AlfalfaGEDB | MsaG017173

M. sativa ssp. caerulea / MsaG017173

KEGG: -
GO: GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009593 GO:0009628 GO:0009719 GO:0009720 GO:0009722 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009735 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032870 GO:0034097 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071345 GO:0071369 GO:0071495 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03790.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017173	KEH35909.1	96.394	416	3	2	1	416	1	404	0.0	828

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017173	sp\|O04136\|KNAP3_MALDO	70.833	432	72	13	1	383	1	427	0.0	528

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017173	tr\|A0A072V1N7\|A0A072V1N7_MEDTR	96.394	416	3	2	1	416	1	404	0.0	828

TFs/TRs:

Gene ID	Type	Classification
MsaG017173	TF	HB-KNOX

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000157	MsaG017173	0.811257	1.313884e-50	2.313664e-48
MsaG000273	MsaG017173	0.823742	2.079151e-53	5.054020e-51
MsaG000288	MsaG017173	0.808614	4.839400e-50	7.992558e-48
MsaG000646	MsaG017173	0.814421	2.684432e-51	5.114199e-49
MsaG000855	MsaG017173	0.836028	2.172569e-56	7.504881e-54
MsaG001191	MsaG017173	0.826732	4.112124e-54	1.085301e-51
MsaG001237	MsaG017173	0.803936	4.631690e-49	6.850725e-47
MsaG001479	MsaG017173	0.825829	6.730408e-54	1.732292e-51
MsaG001672	MsaG017173	0.801304	1.606980e-48	2.237628e-46
MsaG002013	MsaG017173	0.808160	6.042874e-50	9.871789e-48
MsaG002015	MsaG017173	0.809921	2.545933e-50	4.339454e-48
MsaG002218	MsaG017173	0.830305	5.691462e-55	1.661588e-52
MsaG002292	MsaG017173	0.823196	2.785023e-53	6.670311e-51
MsaG003210	MsaG017173	0.835221	3.470729e-56	1.170220e-53
MsaG003315	MsaG017173	0.815692	1.405934e-51	2.765903e-49
MsaG003575	MsaG017173	0.856632	5.482756e-62	3.758686e-59
MsaG003754	MsaG017173	0.801313	1.600055e-48	2.228459e-46
MsaG003946	MsaG017173	0.810156	2.267493e-50	3.886904e-48
MsaG004181	MsaG017173	0.802282	1.014578e-48	1.444528e-46
MsaG004373	MsaG017173	0.845448	7.572672e-59	3.521633e-56
MsaG004594	MsaG017173	0.804346	3.808861e-49	5.687625e-47
MsaG004555	MsaG017173	0.802529	9.025512e-49	1.292368e-46
MsaG004858	MsaG017173	0.831995	2.197738e-55	6.737876e-53
MsaG005000	MsaG017173	0.840082	1.990251e-57	7.789468e-55
MsaG005401	MsaG017173	0.825768	6.957393e-54	1.787667e-51
MsaG005435	MsaG017173	0.803591	5.456215e-49	8.006152e-47
MsaG005438	MsaG017173	0.804599	3.374661e-49	5.068742e-47
MsaG005506	MsaG017173	0.826708	4.166455e-54	1.098926e-51
MsaG005508	MsaG017173	0.837349	1.004383e-56	3.610835e-54
MsaG005680	MsaG017173	0.872566	5.912348e-67	7.644256e-64
MsaG005683	MsaG017173	0.879819	1.925153e-69	3.445633e-66
MsaG005642	MsaG017173	0.842091	5.937721e-58	2.476406e-55
MsaG005705	MsaG017173	0.802716	8.262454e-49	1.188142e-46
MsaG005811	MsaG017173	0.813825	3.629376e-51	6.811847e-49
MsaG005864	MsaG017173	0.823605	2.237492e-53	5.418860e-51
MsaG006023	MsaG017173	0.859564	7.433458e-63	5.684293e-60
MsaG005958	MsaG017173	0.811863	9.717631e-51	1.736850e-48
MsaG006051	MsaG017173	0.853320	4.966035e-61	3.021761e-58
MsaG006084	MsaG017173	0.852639	7.759966e-61	4.609865e-58
MsaG006175	MsaG017173	0.860898	2.950972e-63	2.374097e-60
MsaG006203	MsaG017173	0.820738	1.026704e-52	2.302541e-50
MsaG006561	MsaG017173	0.859245	9.260744e-63	6.997153e-60
MsaG006604	MsaG017173	0.822510	4.016565e-53	9.443170e-51
MsaG006656	MsaG017173	0.820901	9.423105e-53	2.122499e-50
MsaG006902	MsaG017173	0.823741	2.079895e-53	5.055748e-51
MsaG007145	MsaG017173	0.860935	2.876105e-63	2.317036e-60
MsaG007328	MsaG017173	0.860879	2.990900e-63	2.404537e-60
MsaG007411	MsaG017173	0.835644	2.716228e-56	9.275380e-54
MsaG007555	MsaG017173	0.825832	6.721060e-54	1.730017e-51
MsaG007716	MsaG017173	0.866202	6.797507e-65	6.739538e-62
MsaG007729	MsaG017173	0.835118	3.683915e-56	1.238320e-53
MsaG007744	MsaG017173	0.841984	6.336664e-58	2.633845e-55
MsaG007833	MsaG017173	0.826482	4.714366e-54	1.235666e-51
MsaG008140	MsaG017173	0.821173	8.164860e-53	1.852396e-50
MsaG008461	MsaG017173	0.802050	1.131828e-48	1.602939e-46
MsaG008433	MsaG017173	0.828964	1.202186e-54	3.377565e-52
MsaG008552	MsaG017173	0.811406	1.219738e-50	2.155773e-48
MsaG009081	MsaG017173	0.839004	3.783527e-57	1.431718e-54
MsaG010066	MsaG017173	0.867777	2.150147e-65	2.272756e-62
MsaG010517	MsaG017173	0.841943	6.495841e-58	2.696467e-55
MsaG010533	MsaG017173	0.820823	9.820044e-53	2.207249e-50
MsaG010712	MsaG017173	0.820139	1.406861e-52	3.105748e-50
MsaG010835	MsaG017173	0.801180	1.703191e-48	2.364969e-46
MsaG010868	MsaG017173	0.830775	4.373740e-55	1.294166e-52
MsaG010894	MsaG017173	0.802156	1.076649e-48	1.528469e-46
MsaG010900	MsaG017173	0.834856	4.285527e-56	1.429318e-53
MsaG011287	MsaG017173	0.850149	3.894671e-60	2.121436e-57
MsaG011441	MsaG017173	0.860350	4.318821e-63	3.403683e-60
MsaG011558	MsaG017173	0.849324	6.605217e-60	3.498328e-57
MsaG011599	MsaG017173	0.829642	8.243258e-55	2.361402e-52
MsaG011806	MsaG017173	0.809055	3.898149e-50	6.507088e-48
MsaG011974	MsaG017173	0.821419	7.167202e-53	1.636623e-50
MsaG012120	MsaG017173	0.853049	5.932403e-61	3.575538e-58
MsaG012186	MsaG017173	0.815689	1.408742e-51	2.771122e-49
MsaG012304	MsaG017173	0.833749	8.097857e-56	2.613250e-53
MsaG012379	MsaG017173	0.804589	3.390533e-49	5.091417e-47
MsaG012418	MsaG017173	0.878991	3.770567e-69	6.496013e-66
MsaG013371	MsaG017173	0.803224	6.495286e-49	9.450370e-47
MsaG013644	MsaG017173	0.807269	9.322704e-50	1.490760e-47
MsaG013845	MsaG017173	0.830560	4.934817e-55	1.451158e-52
MsaG014110	MsaG017173	0.808360	5.480562e-50	8.996138e-48
MsaG014184	MsaG017173	0.805893	1.814084e-49	2.808114e-47
MsaG015082	MsaG017173	0.806567	1.309811e-49	2.060175e-47
MsaG015404	MsaG017173	0.808490	5.141882e-50	8.466980e-48
MsaG015496	MsaG017173	0.824425	1.439517e-53	3.564701e-51
MsaG015978	MsaG017173	0.871288	1.565036e-66	1.915350e-63
MsaG016685	MsaG017173	0.834686	4.725231e-56	1.568071e-53
MsaG016839	MsaG017173	0.816428	9.647914e-52	1.933816e-49
MsaG017058	MsaG017173	0.881528	4.729520e-70	9.167683e-67
MsaG017173	MsaG017209	0.823228	2.738601e-53	6.564704e-51
MsaG017173	MsaG017436	0.838388	5.448221e-57	2.022196e-54
MsaG017173	MsaG017505	0.830927	4.015456e-55	1.193346e-52
MsaG017173	MsaG017820	0.837109	1.156144e-56	4.126252e-54
MsaG017173	MsaG017883	0.831142	3.557996e-55	1.063963e-52
MsaG017173	MsaG017896	0.855247	1.386548e-61	9.038005e-59
MsaG017173	MsaG017966	0.838035	6.708625e-57	2.463086e-54
MsaG017173	MsaG017976	0.822665	3.698980e-53	8.732899e-51
MsaG017173	MsaG018111	0.808699	4.641312e-50	7.681611e-48
MsaG017173	MsaG018202	0.822915	3.236400e-53	7.692724e-51
MsaG017173	MsaG018218	0.896454	8.219087e-76	3.430709e-72
MsaG017173	MsaG018248	0.853729	3.794985e-61	2.342961e-58
MsaG017173	MsaG018257	0.823662	2.169924e-53	5.263379e-51
MsaG017173	MsaG018307	0.802119	1.095244e-48	1.553565e-46
MsaG017173	MsaG018593	0.800494	2.347440e-48	3.209462e-46
MsaG017173	MsaG018741	0.835524	2.910971e-56	9.905206e-54
MsaG017173	MsaG018773	0.863998	3.319142e-64	3.012923e-61
MsaG017173	MsaG018791	0.902800	1.559220e-78	9.409728e-75
MsaG017173	MsaG018834	0.880499	1.103355e-69	2.038719e-66
MsaG017173	MsaG019095	0.805774	1.920630e-49	2.964721e-47
MsaG017173	MsaG019382	0.818557	3.213991e-52	6.805478e-50
MsaG017173	MsaG019410	0.815738	1.373350e-51	2.704867e-49
MsaG017173	MsaG019692	0.811157	1.380548e-50	2.425156e-48
MsaG017173	MsaG019727	0.836118	2.062439e-56	7.144066e-54
MsaG017173	MsaG019731	0.826995	3.561687e-54	9.469004e-52
MsaG017173	MsaG019911	0.817174	6.574488e-52	1.343399e-49
MsaG017173	MsaG019925	0.885321	1.939300e-71	4.512699e-68
MsaG017173	MsaG019982	0.815561	1.503662e-51	2.948222e-49
MsaG017173	MsaG020580	0.882789	1.655707e-70	3.408222e-67
MsaG017173	MsaG020843	0.805150	2.592044e-49	3.943470e-47
MsaG017173	MsaG020874	0.835345	3.230328e-56	1.093252e-53
MsaG017173	MsaG020875	0.846206	4.725651e-59	2.253546e-56
MsaG017173	MsaG020983	0.806203	1.562095e-49	2.435940e-47
MsaG017173	MsaG020984	0.821616	6.458042e-53	1.482438e-50
MsaG017173	MsaG021043	0.861884	1.481341e-63	1.237631e-60
MsaG017173	MsaG021448	0.885385	1.835976e-71	4.284795e-68
MsaG017173	MsaG021576	0.813853	3.578235e-51	6.720561e-49
MsaG017173	MsaG021668	0.826109	5.779532e-54	1.499182e-51
MsaG017173	MsaG021863	0.828965	1.201588e-54	3.375994e-52
MsaG017173	MsaG022058	0.800878	1.962389e-48	2.706322e-46
MsaG017173	MsaG022059	0.813520	4.232757e-51	7.883790e-49
MsaG017173	MsaG023326	0.803462	5.802524e-49	8.488805e-47
MsaG017173	MsaG023743	0.828156	1.879898e-54	5.163422e-52
MsaG017173	MsaG023719	0.855704	1.022213e-61	6.773716e-59
MsaG017173	MsaG023765	0.824439	1.428653e-53	3.539166e-51
MsaG017173	MsaG025467	0.826378	4.989835e-54	1.304048e-51
MsaG017173	MsaG025691	0.814065	3.214686e-51	6.069763e-49
MsaG017173	MsaG026721	0.818885	2.710536e-52	5.788818e-50
MsaG017173	MsaG026714	0.801881	1.225510e-48	1.729013e-46
MsaG017173	MsaG026777	0.893117	1.887594e-74	6.563505e-71
MsaG017173	MsaG026860	0.866596	5.103833e-65	5.141627e-62
MsaG017173	MsaG026970	0.834397	5.580306e-56	1.835879e-53
MsaG017173	MsaG027361	0.845480	7.424480e-59	3.456107e-56
MsaG017173	MsaG027491	0.827641	2.498193e-54	6.763099e-52
MsaG017173	MsaG027593	0.801104	1.765215e-48	2.446836e-46
MsaG017173	MsaG027716	0.803025	7.138841e-49	1.033895e-46
MsaG017173	MsaG027800	0.825298	8.980254e-54	2.277546e-51
MsaG017173	MsaG028001	0.903209	1.026103e-78	6.348390e-75
MsaG017173	MsaG028037	0.813964	3.382880e-51	6.371342e-49
MsaG017173	MsaG028034	0.827170	3.234687e-54	8.642025e-52
MsaG017173	MsaG028234	0.815006	1.994471e-51	3.856150e-49
MsaG017173	MsaG028257	0.809379	3.324805e-50	5.593220e-48
MsaG017173	MsaG028374	0.800385	2.470860e-48	3.369943e-46
MsaG017173	MsaG028351	0.808798	4.421348e-50	7.334789e-48
MsaG017173	MsaG028442	0.830747	4.442156e-55	1.313333e-52
MsaG017173	MsaG028444	0.840636	1.428511e-57	5.688903e-55
MsaG017173	MsaG028456	0.808589	4.898581e-50	8.085590e-48
MsaG017173	MsaG028457	0.815024	1.976231e-51	3.822573e-49
MsaG017173	MsaG028498	0.830018	6.684292e-55	1.935498e-52
MsaG017173	MsaG028554	0.824798	1.177004e-53	2.944406e-51
MsaG017173	MsaG028715	0.882374	2.342326e-70	4.725669e-67
MsaG017173	MsaG028716	0.849512	5.859241e-60	3.123498e-57
MsaG017173	MsaG028811	0.805067	2.697802e-49	4.096424e-47
MsaG017173	MsaG028929	0.805687	2.003216e-49	3.085927e-47
MsaG017173	MsaG029086	0.827546	2.631551e-54	7.105322e-52
MsaG017173	MsaG029281	0.815442	1.597595e-51	3.123018e-49
MsaG017173	MsaG029385	0.830270	5.806643e-55	1.693480e-52
MsaG017173	MsaG029320	0.802412	9.540651e-49	1.362466e-46
MsaG017173	MsaG029324	0.879803	1.949356e-69	3.486442e-66
MsaG017173	MsaG029484	0.812098	8.641459e-51	1.553378e-48
MsaG017173	MsaG029540	0.878620	5.085892e-69	8.612388e-66
MsaG017173	MsaG029519	0.802662	8.476213e-49	1.217414e-46
MsaG017173	MsaG029951	0.819202	2.297935e-52	4.948878e-50
MsaG017173	MsaG030471	0.831288	3.276857e-55	9.840215e-53
MsaG017173	MsaG030501	0.815124	1.878606e-51	3.642718e-49
MsaG017173	MsaG030507	0.812304	7.793585e-51	1.408174e-48
MsaG017173	MsaG032146	0.823652	2.181355e-53	5.289682e-51
MsaG017173	MsaG032285	0.870202	3.547957e-66	4.146286e-63
MsaG017173	MsaG032386	0.825225	9.343463e-54	2.364905e-51
MsaG017173	MsaG033249	0.809411	3.273800e-50	5.511758e-48
MsaG017173	MsaG033333	0.816118	1.131309e-51	2.249729e-49
MsaG017173	MsaG033481	0.812131	8.498859e-51	1.529008e-48
MsaG017173	MsaG033693	0.832908	1.309282e-55	4.121940e-53
MsaG017173	MsaG033812	0.814219	2.972851e-51	5.635085e-49
MsaG017173	MsaG033853	0.855930	8.785887e-62	5.870046e-59
MsaG017173	MsaG034044	0.839338	3.101261e-57	1.185665e-54
MsaG017173	MsaG034072	0.824603	1.308035e-53	3.254786e-51
MsaG017173	MsaG034172	0.841686	7.590294e-58	3.124890e-55
MsaG017173	MsaG034253	0.803648	5.310340e-49	7.802329e-47
MsaG017173	MsaG034259	0.846078	5.117625e-59	2.430114e-56
MsaG017173	MsaG034337	0.830663	4.657462e-55	1.373632e-52
MsaG017173	MsaG034827	0.824306	1.535309e-53	3.789648e-51
MsaG017173	MsaG034829	0.824259	1.574711e-53	3.881793e-51
MsaG017173	MsaG034842	0.800321	2.544949e-48	3.465928e-46
MsaG017173	MsaG035057	0.808588	4.900988e-50	8.089340e-48
MsaG017173	MsaG036109	0.825821	6.758526e-54	1.739151e-51
MsaG017173	MsaG036332	0.810349	2.060820e-50	3.549491e-48
MsaG017173	MsaG037861	0.820892	9.469712e-53	2.132462e-50
MsaG017173	MsaG037865	0.833091	1.179480e-55	3.733412e-53
MsaG017173	MsaG037866	0.834213	6.204781e-56	2.029954e-53
MsaG017173	MsaG037867	0.828536	1.523895e-54	4.230585e-52
MsaG017173	MsaG038016	0.886414	7.561416e-72	1.856864e-68
MsaG017173	MsaG038395	0.810266	2.147132e-50	3.690544e-48
MsaG017173	MsaG039196	0.808066	6.325549e-50	1.031023e-47
MsaG017173	MsaG039621	0.840846	1.258949e-57	5.046795e-55
MsaG017173	MsaG039751	0.808921	4.164308e-50	6.928814e-48
MsaG017173	MsaG040072	0.848272	1.289385e-59	6.589015e-57
MsaG017173	MsaG040612	0.814110	3.142770e-51	5.940612e-49
MsaG017173	MsaG040704	0.850013	4.252376e-60	2.305581e-57
MsaG017173	MsaG041116	0.807959	6.665423e-50	1.083624e-47
MsaG017173	MsaG041211	0.811905	9.515327e-51	1.702459e-48
MsaG017173	MsaG041271	0.812842	5.951200e-51	1.089791e-48
MsaG017173	MsaG041734	0.854508	2.266789e-61	1.438986e-58
MsaG017173	MsaG041899	0.829443	9.209916e-55	2.623263e-52
MsaG017173	MsaG041900	0.825660	7.380347e-54	1.890555e-51
MsaG017173	MsaG041901	0.834999	3.945204e-56	1.321500e-53
MsaG017173	MsaG041902	0.821635	6.393797e-53	1.468438e-50
MsaG017173	MsaG041905	0.820791	9.987609e-53	2.243033e-50
MsaG017173	MsaG043415	0.821115	8.416931e-53	1.906620e-50
MsaG017173	MsaG043668	0.809944	2.517659e-50	4.293533e-48
MsaG017173	MsaG044063	0.826663	4.270248e-54	1.124860e-51
MsaG017173	MsaG044336	0.851563	1.564159e-60	8.946805e-58
MsaG017173	MsaG044384	0.825935	6.354592e-54	1.640450e-51
MsaG017173	MsaG044439	0.844392	1.455509e-58	6.537100e-56
MsaG017173	MsaG044663	0.823402	2.494689e-53	6.008315e-51
MsaG017173	MsaG044888	0.815975	1.217077e-51	2.411571e-49
MsaG017173	MsaG045021	0.812201	8.205877e-51	1.478870e-48
MsaG017173	MsaG045222	0.829049	1.147066e-54	3.230594e-52
MsaG017173	MsaG045301	0.832847	1.354821e-55	4.257541e-53
MsaG017173	MsaG045445	0.835399	3.130343e-56	1.061130e-53
MsaG017173	MsaG045452	0.883826	6.919094e-71	1.497083e-67
MsaG017173	MsaG045487	0.801624	1.383017e-48	1.939802e-46
MsaG017173	MsaG045677	0.816387	9.852324e-52	1.972781e-49
MsaG017173	MsaG045838	0.821573	6.608676e-53	1.515226e-50
MsaG017173	MsaG045863	0.819603	1.863513e-52	4.055457e-50
MsaG017173	MsaG046001	0.820885	9.502158e-53	2.139381e-50
MsaG017173	MsaG046029	0.882400	2.290494e-70	4.626686e-67
MsaG017173	MsaG046053	0.804059	4.367003e-49	6.478048e-47
MsaG017173	MsaG046251	0.816303	1.028753e-51	2.055521e-49
MsaG017173	MsaG046383	0.839266	3.238354e-57	1.235397e-54
MsaG017173	MsaG046539	0.897725	2.421412e-76	1.086653e-72
MsaG017173	MsaG046512	0.856111	7.779491e-62	5.232833e-59
MsaG017173	MsaG046556	0.822207	4.718691e-53	1.100384e-50
MsaG017173	MsaG046588	0.820510	1.157681e-52	2.580789e-50
MsaG017173	MsaG046632	0.804203	4.078009e-49	6.069349e-47
MsaG017173	MsaG046770	0.858404	1.647264e-62	1.205881e-59
MsaG017173	MsaG046945	0.815709	1.394209e-51	2.743935e-49
MsaG017173	MsaG047054	0.804427	3.664930e-49	5.482847e-47
MsaG017173	MsaG001257	0.838867	4.103067e-57	1.546025e-54
MsaG017173	MsaG002331	0.854559	2.191259e-61	1.393545e-58
MsaG017173	MsaG004907	0.893436	1.404756e-74	4.970394e-71
MsaG017173	MsaG002456	0.823818	1.995887e-53	4.861635e-51
MsaG017173	MsaG001485	0.822100	4.995604e-53	1.161605e-50
MsaG017173	MsaG000067	0.814103	3.152939e-51	5.958960e-49
MsaG017173	MsaG003009	0.822596	3.837523e-53	9.043150e-51
MsaG017173	MsaG001106	0.836598	1.558812e-56	5.477843e-54
MsaG017173	MsaG003742	0.817557	5.395084e-52	1.113318e-49
MsaG017173	MsaG001844	0.821073	8.605939e-53	1.947286e-50
MsaG017173	MsaG004535	0.822280	4.539482e-53	1.060668e-50
MsaG017173	MsaG008796	0.810475	1.936119e-50	3.344965e-48
MsaG017173	MsaG009037	0.802275	1.017776e-48	1.448868e-46
MsaG017173	MsaG009542	0.858831	1.230586e-62	9.152675e-60
MsaG017173	MsaG014180	0.855373	1.275141e-61	8.349606e-59
MsaG017173	MsaG011676	0.810775	1.668721e-50	2.904101e-48
MsaG017173	MsaG012695	0.816493	9.330764e-52	1.873422e-49
MsaG017173	MsaG019142	0.863517	4.676977e-64	4.165901e-61
MsaG017173	MsaG019914	0.804264	3.960506e-49	5.902898e-47
MsaG017173	MsaG022111	0.891502	8.288180e-74	2.642500e-70
MsaG017173	MsaG021114	0.823387	2.515256e-53	6.055439e-51
MsaG017173	MsaG019652	0.812718	6.332942e-51	1.156111e-48
MsaG017173	MsaG027636	0.807920	6.791128e-50	1.103090e-47
MsaG017173	MsaG028858	0.816169	1.101936e-51	2.194234e-49
MsaG017173	MsaG028139	0.814733	2.291515e-51	4.399854e-49
MsaG017173	MsaG032410	0.825557	7.801054e-54	1.992725e-51
MsaG017173	MsaG030315	0.812261	7.963153e-51	1.437264e-48
MsaG017173	MsaG030863	0.822812	3.420195e-53	8.106994e-51
MsaG017173	MsaG032384	0.803056	7.035882e-49	1.019703e-46
MsaG017173	MsaG032243	0.835389	3.148140e-56	1.066861e-53
MsaG017173	MsaG031968	0.818262	3.746820e-52	7.873357e-50
MsaG017173	MsaG031338	0.860052	5.307373e-63	4.134747e-60
MsaG017173	MsaG034730	0.837296	1.036405e-56	3.719822e-54
MsaG017173	MsaG033321	0.908265	4.946077e-81	4.178915e-77
MsaG017173	MsaG033325	0.815720	1.386019e-51	2.728616e-49
MsaG017173	MsaG032876	0.807268	9.327047e-50	1.491415e-47
MsaG017173	MsaG033454	0.816371	9.934322e-52	1.988408e-49
MsaG017173	MsaG040848	0.832566	1.589678e-55	4.954867e-53
MsaG017173	MsaG036053	0.829382	9.531059e-55	2.709848e-52
MsaG017173	MsaG036751	0.815022	1.978849e-51	3.827349e-49
MsaG017173	MsaG035247	0.806617	1.278624e-49	2.013510e-47
MsaG017173	MsaG036073	0.847188	2.554728e-59	1.258921e-56
MsaG017173	MsaG035340	0.841062	1.105941e-57	4.464050e-55
MsaG017173	MsaG036985	0.845911	5.680856e-59	2.682567e-56
MsaG017173	MsaG039226	0.824819	1.164075e-53	2.913741e-51
MsaG017173	MsaG039736	0.831112	3.619601e-55	1.081440e-52
MsaG017173	MsaG035272	0.807514	8.275695e-50	1.331161e-47
MsaG017173	MsaG043490	0.828005	2.044143e-54	5.590647e-52
MsaG017173	MsaG045876	0.824443	1.425704e-53	3.532266e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017173	MtrunA17_Chr3g0137241	96.084	383	3	2	1	383	1	371	0.0	758
MsaG017173	MtrunA17_Chr1g0149651	66.970	439	86	8	1	383	1	436	0.0	557
MsaG017173	MtrunA17_Chr2g0305101	66.006	353	79	6	31	382	42	354	7.66e-159	452
MsaG017173	MtrunA17_Chr4g0065241	80.709	254	41	3	119	370	71	318	1.68e-148	425
MsaG017173	MtrunA17_Chr5g0398181	67.033	273	78	3	119	385	28	294	1.23e-128	373
MsaG017173	MtrunA17_Chr1g0192791	35.249	261	122	8	119	367	20	245	9.16e-31	119
MsaG017173	MtrunA17_Chr2g0289201	28.102	274	166	4	119	391	118	361	1.01e-28	115
MsaG017173	MtrunA17_Chr1g0151961	32.669	251	139	7	119	367	120	342	1.41e-25	107
MsaG017173	MtrunA17_Chr5g0413201	32.669	251	138	6	119	367	73	294	2.04e-25	105
MsaG017173	MtrunA17_Chr5g0439391	29.032	279	152	7	119	391	47	285	2.45e-24	102

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017173	AT5G25220.2	64.989	437	81	12	1	383	1	419	9.29e-180	508
MsaG017173	AT5G25220.1	64.908	436	81	12	1	382	1	418	5.68e-179	506
MsaG017173	AT5G11060.1	67.233	412	75	12	1	382	1	382	7.46e-173	489
MsaG017173	AT4G32040.2	62.895	380	126	8	6	383	13	379	2.13e-155	444
MsaG017173	AT4G32040.1	62.895	380	126	8	6	383	13	379	2.94e-155	444
MsaG017173	AT1G62990.1	62.759	290	99	4	96	382	7	290	2.14e-126	367
MsaG017173	AT1G70510.1	33.077	260	137	8	112	367	63	289	2.04e-29	117
MsaG017173	AT1G23380.1	32.616	279	143	9	119	389	86	327	9.57e-29	115
MsaG017173	AT1G70510.2	31.923	260	144	7	112	367	63	293	6.82e-28	112
MsaG017173	AT1G23380.2	32.384	281	143	10	119	389	86	329	6.74e-27	110
MsaG017173	AT4G08150.1	33.205	259	130	8	119	367	135	360	9.79e-26	108
MsaG017173	AT1G62360.1	34.400	250	135	6	119	367	122	343	3.16e-25	106

Find 124 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATAATAGTATGGGAGGATT+TGG	0.320582	3:+106513827	MsaT017173.1:CDS
TGCCAGCTGAGCGTCGATCC+TGG	0.345057	3:-106511478	None:intergenic
CGATGACTTCGCTGTGGTTT+CGG	0.353018	3:-106511278	None:intergenic
TGTACCTGTTAGACTTTGTA+AGG	0.355039	3:-106512454	None:intergenic
GTACTCTGCGTTAGGACAAC+AGG	0.363398	3:+106511524	MsaT017173.1:CDS
GGATGGTTCAGATAATAGTA+TGG	0.368115	3:+106513817	MsaT017173.1:CDS
CTTTCCAAACTGCACCTAAC+TGG	0.380352	3:+106511115	MsaT017173.1:CDS
AATTGAAACAGATCAATAAC+TGG	0.381851	3:+106514814	MsaT017173.1:CDS
GTTGTTGTTGTTCTGTGAAA+TGG	0.389827	3:-106511065	None:intergenic
TGCCTTTCAGGAAGAGGATA+AGG	0.392331	3:+106514764	MsaT017173.1:intron
CAGTCCTTACAAAGTCTAAC+AGG	0.396414	3:+106512450	MsaT017173.1:CDS
GAGCGTCGATCCTGGGCAAC+TGG	0.397329	3:-106511470	None:intergenic
TAAACAACTCGACCACTTCA+TGG	0.399427	3:+106511569	MsaT017173.1:CDS
GAGCCATTGACCGGAGGATT+GGG	0.403988	3:-106511238	None:intergenic
GCAAGGTTGGTGCAAGAAAC+CGG	0.410624	3:+106514786	MsaT017173.1:CDS
TGGTGTCGAGGTTGCGAAGA+AGG	0.418558	3:-106511149	None:intergenic
AGACGAGCTGGAAAACTTCC+TGG	0.420513	3:+106514206	MsaT017173.1:CDS
AGTGATGTTAATCTGTTTGA+TGG	0.421723	3:+106513788	MsaT017173.1:CDS
AGGGCGTTGTTGAGCCAGTT+AGG	0.423606	3:-106511129	None:intergenic
TGAGCCAGTTAGGTGCAGTT+TGG	0.424789	3:-106511119	None:intergenic
GGAAGCAGTAATGGCTTGTT+GGG	0.426655	3:+106512419	MsaT017173.1:CDS
GTTCCCAATCCTCCGGTCAA+TGG	0.427348	3:+106511235	MsaT017173.1:CDS
AATGGTGGAGTGGGTTGTCT+TGG	0.431285	3:-106511047	None:intergenic
TGGAAGCAGTAATGGCTTGT+TGG	0.435199	3:+106512418	MsaT017173.1:CDS
GAAACGCAAAGGTGAAATAA+TGG	0.435340	3:+106511380	MsaT017173.1:CDS
ATCCTGGGCAACTGGTCAAC+CGG	0.438877	3:-106511462	None:intergenic
TCAATCAAAGGAAGAGGAAC+TGG	0.439251	3:+106514841	MsaT017173.1:CDS
GAAGTTGGTACTGTTGTTGT+TGG	0.439599	3:-106511193	None:intergenic
GCCCAGGATCGACGCTCAGC+TGG	0.442737	3:+106511476	MsaT017173.1:CDS
TAATCTGTTTGATGGAGGTT+TGG	0.446200	3:+106513796	MsaT017173.1:CDS
AGAGCCATTGACCGGAGGAT+TGG	0.446472	3:-106511239	None:intergenic
GCCAGCTGAGCGTCGATCCT+GGG	0.452139	3:-106511477	None:intergenic
GGTACTGTTGTTGTTGGTTG+TGG	0.453246	3:-106511187	None:intergenic
ATTAAAGCATGAGTTGAAAC+AGG	0.455099	3:+106513904	MsaT017173.1:CDS
ATAGAAGCTGTTCATACAAC+GGG	0.456842	3:-106511407	None:intergenic
CTTCGCTGTGGTTTCGGTGG+AGG	0.457682	3:-106511272	None:intergenic
TTGTCCTAACGCAGAGTACT+TGG	0.459203	3:-106511520	None:intergenic
AACCGGCGGTGTCGAGGTTG+AGG	0.460908	3:-106511215	None:intergenic
CAGCGGAGGGAGTGATGAAC+TGG	0.464161	3:+106511349	MsaT017173.1:CDS
CGCCGGTTGACCAGTTGCCC+AGG	0.465203	3:+106511460	MsaT017173.1:CDS
CAACCTCAGTACTTAAAGAT+TGG	0.466078	3:+106514234	MsaT017173.1:CDS
TTCAACGCATTAGAAGTTGA+AGG	0.469895	3:-106514873	None:intergenic
GTTGTTGTTGGTTGTGGCGG+TGG	0.469972	3:-106511181	None:intergenic
CCATGCAATGGAAGCAGTAA+TGG	0.471444	3:+106512410	MsaT017173.1:CDS
GTTGCTCCTGTACCTTCCCC+TGG	0.471752	3:-106513734	None:intergenic
CTGTTTGATGGAGGTTTGGA+TGG	0.472583	3:+106513800	MsaT017173.1:CDS
CTGTGGTTTCGGTGGAGGAC+AGG	0.484561	3:-106511267	None:intergenic
CATGGACTCGGACATGTTGT+TGG	0.486135	3:-106512392	None:intergenic
AGAGTTCTTACAGTAGGATA+AGG	0.489180	3:-106514278	None:intergenic
CGTCACCGGCGCTGGTATGA+AGG	0.491895	3:+106511305	MsaT017173.1:CDS
GTTGCCAAGTACTCTGCGTT+AGG	0.491986	3:+106511516	MsaT017173.1:CDS
GTTTCACCAGGGGAAGGTAC+AGG	0.498577	3:+106513728	MsaT017173.1:CDS
AGTACTGAGGTTGTGTCACC+AGG	0.501554	3:-106514224	None:intergenic
CCATTACTGCTTCCATTGCA+TGG	0.504180	3:-106512410	None:intergenic
AGGACGGGAGAGCCATTGAC+CGG	0.509843	3:-106511247	None:intergenic
GTTCTGTGAAATGGTGGAGT+GGG	0.511127	3:-106511056	None:intergenic
AAGCGGTGAGGCAACAGCGG+AGG	0.511964	3:+106511335	MsaT017173.1:CDS
GCAAATTTAAGATTATGAAA+AGG	0.513629	3:-106514935	None:intergenic
GTTTCGGTGGAGGACAGGAC+GGG	0.513862	3:-106511262	None:intergenic
CTGCTTCCATTGCATGGACT+CGG	0.514678	3:-106512404	None:intergenic
TTGACCGGAGGATTGGGAAC+CGG	0.515320	3:-106511232	None:intergenic
TGTTGCCTCACCGCTTTCCT+CGG	0.515416	3:-106511328	None:intergenic
TCATTCTCTGTTAGAACAAG+AGG	0.524064	3:-106513851	None:intergenic
GGTGTCGAGGTTGCGAAGAA+GGG	0.525959	3:-106511148	None:intergenic
GAAAATTGTGGACATAAGAG+AGG	0.527462	3:+106514169	MsaT017173.1:CDS
GGTGTCGAGGTTGAGGAAGT+TGG	0.532035	3:-106511208	None:intergenic
ATTGGGAACCGGCGGTGTCG+AGG	0.533014	3:-106511221	None:intergenic
ACTTATCTCTAATTCAAGAT+CGG	0.536434	3:-106514970	None:intergenic
GATGGTTCAGATAATAGTAT+GGG	0.538925	3:+106513818	MsaT017173.1:CDS
CGTTGAAGAGCAAGCGCAAG+AGG	0.539470	3:+106514889	MsaT017173.1:CDS
CTCGGCCTTCATACCAGCGC+CGG	0.539817	3:-106511310	None:intergenic
GGTTTCGGTGGAGGACAGGA+CGG	0.540180	3:-106511263	None:intergenic
GGAAGAGGATAAGGCAAGGT+TGG	0.540633	3:+106514773	MsaT017173.1:intron
GTTGTTGTTCTGTGAAATGG+TGG	0.541053	3:-106511062	None:intergenic
GAGTGGTGAGGATCGGAGGT+TGG	0.542790	3:-106511093	None:intergenic
CCTCAGTACTTAAAGATTGG+TGG	0.548243	3:+106514237	MsaT017173.1:CDS
GAAAGAGTGGTGAGGATCGG+AGG	0.551627	3:-106511097	None:intergenic
ATCGACGACGTCACCGGCGC+TGG	0.555704	3:+106511297	MsaT017173.1:CDS
AGCGGTGAGGCAACAGCGGA+GGG	0.559972	3:+106511336	MsaT017173.1:CDS
CGGCGCTGGTATGAAGGCCG+AGG	0.563738	3:+106511311	MsaT017173.1:CDS
AGAGAATGAGAGGTCCCTCA+TGG	0.567340	3:+106513865	MsaT017173.1:CDS
ATAACTGGTTTATCAATCAA+AGG	0.567448	3:+106514829	MsaT017173.1:CDS
TGTTCTGTGAAATGGTGGAG+TGG	0.567991	3:-106511057	None:intergenic
CAAGGTTGGTGCAAGAAACC+GGG	0.570646	3:+106514787	MsaT017173.1:CDS
ACCGCCGGTTCCCAATCCTC+CGG	0.570735	3:+106511228	MsaT017173.1:CDS
GAATTAGAGATAAGTAATGC+AGG	0.571655	3:+106514978	MsaT017173.1:CDS
GAAGTCATCGACGACGTCAC+CGG	0.571705	3:+106511291	MsaT017173.1:CDS
TTCCTCAACCTCGACACCGC+CGG	0.572536	3:+106511213	MsaT017173.1:CDS
TGACTTCGCTGTGGTTTCGG+TGG	0.576108	3:-106511275	None:intergenic
GGTTTATCAATCAAAGGAAG+AGG	0.579093	3:+106514835	MsaT017173.1:CDS
TTGGAAAGAGTGGTGAGGAT+CGG	0.583594	3:-106511100	None:intergenic
CCACCAATCTTTAAGTACTG+AGG	0.588799	3:-106514237	None:intergenic
AAAGGTAAAATACCATGAAG+TGG	0.598924	3:-106511581	None:intergenic
TAGGTGCAGTTTGGAAAGAG+TGG	0.600373	3:-106511110	None:intergenic
TGGCGTTGACGTTGGTGTCG+AGG	0.601937	3:-106511161	None:intergenic
GGGTTATAAAGAGAAAATTG+TGG	0.610746	3:+106514157	MsaT017173.1:intron
TTGTTCTAACAGAGAATGAG+AGG	0.611125	3:+106513855	MsaT017173.1:CDS
TGTGGCGGTGGCGTTGACGT+TGG	0.611369	3:-106511169	None:intergenic
GGTTCAGATAATAGTATGGG+AGG	0.618510	3:+106513821	MsaT017173.1:CDS
GATGTTAATCTGTTTGATGG+AGG	0.621633	3:+106513791	MsaT017173.1:CDS
TGTGTAACAGGAGTTTCACC+AGG	0.621894	3:+106513716	MsaT017173.1:intron
TGGCAGAAAGCGAAACGCAA+AGG	0.622833	3:+106511369	MsaT017173.1:CDS
GATCTGTTTCAATTGCAACC+CGG	0.623157	3:-106514805	None:intergenic
ACCGGAGGATTGGGAACCGG+CGG	0.625286	3:-106511229	None:intergenic
GGAAAGCGGTGAGGCAACAG+CGG	0.626255	3:+106511332	MsaT017173.1:CDS
GGGCAACTGGTCAACCGGCG+TGG	0.628223	3:-106511457	None:intergenic
ATGTCTTACACGTTCCATGA+GGG	0.635061	3:-106513879	None:intergenic
ACAGGAGTTTCACCAGGGGA+AGG	0.636992	3:+106513722	MsaT017173.1:intron
ACATGTCCGAGTCCATGCAA+TGG	0.642083	3:+106512398	MsaT017173.1:CDS
ACTGTTGTTGTTGGTTGTGG+CGG	0.642777	3:-106511184	None:intergenic
CATGTCTTACACGTTCCATG+AGG	0.645094	3:-106513880	None:intergenic
GATAGAAGCTGTTCATACAA+CGG	0.647941	3:-106511408	None:intergenic
TACTCTGCGTTAGGACAACA+GGG	0.650241	3:+106511525	MsaT017173.1:CDS
GGTATGAAGGCCGAGGAAAG+CGG	0.652275	3:+106511318	MsaT017173.1:CDS
ACGGGAGAGCCATTGACCGG+AGG	0.652694	3:-106511244	None:intergenic
GTGTTTGAGAATCGCCACGC+CGG	0.654940	3:+106511443	MsaT017173.1:CDS
TTCAGGAAGAGGATAAGGCA+AGG	0.655439	3:+106514769	MsaT017173.1:intron
AATGCAGGTGATAAAAGTGA+CGG	0.675503	3:+106514993	MsaT017173.1:CDS
GGTGGCAATCACATTCAAAG+TGG	0.680210	3:+106514255	MsaT017173.1:CDS
GCAGTTTGGAAAGAGTGGTG+AGG	0.695329	3:-106511105	None:intergenic
CGTCGTCGATGACTTCGCTG+TGG	0.697602	3:-106511284	None:intergenic
GTGTAACAGGAGTTTCACCA+GGG	0.706920	3:+106513717	MsaT017173.1:intron
GAAGGCCGAGGAAAGCGGTG+AGG	0.708487	3:+106511323	MsaT017173.1:CDS
TGTAACAGGAGTTTCACCAG+GGG	0.775474	3:+106513718	MsaT017173.1:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	106511033	106515028	106511033	ID=MsaG017173
Chr3	mRNA	106511033	106515028	106511033	ID=MsaT017173.1;Parent=MsaG017173
Chr3	exon	106511033	106511590	106511033	ID=MsaT017173.1.exon1;Parent=MsaT017173.1
Chr3	CDS	106511033	106511590	106511033	ID=cds.MsaT017173.1;Parent=MsaT017173.1
Chr3	exon	106512351	106512471	106512351	ID=MsaT017173.1.exon2;Parent=MsaT017173.1
Chr3	CDS	106512351	106512471	106512351	ID=cds.MsaT017173.1;Parent=MsaT017173.1
Chr3	exon	106513726	106513925	106513726	ID=MsaT017173.1.exon3;Parent=MsaT017173.1
Chr3	CDS	106513726	106513925	106513726	ID=cds.MsaT017173.1;Parent=MsaT017173.1
Chr3	exon	106514158	106514289	106514158	ID=MsaT017173.1.exon4;Parent=MsaT017173.1
Chr3	CDS	106514158	106514289	106514158	ID=cds.MsaT017173.1;Parent=MsaT017173.1
Chr3	exon	106514774	106515028	106514774	ID=MsaT017173.1.exon5;Parent=MsaT017173.1
Chr3	CDS	106514774	106515028	106514774	ID=cds.MsaT017173.1;Parent=MsaT017173.1

Gene Sequence

>MsaT017173.1

ATGGCGTATCACAACCAAGACAACCCACTCCACCATTTCACAGAACAACAACAACAACAACCAACCTCCGATCCTCACCACTCTTTCCAAACTGCACCTAACTGGCTCAACAACGCCCTTCTTCGCAACCTCGACACCAACGTCAACGCCACCGCCACAACCAACAACAACAGTACCAACTTCCTCAACCTCGACACCGCCGGTTCCCAATCCTCCGGTCAATGGCTCTCCCGTCCTGTCCTCCACCGAAACCACAGCGAAGTCATCGACGACGTCACCGGCGCTGGTATGAAGGCCGAGGAAAGCGGTGAGGCAACAGCGGAGGGAGTGATGAACTGGCAGAAAGCGAAACGCAAAGGTGAAATAATGGCGCACCCGTTGTATGAACAGCTTCTATCAGCACACGTGTCGTGTTTGAGAATCGCCACGCCGGTTGACCAGTTGCCCAGGATCGACGCTCAGCTGGCAGAGTCACAGAATGTTGTTGCCAAGTACTCTGCGTTAGGACAACAGGGCATGCTTGATAACGATGATAATAAACAACTCGACCACTTCATGTCGCATTATGTTTTGTTGCTTTGTTCGTTCAAAGAACAGCTCCAACAACATGTCCGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATCGAACAGTCCTTACAAAGTCTAACAGGAGTTTCACCAGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAGCAAGTAGACAGTGATGTTAATCTGTTTGATGGAGGTTTGGATGGTTCAGATAATAGTATGGGAGGATTTGGTCCTCTTGTTCTAACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCTGGAAAACTTCCTGGTGACACAACCTCAGTACTTAAAGATTGGTGGCAATCACATTCAAAGTGGCCTTATCCTACTGAAGAGGATAAGGCAAGGTTGGTGCAAGAAACCGGGTTGCAATTGAAACAGATCAATAACTGGTTTATCAATCAAAGGAAGAGGAACTGGCACAGCAATCCTTCAACTTCTAATGCGTTGAAGAGCAAGCGCAAGAGGTATTTCTATATTAAAAAAATAGTCCTTTTCATAATCTTAAATTTGCATGAACTCTGCACCGATCTTGAATTAGAGATAAGTAATGCAGGTGATAAAAGTGACGGTCGTTACATGTAA

Protein sequence

>MsaT017173.1

MAYHNQDNPLHHFTEQQQQQPTSDPHHSFQTAPNWLNNALLRNLDTNVNATATTNNNSTNFLNLDTAGSQSSGQWLSRPVLHRNHSEVIDDVTGAGMKAEESGEATAEGVMNWQKAKRKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNALKSKRKRYFYIKKIVLFIILNLHELCTDLELEISNAGDKSDGRYM*