AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG016634

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG016634 MtrunA17_Chr3g0131121 90.909 297 26 1 1 296 1 297 0.0 503
MsaG016634 MtrunA17_Chr4g0037141 52.041 294 112 7 1 290 1 269 2.01e-92 275
MsaG016634 MtrunA17_Chr8g0385321 44.179 335 113 9 1 290 1 306 6.96e-84 254
MsaG016634 MtrunA17_Chr5g0435101 71.200 125 36 0 3 127 2 126 2.25e-68 211
MsaG016634 MtrunA17_Chr4g0039971 60.390 154 61 0 1 154 2 155 1.82e-64 206
MsaG016634 MtrunA17_Chr7g0217741 64.286 140 45 1 1 140 1 135 5.01e-64 204
MsaG016634 MtrunA17_Chr3g0115821 58.940 151 59 1 1 151 1 148 9.45e-64 204
MsaG016634 MtrunA17_Chr2g0323411 70.312 128 38 0 1 128 1 128 9.68e-64 203
MsaG016634 MtrunA17_Chr5g0410961 68.702 131 41 0 1 131 1 131 1.13e-63 204
MsaG016634 MtrunA17_Chr4g0058631 54.494 178 66 3 1 170 1 171 1.39e-63 204
MsaG016634 MtrunA17_Chr1g0193371 66.412 131 44 0 1 131 1 131 1.65e-63 204
MsaG016634 MtrunA17_Chr2g0281071 68.992 129 39 1 1 128 1 129 3.14e-63 202
MsaG016634 MtrunA17_Chr4g0044421 53.552 183 77 3 3 184 2 177 3.87e-63 197
MsaG016634 MtrunA17_Chr4g0048511 64.286 140 49 1 1 139 1 140 4.19e-63 203
MsaG016634 MtrunA17_Chr3g0117091 66.667 129 43 0 1 129 1 129 7.59e-63 202
MsaG016634 MtrunA17_Chr5g0434571 65.926 135 46 0 1 135 37 171 1.83e-62 201
MsaG016634 MtrunA17_Chr6g0453471 58.940 151 62 0 1 151 1 151 2.00e-62 201
MsaG016634 MtrunA17_Chr4g0057031 67.692 130 42 0 1 130 1 130 3.29e-62 197
MsaG016634 MtrunA17_Chr4g0042671 64.234 137 49 0 1 137 1 137 3.65e-62 202
MsaG016634 MtrunA17_Chr7g0270891 65.649 131 45 0 1 131 1 131 4.33e-62 200
MsaG016634 MtrunA17_Chr8g0349261 54.494 178 68 4 1 169 1 174 5.02e-62 198
MsaG016634 MtrunA17_Chr1g0211161 65.354 127 44 0 3 129 4 130 2.03e-61 194
MsaG016634 MtrunA17_Chr7g0275911 73.276 116 31 0 1 116 1 116 5.28e-61 194
MsaG016634 MtrunA17_Chr3g0110351 62.774 137 51 0 1 137 1 137 6.68e-61 196
MsaG016634 MtrunA17_Chr3g0121241 68.000 125 40 0 5 129 35 159 1.05e-60 195
MsaG016634 MtrunA17_Chr7g0271241 58.125 160 63 1 1 160 1 156 1.17e-60 197
MsaG016634 MtrunA17_Chr8g0346561 73.276 116 31 0 1 116 1 116 1.28e-60 194
MsaG016634 MtrunA17_Chr4g0070641 74.138 116 30 0 1 116 1 116 1.36e-60 190
MsaG016634 MtrunA17_Chr4g0070611 74.138 116 30 0 1 116 1 116 1.37e-60 195
MsaG016634 MtrunA17_Chr1g0193801 62.595 131 49 0 1 131 1 131 3.74e-60 196
MsaG016634 MtrunA17_Chr3g0103281 57.718 149 61 1 1 147 1 149 3.80e-60 194
MsaG016634 MtrunA17_Chr5g0395281 50.811 185 80 2 1 174 1 185 4.17e-60 193
MsaG016634 MtrunA17_Chr7g0228891 65.891 129 44 0 1 129 1 129 4.02e-59 190
MsaG016634 MtrunA17_Chr1g0203411 68.966 116 36 0 1 116 1 116 7.16e-59 190
MsaG016634 MtrunA17_Chr4g0068061 70.940 117 34 0 1 117 1 117 9.00e-59 191
MsaG016634 MtrunA17_Chr7g0261281 65.414 133 40 1 1 133 1 127 2.24e-58 188
MsaG016634 MtrunA17_Chr7g0274581 45.631 206 98 4 1 206 1 192 2.25e-57 183
MsaG016634 MtrunA17_Chr1g0187761 69.828 116 35 0 1 116 1 116 3.85e-57 184
MsaG016634 MtrunA17_Chr1g0167691 68.103 116 37 0 1 116 1 116 1.68e-55 180
MsaG016634 MtrunA17_Chr2g0309911 61.417 127 49 0 6 132 5 131 1.83e-55 182
MsaG016634 MtrunA17_Chr1g0194951 53.488 172 74 2 1 172 1 166 1.94e-55 183
MsaG016634 MtrunA17_Chr1g0167661 68.103 116 37 0 1 116 1 116 2.20e-55 179
MsaG016634 MtrunA17_Chr2g0330041 61.069 131 51 0 1 131 1 131 6.27e-55 183
MsaG016634 MtrunA17_Chr6g0452271 51.534 163 70 2 1 163 1 154 6.65e-55 181
MsaG016634 MtrunA17_Chr8g0342521 62.602 123 46 0 1 123 1 123 1.67e-54 180
MsaG016634 MtrunA17_Chr8g0342541 60.976 123 48 0 1 123 1 123 2.87e-53 177
MsaG016634 MtrunA17_Chr7g0269831 70.339 118 35 0 1 118 1 118 3.18e-53 177
MsaG016634 MtrunA17_Chr7g0217221 65.517 116 40 0 1 116 1 116 3.98e-53 174
MsaG016634 MtrunA17_Chr1g0151941 40.726 248 115 10 1 230 1 234 3.52e-52 171
MsaG016634 MtrunA17_Chr4g0060721 63.793 116 42 0 1 116 2 117 3.92e-52 174
MsaG016634 MtrunA17_Chr8g0387421 62.931 116 43 0 1 116 1 116 4.32e-52 173
MsaG016634 MtrunA17_Chr8g0342481 56.291 151 57 3 1 144 1 149 1.02e-51 174
MsaG016634 MtrunA17_Chr7g0254411 61.600 125 46 1 1 123 1 125 6.41e-51 171
MsaG016634 MtrunA17_Chr4g0022881 64.035 114 41 0 1 114 1 114 9.41e-51 167
MsaG016634 MtrunA17_Chr3g0092401 62.069 116 44 0 1 116 2 117 5.11e-50 167
MsaG016634 MtrunA17_Chr4g0022891 52.349 149 65 2 1 143 1 149 5.14e-50 166
MsaG016634 MtrunA17_Chr2g0328771 69.903 103 31 0 14 116 22 124 5.35e-50 168
MsaG016634 MtrunA17_Chr3g0135311 52.083 144 62 2 1 143 1 138 9.01e-50 168
MsaG016634 MtrunA17_Chr4g0022931 61.538 117 44 1 1 116 1 117 1.32e-49 165
MsaG016634 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 1.37e-49 167
MsaG016634 MtrunA17_Chr4g0022901 51.299 154 73 2 1 152 1 154 1.65e-49 165
MsaG016634 MtrunA17_Chr2g0311221 65.455 110 38 0 2 111 4 113 3.39e-49 166
MsaG016634 MtrunA17_Chr4g0032401 69.903 103 31 0 14 116 19 121 3.65e-49 166
MsaG016634 MtrunA17_Chr5g0400821 56.250 128 55 1 1 127 1 128 4.43e-49 165
MsaG016634 MtrunA17_Chr6g0453211 63.964 111 40 0 1 111 1 111 5.02e-49 165
MsaG016634 MtrunA17_Chr5g0417821 64.348 115 41 0 14 128 9 123 5.37e-49 164
MsaG016634 MtrunA17_Chr1g0152011 59.167 120 48 1 1 119 1 120 5.58e-49 166
MsaG016634 MtrunA17_Chr4g0055981 58.462 130 48 1 9 138 52 175 6.66e-49 162
MsaG016634 MtrunA17_Chr2g0323351 62.069 116 44 0 1 116 1 116 8.60e-49 162
MsaG016634 MtrunA17_Chr4g0022911 55.714 140 57 2 1 139 1 136 1.86e-48 163
MsaG016634 MtrunA17_Chr4g0028311 59.829 117 46 1 1 116 1 117 5.79e-48 162
MsaG016634 MtrunA17_Chr2g0327351 50.649 154 71 3 1 153 1 150 8.93e-48 162
MsaG016634 MtrunA17_Chr3g0088461 64.815 108 38 0 9 116 19 126 1.19e-47 162
MsaG016634 MtrunA17_Chr7g0264641 57.143 119 50 1 1 118 1 119 1.54e-47 160
MsaG016634 MtrunA17_Chr1g0203441 55.385 130 56 2 1 129 1 129 9.28e-47 158
MsaG016634 MtrunA17_Chr8g0343831 61.207 116 41 1 1 116 1 112 1.23e-46 157
MsaG016634 MtrunA17_Chr6g0470971 44.633 177 94 2 7 183 9 181 5.32e-46 156
MsaG016634 MtrunA17_Chr1g0186061 62.727 110 41 0 6 115 14 123 5.60e-46 155
MsaG016634 MtrunA17_Chr4g0054391 60.909 110 42 1 1 109 1 110 1.37e-45 155
MsaG016634 MtrunA17_Chr1g0168661 62.727 110 41 0 6 115 15 124 2.60e-45 154
MsaG016634 MtrunA17_Chr4g0072751 60.360 111 43 1 1 110 1 111 2.43e-44 154
MsaG016634 MtrunA17_Chr6g0450101 60.169 118 45 1 1 116 1 118 2.99e-44 149
MsaG016634 MtrunA17_Chr7g0228231 66.990 103 34 0 14 116 16 118 9.57e-44 148
MsaG016634 MtrunA17_Chr5g0434911 46.386 166 87 2 7 171 16 180 2.70e-43 149
MsaG016634 MtrunA17_Chr6g0487491 45.294 170 77 4 1 154 1 170 3.01e-43 149
MsaG016634 MtrunA17_Chr7g0247131 61.321 106 37 1 44 149 10 111 3.49e-43 149
MsaG016634 MtrunA17_Chr7g0240821 51.471 136 62 1 16 151 5 136 4.27e-43 147
MsaG016634 MtrunA17_Chr1g0209661 56.667 120 52 0 8 127 23 142 6.93e-43 149
MsaG016634 MtrunA17_Chr8g0354661 65.686 102 35 0 14 115 39 140 8.95e-43 154
MsaG016634 MtrunA17_Chr5g0434931 60.185 108 43 0 14 121 37 144 3.58e-42 146
MsaG016634 MtrunA17_Chr7g0220341 48.485 165 77 5 14 174 27 187 3.82e-42 146
MsaG016634 MtrunA17_Chr1g0194291 64.706 102 36 0 14 115 23 124 5.65e-42 145
MsaG016634 MtrunA17_Chr1g0194301 60.784 102 40 0 14 115 35 136 4.52e-41 143
MsaG016634 MtrunA17_Chr3g0080861 61.765 102 39 0 14 115 39 140 9.11e-41 148
MsaG016634 MtrunA17_Chr3g0099131 62.745 102 38 0 14 115 43 144 1.13e-40 148
MsaG016634 MtrunA17_Chr1g0180391 61.165 103 40 0 14 116 21 123 5.33e-40 139
MsaG016634 MtrunA17_Chr5g0434831 59.434 106 43 0 14 119 9 114 1.44e-39 137
MsaG016634 MtrunA17_Chr7g0228991 60.377 106 42 0 14 119 31 136 1.65e-39 139
MsaG016634 MtrunA17_Chr4g0042611 67.045 88 29 0 1 88 1 88 1.91e-38 130
MsaG016634 MtrunA17_Chr5g0434841 60.377 106 42 0 14 119 22 127 2.03e-38 137
MsaG016634 MtrunA17_Chr2g0294811 63.043 92 34 0 1 92 1 92 2.40e-38 131
MsaG016634 MtrunA17_Chr2g0327821 54.206 107 49 0 9 115 3 109 2.85e-38 135
MsaG016634 MtrunA17_Chr8g0342511 65.517 87 30 0 1 87 1 87 5.01e-38 130
MsaG016634 MtrunA17_Chr8g0360111 61.616 99 38 0 14 112 27 125 6.96e-38 134
MsaG016634 MtrunA17_Chr8g0342531 50.862 116 52 1 1 111 1 116 1.78e-37 130
MsaG016634 MtrunA17_Chr1g0154031 58.824 102 42 0 14 115 78 179 1.79e-37 137
MsaG016634 MtrunA17_Chr4g0030881 52.137 117 49 1 6 115 1 117 1.87e-37 133
MsaG016634 MtrunA17_Chr2g0322521 61.765 102 39 0 14 115 31 132 5.98e-37 135
MsaG016634 MtrunA17_Chr2g0293911 63.366 101 37 0 14 114 26 126 1.53e-36 133
MsaG016634 MtrunA17_Chr4g0068921 61.386 101 39 0 14 114 26 126 1.80e-36 129
MsaG016634 MtrunA17_Chr8g0342461 62.222 90 33 1 1 89 1 90 2.70e-36 127
MsaG016634 MtrunA17_Chr8g0342471 62.222 90 33 1 1 89 1 90 7.39e-36 125
MsaG016634 MtrunA17_Chr1g0192411 48.739 119 55 1 14 126 14 132 1.17e-35 132
MsaG016634 MtrunA17_Chr5g0440781 52.212 113 52 2 12 123 12 123 5.50e-35 125
MsaG016634 MtrunA17_Chr5g0440761 52.212 113 52 2 12 123 12 123 2.58e-34 125
MsaG016634 MtrunA17_Chr5g0441141 52.212 113 52 2 12 123 12 123 3.38e-34 125
MsaG016634 MtrunA17_Chr2g0323321 59.783 92 36 1 1 92 1 91 1.90e-33 118
MsaG016634 MtrunA17_Chr5g0395221 59.091 88 36 0 1 88 1 88 5.16e-33 116
MsaG016634 MtrunA17_Chr8g0334881 50.000 108 53 1 8 114 6 113 1.62e-31 119
MsaG016634 MtrunA17_Chr5g0401731 41.667 156 76 2 14 155 15 169 2.22e-30 116
MsaG016634 MtrunA17_Chr5g0441131 48.673 113 56 2 12 123 9 120 6.60e-30 111
MsaG016634 MtrunA17_Chr4g0013361 34.375 192 112 5 8 193 6 189 4.39e-29 112
MsaG016634 MtrunA17_Chr7g0229101 67.143 70 23 0 44 113 4 73 1.56e-28 108
MsaG016634 MtrunA17_Chr3g0093811 53.488 86 40 0 44 129 14 99 5.00e-28 108
MsaG016634 MtrunA17_Chr3g0099141 55.556 81 36 0 14 94 42 122 1.81e-27 103
MsaG016634 MtrunA17_Chr5g0434901 68.182 66 21 0 48 113 9 74 2.30e-27 103
MsaG016634 MtrunA17_Chr7g0229131 61.972 71 27 0 44 114 4 74 3.29e-27 104
MsaG016634 MtrunA17_Chr5g0429661 38.776 147 81 5 14 154 122 265 5.48e-27 108
MsaG016634 MtrunA17_Chr6g0454921 48.624 109 55 1 14 122 15 122 9.51e-27 104
MsaG016634 MtrunA17_Chr4g0053431 40.252 159 80 4 14 166 5 154 1.42e-26 105
MsaG016634 MtrunA17_Chr4g0008551 48.544 103 50 2 14 115 38 138 1.03e-25 104
MsaG016634 MtrunA17_Chr3g0117511 46.667 120 58 4 3 119 170 286 1.25e-25 105
MsaG016634 MtrunA17_Chr7g0238631 34.562 217 122 5 14 220 113 319 1.58e-25 106
MsaG016634 MtrunA17_Chr4g0058991 48.598 107 51 3 14 119 209 312 1.77e-25 105
MsaG016634 MtrunA17_Chr3g0133601 40.845 142 73 3 14 145 37 177 4.55e-25 100
MsaG016634 MtrunA17_Chr5g0437321 38.690 168 84 5 14 178 19 170 6.01e-24 98.6
MsaG016634 MtrunA17_Chr6g0480581 41.228 114 58 3 14 120 4 115 6.98e-24 97.4
MsaG016634 MtrunA17_Chr7g0228531 47.059 102 52 2 14 115 220 319 7.22e-23 97.8
MsaG016634 MtrunA17_Chr5g0425591 50.602 83 40 1 12 93 9 91 8.13e-23 90.5
MsaG016634 MtrunA17_Chr3g0139671 40.952 105 61 1 14 118 85 188 8.36e-23 98.6
MsaG016634 MtrunA17_Chr5g0417621 43.689 103 55 2 14 115 134 234 1.61e-22 96.7
MsaG016634 MtrunA17_Chr1g0157731 41.905 105 60 1 14 118 91 194 3.46e-22 96.7
MsaG016634 MtrunA17_Chr4g0042501 39.669 121 69 3 14 133 105 222 5.00e-22 95.1
MsaG016634 MtrunA17_Chr5g0397841 46.875 96 50 1 14 109 110 204 1.24e-21 94.4
MsaG016634 MtrunA17_Chr3g0125801 45.631 103 53 2 14 115 16 116 7.40e-21 90.1
MsaG016634 MtrunA17_Chr7g0228401 46.739 92 47 2 25 116 290 379 2.21e-20 90.9
MsaG016634 MtrunA17_Chr1g0177901 45.652 92 48 2 25 116 5 94 5.38e-20 86.3
MsaG016634 MtrunA17_Chr6g0460661 38.776 98 59 1 13 110 15 111 9.06e-20 84.3
MsaG016634 MtrunA17_Chr7g0233061 43.243 111 47 4 12 116 178 278 2.85e-19 86.7
MsaG016634 MtrunA17_Chr6g0453751 46.067 89 39 2 14 93 22 110 3.26e-19 82.0
MsaG016634 MtrunA17_Chr7g0238651 38.211 123 73 2 13 132 6 128 5.32e-19 85.9
MsaG016634 MtrunA17_Chr6g0460671 36.364 132 77 2 14 139 99 229 7.60e-19 85.5
MsaG016634 MtrunA17_Chr7g0228481 41.818 110 59 3 14 120 220 327 1.82e-18 85.1
MsaG016634 MtrunA17_Chr7g0254261 37.069 116 65 3 1 115 81 189 1.36e-17 82.0
MsaG016634 MtrunA17_Chr3g0145551 67.347 49 14 1 91 137 1 49 1.27e-16 73.6
MsaG016634 MtrunA17_Chr5g0434871 64.444 45 16 0 74 118 2 46 1.95e-16 72.4
MsaG016634 MtrunA17_Chr5g0416341 36.364 99 62 1 17 115 29 126 8.03e-16 77.4
MsaG016634 MtrunA17_Chr5g0395231 55.556 54 24 0 78 131 5 58 1.21e-14 72.0
MsaG016634 MtrunA17_Chr8g0362231 30.818 159 100 4 16 173 24 173 1.54e-14 73.6
MsaG016634 MtrunA17_Chr1g0193901 55.769 52 23 0 17 68 17 68 1.72e-14 68.6
MsaG016634 MtrunA17_Chr1g0193891 55.769 52 23 0 17 68 17 68 1.72e-14 68.6
MsaG016634 MtrunA17_Chr1g0193871 55.769 52 23 0 17 68 17 68 1.72e-14 68.6
MsaG016634 MtrunA17_Chr1g0193881 55.769 52 23 0 17 68 17 68 1.72e-14 68.6
MsaG016634 MtrunA17_Chr7g0247141 60.417 48 18 1 1 47 1 48 2.16e-14 66.6
MsaG016634 MtrunA17_Chr4g0042621 58.000 50 21 0 88 137 14 63 5.42e-14 71.2
MsaG016634 MtrunA17_Chr5g0434891 65.909 44 15 0 77 120 1 44 1.52e-13 67.0
MsaG016634 MtrunA17_Chr2g0322831 61.538 39 15 0 70 108 34 72 1.25e-12 62.4
MsaG016634 MtrunA17_Chr7g0233151 47.059 51 27 0 65 115 1 51 1.51e-11 62.0
MsaG016634 MtrunA17_Chr2g0294821 30.000 160 85 7 89 238 5 147 3.22e-11 62.4
MsaG016634 MtrunA17_Chr3g0104491 37.975 79 42 3 53 125 1 78 7.81e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG016634 AT2G16720.1 61.883 223 60 4 1 222 1 199 3.09e-89 267
MsaG016634 AT4G09460.1 60.000 225 70 5 1 223 1 207 8.21e-88 262
MsaG016634 AT4G38620.1 74.390 164 37 1 1 159 1 164 1.07e-87 263
MsaG016634 AT1G22640.1 50.916 273 102 7 1 268 1 246 4.74e-85 256
MsaG016634 AT4G34990.1 82.963 135 23 0 1 135 1 135 4.82e-83 251
MsaG016634 AT1G35515.1 71.429 154 41 2 1 154 1 151 1.48e-76 233
MsaG016634 AT5G16770.4 63.576 151 55 0 1 151 1 151 4.90e-69 217
MsaG016634 AT5G16770.3 63.576 151 55 0 1 151 1 151 4.90e-69 217
MsaG016634 AT5G16770.1 63.576 151 55 0 1 151 1 151 1.32e-68 216
MsaG016634 AT5G16770.2 63.576 151 55 0 1 151 1 151 1.32e-68 216
MsaG016634 AT3G02940.2 71.756 131 37 0 1 131 1 131 6.23e-68 214
MsaG016634 AT3G02940.1 71.756 131 37 0 1 131 1 131 1.30e-67 214
MsaG016634 AT3G02940.3 71.756 131 37 0 1 131 1 131 1.30e-67 214
MsaG016634 AT4G28110.1 68.750 128 40 0 1 128 1 128 5.54e-66 208
MsaG016634 AT4G21440.1 41.993 281 136 5 1 262 1 273 1.16e-65 209
MsaG016634 AT5G60890.1 52.195 205 85 5 1 205 1 192 1.65e-65 207
MsaG016634 AT4G05100.1 69.767 129 38 1 1 128 1 129 1.30e-64 206
MsaG016634 AT4G12350.1 55.814 172 65 1 1 161 1 172 2.94e-64 204
MsaG016634 AT3G13540.1 68.504 127 40 0 4 130 15 141 1.32e-63 201
MsaG016634 AT1G57560.2 63.768 138 50 0 1 138 1 138 1.34e-63 202
MsaG016634 AT3G61250.1 67.442 129 42 0 1 129 1 129 2.30e-63 202
MsaG016634 AT5G15310.4 62.329 146 54 1 1 146 1 145 3.63e-63 199
MsaG016634 AT3G01140.2 64.964 137 48 0 1 137 1 137 4.19e-63 202
MsaG016634 AT5G26660.1 67.442 129 42 0 1 129 1 129 6.36e-63 202
MsaG016634 AT5G15310.2 62.329 146 54 1 1 146 1 145 7.75e-63 201
MsaG016634 AT1G57560.1 66.412 131 44 0 1 131 1 131 7.95e-63 201
MsaG016634 AT4G22680.1 59.146 164 63 2 1 161 1 163 8.09e-63 199
MsaG016634 AT5G15310.1 62.329 146 54 1 1 146 1 145 8.53e-63 201
MsaG016634 AT5G16600.1 66.667 135 45 0 1 135 1 135 1.45e-62 201
MsaG016634 AT5G10280.1 64.885 131 46 0 1 131 1 131 7.73e-62 199
MsaG016634 AT1G09540.1 64.885 131 46 0 1 131 1 131 8.39e-62 200
MsaG016634 AT1G34670.1 46.296 216 104 2 1 215 1 205 1.00e-61 200
MsaG016634 AT4G01680.3 48.969 194 97 2 1 192 1 194 1.60e-61 195
MsaG016634 AT5G56110.1 61.538 143 53 1 1 141 1 143 4.32e-61 197
MsaG016634 AT1G66230.1 65.385 130 45 0 1 130 1 130 7.02e-61 195
MsaG016634 AT1G74080.1 62.044 137 52 0 1 137 1 137 7.20e-61 197
MsaG016634 AT4G01680.1 48.969 194 97 2 1 192 1 194 1.26e-60 196
MsaG016634 AT5G61420.2 48.544 206 82 4 1 193 1 195 1.79e-60 196
MsaG016634 AT1G18570.1 62.411 141 52 1 1 140 1 141 2.94e-60 196
MsaG016634 AT5G65230.1 63.359 131 48 0 1 131 1 131 3.10e-60 194
MsaG016634 AT5G14340.1 64.706 136 48 0 1 136 13 148 5.00e-60 192
MsaG016634 AT3G01140.1 64.179 134 48 0 4 137 47 180 6.26e-60 196
MsaG016634 AT5G07690.1 64.341 129 46 0 1 129 1 129 1.00e-59 194
MsaG016634 AT2G31180.1 54.190 179 70 3 1 167 1 179 1.29e-59 191
MsaG016634 AT1G06180.1 72.650 117 32 0 1 117 1 117 4.69e-59 189
MsaG016634 AT5G49330.1 72.034 118 33 0 1 118 1 118 8.22e-59 191
MsaG016634 AT3G23250.1 49.733 187 89 3 1 182 1 187 3.01e-58 188
MsaG016634 AT5G54230.1 67.969 128 41 0 1 128 1 128 5.50e-58 189
MsaG016634 AT4G17785.2 64.341 129 45 1 1 128 1 129 6.13e-58 189
MsaG016634 AT4G17785.1 64.341 129 45 1 1 128 1 129 7.51e-58 189
MsaG016634 AT2G47460.1 56.173 162 69 1 1 160 1 162 3.34e-57 188
MsaG016634 AT5G07700.1 61.364 132 51 0 1 132 1 132 3.52e-57 187
MsaG016634 AT5G07700.2 61.364 132 51 0 1 132 1 132 3.52e-57 187
MsaG016634 AT4G01680.2 46.117 206 97 3 1 192 1 206 4.34e-57 187
MsaG016634 AT5G62320.1 48.168 191 84 4 2 177 3 193 8.49e-57 183
MsaG016634 AT3G12720.1 62.810 121 45 0 6 126 16 136 4.71e-55 181
MsaG016634 AT3G13890.2 66.949 118 39 0 1 118 1 118 4.73e-55 182
MsaG016634 AT3G62610.1 69.231 117 36 0 1 117 1 117 5.99e-55 182
MsaG016634 AT1G16490.1 52.532 158 71 1 2 155 4 161 9.10e-54 176
MsaG016634 AT1G56160.1 66.957 115 38 0 2 116 4 118 1.39e-53 177
MsaG016634 AT1G79180.1 66.087 115 39 0 2 116 4 118 1.53e-52 174
MsaG016634 AT1G74650.1 65.517 116 40 0 1 116 1 116 2.01e-52 175
MsaG016634 AT3G28470.1 57.692 130 55 0 1 130 1 130 4.05e-52 174
MsaG016634 AT3G13890.1 62.205 127 39 1 1 118 1 127 6.42e-52 174
MsaG016634 AT3G12820.1 64.957 117 41 0 3 119 5 121 1.02e-51 170
MsaG016634 AT1G63910.1 56.028 141 56 1 1 135 1 141 1.73e-51 173
MsaG016634 AT1G08810.1 65.517 116 40 0 1 116 1 116 2.61e-51 170
MsaG016634 AT5G62470.2 64.655 116 41 0 1 116 1 116 4.95e-51 172
MsaG016634 AT3G47600.1 58.088 136 47 1 1 136 1 126 4.98e-51 171
MsaG016634 AT1G74430.1 55.797 138 59 1 1 138 1 136 5.35e-51 169
MsaG016634 AT5G14750.1 52.667 150 68 1 14 163 18 164 1.34e-50 166
MsaG016634 AT3G28910.1 58.462 130 52 1 1 130 1 128 4.45e-50 168
MsaG016634 AT5G62470.1 64.655 116 40 1 1 116 1 115 1.33e-49 168
MsaG016634 AT5G40330.1 65.138 109 37 1 9 116 8 116 4.91e-49 162
MsaG016634 AT3G08500.1 65.741 108 37 0 9 116 27 134 1.31e-48 165
MsaG016634 AT5G12870.1 68.932 103 32 0 14 116 20 122 1.57e-48 163
MsaG016634 AT5G57620.1 54.478 134 60 1 1 133 1 134 2.47e-48 164
MsaG016634 AT1G18710.1 54.264 129 59 0 1 129 1 129 2.55e-48 162
MsaG016634 AT5G23000.1 41.667 216 100 5 1 200 1 206 3.09e-48 164
MsaG016634 AT5G65790.1 58.333 120 49 1 1 119 1 120 6.62e-48 164
MsaG016634 AT4G37780.1 59.167 120 48 1 1 119 1 120 1.60e-47 161
MsaG016634 AT2G36890.1 55.118 127 56 1 1 126 1 127 4.55e-47 160
MsaG016634 AT2G36890.2 55.118 127 56 1 1 126 42 168 7.20e-47 160
MsaG016634 AT3G27920.1 60.684 117 43 1 8 121 10 126 1.02e-46 157
MsaG016634 AT5G35550.1 64.815 108 38 0 9 116 11 118 1.13e-46 157
MsaG016634 AT3G49690.1 56.667 120 51 1 1 119 1 120 2.06e-46 159
MsaG016634 AT1G79180.2 51.351 148 39 1 2 116 4 151 8.46e-46 157
MsaG016634 AT3G01530.1 66.990 103 34 0 14 116 27 129 5.14e-45 152
MsaG016634 AT5G52600.1 54.615 130 50 1 9 129 9 138 1.30e-44 150
MsaG016634 AT3G24310.1 62.727 110 41 0 9 118 15 124 9.72e-44 150
MsaG016634 AT3G30210.1 43.147 197 104 2 14 210 29 217 1.11e-43 150
MsaG016634 AT1G22640.3 42.593 216 92 7 58 268 1 189 1.28e-43 148
MsaG016634 AT4G13480.1 63.551 107 39 0 9 115 3 109 2.01e-43 149
MsaG016634 AT5G40350.1 62.617 107 40 0 14 120 19 125 8.00e-43 146
MsaG016634 AT3G27810.1 54.615 130 53 1 14 137 22 151 8.59e-43 147
MsaG016634 AT4G26930.1 47.712 153 78 1 14 166 21 171 5.52e-42 149
MsaG016634 AT2G32460.1 62.745 102 38 0 14 115 20 121 9.09e-42 150
MsaG016634 AT2G32460.2 62.745 102 38 0 14 115 8 109 9.20e-42 150
MsaG016634 AT3G48920.1 58.491 106 44 0 9 114 15 120 1.30e-41 145
MsaG016634 AT2G26960.1 60.377 106 42 0 9 114 17 122 2.73e-41 148
MsaG016634 AT1G48000.1 62.376 101 38 0 14 114 34 134 3.93e-41 143
MsaG016634 AT5G55020.1 64.078 103 37 0 14 116 28 130 3.95e-41 149
MsaG016634 AT2G47190.1 42.945 163 89 2 8 168 16 176 5.16e-41 143
MsaG016634 AT5G06100.1 59.804 102 41 0 14 115 34 135 5.58e-41 147
MsaG016634 AT3G11440.2 60.784 102 40 0 14 115 43 144 6.55e-41 148
MsaG016634 AT1G25340.1 55.000 120 54 0 8 127 14 133 1.21e-40 143
MsaG016634 AT5G26660.2 71.765 85 24 0 45 129 14 98 1.59e-40 144
MsaG016634 AT5G06100.5 59.804 102 41 0 14 115 34 135 2.25e-40 147
MsaG016634 AT5G06100.2 59.804 102 41 0 14 115 34 135 2.25e-40 147
MsaG016634 AT5G06100.3 59.804 102 41 0 14 115 34 135 2.25e-40 147
MsaG016634 AT5G06100.4 59.804 102 41 0 14 115 34 135 2.25e-40 147
MsaG016634 AT5G52260.1 51.825 137 64 1 1 137 1 135 2.74e-40 141
MsaG016634 AT3G11440.3 60.784 102 40 0 14 115 43 144 3.12e-40 147
MsaG016634 AT3G11440.4 60.784 102 40 0 14 115 43 144 3.12e-40 147
MsaG016634 AT3G11440.1 60.784 102 40 0 14 115 43 144 3.12e-40 147
MsaG016634 AT4G25560.1 59.434 106 43 0 10 115 8 113 6.23e-40 141
MsaG016634 AT3G53200.1 59.813 107 43 0 9 115 6 112 1.70e-39 138
MsaG016634 AT1G68320.1 60.377 106 42 0 10 115 17 122 4.06e-39 139
MsaG016634 AT5G59780.3 56.075 107 47 0 9 115 5 111 9.31e-39 136
MsaG016634 AT3G46130.1 55.556 108 48 0 8 115 5 112 1.56e-38 137
MsaG016634 AT1G66370.1 56.522 115 46 1 1 115 1 111 2.38e-38 135
MsaG016634 AT5G14750.3 61.386 101 33 2 40 140 13 107 2.86e-37 130
MsaG016634 AT3G06490.1 63.366 101 37 0 14 114 21 121 9.11e-37 134
MsaG016634 AT1G25340.2 52.500 120 52 1 8 127 14 128 2.27e-36 131
MsaG016634 AT5G49620.1 60.748 107 42 0 8 114 22 128 2.29e-36 132
MsaG016634 AT1G25340.3 52.500 120 52 1 8 127 14 128 4.90e-36 131
MsaG016634 AT1G66380.1 62.745 102 38 0 14 115 10 111 8.55e-36 125
MsaG016634 AT1G56650.1 61.765 102 39 0 14 115 10 111 3.13e-34 125
MsaG016634 AT1G66390.1 61.765 102 39 0 14 115 10 111 1.33e-33 123
MsaG016634 AT3G12820.2 72.603 73 20 0 47 119 1 73 2.21e-33 121
MsaG016634 AT5G49620.2 53.719 121 42 1 8 114 22 142 1.31e-32 122
MsaG016634 AT3G60460.1 51.376 109 52 1 7 114 6 114 1.37e-31 119
MsaG016634 AT5G35550.2 67.532 77 25 0 40 116 45 121 1.46e-31 118
MsaG016634 AT3G47600.2 59.783 92 27 1 45 136 39 120 4.76e-31 119
MsaG016634 AT2G26950.1 45.133 113 61 1 9 121 13 124 2.52e-30 118
MsaG016634 AT1G71030.1 56.667 90 38 1 38 127 7 95 3.27e-30 113
MsaG016634 AT1G71030.2 62.338 77 29 0 51 127 5 81 3.79e-30 112
MsaG016634 AT3G53200.2 67.606 71 23 0 45 115 9 79 3.90e-29 110
MsaG016634 AT3G46130.3 64.384 73 26 0 43 115 8 80 1.22e-28 110
MsaG016634 AT5G59780.2 66.197 71 24 0 45 115 20 90 2.79e-28 108
MsaG016634 AT3G46130.4 66.197 71 24 0 45 115 20 90 3.32e-28 108
MsaG016634 AT3G27810.2 51.515 99 42 1 45 137 4 102 3.58e-28 107
MsaG016634 AT3G09230.1 51.402 107 43 2 14 116 55 156 1.32e-27 110
MsaG016634 AT5G40350.2 60.526 76 30 0 45 120 5 80 1.44e-27 105
MsaG016634 AT3G27785.1 49.057 106 52 2 14 119 189 292 1.81e-27 110
MsaG016634 AT5G40360.1 44.068 118 64 2 1 118 145 260 1.99e-27 109
MsaG016634 AT1G18960.1 42.500 120 62 4 13 130 9 123 2.23e-27 108
MsaG016634 AT5G14750.4 74.576 59 15 0 58 116 1 59 2.34e-27 104
MsaG016634 AT5G14750.2 74.576 59 15 0 58 116 1 59 2.34e-27 104
MsaG016634 AT5G58850.1 39.583 144 84 2 14 156 105 246 9.56e-27 108
MsaG016634 AT4G18770.1 40.972 144 73 4 14 153 217 352 1.11e-26 108
MsaG016634 AT2G39880.1 49.057 106 45 2 14 115 50 150 2.08e-26 107
MsaG016634 AT3G23250.2 48.000 100 50 1 58 155 1 100 2.76e-26 103
MsaG016634 AT1G66380.3 66.667 72 24 0 44 115 7 78 1.58e-25 98.2
MsaG016634 AT2G23290.1 50.000 102 50 1 14 115 13 113 2.42e-25 103
MsaG016634 AT5G67300.1 40.714 140 76 4 14 149 6 142 3.45e-25 102
MsaG016634 AT5G02320.1 44.860 107 50 2 14 116 127 228 5.17e-25 105
MsaG016634 AT5G02320.2 44.860 107 50 2 14 116 127 228 5.17e-25 105
MsaG016634 AT5G02320.3 44.860 107 50 2 14 116 67 168 8.23e-25 103
MsaG016634 AT3G50060.1 45.098 102 55 1 14 115 6 106 1.47e-24 100
MsaG016634 AT3G55730.1 49.515 103 49 2 14 115 56 156 1.48e-24 102
MsaG016634 AT5G11050.1 45.631 103 53 2 14 115 105 205 1.53e-24 102
MsaG016634 AT4G37260.1 47.059 102 53 1 14 115 13 113 2.15e-24 100
MsaG016634 AT3G09370.2 45.283 106 49 2 14 115 135 235 5.00e-24 102
MsaG016634 AT3G09370.2 37.000 100 61 2 14 112 83 181 5.75e-13 69.3
MsaG016634 AT3G09370.1 45.283 106 49 2 14 115 130 230 5.18e-24 102
MsaG016634 AT3G09370.1 37.000 100 61 2 14 112 78 176 6.16e-13 69.3
MsaG016634 AT3G09370.3 43.089 123 56 3 14 127 143 260 8.04e-24 101
MsaG016634 AT3G09370.3 37.000 100 61 2 14 112 91 189 6.67e-13 69.3
MsaG016634 AT1G69560.1 42.202 109 60 2 9 116 102 208 2.63e-23 97.8
MsaG016634 AT1G69560.2 42.202 109 60 2 9 116 118 224 2.64e-23 98.2
MsaG016634 AT5G11510.3 42.991 107 56 2 14 118 81 184 9.56e-23 99.0
MsaG016634 AT5G11510.3 33.333 102 66 2 12 112 27 127 7.72e-11 63.2
MsaG016634 AT5G11510.1 42.991 107 56 2 14 118 81 184 9.56e-23 99.0
MsaG016634 AT5G11510.1 33.333 102 66 2 12 112 27 127 7.72e-11 63.2
MsaG016634 AT5G11510.4 42.991 107 56 2 14 118 81 184 9.56e-23 99.0
MsaG016634 AT5G11510.4 33.333 102 66 2 12 112 27 127 7.72e-11 63.2
MsaG016634 AT1G22640.2 34.946 186 89 7 88 268 16 174 1.33e-22 92.8
MsaG016634 AT2G25230.1 41.026 117 68 1 4 120 16 131 1.43e-22 94.0
MsaG016634 AT5G11510.2 42.991 107 56 2 14 118 81 184 1.50e-22 98.2
MsaG016634 AT5G11510.2 33.333 102 66 2 12 112 27 127 7.61e-11 63.2
MsaG016634 AT5G11510.5 42.991 107 56 2 14 118 81 184 1.56e-22 98.2
MsaG016634 AT5G11510.5 33.333 102 66 2 12 112 27 127 7.01e-11 63.2
MsaG016634 AT1G26780.1 43.689 103 55 2 14 115 98 198 1.92e-22 94.7
MsaG016634 AT1G17950.1 39.535 129 68 4 13 137 4 126 2.46e-22 93.6
MsaG016634 AT1G26780.2 43.689 103 55 2 14 115 98 198 2.78e-22 95.5
MsaG016634 AT4G32730.5 39.640 111 63 2 14 121 87 196 1.18e-21 95.5
MsaG016634 AT4G32730.4 39.640 111 63 2 14 121 87 196 1.18e-21 95.5
MsaG016634 AT4G32730.3 39.640 111 63 2 14 121 87 196 1.18e-21 95.5
MsaG016634 AT4G32730.2 39.640 111 63 2 14 121 87 196 1.18e-21 95.5
MsaG016634 AT4G32730.1 39.640 111 63 2 14 121 87 196 1.31e-21 95.5
MsaG016634 AT1G73410.1 42.308 104 57 2 13 115 5 106 2.00e-20 88.6
MsaG016634 AT1G73410.2 42.308 104 57 2 13 115 5 106 4.44e-20 86.7
MsaG016634 AT1G66380.2 56.962 79 34 0 14 92 10 88 4.66e-20 84.0
MsaG016634 AT3G29020.1 36.538 104 65 1 13 116 64 166 4.97e-20 87.0
MsaG016634 AT3G29020.2 36.538 104 65 1 13 116 66 168 5.04e-20 88.6
MsaG016634 AT5G17800.1 36.508 126 79 1 13 138 92 216 1.89e-19 87.0
MsaG016634 AT4G33450.1 35.398 113 67 2 3 115 13 119 6.25e-19 84.3
MsaG016634 AT4G00540.2 42.857 105 58 1 14 116 103 207 4.25e-18 84.3
MsaG016634 AT5G61420.1 62.500 56 21 0 81 136 2 57 6.33e-18 82.4
MsaG016634 AT4G00540.1 42.857 105 58 1 14 116 101 205 8.18e-18 83.6
MsaG016634 AT5G40430.1 36.036 111 69 1 4 114 44 152 1.24e-17 80.9
MsaG016634 AT2G37630.1 34.746 118 75 1 17 132 7 124 5.94e-16 77.8
MsaG016634 AT5G39700.1 37.000 100 62 1 15 114 57 155 7.37e-16 74.7
MsaG016634 AT4G28110.2 70.732 41 12 0 88 128 4 44 2.42e-15 73.6
MsaG016634 AT2G02820.1 37.000 100 62 1 16 115 32 130 4.68e-15 75.5
MsaG016634 AT1G14350.2 37.374 99 61 1 17 115 28 125 4.81e-15 75.5
MsaG016634 AT1G14350.1 37.374 99 61 1 17 115 28 125 4.81e-15 75.5
MsaG016634 AT2G02820.2 37.000 100 62 1 16 115 32 130 5.80e-15 75.5
MsaG016634 AT2G02820.3 37.374 99 61 1 17 115 33 130 7.25e-15 74.3
MsaG016634 AT5G15310.3 52.381 63 29 1 84 146 5 66 1.62e-14 72.0
MsaG016634 AT5G59780.1 60.870 46 18 0 70 115 1 46 6.35e-14 68.9
MsaG016634 AT3G46130.2 60.870 46 18 0 70 115 1 46 9.77e-14 68.9
MsaG016634 AT5G14340.2 59.184 49 20 0 88 136 10 58 1.53e-13 68.2
MsaG016634 AT4G25560.2 65.116 43 15 0 73 115 5 47 1.84e-13 68.6
MsaG016634 AT3G28910.2 53.704 54 23 1 77 130 1 52 1.06e-12 67.0
MsaG016634 AT1G74650.3 67.500 40 13 0 77 116 1 40 1.71e-12 66.6
MsaG016634 AT3G18100.4 34.545 110 66 2 12 121 383 486 1.89e-11 65.1
MsaG016634 AT3G18100.1 34.545 110 66 2 12 121 544 647 2.30e-11 64.7
MsaG016634 AT3G18100.2 34.545 110 66 2 12 121 331 434 3.14e-11 64.3
MsaG016634 AT3G18100.3 34.545 110 66 2 12 121 496 599 3.38e-11 64.3
MsaG016634 AT1G74430.2 41.935 62 34 1 77 138 8 67 5.88e-11 61.2

Find 55 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGTCTTTGTTATGATCT+AGG 0.189484 3:+100150809 MsaT016634.1:CDS
ATGTCATCATCAACTAAATT+TGG 0.297289 3:+100150673 MsaT016634.1:CDS
ATCTCATTATCTGTTCTTCC+TGG 0.309062 3:-100150338 None:intergenic
ATTAACCTCCACAGCTTACT+TGG 0.332487 3:+100149691 MsaT016634.1:CDS
TGTTATATACCAGCAGCTTT+TGG 0.337054 3:-100149452 None:intergenic
TATGCCAATACAAAGATTAA+TGG 0.347631 3:+100150587 MsaT016634.1:CDS
ATTAACTACATCAAGCTTCA+TGG 0.350360 3:+100149407 MsaT016634.1:CDS
GGTTCCATTAATCTTTGTAT+TGG 0.365810 3:-100150591 None:intergenic
AGCATTAGCTGGTGGAATTA+TGG 0.390398 3:-100150459 None:intergenic
ATAATGAGATCAAGAATTAC+TGG 0.409059 3:+100150351 MsaT016634.1:CDS
TGTGTCTTTGTTATGATCTA+GGG 0.410522 3:+100150810 MsaT016634.1:CDS
AGCTTCATGGAGAAGGTTGT+TGG 0.413051 3:+100149420 MsaT016634.1:CDS
AAATCTATACATATTATTAT+CGG 0.425442 3:-100150897 None:intergenic
AAGTTTCCTCTCTTGAGATC+AGG 0.446834 3:-100149643 None:intergenic
CTAAATTTGGACCTTTCCAT+TGG 0.452593 3:+100150686 MsaT016634.1:CDS
TTAAGTGGCCGATGAGTTTG+AGG 0.457946 3:-100150416 None:intergenic
ATGTTCTTAACGTTGCTTGT+GGG 0.482908 3:-100150503 None:intergenic
TGTAGCAACAGTGTTACCTA+TGG 0.497195 3:-100150867 None:intergenic
ATTGACACTGCAGCATTAGC+TGG 0.511707 3:-100150470 None:intergenic
AGCACACAAACAAAGGTGCT+TGG 0.518793 3:+100149360 MsaT016634.1:CDS
TGAATCTTCACATACCAACT+TGG 0.519982 3:-100150612 None:intergenic
AGGTCTCTTCCAAAAGCTGC+TGG 0.531940 3:+100149443 MsaT016634.1:CDS
TTAATAGCTGCTAGATTACC+AGG 0.539767 3:+100150320 MsaT016634.1:CDS
TAAGTGGCCGATGAGTTTGA+GGG 0.546540 3:-100150415 None:intergenic
GATGCCGTTGAGTCGTTAAG+TGG 0.548294 3:-100150431 None:intergenic
TACATCAAGCTTCATGGAGA+AGG 0.549347 3:+100149413 MsaT016634.1:CDS
AAAGATTAATGGAACCAAGT+TGG 0.550100 3:+100150598 MsaT016634.1:CDS
TTCATGGAGAAGGTTGTTGG+AGG 0.555813 3:+100149423 MsaT016634.1:CDS
TGTTTCCAAGTAAGCTGTGG+AGG 0.565475 3:-100149696 None:intergenic
TTGATGATGACATGCTTCCT+CGG 0.566206 3:-100150663 None:intergenic
CTTTGTTGCAGTAACACACT+TGG 0.573538 3:-100150844 None:intergenic
GAGTTTGAGGGTCGACTCCA+CGG 0.578295 3:-100150403 None:intergenic
ATGTGACGACGGAAGACCAA+TGG 0.581004 3:-100150702 None:intergenic
AGCTGGTGGAATTATGGTGG+TGG 0.582405 3:-100150453 None:intergenic
GTGTGCTCTTTCTCACAACA+AGG 0.601144 3:-100149344 None:intergenic
CTAAGACCTGATCTCAAGAG+AGG 0.602241 3:+100149637 MsaT016634.1:CDS
TGTTACTGCAACAAAGCCAT+AGG 0.607868 3:+100150851 MsaT016634.1:CDS
ACTTGTTTCCAAGTAAGCTG+TGG 0.613381 3:-100149699 None:intergenic
TCAAATTCAAATAACAGTAG+CGG 0.614878 3:+100150632 MsaT016634.1:CDS
GAGAAAGAGCACACAAACAA+AGG 0.616295 3:+100149353 MsaT016634.1:CDS
CATGTTCTTAACGTTGCTTG+TGG 0.617877 3:-100150504 None:intergenic
AAGCGAAAACTCTACAGCCG+TGG 0.621802 3:+100150386 MsaT016634.1:CDS
GCAAGAGTTGCAGATTGAGA+TGG 0.624955 3:+100149605 MsaT016634.1:CDS
GAGTCGACCCTCAAACTCAT+CGG 0.629502 3:+100150408 MsaT016634.1:CDS
TGATGAGCAACAAGAAACAA+AGG 0.632540 3:+100150769 MsaT016634.1:CDS
GACACTGCAGCATTAGCTGG+TGG 0.647453 3:-100150467 None:intergenic
ACAAAGGTTACTGCTAATCA+CGG 0.653532 3:+100150785 MsaT016634.1:CDS
TCGGCCACTTAACGACTCAA+CGG 0.656433 3:+100150427 MsaT016634.1:CDS
TTGAAATTACAACATCTACA+AGG 0.662744 3:+100150746 MsaT016634.1:CDS
ACGACGGAAGACCAATGGAA+AGG 0.664616 3:-100150697 None:intergenic
CACTCACTAACTTAAAACTG+TGG 0.676618 3:-100150562 None:intergenic
ATTGTAGGCTTGCTAAGATG+TGG 0.705206 3:+100149583 MsaT016634.1:intron
ATTAGCTGGTGGAATTATGG+TGG 0.707309 3:-100150456 None:intergenic
CAGTAGCGGAGTTAGCTCCG+AGG 0.717483 3:+100150646 MsaT016634.1:CDS
TTAACTTGAGGATGTGACGA+CGG 0.726282 3:-100150713 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr3 gene 100149332 100150940 100149332 ID=MsaG016634
Chr3 mRNA 100149332 100150940 100149332 ID=MsaT016634.1;Parent=MsaG016634
Chr3 exon 100149332 100149464 100149332 ID=MsaT016634.1.exon1;Parent=MsaT016634.1
Chr3 CDS 100149332 100149464 100149332 ID=cds.MsaT016634.1;Parent=MsaT016634.1
Chr3 exon 100149590 100149719 100149590 ID=MsaT016634.1.exon2;Parent=MsaT016634.1
Chr3 CDS 100149590 100149719 100149590 ID=cds.MsaT016634.1;Parent=MsaT016634.1
Chr3 exon 100150313 100150940 100150313 ID=MsaT016634.1.exon3;Parent=MsaT016634.1
Chr3 CDS 100150313 100150940 100150313 ID=cds.MsaT016634.1;Parent=MsaT016634.1
Gene Sequence

>MsaT016634.1

ATGGGCAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGTGCTTGGACAAAAGAAGAAGATGAACGTCTCATTAACTACATCAAGCTTCATGGAGAAGGTTGTTGGAGGTCTCTTCCAAAAGCTGCTGGCTTGCTAAGATGTGGCAAGAGTTGCAGATTGAGATGGATAAATTATCTAAGACCTGATCTCAAGAGAGGAAACTTCACTGAACAAGAAGATGATCTTATCATTAACCTCCACAGCTTACTTGGAAACAAATGGTCGTTAATAGCTGCTAGATTACCAGGAAGAACAGATAATGAGATCAAGAATTACTGGAACACTCACATCAAGCGAAAACTCTACAGCCGTGGAGTCGACCCTCAAACTCATCGGCCACTTAACGACTCAACGGCATCCACCACCATAATTCCACCAGCTAATGCTGCAGTGTCAATATCTCAAATTCCCACAAGCAACGTTAAGAACATGATCATCAAAGATATTAGCATTATTAACAACAACGACCACAGTTTTAAGTTAGTGAGTGGCTATGCCAATACAAAGATTAATGGAACCAAGTTGGTATGTGAAGATTCAAATTCAAATAACAGTAGCGGAGTTAGCTCCGAGGAAGCATGTCATCATCAACTAAATTTGGACCTTTCCATTGGTCTTCCGTCGTCACATCCTCAAGTTAACGATGAAAAATTGAAATTACAACATCTACAAGGTGATGAGCAACAAGAAACAAAGGTTACTGCTAATCACGGTCTGTGTCTTTGTTATGATCTAGGGTTTCAAAGCAACCAAGTGTGTTACTGCAACAAAGCCATAGGTAACACTGTTGCTACAAATGTCACCGATAATAATATGTATAGATTTTACAGACCCATGAATATTTAA
Protein sequence

>MsaT016634.1

MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGVDPQTHRPLNDSTASTTIIPPANAAVSISQIPTSNVKNMIIKDISIINNNDHSFKLVSGYANTKINGTKLVCEDSNSNNSSGVSSEEACHHQLNLDLSIGLPSSHPQVNDEKLKLQHLQGDEQQETKVTANHGLCLCYDLGFQSNQVCYCNKAIGNTVATNVTDNNMYRFYRPMNI*