AlfalfaGEDB | MsaG017541

M. sativa ssp. caerulea / MsaG017541

KEGG: -
GO: GO:0001558 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0030308 GO:0030544 GO:0031072 GO:0031090 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031965 GO:0031967 GO:0031975 GO:0034641 GO:0034645 GO:0040008 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045893 GO:0045926 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061649 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0140030 GO:0140035 GO:0140036 GO:1901360 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001141
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017541	XP_013462122.1	94.505	91	5	0	1	91	1	91	1.43e-58	184

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017541	sp\|F4JVB8\|RADL1_ARATH	59.770	87	33	1	7	91	14	100	1.40e-31	109

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017541	tr\|A0A072V2R8\|A0A072V2R8_MEDTR	94.505	91	5	0	1	91	1	91	6.85e-59	184

TFs/TRs:

Gene ID	Type	Classification
MsaG017541	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000202	MsaG017541	0.840686	1.386422e-57	5.529991e-55
MsaG000344	MsaG017541	0.833062	1.198734e-55	3.791066e-53
MsaG000350	MsaG017541	0.829795	7.570675e-55	2.178183e-52
MsaG000416	MsaG017541	0.839937	2.171122e-57	8.458900e-55
MsaG000488	MsaG017541	0.836536	1.616218e-56	5.669117e-54
MsaG001047	MsaG017541	0.825438	8.323055e-54	2.119032e-51
MsaG001234	MsaG017541	0.808577	4.926820e-50	8.129950e-48
MsaG001294	MsaG017541	0.828525	1.533084e-54	4.254866e-52
MsaG001277	MsaG017541	0.821881	5.611399e-53	1.297199e-50
MsaG001523	MsaG017541	0.836269	1.888536e-56	6.571629e-54
MsaG001767	MsaG017541	0.820642	1.080396e-52	2.416816e-50
MsaG002738	MsaG017541	0.821247	7.848886e-53	1.784206e-50
MsaG003309	MsaG017541	0.852589	8.020376e-61	4.756069e-58
MsaG003756	MsaG017541	0.834914	4.142686e-56	1.384093e-53
MsaG003806	MsaG017541	0.831823	2.422372e-55	7.389795e-53
MsaG004025	MsaG017541	0.812405	7.410238e-51	1.342320e-48
MsaG004031	MsaG017541	0.800945	1.901676e-48	2.626578e-46
MsaG004086	MsaG017541	0.827292	3.026021e-54	8.112397e-52
MsaG004165	MsaG017541	0.808830	4.352665e-50	7.226456e-48
MsaG004191	MsaG017541	0.816233	1.066573e-51	2.127293e-49
MsaG004377	MsaG017541	0.836657	1.506201e-56	5.302435e-54
MsaG004348	MsaG017541	0.819511	1.954907e-52	4.244300e-50
MsaG004433	MsaG017541	0.868373	1.385491e-65	1.500799e-62
MsaG004404	MsaG017541	0.843077	3.258841e-58	1.402843e-55
MsaG004506	MsaG017541	0.831377	3.116913e-55	9.384325e-53
MsaG004967	MsaG017541	0.815297	1.720102e-51	3.350203e-49
MsaG005211	MsaG017541	0.835766	2.529765e-56	8.670246e-54
MsaG005424	MsaG017541	0.807204	9.623453e-50	1.536488e-47
MsaG006277	MsaG017541	0.826519	4.620447e-54	1.212262e-51
MsaG006281	MsaG017541	0.803477	5.760835e-49	8.430752e-47
MsaG006284	MsaG017541	0.803868	4.782490e-49	7.062762e-47
MsaG006366	MsaG017541	0.804014	4.463265e-49	6.613712e-47
MsaG006756	MsaG017541	0.848779	9.346173e-60	4.858694e-57
MsaG006899	MsaG017541	0.833477	9.457659e-56	3.027808e-53
MsaG007063	MsaG017541	0.810020	2.424667e-50	4.142598e-48
MsaG007516	MsaG017541	0.843332	2.788827e-58	1.210375e-55
MsaG007607	MsaG017541	0.816651	8.604393e-52	1.734542e-49
MsaG007841	MsaG017541	0.851000	2.251429e-60	1.263015e-57
MsaG007949	MsaG017541	0.822762	3.512977e-53	8.315706e-51
MsaG007970	MsaG017541	0.856568	5.724989e-62	3.915881e-59
MsaG008118	MsaG017541	0.817021	7.116079e-52	1.448319e-49
MsaG008167	MsaG017541	0.810223	2.193830e-50	3.766770e-48
MsaG008994	MsaG017541	0.801685	1.343936e-48	1.887623e-46
MsaG009348	MsaG017541	0.874233	1.635765e-67	2.274663e-64
MsaG009478	MsaG017541	0.816227	1.069487e-51	2.132818e-49
MsaG009900	MsaG017541	0.839418	2.956978e-57	1.133406e-54
MsaG010009	MsaG017541	0.816657	8.580671e-52	1.729995e-49
MsaG010113	MsaG017541	0.805398	2.301278e-49	3.521249e-47
MsaG010918	MsaG017541	0.837857	7.449546e-57	2.720124e-54
MsaG011438	MsaG017541	0.818581	3.174545e-52	6.726305e-50
MsaG011690	MsaG017541	0.811781	1.012343e-50	1.805716e-48
MsaG012125	MsaG017541	0.853640	4.022943e-61	2.475798e-58
MsaG012161	MsaG017541	0.820830	9.782637e-53	2.199226e-50
MsaG012229	MsaG017541	0.807165	9.807592e-50	1.564459e-47
MsaG012396	MsaG017541	0.821878	5.621495e-53	1.299410e-50
MsaG012488	MsaG017541	0.820284	1.304205e-52	2.890126e-50
MsaG012887	MsaG017541	0.808421	5.318905e-50	8.743733e-48
MsaG013844	MsaG017541	0.817336	6.048001e-52	1.240962e-49
MsaG014283	MsaG017541	0.800290	2.582558e-48	3.514581e-46
MsaG014718	MsaG017541	0.812050	8.850120e-51	1.589042e-48
MsaG016529	MsaG017541	0.827114	3.336117e-54	8.899068e-52
MsaG016573	MsaG017541	0.835310	3.296699e-56	1.114529e-53
MsaG016687	MsaG017541	0.803520	5.643887e-49	8.267960e-47
MsaG017061	MsaG017541	0.824140	1.678754e-53	4.124931e-51
MsaG017134	MsaG017541	0.811333	1.264851e-50	2.231531e-48
MsaG017243	MsaG017541	0.807930	6.757465e-50	1.097876e-47
MsaG017540	MsaG017541	0.813520	4.233347e-51	7.884852e-49
MsaG017541	MsaG017705	0.856798	4.902028e-62	3.380951e-59
MsaG017541	MsaG018034	0.874830	1.028575e-67	1.468423e-64
MsaG017541	MsaG018167	0.841664	7.689215e-58	3.163510e-55
MsaG017541	MsaG018385	0.808883	4.241143e-50	7.050359e-48
MsaG017541	MsaG018437	0.828724	1.373221e-54	3.832192e-52
MsaG017541	MsaG018494	0.804107	4.268481e-49	6.338965e-47
MsaG017541	MsaG018552	0.829540	8.727384e-55	2.492720e-52
MsaG017541	MsaG018649	0.807290	9.230611e-50	1.476774e-47
MsaG017541	MsaG018682	0.816570	8.968738e-52	1.804309e-49
MsaG017541	MsaG018755	0.827069	3.419547e-54	9.109893e-52
MsaG017541	MsaG018785	0.817219	6.422976e-52	1.313986e-49
MsaG017541	MsaG019437	0.825977	6.208985e-54	1.604726e-51
MsaG017541	MsaG019648	0.809359	3.357253e-50	5.645006e-48
MsaG017541	MsaG019970	0.806762	1.192027e-49	1.883541e-47
MsaG017541	MsaG020157	0.844730	1.181226e-58	5.364751e-56
MsaG017541	MsaG020255	0.829318	9.872431e-55	2.801828e-52
MsaG017541	MsaG020499	0.810110	2.319140e-50	3.971066e-48
MsaG017541	MsaG020533	0.810573	1.844419e-50	3.194082e-48
MsaG017541	MsaG020576	0.817379	5.914654e-52	1.214966e-49
MsaG017541	MsaG020798	0.821629	6.414899e-53	1.473032e-50
MsaG017541	MsaG021042	0.802525	9.042261e-49	1.294653e-46
MsaG017541	MsaG021339	0.812557	6.867971e-51	1.248800e-48
MsaG017541	MsaG021433	0.807473	8.443232e-50	1.356727e-47
MsaG017541	MsaG021438	0.826492	4.688682e-54	1.229275e-51
MsaG017541	MsaG021956	0.828976	1.193942e-54	3.355586e-52
MsaG017541	MsaG023554	0.835576	2.824578e-56	9.625947e-54
MsaG017541	MsaG023522	0.854059	3.052277e-61	1.906770e-58
MsaG017541	MsaG023937	0.815685	1.411007e-51	2.775366e-49
MsaG017541	MsaG024046	0.814313	2.835520e-51	5.387357e-49
MsaG017541	MsaG024735	0.831859	2.374541e-55	7.251233e-53
MsaG017541	MsaG026960	0.809308	3.443724e-50	5.783167e-48
MsaG017541	MsaG027021	0.833127	1.155000e-55	3.660009e-53
MsaG017541	MsaG027757	0.803985	4.523413e-49	6.698268e-47
MsaG017541	MsaG027911	0.820858	9.640062e-53	2.168784e-50
MsaG017541	MsaG028107	0.807877	6.937609e-50	1.125693e-47
MsaG017541	MsaG028158	0.811047	1.458011e-50	2.554344e-48
MsaG017541	MsaG028511	0.811464	1.185268e-50	2.097840e-48
MsaG017541	MsaG028585	0.805068	2.696611e-49	4.094710e-47
MsaG017541	MsaG028986	0.804905	2.914719e-49	4.409223e-47
MsaG017541	MsaG029469	0.820075	1.454719e-52	3.205971e-50
MsaG017541	MsaG030014	0.813744	3.780852e-51	7.081612e-49
MsaG017541	MsaG030031	0.832242	1.910720e-55	5.899762e-53
MsaG017541	MsaG030094	0.808952	4.100599e-50	6.827960e-48
MsaG017541	MsaG030215	0.818966	2.598901e-52	5.562428e-50
MsaG017541	MsaG030337	0.852488	8.564900e-61	5.061015e-58
MsaG017541	MsaG030353	0.800124	2.790194e-48	3.783020e-46
MsaG017541	MsaG030361	0.841700	7.523745e-58	3.098862e-55
MsaG017541	MsaG030371	0.835636	2.728220e-56	9.314230e-54
MsaG017541	MsaG030522	0.803797	4.949007e-49	7.296487e-47
MsaG017541	MsaG030665	0.834334	5.788861e-56	1.900872e-53
MsaG017541	MsaG030760	0.819076	2.453921e-52	5.267287e-50
MsaG017541	MsaG030830	0.823182	2.806780e-53	6.719747e-51
MsaG017541	MsaG031093	0.801542	1.437189e-48	2.012045e-46
MsaG017541	MsaG031217	0.833689	8.380102e-56	2.699657e-53
MsaG017541	MsaG031706	0.849432	6.164871e-60	3.277436e-57
MsaG017541	MsaG032712	0.840948	1.184184e-57	4.762580e-55
MsaG017541	MsaG033289	0.854824	1.837879e-61	1.179837e-58
MsaG017541	MsaG033488	0.810013	2.433705e-50	4.157332e-48
MsaG017541	MsaG033807	0.811251	1.317491e-50	2.319705e-48
MsaG017541	MsaG034119	0.800179	2.719158e-48	3.691264e-46
MsaG017541	MsaG034370	0.819833	1.651908e-52	3.616950e-50
MsaG017541	MsaG034379	0.821003	8.929377e-53	2.016793e-50
MsaG017541	MsaG034954	0.807636	7.798757e-50	1.258068e-47
MsaG017541	MsaG035157	0.826895	3.761253e-54	9.972028e-52
MsaG017541	MsaG035467	0.829484	9.005038e-55	2.567902e-52
MsaG017541	MsaG035656	0.806811	1.164275e-49	1.841734e-47
MsaG017541	MsaG036138	0.824661	1.267744e-53	3.159525e-51
MsaG017541	MsaG036331	0.811419	1.212149e-50	2.143022e-48
MsaG017541	MsaG036481	0.819140	2.372674e-52	5.101578e-50
MsaG017541	MsaG036658	0.805103	2.651016e-49	4.028729e-47
MsaG017541	MsaG037150	0.823471	2.403377e-53	5.799285e-51
MsaG017541	MsaG037924	0.856766	5.009004e-62	3.450839e-59
MsaG017541	MsaG037969	0.818525	3.268460e-52	6.915290e-50
MsaG017541	MsaG038993	0.859695	6.792429e-63	5.220107e-60
MsaG017541	MsaG039975	0.808270	5.725598e-50	9.378434e-48
MsaG017541	MsaG039983	0.806499	1.353612e-49	2.125669e-47
MsaG017541	MsaG040261	0.823950	1.859132e-53	4.544598e-51
MsaG017541	MsaG040351	0.834059	6.777956e-56	2.207319e-53
MsaG017541	MsaG040540	0.835911	2.325589e-56	8.005342e-54
MsaG017541	MsaG040685	0.836632	1.528383e-56	5.376487e-54
MsaG017541	MsaG041272	0.808424	5.310981e-50	8.731452e-48
MsaG017541	MsaG041581	0.813744	3.780188e-51	7.080402e-49
MsaG017541	MsaG041704	0.818063	4.153006e-52	8.682376e-50
MsaG017541	MsaG041746	0.821650	6.343767e-53	1.457524e-50
MsaG017541	MsaG041898	0.846036	5.253556e-59	2.491180e-56
MsaG017541	MsaG041955	0.810800	1.648474e-50	2.870605e-48
MsaG017541	MsaG042509	0.822569	3.893160e-53	9.167474e-51
MsaG017541	MsaG042623	0.866282	6.409505e-65	6.374694e-62
MsaG017541	MsaG042654	0.813478	4.323164e-51	8.043519e-49
MsaG017541	MsaG042729	0.823599	2.244624e-53	5.435218e-51
MsaG017541	MsaG043395	0.812411	7.386729e-51	1.338258e-48
MsaG017541	MsaG043554	0.811766	1.019878e-50	1.818483e-48
MsaG017541	MsaG043740	0.816961	7.336202e-52	1.490828e-49
MsaG017541	MsaG044093	0.842570	4.439254e-58	1.880205e-55
MsaG017541	MsaG044228	0.854337	2.539755e-61	1.602512e-58
MsaG017541	MsaG044267	0.800686	2.146301e-48	2.947366e-46
MsaG017541	MsaG044330	0.800597	2.237630e-48	3.066542e-46
MsaG017541	MsaG044542	0.800733	2.099900e-48	2.886608e-46
MsaG017541	MsaG044932	0.821494	6.887672e-53	1.575969e-50
MsaG017541	MsaG045187	0.803223	6.498854e-49	9.455395e-47
MsaG017541	MsaG045275	0.805772	1.922464e-49	2.967434e-47
MsaG017541	MsaG045427	0.830302	5.703671e-55	1.664969e-52
MsaG017541	MsaG045413	0.804546	3.462134e-49	5.193808e-47
MsaG017541	MsaG045534	0.824129	1.688547e-53	4.147825e-51
MsaG017541	MsaG045878	0.803443	5.854722e-49	8.561549e-47
MsaG017541	MsaG045923	0.849949	4.428040e-60	2.395799e-57
MsaG017541	MsaG046278	0.811468	1.183111e-50	2.094203e-48
MsaG017541	MsaG046355	0.804013	4.464367e-49	6.615292e-47
MsaG017541	MsaG046432	0.804119	4.243964e-49	6.304151e-47
MsaG017541	MsaG046584	0.842695	4.115136e-58	1.749842e-55
MsaG017541	MsaG046755	0.847843	1.691802e-59	8.523182e-57
MsaG017541	MsaG046866	0.810216	2.201462e-50	3.779197e-48
MsaG017541	MsaG046929	0.811503	1.162659e-50	2.059775e-48
MsaG017541	MsaG047064	0.827882	2.187232e-54	5.961512e-52
MsaG017541	MsaG004179	0.804996	2.790895e-49	4.230790e-47
MsaG017541	MsaG003078	0.834281	5.967530e-56	1.956339e-53
MsaG017541	MsaG005823	0.821770	5.952522e-53	1.371977e-50
MsaG017541	MsaG002982	0.832803	1.389578e-55	4.361274e-53
MsaG017541	MsaG001341	0.834908	4.159001e-56	1.389258e-53
MsaG017541	MsaG000821	0.833104	1.170679e-55	3.707057e-53
MsaG017541	MsaG007676	0.842859	3.723452e-58	1.591617e-55
MsaG017541	MsaG008384	0.852286	9.774527e-61	5.735504e-58
MsaG017541	MsaG010542	0.840103	1.965790e-57	7.698677e-55
MsaG017541	MsaG007963	0.815149	1.854675e-51	3.598690e-49
MsaG017541	MsaG009219	0.815712	1.392036e-51	2.739894e-49
MsaG017541	MsaG006009	0.848071	1.464708e-59	7.435619e-57
MsaG017541	MsaG013381	0.861762	1.613683e-63	1.341878e-60
MsaG017541	MsaG014915	0.815241	1.769752e-51	3.442086e-49
MsaG017541	MsaG013966	0.808640	4.778122e-50	7.896417e-48
MsaG017541	MsaG012731	0.824977	1.068630e-53	2.686450e-51
MsaG017541	MsaG016523	0.852625	7.833149e-61	4.650875e-58
MsaG017541	MsaG018510	0.839123	3.524344e-57	1.338551e-54
MsaG017541	MsaG019774	0.810118	2.310456e-50	3.956930e-48
MsaG017541	MsaG021762	0.806531	1.333257e-49	2.095248e-47
MsaG017541	MsaG020180	0.826817	3.925900e-54	1.038570e-51
MsaG017541	MsaG020996	0.815841	1.303404e-51	2.573812e-49
MsaG017541	MsaG018137	0.833527	9.194492e-56	2.947811e-53
MsaG017541	MsaG019535	0.820609	1.099215e-52	2.456762e-50
MsaG017541	MsaG029796	0.838243	5.934007e-57	2.192690e-54
MsaG017541	MsaG028156	0.808025	6.454472e-50	1.051021e-47
MsaG017541	MsaG031895	0.824228	1.600461e-53	3.942019e-51
MsaG017541	MsaG030906	0.828118	1.919838e-54	5.267586e-52
MsaG017541	MsaG032586	0.853278	5.104908e-61	3.101739e-58
MsaG017541	MsaG031035	0.842327	5.145173e-58	2.162163e-55
MsaG017541	MsaG036290	0.821600	6.514753e-53	1.494807e-50
MsaG017541	MsaG036541	0.833324	1.032182e-55	3.289518e-53
MsaG017541	MsaG036763	0.826540	4.567617e-54	1.199072e-51
MsaG017541	MsaG037636	0.800932	1.912854e-48	2.641262e-46
MsaG017541	MsaG036860	0.826371	5.008382e-54	1.308640e-51
MsaG017541	MsaG036052	0.809186	3.655854e-50	6.121555e-48
MsaG017541	MsaG041270	0.809130	3.757682e-50	6.283822e-48
MsaG017541	MsaG044173	0.816278	1.042182e-51	2.081046e-49
MsaG017541	MsaG047198	0.839227	3.312835e-57	1.262269e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017541	MtrunA17_Chr3g0141601	94.505	91	5	0	1	91	1	91	1.32e-62	184
MsaG017541	MtrunA17_Chr1g0155181	75.862	87	17	2	1	84	1	86	2.28e-43	135
MsaG017541	MtrunA17_Chr3g0144631	72.059	68	19	0	5	72	14	81	2.20e-33	110
MsaG017541	MtrunA17_Chr3g0081631	57.609	92	34	2	1	91	4	91	1.79e-32	108
MsaG017541	MtrunA17_Chr7g0255841	60.241	83	29	1	9	91	14	92	2.65e-29	100
MsaG017541	MtrunA17_Chr6g0449111	57.143	70	30	0	2	71	5	74	3.20e-26	92.0
MsaG017541	MtrunA17_Chr8g0373111	55.714	70	30	1	4	73	2	70	2.12e-25	90.1
MsaG017541	MtrunA17_Chr8g0373121	55.714	70	30	1	4	73	2	70	2.12e-25	90.1
MsaG017541	MtrunA17_Chr8g0373131	55.714	70	30	1	4	73	2	70	2.63e-25	89.7
MsaG017541	MtrunA17_Chr5g0404101	61.194	67	26	0	3	69	15	81	1.78e-24	88.2
MsaG017541	MtrunA17_Chr3g0141641	45.556	90	44	1	7	91	3	92	2.62e-24	87.8
MsaG017541	MtrunA17_Chr8g0373101	58.571	70	28	1	4	73	2	70	6.00e-24	86.3
MsaG017541	MtrunA17_Chr5g0404301	61.905	63	23	1	5	67	2	63	1.14e-22	82.8
MsaG017541	MtrunA17_Chr8g0364741	53.623	69	32	0	1	69	4	72	2.51e-21	81.3
MsaG017541	MtrunA17_Chr5g0429521	45.652	92	39	1	4	84	26	117	4.68e-21	84.3
MsaG017541	MtrunA17_Chr5g0436501	55.385	65	29	0	5	69	25	89	5.19e-21	83.6
MsaG017541	MtrunA17_Chr1g0162081	56.522	69	30	0	4	72	9	77	5.33e-21	84.0
MsaG017541	MtrunA17_Chr8g0365011	57.576	66	28	0	4	69	5	70	6.11e-21	83.6
MsaG017541	MtrunA17_Chr7g0241761	50.000	78	36	1	5	82	33	107	2.62e-20	82.4
MsaG017541	MtrunA17_Chr3g0104071	53.731	67	31	0	4	70	40	106	3.37e-19	79.7
MsaG017541	MtrunA17_Chr4g0062741	46.667	75	37	2	2	73	3	77	1.50e-17	74.7
MsaG017541	MtrunA17_Chr1g0210471	46.269	67	36	0	5	71	22	88	4.25e-17	72.8
MsaG017541	MtrunA17_Chr1g0194071	49.153	59	29	1	5	62	9	67	3.07e-14	62.4
MsaG017541	MtrunA17_Chr7g0270711	49.206	63	31	1	3	64	7	69	5.72e-14	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017541	AT4G39250.1	59.770	87	33	1	7	91	14	100	1.42e-32	109
MsaG017541	AT2G21650.1	57.955	88	34	1	7	91	14	101	2.28e-31	106
MsaG017541	AT1G75250.1	72.059	68	19	0	2	69	7	74	5.69e-31	105
MsaG017541	AT1G75250.2	62.637	91	32	2	2	90	7	97	1.02e-30	104
MsaG017541	AT1G19510.1	68.182	66	20	1	10	74	15	80	1.16e-25	91.7
MsaG017541	AT2G18328.1	64.516	62	22	0	10	71	14	75	4.46e-25	89.7
MsaG017541	AT2G38090.1	52.174	69	33	0	4	72	26	94	5.50e-21	84.3
MsaG017541	AT5G58900.1	54.545	66	30	0	4	69	31	96	1.57e-20	83.2
MsaG017541	AT5G05790.2	47.436	78	39	1	4	79	28	105	1.55e-19	80.1
MsaG017541	AT5G05790.1	47.436	78	39	1	4	79	28	105	1.55e-19	80.1
MsaG017541	AT4G36570.1	72.727	44	12	0	7	50	12	55	2.84e-18	72.0
MsaG017541	AT3G11280.2	46.053	76	38	1	7	79	33	108	1.87e-17	74.7
MsaG017541	AT3G11280.1	46.053	76	38	1	7	79	33	108	1.87e-17	74.7
MsaG017541	AT5G08520.1	44.737	76	42	0	1	76	6	81	9.86e-16	70.5
MsaG017541	AT5G01200.1	34.951	103	49	2	5	89	28	130	1.43e-15	69.7
MsaG017541	AT1G49010.1	41.250	80	42	2	5	81	6	83	5.58e-14	65.5
MsaG017541	AT5G04760.1	40.299	67	39	1	3	69	2	67	6.73e-13	61.6
MsaG017541	AT5G23650.1	42.029	69	40	0	1	69	7	75	5.60e-12	60.1

Find 26 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAACATTATTTGTGTAATT+AGG	0.311673	3:-110522204	None:intergenic
AGAACCTTGTTGAAGATATT+AGG	0.315510	3:+110522154	MsaT017541.1:CDS
ACATAATGGATCAAGATAAA+AGG	0.337165	3:+110522235	MsaT017541.1:CDS
TAATGGCTTCAAGTTCGAAT+TGG	0.366111	3:+110522004	None:intergenic
TGTTGGTTACAATTACATAA+TGG	0.412132	3:+110522221	MsaT017541.1:CDS
CATTATTTGTGTAATTAGGC+AGG	0.435090	3:-110522200	None:intergenic
GCCACCTTCTGCCAACGATC+AGG	0.467098	3:-110522084	None:intergenic
TGAGAATGCGTTGGCAATGT+TGG	0.488680	3:+110522050	MsaT017541.1:CDS
TGTAATTAGGCAGGGGAACA+TGG	0.488710	3:-110522191	None:intergenic
CCTAATTACACAAATAATGT+TGG	0.495931	3:+110522204	MsaT017541.1:CDS
AGGCTCTAAGTCTCCACTAA+AGG	0.510302	3:+110522726	MsaT017541.1:CDS
ATTATTTGTGTAATTAGGCA+GGG	0.547965	3:-110522199	None:intergenic
GCAGAAGGTGGCTAGAGCTG+TGG	0.552998	3:+110522095	MsaT017541.1:CDS
CAAAAGATTTGAGAATGCGT+TGG	0.553213	3:+110522041	MsaT017541.1:CDS
TCATGCATGATGCAGGATGA+AGG	0.557115	3:+110522706	MsaT017541.1:intron
CAGAAGGTGGCTAGAGCTGT+GGG	0.558074	3:+110522096	MsaT017541.1:CDS
CACTCCTGATCGTTGGCAGA+AGG	0.576549	3:+110522080	MsaT017541.1:CDS
GATATTAGGCAGATCGAGGA+AGG	0.589514	3:+110522168	MsaT017541.1:CDS
TTATTTGTGTAATTAGGCAG+GGG	0.601636	3:-110522198	None:intergenic
TCCTGATCGTTGGCAGAAGG+TGG	0.602919	3:+110522083	MsaT017541.1:CDS
ACAAGGACACTCCTGATCGT+TGG	0.625458	3:+110522073	MsaT017541.1:CDS
TGCGTTGGCAATGTTGGACA+AGG	0.631324	3:+110522056	MsaT017541.1:CDS
TGAAGATATTAGGCAGATCG+AGG	0.643314	3:+110522164	MsaT017541.1:CDS
AGGTGGCTAGAGCTGTGGGA+GGG	0.662019	3:+110522100	MsaT017541.1:CDS
AAGGTGGCTAGAGCTGTGGG+AGG	0.685328	3:+110522099	MsaT017541.1:CDS
TCTGCCTAATATCTTCAACA+AGG	0.692316	3:-110522158	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	110522006	110522745	110522006	ID=MsaG017541
Chr3	mRNA	110522006	110522745	110522006	ID=MsaT017541.1;Parent=MsaG017541
Chr3	exon	110522006	110522256	110522006	ID=MsaT017541.1.exon1;Parent=MsaT017541.1
Chr3	CDS	110522006	110522256	110522006	ID=cds.MsaT017541.1;Parent=MsaT017541.1
Chr3	exon	110522721	110522745	110522721	ID=MsaT017541.1.exon2;Parent=MsaT017541.1
Chr3	CDS	110522721	110522745	110522721	ID=cds.MsaT017541.1;Parent=MsaT017541.1

Gene Sequence	>MsaT017541.1 ATGGCTTCAAGTTCGAATTGGACCGCAAAGCAGAACAAAAGATTTGAGAATGCGTTGGCAATGTTGGACAAGGACACTCCTGATCGTTGGCAGAAGGTGGCTAGAGCTGTGGGAGGGAAGACTGTTGAAGAAGTGAAAAGACATTATGAGAACCTTGTTGAAGATATTAGGCAGATCGAGGAAGGCCATGTTCCCCTGCCTAATTACACAAATAATGTTGGTTACAATTACATAATGGATCAAGATAAAAGGATGAAGGCTCTAAGTCTCCACTAA
Protein sequence	>MsaT017541.1 MASSSNWTAKQNKRFENALAMLDKDTPDRWQKVARAVGGKTVEEVKRHYENLVEDIRQIEEGHVPLPNYTNNVGYNYIMDQDKRMKALSLH*