-22 98.2
MsaG016490 MtrunA17_Chr8g0383351 57.143 77 31 2 536 611 145 220 3.11e-22 95.9
MsaG016490 MtrunA17_Chr4g0042831 52.000 75 36 0 536 610 264 338 5.94e-22 98.6
MsaG016490 MtrunA17_Chr4g0042831 35.256 156 74 4 481 636 98 226 4.54e-14 74.3
MsaG016490 MtrunA17_Chr7g0243891 51.724 87 36 1 524 610 354 434 1.15e-21 99.4
MsaG016490 MtrunA17_Chr7g0243891 51.667 60 28 1 550 609 216 274 2.03e-12 70.1
MsaG016490 MtrunA17_Chr4g0004911 55.405 74 33 0 536 609 322 395 1.26e-21 98.6
MsaG016490 MtrunA17_Chr4g0004911 49.254 67 34 0 543 609 177 243 2.97e-14 75.9
MsaG016490 MtrunA17_Chr3g0101131 53.333 75 35 0 536 610 401 475 1.42e-21 99.4
MsaG016490 MtrunA17_Chr3g0106491 53.333 75 35 0 536 610 351 425 5.51e-21 96.7
MsaG016490 MtrunA17_Chr3g0106491 44.000 75 37 2 540 610 184 257 4.95e-12 68.9
MsaG016490 MtrunA17_Chr6g0485431 34.752 141 82 4 477 609 76 214 7.57e-21 94.7
MsaG016490 MtrunA17_Chr5g0432161 45.833 96 46 1 515 610 392 481 1.15e-20 96.3
MsaG016490 MtrunA17_Chr5g0432161 51.667 60 28 1 550 609 244 302 1.10e-11 67.8
MsaG016490 MtrunA17_Chr7g0263531 45.263 95 46 1 521 609 326 420 2.32e-20 94.4
MsaG016490 MtrunA17_Chr7g0263531 54.237 59 26 1 551 609 190 247 3.52e-12 68.9
MsaG016490 MtrunA17_Chr2g0285901 26.523 279 179 10 34 292 24 296 1.69e-19 91.3
MsaG016490 MtrunA17_Chr5g0447701 52.055 73 35 0 537 609 239 311 4.05e-19 90.1
MsaG016490 MtrunA17_Chr7g0238921 46.914 81 37 1 550 630 124 198 4.70e-19 88.6
MsaG016490 MtrunA17_Chr7g0270831 45.055 91 45 2 524 609 186 276 5.72e-19 90.1
MsaG016490 MtrunA17_Chr1g0188941 42.045 88 42 1 522 609 32 110 6.10e-19 82.8
MsaG016490 MtrunA17_Chr3g0099641 50.000 74 36 1 537 609 238 311 5.19e-18 87.4
MsaG016490 MtrunA17_Chr4g0075201 48.649 74 37 1 537 609 254 327 7.58e-18 87.0
MsaG016490 MtrunA17_Chr1g0189391 48.684 76 38 1 532 606 79 154 7.67e-18 85.5
MsaG016490 MtrunA17_Chr2g0302391 51.351 74 35 1 537 609 198 271 9.68e-18 86.3
MsaG016490 MtrunA17_Chr2g0288871 48.649 74 37 1 537 609 292 365 1.13e-17 86.7
MsaG016490 MtrunA17_Chr2g0333851 36.296 135 67 5 522 637 138 272 1.79e-17 84.0
MsaG016490 MtrunA17_Chr4g0053281 44.186 86 44 2 522 606 241 323 8.35e-17 82.4
MsaG016490 MtrunA17_Chr4g0074001 44.595 74 41 0 536 609 345 418 1.21e-16 83.2
MsaG016490 MtrunA17_Chr4g0051181 48.649 74 37 1 537 609 230 303 1.92e-16 82.4
MsaG016490 MtrunA17_Chr2g0322391 47.297 74 38 1 537 609 336 409 2.90e-16 82.4
MsaG016490 MtrunA17_Chr4g0025051 49.351 77 38 1 537 612 322 398 2.92e-16 82.4
MsaG016490 MtrunA17_Chr4g0060271 44.706 85 46 1 526 609 231 315 3.37e-16 82.4
MsaG016490 MtrunA17_Chr1g0147881 45.455 88 42 4 520 606 237 319 8.47e-16 79.3
MsaG016490 MtrunA17_Chr2g0319961 41.758 91 50 2 522 609 50 140 1.16e-15 77.4
MsaG016490 MtrunA17_Chr3g0136961 52.542 59 27 1 549 606 137 195 1.25e-15 78.2
MsaG016490 MtrunA17_Chr2g0293481 34.426 122 76 2 490 610 210 328 1.55e-15 79.7
MsaG016490 MtrunA17_Chr5g0401821 44.706 85 43 2 523 606 175 256 3.12e-15 76.3
MsaG016490 MtrunA17_Chr4g0071521 44.828 87 41 2 521 606 222 302 3.54e-15 77.0
MsaG016490 MtrunA17_Chr8g0379461 47.143 70 36 1 551 619 77 146 3.58e-15 75.9
MsaG016490 MtrunA17_Chr7g0216891 40.816 98 54 2 510 606 182 276 4.45e-15 78.6
MsaG016490 MtrunA17_Chr7g0270051 42.857 98 43 4 519 609 22 113 6.15e-15 75.5
MsaG016490 MtrunA17_Chr7g0228941 36.905 84 49 2 526 608 31 111 2.19e-14 70.1
MsaG016490 MtrunA17_Chr4g0001361 49.206 63 31 1 548 609 160 222 2.33e-14 74.7
MsaG016490 MtrunA17_Chr5g0447711 41.892 74 43 0 536 609 216 289 3.69e-14 73.9
MsaG016490 MtrunA17_Chr5g0436361 22.143 280 178 11 51 299 54 324 4.67e-14 74.3
MsaG016490 MtrunA17_Chr8g0348311 45.455 66 35 1 547 611 152 217 5.46e-14 73.6
MsaG016490 MtrunA17_Chr4g0025061 45.946 74 39 1 537 609 347 420 6.94e-14 75.1
MsaG016490 MtrunA17_Chr1g0202461 47.619 63 32 1 548 609 259 321 1.09e-13 73.2
MsaG016490 MtrunA17_Chr8g0387501 50.000 60 29 1 551 609 130 189 1.11e-13 72.0
MsaG016490 MtrunA17_Chr2g0294581 29.412 153 97 3 34 185 76 218 1.39e-13 71.6
MsaG016490 MtrunA17_Chr1g0184691 41.250 80 46 1 528 606 271 350 2.01e-13 72.4
MsaG016490 MtrunA17_Chr7g0248691 46.154 65 34 1 548 611 152 216 2.10e-13 72.0
MsaG016490 MtrunA17_Chr1g0150281 47.368 57 29 1 551 606 141 197 3.97e-13 70.5
MsaG016490 MtrunA17_Chr2g0284321 48.333 60 30 1 551 609 36 95 5.50e-13 68.6
MsaG016490 MtrunA17_Chr8g0378361 34.091 132 68 5 328 456 29 144 1.14e-12 67.0
MsaG016490 MtrunA17_Chr8g0378381 38.889 90 52 3 325 412 28 116 1.38e-12 64.7
MsaG016490 MtrunA17_Chr2g0289181 43.750 64 35 1 547 609 11 74 2.04e-12 67.4
MsaG016490 MtrunA17_Chr3g0139021 37.500 88 46 3 521 606 291 371 3.69e-12 68.6
MsaG016490 MtrunA17_Chr1g0150271 38.095 84 47 2 548 626 99 182 8.58e-12 65.9
MsaG016490 MtrunA17_Chr7g0271411 40.230 87 47 4 329 412 160 244 1.10e-11 66.2
MsaG016490 MtrunA17_Chr2g0304061 40.698 86 47 4 328 411 157 240 2.01e-11 65.9
MsaG016490 MtrunA17_Chr8g0378401 39.759 83 47 3 325 405 28 109 5.56e-11 60.5
MsaG016490 MtrunA17_Chr4g0024391 40.541 74 43 1 537 609 216 289 8.02e-11 64.7
MsaG016490 MtrunA17_Chr5g0432071 47.619 63 32 1 550 612 104 165 8.54e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG016490 AT5G64790.1 44.835 455 205 4 9 417 3 457 1.88e-137 410
MsaG016490 AT2G19440.2 45.759 448 193 8 16 415 3 448 2.98e-127 384
MsaG016490 AT2G19440.1 45.759 448 193 8 16 415 3 448 2.98e-127 384
MsaG016490 AT4G31140.1 42.857 483 212 9 10 436 8 482 2.26e-125 379
MsaG016490 AT5G58090.1 46.387 429 184 5 34 416 22 450 1.11e-123 375
MsaG016490 AT1G64760.1 45.708 431 184 8 33 415 24 452 7.44e-122 370
MsaG016490 AT1G64760.2 45.708 431 184 8 33 415 24 452 7.44e-122 370
MsaG016490 AT5G18220.1 44.371 453 190 11 20 415 12 459 6.56e-121 368
MsaG016490 AT3G24330.1 41.322 484 224 8 11 439 20 498 1.14e-120 368
MsaG016490 AT5G20870.1 43.777 466 200 10 11 422 13 470 1.87e-120 367
MsaG016490 AT3G04010.1 44.598 435 188 9 31 415 30 461 3.98e-119 363
MsaG016490 AT4G17180.1 38.926 447 215 9 14 413 7 442 2.65e-95 301
MsaG016490 AT5G58480.1 37.558 434 222 6 30 418 22 451 9.75e-90 287
MsaG016490 AT3G07320.1 31.250 448 241 17 25 412 16 456 4.04e-50 181
MsaG016490 AT5G24318.1 29.032 465 250 23 6 409 8 453 2.60e-44 165
MsaG016490 AT3G55430.1 32.189 466 244 22 1 411 1 449 1.24e-43 162
MsaG016490 AT5G24318.2 28.850 461 248 23 6 405 8 449 9.97e-43 160
MsaG016490 AT4G26830.2 27.356 435 253 16 34 412 29 456 1.65e-42 160
MsaG016490 AT4G26830.1 27.356 435 253 16 34 412 25 452 1.89e-42 159
MsaG016490 AT2G05790.1 27.716 451 248 16 34 412 25 469 2.60e-41 157
MsaG016490 AT5G55180.1 26.304 441 253 16 34 412 27 457 8.48e-41 155
MsaG016490 AT2G16230.1 26.852 432 257 14 34 412 25 450 8.78e-41 155
MsaG016490 AT4G34480.1 26.419 458 274 14 6 412 3 448 2.27e-40 154
MsaG016490 AT3G23770.1 29.279 444 241 19 34 412 37 472 3.59e-40 154
MsaG016490 AT2G01630.1 26.424 439 259 14 34 418 23 451 2.67e-39 151
MsaG016490 AT5G55180.2 26.207 435 249 16 34 406 27 451 1.16e-38 149
MsaG016490 AT5G56590.1 27.002 437 251 16 34 411 26 453 5.82e-38 148
MsaG016490 AT5G64810.1 60.185 108 42 1 522 629 83 189 5.28e-37 137
MsaG016490 AT4G14080.1 27.273 440 252 17 34 412 42 474 6.56e-37 144
MsaG016490 AT1G66250.1 26.790 433 250 17 34 411 32 452 2.73e-36 143
MsaG016490 AT2G39640.1 27.027 444 267 17 15 413 13 444 1.09e-35 142
MsaG016490 AT2G27500.2 31.186 295 173 9 33 307 28 312 1.96e-34 135
MsaG016490 AT1G11820.2 25.508 443 264 15 25 412 35 466 2.97e-34 137
MsaG016490 AT3G57270.1 30.483 269 165 6 34 286 27 289 3.36e-34 133
MsaG016490 AT5G26170.1 75.000 72 18 0 537 608 100 171 4.56e-34 128
MsaG016490 AT2G01630.3 25.587 426 253 14 34 405 23 438 4.57e-34 135
MsaG016490 AT2G27500.1 31.186 295 173 9 33 307 28 312 6.67e-34 134
MsaG016490 AT3G57260.1 33.086 269 154 8 34 286 32 290 7.18e-34 132
MsaG016490 AT3G57260.2 33.086 269 154 8 34 286 48 306 9.54e-34 132
MsaG016490 AT5G24318.4 31.596 307 169 17 6 288 8 297 6.35e-32 127
MsaG016490 AT4G29360.1 23.851 457 265 13 34 413 27 477 1.51e-31 129
MsaG016490 AT4G29360.2 23.851 457 265 13 34 413 37 487 1.71e-31 129
MsaG016490 AT3G13560.4 26.608 451 248 18 34 421 26 456 4.95e-31 127
MsaG016490 AT3G13560.1 26.608 451 248 18 34 421 26 456 4.95e-31 127
MsaG016490 AT3G13560.2 26.608 451 248 18 34 421 26 456 4.95e-31 127
MsaG016490 AT3G13560.5 26.608 451 248 18 34 421 26 456 4.95e-31 127
MsaG016490 AT3G13560.3 26.608 451 248 18 34 421 26 456 4.95e-31 127
MsaG016490 AT1G11820.3 25.172 437 261 15 25 406 35 460 6.69e-31 127
MsaG016490 AT4G34480.2 30.284 317 189 11 6 302 3 307 6.83e-31 124
MsaG016490 AT1G32860.1 30.466 279 169 9 34 292 29 302 1.07e-30 125
MsaG016490 AT4G16260.1 29.012 324 182 14 11 314 4 299 2.53e-30 122
MsaG016490 AT1G33220.1 29.000 300 181 10 12 292 15 301 3.79e-30 122
MsaG016490 AT3G15800.1 30.108 279 170 9 35 292 44 318 5.24e-30 122
MsaG016490 AT5G42100.2 32.616 279 161 10 34 290 27 300 6.14e-30 123
MsaG016490 AT5G42100.1 32.616 279 161 10 34 290 27 300 6.32e-30 123
MsaG016490 AT5G20390.1 29.085 306 185 11 6 292 8 300 3.83e-29 119
MsaG016490 AT3G61810.1 29.966 297 174 11 29 298 50 339 6.01e-29 119
MsaG016490 AT4G16260.2 30.000 280 153 11 54 314 15 270 6.12e-29 117
MsaG016490 AT5G42720.1 28.956 297 182 12 14 288 8 297 6.65e-29 120
MsaG016490 AT4G34480.3 27.647 340 191 11 123 412 3 337 2.21e-28 118
MsaG016490 AT3G57240.1 29.368 269 162 8 34 286 35 291 1.10e-27 115
MsaG016490 AT5G20340.1 28.013 307 184 11 12 292 15 310 1.47e-27 114
MsaG016490 AT5G20330.1 29.000 300 181 10 12 292 15 301 3.60e-27 113
MsaG016490 AT2G46130.1 57.895 76 30 1 535 610 15 88 4.68e-27 106
MsaG016490 AT5G41570.1 50.000 92 44 1 519 610 67 156 8.20e-27 107
MsaG016490 AT3G01970.1 54.430 79 34 1 537 613 52 130 1.34e-26 106
MsaG016490 AT4G18170.1 50.526 95 45 1 519 611 139 233 2.27e-26 110
MsaG016490 AT5G46350.1 55.263 76 34 0 536 611 169 244 2.23e-25 107
MsaG016490 AT2G26600.1 28.777 278 174 9 35 292 35 308 2.56e-25 108
MsaG016490 AT1G29860.1 58.904 73 30 0 537 609 123 195 3.55e-25 106
MsaG016490 AT2G21900.1 45.455 99 46 2 519 614 80 173 3.86e-25 103
MsaG016490 AT2G44745.1 51.648 91 35 1 516 606 120 201 4.40e-25 104
MsaG016490 AT5G24318.3 27.726 321 168 14 146 409 1 314 5.48e-25 106
MsaG016490 AT5G49520.1 60.274 73 29 0 537 609 208 280 5.52e-25 108
MsaG016490 AT2G47260.1 47.170 106 51 2 513 618 140 240 2.16e-24 105
MsaG016490 AT3G62340.1 54.217 83 38 0 528 610 96 178 2.29e-24 103
MsaG016490 AT5G13080.1 57.143 70 30 0 537 606 54 123 3.25e-24 99.4
MsaG016490 AT1G13960.1 38.889 144 78 3 470 609 331 468 4.22e-24 107
MsaG016490 AT1G13960.1 47.436 78 37 2 538 612 214 290 3.94e-15 79.0
MsaG016490 AT1G13960.2 46.226 106 47 2 513 609 211 315 5.22e-24 104
MsaG016490 AT1G13960.2 47.436 78 37 2 538 612 61 137 3.79e-15 77.8
MsaG016490 AT1G64000.1 55.405 74 31 1 537 610 101 172 1.97e-23 99.0
MsaG016490 AT5G20560.1 26.014 296 196 8 12 292 15 302 2.00e-23 102
MsaG016490 AT1G69310.4 54.795 73 33 0 536 608 133 205 3.13e-23 100
MsaG016490 AT1G69310.2 54.795 73 33 0 536 608 133 205 3.13e-23 100
MsaG016490 AT1G69310.1 54.795 73 33 0 536 608 133 205 3.13e-23 100
MsaG016490 AT2G01630.2 28.231 294 176 10 34 305 23 303 3.93e-23 102
MsaG016490 AT3G46570.1 30.651 261 143 13 34 269 27 274 4.56e-23 101
MsaG016490 AT4G18340.2 27.626 257 164 8 29 268 29 280 4.87e-23 102
MsaG016490 AT2G46130.2 55.263 76 28 2 535 610 15 84 7.53e-23 94.0
MsaG016490 AT2G27500.3 29.098 244 144 8 83 307 1 234 1.25e-22 99.8
MsaG016490 AT4G18340.1 27.626 257 164 8 29 268 29 280 1.34e-22 100
MsaG016490 AT4G39410.1 47.872 94 39 2 518 611 200 283 1.55e-22 99.0
MsaG016490 AT2G03340.1 53.333 75 35 0 536 610 401 475 2.63e-22 101
MsaG016490 AT2G03340.1 42.105 95 50 2 519 609 215 308 4.24e-14 75.9
MsaG016490 AT2G04880.2 42.478 113 54 2 511 615 239 348 3.45e-22 100
MsaG016490 AT2G04880.1 42.478 113 54 2 511 615 263 372 3.46e-22 100
MsaG016490 AT2G30250.1 48.980 98 43 2 520 610 291 388 1.31e-21 97.8
MsaG016490 AT5G07100.2 50.549 91 41 2 519 609 114 200 1.69e-21 94.0
MsaG016490 AT5G07100.4 50.549 91 41 2 519 609 114 200 1.69e-21 94.0
MsaG016490 AT5G07100.5 50.549 91 41 2 519 609 114 200 1.69e-21 94.0
MsaG016490 AT5G07100.3 50.549 91 41 2 519 609 114 200 1.69e-21 94.0
MsaG016490 AT5G07100.1 50.000 92 42 2 519 610 207 294 1.99e-21 95.9
MsaG016490 AT5G07100.1 35.714 112 60 3 510 609 65 176 9.54e-11 63.9
MsaG016490 AT5G56270.1 51.163 86 41 1 526 610 462 547 2.28e-21 99.4
MsaG016490 AT5G56270.1 55.000 60 26 1 550 609 273 331 3.15e-13 73.6
MsaG016490 AT4G26640.5 52.000 75 36 0 536 610 191 265 2.85e-21 96.7
MsaG016490 AT4G26640.5 39.535 86 51 1 548 633 33 117 2.27e-11 66.6
MsaG016490 AT4G26640.6 52.000 75 36 0 536 610 191 265 2.85e-21 96.7
MsaG016490 AT4G26640.6 39.535 86 51 1 548 633 33 117 2.27e-11 66.6
MsaG016490 AT4G26640.4 52.000 75 36 0 536 610 191 265 2.85e-21 96.7
MsaG016490 AT4G26640.4 39.535 86 51 1 548 633 33 117 2.27e-11 66.6
MsaG016490 AT4G26640.3 52.000 75 36 0 536 610 191 265 2.85e-21 96.7
MsaG016490 AT4G26640.3 39.535 86 51 1 548 633 33 117 2.27e-11 66.6
MsaG016490 AT3G01080.1 50.000 74 37 0 536 609 292 365 3.88e-21 97.1
MsaG016490 AT3G01080.1 51.613 62 29 1 550 611 167 227 6.58e-13 71.6
MsaG016490 AT3G01080.2 50.000 74 37 0 536 609 330 403 4.05e-21 97.4
MsaG016490 AT3G01080.2 51.613 62 29 1 550 611 205 265 6.23e-13 72.0
MsaG016490 AT4G26640.7 51.316 76 37 0 536 611 327 402 4.50e-21 97.4
MsaG016490 AT4G26640.7 39.535 86 51 1 548 633 169 253 2.99e-11 66.6
MsaG016490 AT4G26640.1 52.000 75 36 0 536 610 295 369 4.95e-21 97.4
MsaG016490 AT4G26640.1 39.535 86 51 1 548 633 137 221 3.01e-11 66.6
MsaG016490 AT4G26640.2 51.316 76 37 0 536 611 367 442 5.35e-21 97.8
MsaG016490 AT4G26640.2 39.535 86 51 1 548 633 209 293 2.75e-11 67.0
MsaG016490 AT2G38470.1 53.333 75 35 0 536 610 348 422 6.74e-21 97.1
MsaG016490 AT2G38470.1 45.833 72 37 2 538 609 173 242 6.35e-11 65.9
MsaG016490 AT1G30080.2 26.014 296 186 11 14 284 14 301 7.23e-20 92.4
MsaG016490 AT4G26440.1 42.202 109 53 2 506 610 330 432 1.01e-19 93.6
MsaG016490 AT4G26440.1 53.333 60 27 1 550 609 178 236 3.05e-12 70.1
MsaG016490 AT1G30080.1 26.014 296 186 11 14 284 14 301 1.03e-19 92.4
MsaG016490 AT1G69310.3 52.055 73 31 1 536 608 133 201 3.84e-19 88.6
MsaG016490 AT1G77780.1 26.616 263 165 10 48 292 38 290 8.94e-19 89.0
MsaG016490 AT1G11820.1 25.965 285 183 10 25 286 35 314 1.13e-18 89.0
MsaG016490 AT4G04450.2 48.649 74 37 1 537 609 185 258 2.03e-17 85.5
MsaG016490 AT1G68150.1 50.000 74 36 1 537 609 222 295 2.27e-17 84.7
MsaG016490 AT1G62300.1 50.000 74 36 1 537 609 299 372 5.41e-17 85.1
MsaG016490 AT4G22070.4 50.000 74 36 1 537 609 284 357 6.00e-17 84.7
MsaG016490 AT4G22070.3 50.000 74 36 1 537 609 284 357 6.00e-17 84.7
MsaG016490 AT4G22070.2 50.000 74 36 1 537 609 284 357 6.00e-17 84.7
MsaG016490 AT4G22070.1 50.000 74 36 1 537 609 284 357 6.00e-17 84.7
MsaG016490 AT5G43290.1 41.071 112 50 4 525 626 80 185 6.55e-17 82.0
MsaG016490 AT4G04450.1 48.649 74 37 1 537 609 279 352 7.50e-17 84.3
MsaG016490 AT1G55600.1 46.575 73 39 0 537 609 294 366 1.53e-16 83.2
MsaG016490 AT4G01720.1 43.750 96 49 2 519 609 204 299 1.60e-16 83.2
MsaG016490 AT4G30935.1 51.613 62 30 0 548 609 329 390 2.06e-16 82.8
MsaG016490 AT2G25000.2 45.833 72 38 1 549 619 102 173 4.42e-16 78.6
MsaG016490 AT2G25000.4 45.833 72 38 1 549 619 102 173 4.42e-16 78.6
MsaG016490 AT2G34830.1 33.871 124 77 4 488 609 155 275 5.23e-16 81.3
MsaG016490 AT2G34830.2 33.871 124 77 4 488 609 164 284 5.71e-16 81.3
MsaG016490 AT2G25000.3 45.833 72 38 1 549 619 124 195 8.30e-16 78.2
MsaG016490 AT5G15130.2 47.297 74 38 1 537 609 172 245 8.67e-16 80.9
MsaG016490 AT2G23320.1 42.353 85 45 2 523 606 216 297 1.05e-15 79.0
MsaG016490 AT5G15130.1 47.297 74 38 1 537 609 214 287 1.13e-15 80.9
MsaG016490 AT2G25000.1 45.833 72 38 1 549 619 145 216 1.25e-15 78.2
MsaG016490 AT1G18860.1 47.297 74 38 1 537 609 226 299 1.33e-15 80.5
MsaG016490 AT1G29280.1 40.000 95 54 2 521 612 43 137 1.50e-15 77.4
MsaG016490 AT1G80840.1 36.538 104 59 3 509 609 107 206 1.84e-15 78.2
MsaG016490 AT4G31800.2 50.000 62 30 1 549 609 110 171 2.36e-15 76.6
MsaG016490 AT4G24240.1 45.977 87 40 2 521 606 258 338 3.80e-15 77.8
MsaG016490 AT4G31800.1 50.000 62 30 1 549 609 175 236 5.57e-15 76.6
MsaG016490 AT2G24570.1 39.362 94 55 2 525 616 218 311 7.46e-15 76.6
MsaG016490 AT1G30650.1 34.400 125 70 5 493 609 157 277 1.07e-14 77.0
MsaG016490 AT3G58710.2 39.785 93 55 1 521 612 41 133 1.26e-14 75.1
MsaG016490 AT2G30590.1 45.000 80 43 1 528 606 291 370 2.13e-14 75.9
MsaG016490 AT5G28650.1 52.459 61 28 1 547 606 259 319 2.42e-14 75.1
MsaG016490 AT3G55780.1 22.846 267 180 8 46 292 47 307 2.92e-14 75.5
MsaG016490 AT2G37260.3 36.893 103 55 2 504 606 233 325 4.55e-14 74.7
MsaG016490 AT2G37260.3 52.542 59 27 1 551 609 86 143 3.46e-11 65.9
MsaG016490 AT2G37260.1 36.893 103 55 2 504 606 313 405 4.67e-14 75.1
MsaG016490 AT2G37260.1 52.542 59 27 1 551 609 166 223 2.72e-11 66.6
MsaG016490 AT3G58710.1 39.130 92 55 1 522 612 43 134 4.72e-14 73.2
MsaG016490 AT2G37260.2 36.893 103 55 2 504 606 231 323 4.73e-14 74.3
MsaG016490 AT2G37260.2 52.542 59 27 1 551 609 84 141 3.64e-11 65.5
MsaG016490 AT4G01250.1 48.387 62 31 1 551 611 129 190 4.82e-14 73.9
MsaG016490 AT4G31550.1 39.759 83 49 1 525 606 221 303 7.36e-14 73.6
MsaG016490 AT4G31550.2 45.977 87 40 5 521 606 222 302 9.32e-14 73.2
MsaG016490 AT3G04670.1 50.820 61 29 1 547 606 259 319 1.49e-13 72.8
MsaG016490 AT3G01080.3 51.613 62 29 1 550 611 205 265 2.37e-13 72.0
MsaG016490 AT1G09460.1 41.860 86 47 3 327 411 135 218 3.68e-13 71.6
MsaG016490 AT5G52830.1 44.928 69 37 1 544 611 159 227 4.09e-13 71.6
MsaG016490 AT1G77790.1 25.101 247 158 10 54 282 50 287 4.37e-13 71.6
MsaG016490 AT4G23550.1 45.312 64 34 1 548 610 138 201 4.96e-13 70.9
MsaG016490 AT2G30933.1 41.667 96 50 5 321 412 73 166 8.89e-13 68.6
MsaG016490 AT5G45050.4 37.037 108 62 2 503 609 999 1101 1.23e-12 72.0
MsaG016490 AT1G66870.2 36.364 88 52 3 327 411 51 137 1.31e-12 65.9
MsaG016490 AT5G45050.1 37.037 108 62 2 503 609 1138 1240 1.60e-12 71.6
MsaG016490 AT5G45050.2 37.037 108 62 2 503 609 1110 1212 1.69e-12 71.6
MsaG016490 AT1G69810.2 40.698 86 49 2 526 609 121 206 3.42e-12 68.6
MsaG016490 AT1G69810.1 40.698 86 49 2 526 609 179 264 6.04e-12 68.2
MsaG016490 AT4G13600.1 39.000 100 56 4 329 425 61 158 3.31e-11 64.3
MsaG016490 AT1G66870.1 34.409 93 57 3 322 411 19 110 5.23e-11 60.5

Find 147 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGATAAGGGTTAGAATT+AGG 0.170308 3:+98498664 None:intergenic
ATTGCGAGGGCCATGTATTT+TGG 0.189109 3:-98498691 MsaT016490.1:intron
TGGTTGTTCTTGTGGAAATT+TGG 0.204874 3:-98501201 MsaT016490.1:CDS
CATTAATTTATCTGATTATC+TGG 0.206659 3:-98498605 MsaT016490.1:CDS
ATGATTAACTTAGCATTAAT+TGG 0.209206 3:+98496932 None:intergenic
AAAATTGTTGTTGGTGAAAT+TGG 0.216428 3:-98501608 MsaT016490.1:CDS
AACATATTTGCAACAATATT+AGG 0.228206 3:+98502700 None:intergenic
GGACACACCATTTACGTTCT+TGG 0.256821 3:+98501309 None:intergenic
GAGATCGCAGCTTGAGATTA+TGG 0.274833 3:-98498253 MsaT016490.1:CDS
TTAATAGTTCTCCTAGCTTA+TGG 0.278686 3:-98502805 MsaT016490.1:CDS
GCTAACAACAATGCGTATTA+TGG 0.285682 3:-98501015 MsaT016490.1:CDS
GTCTCTAATTGTCATGCTAT+TGG 0.289131 3:+98501715 None:intergenic
AATTTACTTAATTGATCATT+AGG 0.299131 3:+98502583 None:intergenic
ATATGTGAAGAAAACATTTC+CGG 0.313087 3:-98501998 MsaT016490.1:CDS
GGTTGTTCTTGTGGAAATTT+GGG 0.319105 3:-98501200 MsaT016490.1:CDS
TGTGATAAGGGTTAGAATTA+GGG 0.327958 3:+98498665 None:intergenic
CATCATGTTATTGTTCTTGT+TGG 0.335475 3:+98498447 None:intergenic
TTCGATACCAAGAACGTAAA+TGG 0.336727 3:-98501316 MsaT016490.1:CDS
TACCAGGTCTTGGTATCAAT+TGG 0.337930 3:-98502750 MsaT016490.1:CDS
ATACTGCACCCCAGTGTCTT+TGG 0.341378 3:-98497003 MsaT016490.1:CDS
GGATTGCTCTCAAGTTCTAT+AGG 0.352894 3:+98501047 None:intergenic
GATATATTATTATTGTGATA+AGG 0.354376 3:+98498652 None:intergenic
CTCGTTCTAAACGTCACTCT+TGG 0.361959 3:+98498273 None:intergenic
AACAAACAAGTTCCCTTTGA+TGG 0.365848 3:+98501071 None:intergenic
GTCTTGGAGATTCCGAAGAT+TGG 0.368616 3:-98502552 MsaT016490.1:CDS
GATCAATTAAGTAAATTTGC+TGG 0.370017 3:-98502577 MsaT016490.1:CDS
ATAGAACTTGAGAGCAATCC+TGG 0.375087 3:-98501044 MsaT016490.1:CDS
GGATTCAAATGGAGGAAGTA+TGG 0.376820 3:-98498225 MsaT016490.1:CDS
ATTGTTGTTAGCATATTTCC+AGG 0.376834 3:+98501026 None:intergenic
AGTAAATTTGCTGGAAGTCT+TGG 0.379110 3:-98502568 MsaT016490.1:CDS
TGGGGTGCAGTATGAATTGC+AGG 0.381764 3:+98497013 None:intergenic
ATATATTATTATTGTGATAA+GGG 0.384981 3:+98498653 None:intergenic
ACCAGGTCTTGGTATCAATT+GGG 0.395464 3:-98502749 MsaT016490.1:CDS
AATCGCATGCTTCAACGCTT+TGG 0.395785 3:+98501126 None:intergenic
CTGCTCCTTGGACACATTGT+AGG 0.401411 3:+98502779 None:intergenic
AAATTTAGATACACTTGCTT+GGG 0.409151 3:-98501660 MsaT016490.1:CDS
TCACCAAACATCTTCACAAT+GGG 0.411216 3:-98502516 MsaT016490.1:CDS
AGCATGCGATTTCAATGGAT+TGG 0.419401 3:-98501114 MsaT016490.1:CDS
TTTATCTGATTATCTGGTGC+TGG 0.421050 3:-98498599 MsaT016490.1:CDS
GGTGCTGACTGTACAAGTTT+AGG 0.424024 3:-98501227 MsaT016490.1:CDS
AAGTGCACCTATGGAGAATT+CGG 0.430118 3:+98502831 None:intergenic
CTTCACTTTGATATAGACTA+AGG 0.430210 3:+98501768 None:intergenic
GTTATTGTTCTTGTTGGTAG+AGG 0.430991 3:+98498453 None:intergenic
TGCTCTTGCATCACACCCTA+TGG 0.431877 3:-98502725 MsaT016490.1:CDS
GATATTAATGTCATCAATCA+AGG 0.432364 3:-98498499 MsaT016490.1:CDS
GATTGCTCTCAAGTTCTATA+GGG 0.432371 3:+98501048 None:intergenic
GACTGTACAAGTTTAGGATA+TGG 0.442711 3:-98501221 MsaT016490.1:CDS
TTAGGATATGGTTGTTCTTG+TGG 0.446624 3:-98501209 MsaT016490.1:CDS
CAAATTTAGATACACTTGCT+TGG 0.450283 3:-98501661 MsaT016490.1:CDS
TCTTGGAGATTCCGAAGATT+GGG 0.452086 3:-98502551 MsaT016490.1:CDS
TATTAAACAAAGTGCACCTA+TGG 0.458268 3:+98502822 None:intergenic
GCAACAATATTAGGATCCAT+AGG 0.458383 3:+98502709 None:intergenic
CAGCTTGAGATTATGGATGA+TGG 0.458517 3:-98498246 MsaT016490.1:CDS
TTCTTGTGGAAATTTGGGAT+TGG 0.460015 3:-98501195 MsaT016490.1:CDS
AGAAAAGGGTGGAAAGGGAT+AGG 0.462080 3:-98497091 MsaT016490.1:CDS
AAGGATGTGGTGTGAAGAAA+AGG 0.469530 3:-98497106 MsaT016490.1:CDS
TCGTTCTAAACGTCACTCTT+GGG 0.470165 3:+98498274 None:intergenic
GAAAAGGGTGGAAAGGGATA+GGG 0.470665 3:-98497090 MsaT016490.1:CDS
ATTGATGACATTAATATCAA+TGG 0.474010 3:+98498504 None:intergenic
CAAAAGGCTATTGATAAAGC+TGG 0.474190 3:-98501961 MsaT016490.1:CDS
GGCTATGCAAAATATTCAAA+AGG 0.476276 3:-98501977 MsaT016490.1:CDS
TTCCGGAGACTTTGAAGTCA+TGG 0.476685 3:-98502614 MsaT016490.1:CDS
AACCATGACTTCAAAGTCTC+CGG 0.477395 3:+98502612 None:intergenic
GTGCTGCTGTGGCCATTCAT+TGG 0.482833 3:+98496974 None:intergenic
GCATGCGATTTCAATGGATT+GGG 0.483076 3:-98501113 MsaT016490.1:CDS
ACGTAAAAGCAGGGAGATGA+AGG 0.487697 3:-98498316 MsaT016490.1:CDS
CTGGTATAGACTCTGCTCCT+TGG 0.492408 3:+98502767 None:intergenic
TTGGAAGAAGAGGTTGCAGA+AGG 0.494174 3:+98496951 None:intergenic
CAACGGCTTACAGCCATGGC+TGG 0.496292 3:-98502856 None:intergenic
TGTGGAAATTTGGGATTGGC+TGG 0.496305 3:-98501191 MsaT016490.1:CDS
TATTGTTGCAAATATGTTGA+GGG 0.496953 3:-98502695 MsaT016490.1:CDS
CTTTGGTGTATTCCAATGAA+TGG 0.497333 3:-98496986 MsaT016490.1:CDS
GTTGAAGCATGCGATTTCAA+TGG 0.500531 3:-98501119 MsaT016490.1:CDS
TGTGAAGAAAAGGGTGGAAA+GGG 0.502030 3:-98497096 MsaT016490.1:CDS
GGAGACTTTGAAGTCATGGT+TGG 0.506234 3:-98502610 MsaT016490.1:CDS
AAGCTGTCGTCACCTTCACT+TGG 0.507853 3:+98501929 None:intergenic
GCAGAGTCTATACCAGGTCT+TGG 0.510161 3:-98502760 MsaT016490.1:CDS
GCATTTATGTTACCATCAGT+TGG 0.510806 3:+98501581 None:intergenic
CAAGGAGCAGAGTCTATACC+AGG 0.514183 3:-98502766 MsaT016490.1:CDS
AGGAACTACTACAAGTGTTC+AGG 0.517573 3:-98497131 MsaT016490.1:CDS
TGCTCCTTGGACACATTGTA+GGG 0.519753 3:+98502780 None:intergenic
AAGAGTAATTACCTTGGGTA+TGG 0.521127 3:+98498180 None:intergenic
CCAAAGAATGCAAAATCTTG+TGG 0.522621 3:+98501740 None:intergenic
TTGACAGGAAACGTAAAAGC+AGG 0.524253 3:-98498326 MsaT016490.1:intron
GCATTAGACTATGCTTGTGC+TGG 0.524700 3:-98501248 MsaT016490.1:CDS
TTATGGATGATGGATTCAAA+TGG 0.530112 3:-98498236 MsaT016490.1:CDS
TTAGCATTAATTGGAAGAAG+AGG 0.534274 3:+98496941 None:intergenic
TATTGCAGATACGTAGCAGT+TGG 0.535142 3:-98502054 MsaT016490.1:intron
TATGTGCTAACAAGCTATGA+AGG 0.537065 3:-98497056 MsaT016490.1:CDS
GACATTAATATCAATGGTGG+TGG 0.540399 3:+98498510 None:intergenic
ATTAGGGTTTCCAAAATACA+TGG 0.543667 3:+98498681 None:intergenic
TTGGAATACACCAAAGACAC+TGG 0.546851 3:+98496993 None:intergenic
TTTGATATAGACTAAGGAAA+GGG 0.546949 3:+98501774 None:intergenic
TACTACAAGTGTTCAGGTGA+AGG 0.550615 3:-98497125 MsaT016490.1:CDS
CTTAGTCTATATCAAAGTGA+AGG 0.554526 3:-98501767 MsaT016490.1:CDS
CAACAATATTAGGATCCATA+GGG 0.555039 3:+98502710 None:intergenic
GTTACAGAGGATCCATCAAA+GGG 0.555646 3:-98501083 MsaT016490.1:CDS
AAATCAGACGAGGAAGGAGG+AGG 0.561547 3:+98498628 None:intergenic
GTGTGAAGAAAAGGGTGGAA+AGG 0.565384 3:-98497097 MsaT016490.1:CDS
ATATTGTTGCAAATATGTTG+AGG 0.566916 3:-98502696 MsaT016490.1:CDS
AAATATGTCTTTGATCCCGT+CGG 0.567719 3:-98501270 MsaT016490.1:CDS
TGTTACAGAGGATCCATCAA+AGG 0.567895 3:-98501084 MsaT016490.1:CDS
GAATGTTGGTCACAAAGTAC+AGG 0.570695 3:-98498562 MsaT016490.1:CDS
CTCACCAAACATCTTCACAA+TGG 0.572031 3:-98502517 MsaT016490.1:CDS
GGAGAATTCGGCTCCAGCCA+TGG 0.573131 3:+98502843 None:intergenic
GTTGCAGAAGGGTGCTGCTG+TGG 0.575437 3:+98496963 None:intergenic
ATTGTAGGGTACCATAAGCT+AGG 0.578372 3:+98502794 None:intergenic
GAACCATTCTTGAAAAGCTA+CGG 0.595361 3:-98502027 MsaT016490.1:CDS
GCAAATATGTTGAGGGACAA+TGG 0.596010 3:-98502688 MsaT016490.1:CDS
TGGATGATGGATTCAAATGG+AGG 0.596809 3:-98498233 MsaT016490.1:CDS
TTGTTGTTGGTGAAATTGGT+TGG 0.599457 3:-98501604 MsaT016490.1:CDS
CAAACAAACAAACCGTCGGA+TGG 0.601206 3:-98501883 MsaT016490.1:CDS
TTGGGAATTTATCGCTACGA+TGG 0.601328 3:-98501404 MsaT016490.1:CDS
TGGAATACACCAAAGACACT+GGG 0.603339 3:+98496994 None:intergenic
CCAGGTCTTGGTATCAATTG+GGG 0.604725 3:-98502748 MsaT016490.1:CDS
TTAATATCAATGGTGGTGGA+AGG 0.605778 3:+98498514 None:intergenic
GCTATTGATAAAGCTGGACA+TGG 0.606450 3:-98501955 MsaT016490.1:CDS
CTTTGATATAGACTAAGGAA+AGG 0.609141 3:+98501773 None:intergenic
GCTGGAGCCGAATTCTCCAT+AGG 0.610420 3:-98502838 MsaT016490.1:CDS
CAAGCATAGTCTAATGCCGA+CGG 0.614365 3:+98501254 None:intergenic
ATGATGAACATCAAGAATGT+TGG 0.619679 3:-98498576 MsaT016490.1:CDS
AAGTGTTCAGGTGAAGGATG+TGG 0.620118 3:-98497119 MsaT016490.1:CDS
GGGGTGCAGTATGAATTGCA+GGG 0.623339 3:+98497014 None:intergenic
TCTCGAAAATCTCCATCCGA+CGG 0.623383 3:+98501871 None:intergenic
TATCGAACACCCGCTGCCTG+TGG 0.624335 3:+98501332 None:intergenic
AACTGAATCATCAGACAACA+AGG 0.625525 3:-98498539 MsaT016490.1:CDS
AAGCATAGTCTAATGCCGAC+GGG 0.627336 3:+98501255 None:intergenic
CCCCAATTGATACCAAGACC+TGG 0.628785 3:+98502748 None:intergenic
GAGGGACAATGGAATCAAGA+AGG 0.629853 3:-98502677 MsaT016490.1:CDS
AGGATGTGGTGTGAAGAAAA+GGG 0.633271 3:-98497105 MsaT016490.1:CDS
TGGAAGAAGAGGTTGCAGAA+GGG 0.634753 3:+98496952 None:intergenic
GGTACCCTACAATGTGTCCA+AGG 0.636045 3:-98502784 MsaT016490.1:CDS
ATTGGGTAGTATTGTTACAG+AGG 0.636758 3:-98501096 MsaT016490.1:CDS
ATGAAATCAGACGAGGAAGG+AGG 0.639707 3:+98498625 None:intergenic
ATCTCAAACAAACAAACCGT+CGG 0.645486 3:-98501887 MsaT016490.1:CDS
GAAATTGGTTGGCCAACTGA+TGG 0.651617 3:-98501593 MsaT016490.1:CDS
ACCAAACATCTTCACAATGG+GGG 0.658077 3:-98502514 MsaT016490.1:CDS
TCAAGAATAGTCCATACCCA+AGG 0.659061 3:-98498191 MsaT016490.1:intron
GGGTGCAGTATGAATTGCAG+GGG 0.665109 3:+98497015 None:intergenic
ATGTGGTGTGAAGAAAAGGG+TGG 0.669156 3:-98497102 MsaT016490.1:CDS
TGACAGGAAACGTAAAAGCA+GGG 0.673462 3:-98498325 MsaT016490.1:intron
GATGACATTAATATCAATGG+TGG 0.679350 3:+98498507 None:intergenic
TTAATGAAATCAGACGAGGA+AGG 0.681005 3:+98498622 None:intergenic
CACCAAACATCTTCACAATG+GGG 0.682643 3:-98502515 MsaT016490.1:CDS
TGGACATGGAGACCAAGTGA+AGG 0.682859 3:-98501941 MsaT016490.1:CDS
TAAATTAATGAAATCAGACG+AGG 0.714233 3:+98498618 None:intergenic
GGAATACACCAAAGACACTG+GGG 0.775844 3:+98496995 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 98496947 98502863 98496947 ID=MsaG016490
Chr3 mRNA 98496947 98502863 98496947 ID=MsaT016490.1;Parent=MsaG016490
Chr3 exon 98496947 98497151 98496947 ID=MsaT016490.1.exon7;Parent=MsaT016490.1
Chr3 CDS 98496947 98497151 98496947 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98498192 98498341 98498192 ID=MsaT016490.1.exon6;Parent=MsaT016490.1
Chr3 CDS 98498192 98498341 98498192 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98498442 98498705 98498442 ID=MsaT016490.1.exon5;Parent=MsaT016490.1
Chr3 CDS 98498442 98498705 98498442 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98501008 98501431 98501008 ID=MsaT016490.1.exon4;Parent=MsaT016490.1
Chr3 CDS 98501008 98501431 98501008 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98501519 98501821 98501519 ID=MsaT016490.1.exon3;Parent=MsaT016490.1
Chr3 CDS 98501519 98501821 98501519 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98501863 98502068 98501863 ID=MsaT016490.1.exon2;Parent=MsaT016490.1
Chr3 CDS 98501863 98502068 98501863 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Chr3 exon 98502502 98502863 98502502 ID=MsaT016490.1.exon1;Parent=MsaT016490.1
Chr3 CDS 98502502 98502863 98502502 ID=cds.MsaT016490.1;Parent=MsaT016490.1
Gene Sequence

>MsaT016490.1

ATGGCTGGAGCCGAATTCTCCATAGGTGCACTTTGTTTAATAGTTCTCCTAGCTTATGGTACCCTACAATGTGTCCAAGGAGCAGAGTCTATACCAGGTCTTGGTATCAATTGGGGTGCTCTTGCATCACACCCTATGGATCCTAATATTGTTGCAAATATGTTGAGGGACAATGGAATCAAGAAGGTGAAACTTTTTGATGCAGATCCTTGGATCGTTAGTGCTTTTTCCGGAGACTTTGAAGTCATGGTTGGAATTCCTAATGATCAATTAAGTAAATTTGCTGGAAGTCTTGGAGATTCCGAAGATTGGGTAAAAGAAAATCTCACCAAACATCTTCACAATGGGGGTGTGAATATCAGATACGTAGCAGTTGGAAACGAACCATTCTTGAAAAGCTACGGTGATAAATATGTGAAGAAAACATTTCCGGCTATGCAAAATATTCAAAAGGCTATTGATAAAGCTGGACATGGAGACCAAGTGAAGGTGACGACAGCTTTGAATGCAGATGTTTATGAATCTCAAACAAACAAACCGTCGGATGGAGATTTTCGAGACAACATTCAAGTCGCGTTTCTTGTCAACATTTACCCTTTCCTTAGTCTATATCAAAGTGAAGGTTTTCCACAAGATTTTGCATTCTTTGGTACCAATAGCATGACAATTAGAGACAAAAATGCACAATATAGCAATGTCTTTGATGCAAATTTAGATACACTTGCTTGGGCATTAAAAAAGGCTGGTTACTCCGACATAAAAATTGTTGTTGGTGAAATTGGTTGGCCAACTGATGGTAACATAAATGCTAATGTTAACAATGCAAAAAGATTTTACCAAGGGTTTCTTAAAAACATGGCTAGCAAAAAAGCGTCATTGGGAATTTATCGCTACGATGGAAAGCCAAAGTTTCCTATAGATTTTTCTGGTAAAGGAGAAGAAAAATTGCCACAGGCAGCGGGTGTTCGATACCAAGAACGTAAATGGTGTGTCCTAAGTGCAGATGTTAAAAATATGTCTTTGATCCCGTCGGCATTAGACTATGCTTGTGCTGGTGCTGACTGTACAAGTTTAGGATATGGTTGTTCTTGTGGAAATTTGGGATTGGCTGGTAATGCATCTTTTGCTTTTAACCAGTTTTTTCAAACTAGAGACCAAAGCGTTGAAGCATGCGATTTCAATGGATTGGGTAGTATTGTTACAGAGGATCCATCAAAGGGAACTTGTTTGTTCCCTATAGAACTTGAGAGCAATCCTGGAAATATGCTAACAACAATGCGTATTATGGCAAGCATGGCCATGTATTTTGGAAACCCTAATTCTAACCCTTATCACAATAATAATATATCTCCTCCTCCTTCCTCGTCTGATTTCATTAATTTATCTGATTATCTGGTGCTGGATGATGAACATCAAGAATGTTGGTCACAAAGTACAGGAACTGAATCATCAGACAACAAGGCACCTTCCACCACCATTGATATTAATGTCATCAATCAAGGATTAATTTGTGATGAAATTGAAACCTCTACCAACAAGAACAATAACATGATGCAAGTGAAACGTAAAAGCAGGGAGATGAAGGAAAATACAGTAGACGTGAGCCCAAGAGTGACGTTTAGAACGAGATCGCAGCTTGAGATTATGGATGATGGATTCAAATGGAGGAAGTATGGAAAGAAGTCTGTCAAGAATAGTCCATACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGTGGTGTGAAGAAAAGGGTGGAAAGGGATAGGGAAGATTCAAGCTATGTGCTAACAAGCTATGAAGGTGTTCACAATCATGAAAGCCCCTGCAATTCATACTGCACCCCAGTGTCTTTGGTGTATTCCAATGAATGGCCACAGCAGCACCCTTCTGCAACCTCTTCTTCCAATTAA
Protein sequence

>MsaT016490.1

MAGAEFSIGALCLIVLLAYGTLQCVQGAESIPGLGINWGALASHPMDPNIVANMLRDNGIKKVKLFDADPWIVSAFSGDFEVMVGIPNDQLSKFAGSLGDSEDWVKENLTKHLHNGGVNIRYVAVGNEPFLKSYGDKYVKKTFPAMQNIQKAIDKAGHGDQVKVTTALNADVYESQTNKPSDGDFRDNIQVAFLVNIYPFLSLYQSEGFPQDFAFFGTNSMTIRDKNAQYSNVFDANLDTLAWALKKAGYSDIKIVVGEIGWPTDGNINANVNNAKRFYQGFLKNMASKKASLGIYRYDGKPKFPIDFSGKGEEKLPQAAGVRYQERKWCVLSADVKNMSLIPSALDYACAGADCTSLGYGCSCGNLGLAGNASFAFNQFFQTRDQSVEACDFNGLGSIVTEDPSKGTCLFPIELESNPGNMLTTMRIMASMAMYFGNPNSNPYHNNNISPPPSSSDFINLSDYLVLDDEHQECWSQSTGTESSDNKAPSTTIDINVINQGLICDEIETSTNKNNNMMQVKRKSREMKENTVDVSPRVTFRTRSQLEIMDDGFKWRKYGKKSVKNSPYPRNYYKCSGEGCGVKKRVERDREDSSYVLTSYEGVHNHESPCNSYCTPVSLVYSNEWPQQHPSATSSSN*