AlfalfaGEDB | MsaG017644

M. sativa ssp. caerulea / MsaG017644

KEGG: K09522
GO: GO:0001558 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0030308 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0040008 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045926 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061649 GO:0065007 GO:0080090 GO:0140030 GO:0140035 GO:0140036 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00226.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017644	XP_013462221.2	97.706	654	14	1	1	654	1	653	0.0	1310

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017644	sp\|Q7TQ20\|DNJC2_RAT	35.294	595	284	16	92	653	83	609	2.71e-89	293

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017644	tr\|A0A396IZE3\|A0A396IZE3_MEDTR	97.706	654	14	1	1	654	1	653	0.0	1310

TFs/TRs:

Gene ID	Type	Classification
MsaG017644	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG017644	0.841480	8.592047e-58	3.514367e-55
MsaG000412	MsaG017644	0.805910	1.799217e-49	2.786196e-47
MsaG000436	MsaG017644	0.800003	2.952580e-48	3.992419e-46
MsaG000459	MsaG017644	0.842152	5.723764e-58	2.391685e-55
MsaG000717	MsaG017644	0.882255	2.586057e-70	5.187404e-67
MsaG000847	MsaG017644	0.837579	8.774754e-57	3.176914e-54
MsaG001026	MsaG017644	0.851281	1.877923e-60	1.063723e-57
MsaG001134	MsaG017644	0.834580	5.024931e-56	1.662152e-53
MsaG001468	MsaG017644	0.812012	9.017227e-51	1.617592e-48
MsaG001542	MsaG017644	0.839475	2.859018e-57	1.097875e-54
MsaG001551	MsaG017644	0.904647	2.320434e-79	1.564886e-75
MsaG001730	MsaG017644	0.862828	7.622720e-64	6.607985e-61
MsaG001810	MsaG017644	0.842305	5.214304e-58	2.189606e-55
MsaG001939	MsaG017644	0.903639	6.593279e-79	4.186536e-75
MsaG002043	MsaG017644	0.841342	9.338018e-58	3.802707e-55
MsaG002379	MsaG017644	0.890960	1.355038e-73	4.197891e-70
MsaG002481	MsaG017644	0.805437	2.259049e-49	3.459712e-47
MsaG002489	MsaG017644	0.898647	9.877240e-77	4.668677e-73
MsaG002603	MsaG017644	0.869083	8.180737e-66	9.123807e-63
MsaG003329	MsaG017644	0.850561	2.989945e-60	1.652079e-57
MsaG003422	MsaG017644	0.898353	1.316088e-76	6.117441e-73
MsaG003470	MsaG017644	0.855761	9.838703e-62	6.532930e-59
MsaG003665	MsaG017644	0.866238	6.618158e-65	6.571138e-62
MsaG003831	MsaG017644	0.811607	1.103882e-50	1.960614e-48
MsaG003861	MsaG017644	0.919972	5.892175e-87	1.108213e-82
MsaG004006	MsaG017644	0.839779	2.384938e-57	9.245929e-55
MsaG003932	MsaG017644	0.847938	1.592707e-59	8.049261e-57
MsaG003936	MsaG017644	0.855358	1.287935e-61	8.428799e-59
MsaG004070	MsaG017644	0.835619	2.755439e-56	9.402406e-54
MsaG004085	MsaG017644	0.819478	1.989500e-52	4.315718e-50
MsaG004107	MsaG017644	0.941911	5.428854e-101	6.059672e-96
MsaG004112	MsaG017644	0.801602	1.396978e-48	1.958458e-46
MsaG004184	MsaG017644	0.921044	1.523967e-87	3.097026e-83
MsaG004364	MsaG017644	0.813619	4.026634e-51	7.518307e-49
MsaG004452	MsaG017644	0.885218	2.118031e-71	4.904271e-68
MsaG004556	MsaG017644	0.824749	1.208601e-53	3.019423e-51
MsaG004819	MsaG017644	0.851513	1.616203e-60	9.228824e-58
MsaG004854	MsaG017644	0.800082	2.845960e-48	3.854981e-46
MsaG004924	MsaG017644	0.833205	1.104994e-55	3.509440e-53
MsaG005017	MsaG017644	0.825560	7.788778e-54	1.989731e-51
MsaG005060	MsaG017644	0.833864	7.580467e-56	2.454395e-53
MsaG005062	MsaG017644	0.847048	2.789618e-59	1.368272e-56
MsaG005100	MsaG017644	0.811111	1.413057e-50	2.479414e-48
MsaG005189	MsaG017644	0.810458	1.952819e-50	3.372400e-48
MsaG005280	MsaG017644	0.861164	2.452792e-63	1.993457e-60
MsaG005336	MsaG017644	0.846263	4.559882e-59	2.178641e-56
MsaG005410	MsaG017644	0.867164	3.371004e-65	3.475085e-62
MsaG005423	MsaG017644	0.801205	1.683624e-48	2.339069e-46
MsaG005452	MsaG017644	0.801901	1.213909e-48	1.713445e-46
MsaG005496	MsaG017644	0.876836	2.121050e-68	3.310493e-65
MsaG005497	MsaG017644	0.858247	1.834613e-62	1.335177e-59
MsaG005526	MsaG017644	0.872576	5.867960e-67	7.589716e-64
MsaG005603	MsaG017644	0.881721	4.030612e-70	7.886697e-67
MsaG005722	MsaG017644	0.872058	8.719277e-67	1.102891e-63
MsaG005754	MsaG017644	0.802851	7.753915e-49	1.118435e-46
MsaG005792	MsaG017644	0.859188	9.632208e-63	7.261631e-60
MsaG005869	MsaG017644	0.923390	7.385078e-89	1.789603e-84
MsaG005897	MsaG017644	0.827883	2.186436e-54	5.959480e-52
MsaG006245	MsaG017644	0.828077	1.963982e-54	5.382287e-52
MsaG006471	MsaG017644	0.867657	2.347261e-65	2.469069e-62
MsaG006500	MsaG017644	0.834081	6.691985e-56	2.180687e-53
MsaG006555	MsaG017644	0.834152	6.427230e-56	2.098847e-53
MsaG006620	MsaG017644	0.813775	3.721969e-51	6.976830e-49
MsaG006657	MsaG017644	0.813276	4.786033e-51	8.859536e-49
MsaG006809	MsaG017644	0.854144	2.884658e-61	1.807582e-58
MsaG006827	MsaG017644	0.801129	1.744448e-48	2.419457e-46
MsaG007036	MsaG017644	0.834401	5.568296e-56	1.832148e-53
MsaG007091	MsaG017644	0.884540	3.778127e-71	8.461399e-68
MsaG007139	MsaG017644	0.846902	3.057058e-59	1.492055e-56
MsaG007442	MsaG017644	0.877651	1.108085e-68	1.794720e-65
MsaG007455	MsaG017644	0.828800	1.316856e-54	3.682705e-52
MsaG007416	MsaG017644	0.815819	1.317791e-51	2.600830e-49
MsaG007616	MsaG017644	0.842805	3.846984e-58	1.641588e-55
MsaG007630	MsaG017644	0.821271	7.750850e-53	1.763079e-50
MsaG007817	MsaG017644	0.861425	2.043780e-63	1.677591e-60
MsaG007828	MsaG017644	0.824365	1.487265e-53	3.677002e-51
MsaG008084	MsaG017644	0.816112	1.134242e-51	2.255271e-49
MsaG008221	MsaG017644	0.811199	1.352545e-50	2.378331e-48
MsaG008222	MsaG017644	0.806645	1.261620e-49	1.987992e-47
MsaG008234	MsaG017644	0.910362	4.937295e-82	4.774274e-78
MsaG008511	MsaG017644	0.802624	8.630067e-49	1.238443e-46
MsaG008561	MsaG017644	0.861334	2.177002e-63	1.780863e-60
MsaG008619	MsaG017644	0.914419	4.856503e-84	6.164908e-80
MsaG008643	MsaG017644	0.827636	2.504512e-54	6.779321e-52
MsaG009289	MsaG017644	0.836256	1.903389e-56	6.620612e-54
MsaG009389	MsaG017644	0.838105	6.436592e-57	2.368364e-54
MsaG009648	MsaG017644	0.842323	5.160311e-58	2.168202e-55
MsaG009656	MsaG017644	0.819097	2.426208e-52	5.210859e-50
MsaG010706	MsaG017644	0.854033	3.105018e-61	1.937911e-58
MsaG010829	MsaG017644	0.803373	6.053607e-49	8.838023e-47
MsaG011175	MsaG017644	0.803560	5.537281e-49	8.119372e-47
MsaG011244	MsaG017644	0.810909	1.562042e-50	2.727276e-48
MsaG011474	MsaG017644	0.802314	9.993694e-49	1.423975e-46
MsaG011484	MsaG017644	0.825372	8.627307e-54	2.192545e-51
MsaG011560	MsaG017644	0.825358	8.691812e-54	2.208080e-51
MsaG011584	MsaG017644	0.841139	1.055511e-57	4.270934e-55
MsaG011704	MsaG017644	0.804193	4.097256e-49	6.096602e-47
MsaG011831	MsaG017644	0.882348	2.392616e-70	4.820922e-67
MsaG011873	MsaG017644	0.814998	2.002936e-51	3.871712e-49
MsaG011887	MsaG017644	0.809939	2.523933e-50	4.303751e-48
MsaG012015	MsaG017644	0.828008	2.040256e-54	5.580603e-52
MsaG012224	MsaG017644	0.804580	3.406319e-49	5.114039e-47
MsaG012294	MsaG017644	0.856723	5.155669e-62	3.546306e-59
MsaG012522	MsaG017644	0.846442	4.077195e-59	1.959542e-56
MsaG012549	MsaG017644	0.823310	2.620397e-53	6.295442e-51
MsaG012723	MsaG017644	0.914295	5.609337e-84	7.059501e-80
MsaG013271	MsaG017644	0.868395	1.362261e-65	1.476968e-62
MsaG013839	MsaG017644	0.862936	7.058923e-64	6.145334e-61
MsaG014075	MsaG017644	0.804465	3.599048e-49	5.388941e-47
MsaG014815	MsaG017644	0.881857	3.599918e-70	7.088738e-67
MsaG014848	MsaG017644	0.811306	1.282276e-50	2.260777e-48
MsaG014855	MsaG017644	0.831312	3.233495e-55	9.716700e-53
MsaG015018	MsaG017644	0.835230	3.452927e-56	1.164531e-53
MsaG015236	MsaG017644	0.841477	8.610641e-58	3.521606e-55
MsaG015371	MsaG017644	0.890138	2.840371e-73	8.431530e-70
MsaG015485	MsaG017644	0.810501	1.911249e-50	3.304047e-48
MsaG015493	MsaG017644	0.858875	1.193460e-62	8.891822e-60
MsaG015871	MsaG017644	0.820970	9.085693e-53	2.050311e-50
MsaG016209	MsaG017644	0.949990	1.327835e-107	3.008189e-102
MsaG016215	MsaG017644	0.907928	7.130521e-81	5.894750e-77
MsaG016273	MsaG017644	0.836139	2.037402e-56	7.061736e-54
MsaG016327	MsaG017644	0.901477	5.963416e-78	3.328381e-74
MsaG016397	MsaG017644	0.837242	1.069590e-56	3.832643e-54
MsaG016419	MsaG017644	0.839612	2.634477e-57	1.015956e-54
MsaG016471	MsaG017644	0.873313	3.331606e-67	4.449524e-64
MsaG016695	MsaG017644	0.867728	2.228438e-65	2.350907e-62
MsaG016772	MsaG017644	0.825560	7.788778e-54	1.989731e-51
MsaG016884	MsaG017644	0.855199	1.432305e-61	9.319582e-59
MsaG017009	MsaG017644	0.916027	7.286689e-85	1.031580e-80
MsaG017051	MsaG017644	0.896163	1.084115e-75	4.452016e-72
MsaG017068	MsaG017644	0.822466	4.111309e-53	9.654548e-51
MsaG017081	MsaG017644	0.847226	2.495567e-59	1.231390e-56
MsaG017189	MsaG017644	0.871709	1.136947e-66	1.416754e-63
MsaG017324	MsaG017644	0.871084	1.825381e-66	2.214555e-63
MsaG017431	MsaG017644	0.811040	1.463305e-50	2.563174e-48
MsaG017495	MsaG017644	0.847076	2.741274e-59	1.345811e-56
MsaG017642	MsaG017644	0.800119	2.796097e-48	3.790621e-46
MsaG017644	MsaG017699	0.904401	2.995576e-79	1.991077e-75
MsaG017644	MsaG017700	0.824953	1.082762e-53	2.720155e-51
MsaG017644	MsaG017719	0.824754	1.205192e-53	3.011343e-51
MsaG017644	MsaG017827	0.867480	2.672997e-65	2.790857e-62
MsaG017644	MsaG017828	0.818647	3.066975e-52	6.509685e-50
MsaG017644	MsaG017954	0.896257	9.919057e-76	4.095521e-72
MsaG017644	MsaG017983	0.888572	1.145840e-72	3.136684e-69
MsaG017644	MsaG018035	0.851906	1.251429e-60	7.246277e-58
MsaG017644	MsaG018054	0.847808	1.729435e-59	8.702560e-57
MsaG017644	MsaG018085	0.811889	9.590020e-51	1.715182e-48
MsaG017644	MsaG018286	0.853339	4.903827e-61	2.985908e-58
MsaG017644	MsaG018295	0.811835	9.853444e-51	1.759929e-48
MsaG017644	MsaG018641	0.811029	1.471146e-50	2.576206e-48
MsaG017644	MsaG018754	0.851198	1.981050e-60	1.118973e-57
MsaG017644	MsaG018777	0.813381	4.540457e-51	8.427283e-49
MsaG017644	MsaG018798	0.806907	1.111252e-49	1.761824e-47
MsaG017644	MsaG019120	0.905276	1.201268e-79	8.412824e-76
MsaG017644	MsaG019160	0.835154	3.606989e-56	1.213769e-53
MsaG017644	MsaG019203	0.811222	1.337026e-50	2.352424e-48
MsaG017644	MsaG019223	0.879309	2.912775e-69	5.092266e-66
MsaG017644	MsaG019237	0.852999	6.132886e-61	3.690052e-58
MsaG017644	MsaG019466	0.825280	9.067496e-54	2.298537e-51
MsaG017644	MsaG019491	0.845391	7.847338e-59	3.642587e-56
MsaG017644	MsaG019526	0.824490	1.390196e-53	3.448686e-51
MsaG017644	MsaG019527	0.852156	1.063649e-60	6.212738e-58
MsaG017644	MsaG019559	0.843015	3.385903e-58	1.454585e-55
MsaG017644	MsaG019597	0.857559	2.928331e-62	2.077201e-59
MsaG017644	MsaG019638	0.829549	8.684032e-55	2.480973e-52
MsaG017644	MsaG019649	0.902430	2.272877e-78	1.341983e-74
MsaG017644	MsaG019672	0.862968	6.904273e-64	6.018005e-61
MsaG017644	MsaG019720	0.874971	9.209159e-68	1.322744e-64
MsaG017644	MsaG019910	0.801424	1.518703e-48	2.120520e-46
MsaG017644	MsaG019907	0.918044	6.399326e-86	1.046595e-81
MsaG017644	MsaG019936	0.835675	2.668132e-56	9.119424e-54
MsaG017644	MsaG019944	0.820633	1.085282e-52	2.427168e-50
MsaG017644	MsaG019977	0.822766	3.503797e-53	8.295202e-51
MsaG017644	MsaG020021	0.919598	9.407962e-87	1.719560e-82
MsaG017644	MsaG020240	0.846128	4.960955e-59	2.359653e-56
MsaG017644	MsaG020321	0.839018	3.752175e-57	1.420469e-54
MsaG017644	MsaG020382	0.882277	2.538448e-70	5.097012e-67
MsaG017644	MsaG020371	0.800433	2.415602e-48	3.298173e-46
MsaG017644	MsaG020407	0.851121	2.082177e-60	1.172970e-57
MsaG017644	MsaG020492	0.825079	1.011221e-53	2.549252e-51
MsaG017644	MsaG020550	0.881736	3.979703e-70	7.792146e-67
MsaG017644	MsaG020591	0.806084	1.654444e-49	2.572583e-47
MsaG017644	MsaG020598	0.823114	2.910334e-53	6.954898e-51
MsaG017644	MsaG020733	0.922276	3.148347e-88	7.015356e-84
MsaG017644	MsaG020992	0.831467	2.962561e-55	8.943242e-53
MsaG017644	MsaG021200	0.834278	5.976764e-56	1.959207e-53
MsaG017644	MsaG021222	0.858253	1.826941e-62	1.329926e-59
MsaG017644	MsaG021515	0.870198	3.559009e-66	4.158550e-63
MsaG017644	MsaG022757	0.816043	1.175192e-51	2.332578e-49
MsaG017644	MsaG022766	0.814797	2.218761e-51	4.267134e-49
MsaG017644	MsaG022811	0.856917	4.524131e-62	3.133883e-59
MsaG017644	MsaG022899	0.846503	3.926032e-59	1.890727e-56
MsaG017644	MsaG023117	0.833157	1.135497e-55	3.601390e-53
MsaG017644	MsaG023188	0.892315	3.948406e-74	1.315131e-70
MsaG017644	MsaG023563	0.820818	9.846754e-53	2.212956e-50
MsaG017644	MsaG023626	0.810347	2.063528e-50	3.553929e-48
MsaG017644	MsaG023649	0.897161	4.173597e-76	1.813659e-72
MsaG017644	MsaG023711	0.863208	5.821608e-64	5.122196e-61
MsaG017644	MsaG023716	0.834904	4.167526e-56	1.391975e-53
MsaG017644	MsaG023729	0.889501	5.022854e-73	1.442478e-69
MsaG017644	MsaG023793	0.843066	3.281723e-58	1.412153e-55
MsaG017644	MsaG023794	0.821213	7.992967e-53	1.815307e-50
MsaG017644	MsaG023834	0.835502	2.949220e-56	1.002842e-53
MsaG017644	MsaG023861	0.908614	3.385244e-81	2.925899e-77
MsaG017644	MsaG024134	0.874149	1.746492e-67	2.419543e-64
MsaG017644	MsaG024295	0.897760	2.340034e-76	1.052115e-72
MsaG017644	MsaG024282	0.808271	5.722635e-50	9.373824e-48
MsaG017644	MsaG024480	0.861872	1.494406e-63	1.247962e-60
MsaG017644	MsaG024571	0.842256	5.373316e-58	2.252713e-55
MsaG017644	MsaG024745	0.822901	3.260822e-53	7.747785e-51
MsaG017644	MsaG025143	0.902962	1.321682e-78	8.057927e-75
MsaG017644	MsaG025153	0.837349	1.004296e-56	3.610538e-54
MsaG017644	MsaG025641	0.830622	4.765958e-55	1.403978e-52
MsaG017644	MsaG025740	0.838531	5.007111e-57	1.866936e-54
MsaG017644	MsaG026022	0.804705	3.208178e-49	4.830534e-47
MsaG017644	MsaG026585	0.824804	1.173181e-53	2.935362e-51
MsaG017644	MsaG026587	0.854035	3.100470e-61	1.935219e-58
MsaG017644	MsaG026686	0.927291	3.861665e-91	1.268397e-86
MsaG017644	MsaG026692	0.885851	1.229800e-71	2.937816e-68
MsaG017644	MsaG026786	0.809664	2.889478e-50	4.894567e-48
MsaG017644	MsaG027170	0.860117	5.075685e-63	3.964353e-60
MsaG017644	MsaG027198	0.897402	3.307678e-76	1.457206e-72
MsaG017644	MsaG027207	0.893958	8.648979e-75	3.148374e-71
MsaG017644	MsaG027210	0.896701	6.486343e-76	2.744969e-72
MsaG017644	MsaG027291	0.819046	2.492423e-52	5.345806e-50
MsaG017644	MsaG027376	0.874053	1.881305e-67	2.595509e-64
MsaG017644	MsaG027483	0.830926	4.018132e-55	1.194100e-52
MsaG017644	MsaG027511	0.808571	4.942705e-50	8.154855e-48
MsaG017644	MsaG027572	0.847606	1.963588e-59	9.812955e-57
MsaG017644	MsaG027715	0.820558	1.129006e-52	2.520023e-50
MsaG017644	MsaG027738	0.856707	5.211248e-62	3.582487e-59
MsaG017644	MsaG027828	0.880825	8.447053e-70	1.584848e-66
MsaG017644	MsaG027807	0.804356	3.791016e-49	5.662313e-47
MsaG017644	MsaG027963	0.878067	7.936768e-69	1.310328e-65
MsaG017644	MsaG027984	0.857967	2.219488e-62	1.598538e-59
MsaG017644	MsaG027987	0.859000	1.095765e-62	8.202153e-60
MsaG017644	MsaG027988	0.823241	2.719560e-53	6.521388e-51
MsaG017644	MsaG028028	0.839069	3.640277e-57	1.380304e-54
MsaG017644	MsaG028193	0.861385	2.100850e-63	1.721836e-60
MsaG017644	MsaG028211	0.878079	7.859444e-69	1.298393e-65
MsaG017644	MsaG028277	0.840345	1.700597e-57	6.711072e-55
MsaG017644	MsaG028335	0.845693	6.503816e-59	3.049285e-56
MsaG017644	MsaG028420	0.839092	3.590708e-57	1.362447e-54
MsaG017644	MsaG028531	0.907719	8.933035e-81	7.292801e-77
MsaG017644	MsaG028623	0.841835	6.933494e-58	2.868144e-55
MsaG017644	MsaG028781	0.843280	2.879180e-58	1.247442e-55
MsaG017644	MsaG028852	0.807633	7.810677e-50	1.259900e-47
MsaG017644	MsaG029048	0.851590	1.536662e-60	8.797690e-58
MsaG017644	MsaG029053	0.850389	3.338208e-60	1.833411e-57
MsaG017644	MsaG029141	0.876102	3.789454e-68	5.723976e-65
MsaG017644	MsaG029091	0.900000	2.609602e-77	1.334941e-73
MsaG017644	MsaG029152	0.814049	3.239910e-51	6.114956e-49
MsaG017644	MsaG029204	0.814868	2.140089e-51	4.123231e-49
MsaG017644	MsaG029212	0.855751	9.904594e-62	6.574335e-59
MsaG017644	MsaG029213	0.833097	1.175000e-55	3.719979e-53
MsaG017644	MsaG029307	0.854637	2.081112e-61	1.327112e-58
MsaG017644	MsaG029371	0.806769	1.187910e-49	1.877365e-47
MsaG017644	MsaG029402	0.854871	1.780978e-61	1.145269e-58
MsaG017644	MsaG029422	0.806047	1.684172e-49	2.616512e-47
MsaG017644	MsaG029561	0.812199	8.214542e-51	1.480368e-48
MsaG017644	MsaG029546	0.924238	2.416548e-89	6.241661e-85
MsaG017644	MsaG029618	0.828580	1.487045e-54	4.133398e-52
MsaG017644	MsaG029802	0.825826	6.740061e-54	1.734652e-51
MsaG017644	MsaG029953	0.914514	4.343026e-84	5.550424e-80
MsaG017644	MsaG029919	0.816281	1.040672e-51	2.078171e-49
MsaG017644	MsaG030396	0.860722	3.336771e-63	2.667106e-60
MsaG017644	MsaG030649	0.810312	2.099475e-50	3.612651e-48
MsaG017644	MsaG030902	0.801916	1.205249e-48	1.701769e-46
MsaG017644	MsaG031091	0.813987	3.343032e-51	6.299965e-49
MsaG017644	MsaG031129	0.843168	3.083199e-58	1.331053e-55
MsaG017644	MsaG031248	0.815173	1.832299e-51	3.557473e-49
MsaG017644	MsaG032279	0.850816	2.536322e-60	1.413883e-57
MsaG017644	MsaG032616	0.864223	2.826663e-64	2.589213e-61
MsaG017644	MsaG032848	0.867929	1.922187e-65	2.044311e-62
MsaG017644	MsaG032901	0.883761	7.309897e-71	1.576856e-67
MsaG017644	MsaG032915	0.867080	3.583600e-65	3.682263e-62
MsaG017644	MsaG033051	0.825350	8.732642e-54	2.217944e-51
MsaG017644	MsaG033231	0.803688	5.210714e-49	7.663146e-47
MsaG017644	MsaG033670	0.872937	4.449039e-67	5.845519e-64
MsaG017644	MsaG033721	0.810600	1.820343e-50	3.154426e-48
MsaG017644	MsaG033781	0.821131	8.346482e-53	1.891502e-50
MsaG017644	MsaG033818	0.809794	2.711091e-50	4.606894e-48
MsaG017644	MsaG034047	0.814397	2.716577e-51	5.172431e-49
MsaG017644	MsaG034217	0.879763	2.013897e-69	3.595092e-66
MsaG017644	MsaG034319	0.807695	7.580095e-50	1.224544e-47
MsaG017644	MsaG034590	0.849568	5.654282e-60	3.020030e-57
MsaG017644	MsaG034836	0.836566	1.588247e-56	5.576001e-54
MsaG017644	MsaG035156	0.829933	7.007961e-55	2.024309e-52
MsaG017644	MsaG035277	0.830322	5.639818e-55	1.647283e-52
MsaG017644	MsaG035380	0.826372	5.006337e-54	1.308141e-51
MsaG017644	MsaG035657	0.811872	9.669929e-51	1.728745e-48
MsaG017644	MsaG036065	0.841315	9.495333e-58	3.863464e-55
MsaG017644	MsaG036423	0.870944	2.029823e-66	2.448203e-63
MsaG017644	MsaG036447	0.820662	1.068623e-52	2.391732e-50
MsaG017644	MsaG038749	0.824556	1.341118e-53	3.332973e-51
MsaG017644	MsaG039178	0.823878	1.932231e-53	4.714142e-51
MsaG017644	MsaG039734	0.854327	2.555468e-61	1.611884e-58
MsaG017644	MsaG039902	0.838135	6.325995e-57	2.329767e-54
MsaG017644	MsaG039981	0.827210	3.165470e-54	8.466471e-52
MsaG017644	MsaG040270	0.878221	7.011656e-69	1.165942e-65
MsaG017644	MsaG040504	0.908266	4.939764e-81	4.173975e-77
MsaG017644	MsaG040577	0.863873	3.630415e-64	3.279176e-61
MsaG017644	MsaG040598	0.810220	2.197100e-50	3.772087e-48
MsaG017644	MsaG040600	0.844460	1.395762e-58	6.282783e-56
MsaG017644	MsaG041334	0.867520	2.596494e-65	2.715813e-62
MsaG017644	MsaG041717	0.861025	2.700912e-63	2.183455e-60
MsaG017644	MsaG041754	0.909577	1.178432e-81	1.083256e-77
MsaG017644	MsaG041800	0.854822	1.839893e-61	1.181063e-58
MsaG017644	MsaG042624	0.802376	9.701240e-49	1.384292e-46
MsaG017644	MsaG042746	0.815508	1.545003e-51	3.025169e-49
MsaG017644	MsaG042928	0.800001	2.954337e-48	3.994690e-46
MsaG017644	MsaG042996	0.852321	9.554399e-61	5.613155e-58
MsaG017644	MsaG043371	0.814490	2.591879e-51	4.946296e-49
MsaG017644	MsaG043669	0.800355	2.505076e-48	3.414320e-46
MsaG017644	MsaG043725	0.885874	1.205555e-71	2.882811e-68
MsaG017644	MsaG043788	0.839536	2.756504e-57	1.060473e-54
MsaG017644	MsaG043817	0.910536	4.071703e-82	3.984483e-78
MsaG017644	MsaG044117	0.885527	1.624342e-71	3.816965e-68
MsaG017644	MsaG044104	0.821041	8.751421e-53	1.978609e-50
MsaG017644	MsaG044200	0.930902	2.281264e-93	9.977773e-89
MsaG017644	MsaG044274	0.800638	2.195554e-48	3.011678e-46
MsaG017644	MsaG044456	0.820638	1.082246e-52	2.420739e-50
MsaG017644	MsaG044661	0.802397	9.609600e-49	1.371852e-46
MsaG017644	MsaG044864	0.871933	9.589779e-67	1.206665e-63
MsaG017644	MsaG044997	0.802343	9.856081e-49	1.405317e-46
MsaG017644	MsaG045284	0.929293	2.323064e-92	8.926894e-88
MsaG017644	MsaG045330	0.803721	5.129457e-49	7.549536e-47
MsaG017644	MsaG045331	0.814099	3.160377e-51	5.972332e-49
MsaG017644	MsaG045365	0.818479	3.347165e-52	7.073284e-50
MsaG017644	MsaG045428	0.806055	1.677947e-49	2.607340e-47
MsaG017644	MsaG045580	0.806929	1.099386e-49	1.743920e-47
MsaG017644	MsaG045581	0.838481	5.156158e-57	1.919463e-54
MsaG017644	MsaG045819	0.893593	1.214894e-74	4.335405e-71
MsaG017644	MsaG045832	0.874588	1.241209e-67	1.753267e-64
MsaG017644	MsaG045969	0.872645	5.568023e-67	7.223227e-64
MsaG017644	MsaG046041	0.827035	3.482995e-54	9.270369e-52
MsaG017644	MsaG046078	0.834870	4.250534e-56	1.418265e-53
MsaG017644	MsaG046123	0.873880	2.151757e-67	2.946345e-64
MsaG017644	MsaG046173	0.882288	2.515689e-70	5.054036e-67
MsaG017644	MsaG046175	0.817737	4.916594e-52	1.019255e-49
MsaG017644	MsaG046306	0.864784	1.892269e-64	1.772389e-61
MsaG017644	MsaG046540	0.831459	2.976673e-55	8.983570e-53
MsaG017644	MsaG046522	0.873502	2.880089e-67	3.878075e-64
MsaG017644	MsaG046501	0.912233	6.022009e-83	6.588202e-79
MsaG017644	MsaG046503	0.847098	2.704462e-59	1.328662e-56
MsaG017644	MsaG046603	0.921803	5.782324e-88	1.242762e-83
MsaG017644	MsaG046730	0.831355	3.155244e-55	9.493674e-53
MsaG017644	MsaG046780	0.818884	2.711535e-52	5.790851e-50
MsaG017644	MsaG046902	0.851643	1.484852e-60	8.517475e-58
MsaG017644	MsaG046939	0.857845	2.411602e-62	1.729088e-59
MsaG017644	MsaG046960	0.808236	5.821892e-50	9.528336e-48
MsaG017644	MsaG046972	0.823411	2.481987e-53	5.979260e-51
MsaG017644	MsaG046975	0.884097	5.501386e-71	1.206055e-67
MsaG017644	MsaG047069	0.841216	1.007614e-57	4.087073e-55
MsaG017644	MsaG047077	0.876210	3.481662e-68	5.284994e-65
MsaG017644	MsaG047097	0.904583	2.480062e-79	1.666619e-75
MsaG017644	MsaG002654	0.837214	1.087361e-56	3.893041e-54
MsaG017644	MsaG002000	0.856831	4.792923e-62	3.309828e-59
MsaG017644	MsaG001807	0.861999	1.367039e-63	1.147215e-60
MsaG017644	MsaG000634	0.809763	2.752791e-50	4.674130e-48
MsaG017644	MsaG001987	0.875820	4.734515e-68	7.062339e-65
MsaG017644	MsaG005167	0.884738	3.189507e-71	7.210790e-68
MsaG017644	MsaG001893	0.884355	4.419810e-71	9.810628e-68
MsaG017644	MsaG002617	0.805805	1.891863e-49	2.922481e-47
MsaG017644	MsaG011183	0.814375	2.747402e-51	5.228146e-49
MsaG017644	MsaG009513	0.815940	1.238820e-51	2.452504e-49
MsaG017644	MsaG006148	0.879830	1.907819e-69	3.416015e-66
MsaG017644	MsaG013546	0.800019	2.929832e-48	3.963099e-46
MsaG017644	MsaG014164	0.816479	9.401907e-52	1.886964e-49
MsaG017644	MsaG012344	0.861262	2.290582e-63	1.868543e-60
MsaG017644	MsaG013496	0.882812	1.623797e-70	3.346361e-67
MsaG017644	MsaG012993	0.843678	2.257040e-58	9.905134e-56
MsaG017644	MsaG022734	0.825064	1.019414e-53	2.568920e-51
MsaG017644	MsaG019458	0.853057	5.902755e-61	3.558671e-58
MsaG017644	MsaG023445	0.808419	5.322450e-50	8.749304e-48
MsaG017644	MsaG022046	0.869112	8.009474e-66	8.942893e-63
MsaG017644	MsaG023179	0.832344	1.803801e-55	5.586056e-53
MsaG017644	MsaG020399	0.834085	6.677117e-56	2.176101e-53
MsaG017644	MsaG018912	0.867311	3.026265e-65	3.138319e-62
MsaG017644	MsaG020128	0.856025	8.241852e-62	5.526078e-59
MsaG017644	MsaG022828	0.822900	3.262646e-53	7.752000e-51
MsaG017644	MsaG019847	0.908931	2.395333e-81	2.113363e-77
MsaG017644	MsaG017938	0.837641	8.460303e-57	3.068889e-54
MsaG017644	MsaG025092	0.834783	4.469803e-56	1.487532e-53
MsaG017644	MsaG028734	0.835575	2.827613e-56	9.635601e-54
MsaG017644	MsaG029155	0.858056	2.088774e-62	1.509361e-59
MsaG017644	MsaG029390	0.849871	4.657321e-60	2.512833e-57
MsaG017644	MsaG026803	0.873457	2.983679e-67	4.009556e-64
MsaG017644	MsaG027199	0.818616	3.117655e-52	6.611799e-50
MsaG017644	MsaG027575	0.807548	8.142802e-50	1.310794e-47
MsaG017644	MsaG026407	0.888460	1.264569e-72	3.441656e-69
MsaG017644	MsaG028079	0.924746	1.228369e-89	3.304015e-85
MsaG017644	MsaG033602	0.935613	1.827685e-96	1.182538e-91
MsaG017644	MsaG031012	0.865208	1.394595e-64	1.328714e-61
MsaG017644	MsaG031186	0.802205	1.051754e-48	1.494830e-46
MsaG017644	MsaG033836	0.818423	3.445481e-52	7.270455e-50
MsaG017644	MsaG031635	0.877753	1.020947e-68	1.661445e-65
MsaG017644	MsaG034655	0.880281	1.319572e-69	2.412591e-66
MsaG017644	MsaG033082	0.868804	1.006981e-65	1.110149e-62
MsaG017644	MsaG032525	0.846678	3.519609e-59	1.704923e-56
MsaG017644	MsaG031503	0.833063	1.198380e-55	3.789972e-53
MsaG017644	MsaG033319	0.864206	2.861623e-64	2.619428e-61
MsaG017644	MsaG032799	0.831297	3.260378e-55	9.793293e-53
MsaG017644	MsaG031246	0.887857	2.150520e-72	5.678332e-69
MsaG017644	MsaG031638	0.871288	1.564411e-66	1.914637e-63
MsaG017644	MsaG032718	0.856714	5.188333e-62	3.567610e-59
MsaG017644	MsaG031847	0.882440	2.215904e-70	4.484979e-67
MsaG017644	MsaG033778	0.876721	2.323601e-68	3.608279e-65
MsaG017644	MsaG033259	0.871174	1.705325e-66	2.076928e-63
MsaG017644	MsaG038885	0.852999	6.129411e-61	3.688037e-58
MsaG017644	MsaG036286	0.910321	5.167636e-82	4.984011e-78
MsaG017644	MsaG036043	0.876056	3.930144e-68	5.924122e-65
MsaG017644	MsaG037374	0.844178	1.660489e-58	7.406028e-56
MsaG017644	MsaG036672	0.836147	2.027800e-56	7.030219e-54
MsaG017644	MsaG035600	0.887857	2.149838e-72	5.676626e-69
MsaG017644	MsaG036233	0.835947	2.278278e-56	7.850989e-54
MsaG017644	MsaG036866	0.816933	7.443012e-52	1.511454e-49
MsaG017644	MsaG037531	0.871936	9.567035e-67	1.203965e-63
MsaG017644	MsaG037725	0.852469	8.672394e-61	5.121105e-58
MsaG017644	MsaG036685	0.837633	8.502445e-57	3.083324e-54
MsaG017644	MsaG039797	0.888031	1.845591e-72	4.915957e-69
MsaG017644	MsaG035545	0.832734	1.445448e-55	4.527597e-53
MsaG017644	MsaG035418	0.819237	2.255640e-52	4.862240e-50
MsaG017644	MsaG036758	0.940607	5.158580e-100	5.069056e-95
MsaG017644	MsaG037508	0.875329	6.958022e-68	1.015151e-64
MsaG017644	MsaG041442	0.954113	2.053801e-111	6.483525e-106
MsaG017644	MsaG044977	0.906548	3.131198e-80	2.371820e-76
MsaG017644	MsaG044531	0.856273	6.980032e-62	4.723088e-59
MsaG017644	MsaG042876	0.803517	5.652760e-49	8.280362e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017644	MtrunA17_Chr3g0142871	97.706	654	14	1	1	654	1	653	0.0	1310
MsaG017644	MtrunA17_Chr7g0269901	97.095	654	18	1	1	654	1	653	0.0	1306
MsaG017644	MtrunA17_Chr3g0142891	83.712	264	35	2	393	654	1	258	5.20e-145	421
MsaG017644	MtrunA17_Chr8g0383991	29.439	214	95	3	443	653	140	300	8.01e-21	93.6
MsaG017644	MtrunA17_Chr4g0061421	30.417	240	115	9	98	300	9	233	2.30e-17	86.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017644	AT3G11450.1	63.939	660	210	11	4	654	7	647	0.0	734
MsaG017644	AT5G06110.1	59.492	669	239	10	2	651	5	660	0.0	713
MsaG017644	AT5G06110.2	59.492	669	239	10	2	651	5	660	0.0	713
MsaG017644	AT5G45420.2	31.959	194	87	3	459	652	158	306	7.81e-19	88.2
MsaG017644	AT5G45420.1	31.959	194	87	3	459	652	158	306	7.81e-19	88.2
MsaG017644	AT5G45420.3	31.959	194	87	3	459	652	158	306	7.81e-19	88.2
MsaG017644	AT1G74250.1	29.167	240	117	6	98	297	12	238	4.85e-16	82.4

Find 130 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAACTTCTTTGCCATATATT+TGG	0.137476	3:+111523133	None:intergenic
TTTCTCCTCTTCAGCAATTC+TGG	0.180978	3:+111523094	None:intergenic
GCAAGATCATTATGCATTAT+TGG	0.181634	3:-111523786	MsaT017644.1:CDS
TCCTTTCTTCTCAGTATTCT+AGG	0.194363	3:+111523191	None:intergenic
CCATGATGAAGGAAAATTTC+AGG	0.207011	3:-111522149	MsaT017644.1:CDS
CCATCTCCTTGAAGTTCCTT+TGG	0.238251	3:+111522641	None:intergenic
CTTTGGCTGTATCGGGCTTC+TGG	0.244533	3:+111522544	None:intergenic
CATCTCTGGTTAGCTTCCTT+TGG	0.256785	3:+111522231	None:intergenic
CAAGATCATTATGCATTATT+GGG	0.286954	3:-111523785	MsaT017644.1:CDS
GTCTAATTGTCTTCCGGTTA+AGG	0.294533	3:-111523996	MsaT017644.1:CDS
AGCTGAGAAGAAAAGGAAAA+AGG	0.327832	3:-111523159	MsaT017644.1:CDS
ATTGTCAACTAGAGAAGAAT+TGG	0.337451	3:-111522466	MsaT017644.1:CDS
TCATATTTCAACGCCTTAAC+CGG	0.338185	3:+111523983	None:intergenic
GAGAAAAGTAATCAACAAAA+TGG	0.344685	3:-111522777	MsaT017644.1:CDS
CATCTCCTTGAAGTTCCTTT+GGG	0.350239	3:+111522642	None:intergenic
CTGAATCCCGAGATCATAAA+AGG	0.353541	3:-111523310	MsaT017644.1:CDS
ATCTCTGGTTAGCTTCCTTT+GGG	0.356444	3:+111522232	None:intergenic
CGAGTAGCTGCAGCTGTACC+TGG	0.359607	3:-111522204	MsaT017644.1:CDS
TACTCACAAGAGCTTGTAGA+TGG	0.365954	3:-111524037	MsaT017644.1:CDS
AATGGCTATGTCAAGGCTAA+TGG	0.383665	3:-111522759	MsaT017644.1:CDS
TGTTTCGTCTAATTGTCTTC+CGG	0.396355	3:-111524002	MsaT017644.1:CDS
CTTCTGTTGCAAAGCAGCTT+CGG	0.407096	3:+111523040	None:intergenic
CAGCTACTCGTTCCCATCTC+TGG	0.408539	3:+111522217	None:intergenic
AGGCAAAAGCTGAGAAGAAA+AGG	0.413153	3:-111523166	MsaT017644.1:CDS
TTGTTGATAATGCTTATAAG+AGG	0.415278	3:-111523217	MsaT017644.1:CDS
AGCAAGAGCAAGAAGAAATC+TGG	0.416590	3:-111523827	MsaT017644.1:CDS
ATTCTTCTCTAGTTGACAAT+GGG	0.419152	3:+111522469	None:intergenic
TCATCACCTAGAGATGGAAT+TGG	0.419175	3:+111523434	None:intergenic
CCTTTCTTCTCAGTATTCTA+GGG	0.419637	3:+111523192	None:intergenic
GAAGAATGTGGTTGAAGATA+AGG	0.419917	3:-111523882	MsaT017644.1:CDS
CTGCTTGTTGCTGTCGGTAC+CGG	0.420172	3:+111522345	None:intergenic
TCAAAAGCTTTGGCTGTATC+GGG	0.425452	3:+111522537	None:intergenic
CAAGACTTCTACAAGGTGTT+TGG	0.427058	3:-111523497	MsaT017644.1:CDS
GCTGCTGCACTTAAACTTCT+CGG	0.428929	3:-111523938	MsaT017644.1:CDS
TGATGATAAGTCTTCAATAA+AGG	0.429949	3:-111523417	MsaT017644.1:CDS
AACTTCCTTGAGGTTTCATC+CGG	0.430850	3:-111523705	MsaT017644.1:CDS
TTTGGTATTCCTTTAAAAGC+TGG	0.431430	3:-111523373	MsaT017644.1:CDS
GAGGTTTCATCCGGACAAAC+AGG	0.431529	3:-111523696	MsaT017644.1:CDS
GAGATTGAGCTATTGAGAAA+AGG	0.438019	3:-111522678	MsaT017644.1:CDS
ATCAAAAGCTTTGGCTGTAT+CGG	0.439665	3:+111522536	None:intergenic
CAAATATATGGCAAAGAAGT+TGG	0.442593	3:-111523132	MsaT017644.1:CDS
AAGAAATGTATCAAAAGCTT+TGG	0.451091	3:+111522527	None:intergenic
ATTTGATATCGAACAATTGA+GGG	0.453929	3:-111522889	MsaT017644.1:CDS
CATTTGATATCGAACAATTG+AGG	0.454216	3:-111522890	MsaT017644.1:CDS
CCAAAGGAACTTCAAGGAGA+TGG	0.456430	3:-111522641	MsaT017644.1:CDS
CTTCGCAGCTTCAGTTTGCT+CGG	0.456856	3:+111523658	None:intergenic
CCAACACTGCATAAGCCTCT+TGG	0.462398	3:+111523594	None:intergenic
GATGCAATTGATTGTGCTGC+AGG	0.463598	3:+111522492	None:intergenic
ACAGCAGCAGCCTGTTTGTC+CGG	0.463811	3:+111523686	None:intergenic
CAAGATCAAACTCATCAGCC+TGG	0.467623	3:+111523339	None:intergenic
AGAGGCGTGGTCTGCAGTGC+AGG	0.469414	3:-111522286	MsaT017644.1:CDS
CTGGTTAGCTTCCTTTGGGA+AGG	0.471179	3:+111522236	None:intergenic
GTCGTCGTCATCGTCGGTGT+TGG	0.475726	3:+111522381	None:intergenic
CAAAGGAAGCTAACCAGAGA+TGG	0.482494	3:-111522230	MsaT017644.1:CDS
ATTGTTGTCGTCGTCATCGT+CGG	0.494599	3:+111522375	None:intergenic
TTGATACATTTCTTGAGAAG+AGG	0.495249	3:-111522518	MsaT017644.1:CDS
AGCTGCTTTGCAACAGAAGA+AGG	0.496514	3:-111523036	MsaT017644.1:CDS
CACTGGATCACGGTCTTCCC+AGG	0.497559	3:+111522186	None:intergenic
TCAATCTCTTCTTTAGTCCA+AGG	0.508908	3:+111522693	None:intergenic
AGCAGGCTACACAGAGAAGA+AGG	0.509420	3:-111522721	MsaT017644.1:CDS
CAGAGAAGAAGGAGAAACCT+TGG	0.509658	3:-111522710	MsaT017644.1:CDS
AAGATCAAACTCATCAGCCT+GGG	0.518267	3:+111523340	None:intergenic
AATTCTTCTCTAGTTGACAA+TGG	0.519138	3:+111522468	None:intergenic
CCCTAGAATACTGAGAAGAA+AGG	0.521673	3:-111523192	MsaT017644.1:CDS
CCGTAGCAAGATATCTAAGA+TGG	0.529700	3:+111523756	None:intergenic
CAAAGGAACTTCAAGGAGAT+GGG	0.529793	3:-111522640	MsaT017644.1:CDS
GTTGCTGTCGGTACCGGTGT+TGG	0.530623	3:+111522351	None:intergenic
GTTTCAGAATACATTGGCAC+TGG	0.531471	3:-111522612	MsaT017644.1:CDS
AATCAACCAATTCCATCTCT+AGG	0.533477	3:-111523440	MsaT017644.1:CDS
GCATGAAAAGAGTGACCAGC+CGG	0.535447	3:+111523959	None:intergenic
GGAAGCAGTAGTTCTCTAGC+AGG	0.540499	3:-111522738	MsaT017644.1:CDS
AGCGGCCAGAATTGCTGAAG+AGG	0.545593	3:-111523099	MsaT017644.1:CDS
ATCATAAAAGGTGGATGGAA+AGG	0.545814	3:-111523298	MsaT017644.1:CDS
TATGGCAAAGAAGTTGGAGG+AGG	0.545831	3:-111523126	MsaT017644.1:CDS
AGTTTCCCAAAGGAACTTCA+AGG	0.546208	3:-111522647	MsaT017644.1:CDS
CGAGCAAACTGAAGCTGCGA+AGG	0.546255	3:-111523657	MsaT017644.1:CDS
CCGAGATCATAAAAGGTGGA+TGG	0.548047	3:-111523303	MsaT017644.1:CDS
TTGATGCTGCTTGTTGCTGT+CGG	0.552607	3:+111522339	None:intergenic
CCAAGAGGCTTATGCAGTGT+TGG	0.555210	3:-111523594	MsaT017644.1:CDS
GCAAACTGAAGCTGCGAAGG+AGG	0.560752	3:-111523654	MsaT017644.1:CDS
AATACTGAGAAGAAAGGAAG+AGG	0.562192	3:-111523186	MsaT017644.1:CDS
CGTCCATTCCTCATAAAAGC+AGG	0.567375	3:+111523473	None:intergenic
TGGCTGTATCGGGCTTCTGG+AGG	0.570452	3:+111522547	None:intergenic
GACTTATCATCACCTAGAGA+TGG	0.570557	3:+111523428	None:intergenic
TATGAGGAATGGACGGTGGT+CGG	0.570845	3:-111523465	MsaT017644.1:CDS
CAACTAGAGAAGAATTGGAA+GGG	0.572911	3:-111522461	MsaT017644.1:CDS
AACACCTTGTAGAAGTCTTG+TGG	0.578361	3:+111523500	None:intergenic
ATCGGGCTTCTGGAGGAGAA+CGG	0.578804	3:+111522554	None:intergenic
TGTTGATAATGCTTATAAGA+GGG	0.580470	3:-111523216	MsaT017644.1:CDS
GAGGTTGTTTCAGAATACAT+TGG	0.584103	3:-111522618	MsaT017644.1:CDS
GGAGAAACAACGAAAAGCAG+AGG	0.585652	3:-111523078	MsaT017644.1:CDS
GAAGTTGGAGGAGGAAGAAG+CGG	0.588565	3:-111523117	MsaT017644.1:CDS
ATATATGGCAAAGAAGTTGG+AGG	0.590878	3:-111523129	MsaT017644.1:CDS
AAAGGAAGCTAACCAGAGAT+GGG	0.594916	3:-111522229	MsaT017644.1:CDS
AGCAACAAGCAGCATCAACT+CGG	0.597280	3:-111522334	MsaT017644.1:CDS
CCATCTTAGATATCTTGCTA+CGG	0.601973	3:-111523756	MsaT017644.1:CDS
AGCAAGAAGAAATCTGGTGA+CGG	0.602442	3:-111523821	MsaT017644.1:CDS
GAGTAGCTGCAGCTGTACCT+GGG	0.604010	3:-111522203	MsaT017644.1:CDS
AGTATGTGTTGTGACAAGAT+AGG	0.605889	3:+111522951	None:intergenic
TCAACAAAATGGCTATGTCA+AGG	0.605950	3:-111522766	MsaT017644.1:CDS
TCAACTAGAGAAGAATTGGA+AGG	0.608211	3:-111522462	MsaT017644.1:CDS
AACTAGAGAAGAATTGGAAG+GGG	0.608691	3:-111522460	MsaT017644.1:CDS
ACAGAAGAAGGTGAAAGAGA+AGG	0.608855	3:-111523024	MsaT017644.1:CDS
TCAAGGAGTTTCAGAACAAG+AGG	0.609387	3:-111522304	MsaT017644.1:CDS
GCTATCATAAAACTTCCTTG+AGG	0.611239	3:-111523715	MsaT017644.1:CDS
ACTCACAAGAGCTTGTAGAT+GGG	0.613229	3:-111524036	MsaT017644.1:CDS
CATGAAAAGAGTGACCAGCC+GGG	0.617908	3:+111523960	None:intergenic
CTTGTGAGTAAGTAATAAGA+CGG	0.621140	3:+111524050	None:intergenic
GTCTTGTGGATCACAGTCAG+TGG	0.627262	3:+111523514	None:intergenic
GGAATACAAAAGTTTCCCAA+AGG	0.628434	3:-111522657	MsaT017644.1:CDS
TCTTGTGGATCACAGTCAGT+GGG	0.629359	3:+111523515	None:intergenic
TAAGGCGTTGAAATATGACC+CGG	0.631520	3:-111523978	MsaT017644.1:CDS
ATCAACTCGGAAGACTCTCA+AGG	0.633952	3:-111522321	MsaT017644.1:CDS
AAGCTGGAGAGAGTTTCCCC+AGG	0.640812	3:-111523357	MsaT017644.1:CDS
TTTGTCCGGATGAAACCTCA+AGG	0.646808	3:+111523700	None:intergenic
TTTGATATCGAACAATTGAG+GGG	0.649974	3:-111522888	MsaT017644.1:CDS
GACGACAACAATTCCAACAC+CGG	0.650077	3:-111522364	MsaT017644.1:CDS
TCTTAGATATCTTGCTACGG+AGG	0.651757	3:-111523753	MsaT017644.1:CDS
TGATCCACAAGACTTCTACA+AGG	0.666734	3:-111523504	MsaT017644.1:CDS
AGATCAAACTCATCAGCCTG+GGG	0.670566	3:+111523341	None:intergenic
GGTTTGTGTGAGAAAATCGA+AGG	0.671097	3:-111522867	MsaT017644.1:CDS
GCGTTGAAATATGACCCGGC+TGG	0.672506	3:-111523974	MsaT017644.1:CDS
TGAGAAAATCGAAGGCAAAG+AGG	0.673494	3:-111522859	MsaT017644.1:CDS
AATCCCGAGATCATAAAAGG+TGG	0.674327	3:-111523307	MsaT017644.1:CDS
TTCTTCTCTAGTTGACAATG+GGG	0.676675	3:+111522470	None:intergenic
GAGTTTCAGAACAAGAGGCG+TGG	0.676797	3:-111522299	MsaT017644.1:CDS
TTGCTGCTGTAAGAATCAGA+AGG	0.678587	3:+111523845	None:intergenic
AAGCATTATCAACAAGAGTG+CGG	0.686922	3:+111523225	None:intergenic
AGGAACTTCAAGGAGATGGG+AGG	0.689319	3:-111522637	MsaT017644.1:CDS
AGATGCTGATAAGAAGAATG+TGG	0.708564	3:-111523894	MsaT017644.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	111522128	111524092	111522128	ID=MsaG017644
Chr3	mRNA	111522128	111524092	111522128	ID=MsaT017644.1;Parent=MsaG017644
Chr3	exon	111522128	111524092	111522128	ID=MsaT017644.1.exon1;Parent=MsaT017644.1
Chr3	CDS	111522128	111524092	111522128	ID=cds.MsaT017644.1;Parent=MsaT017644.1

Gene Sequence

>MsaT017644.1

ATGGCTGTTCAAACAAAATACCGTCTTATTACTTACTCACAAGAGCTTGTAGATGGGCAGCCTATTTTTGTTTCGTCTAATTGTCTTCCGGTTAAGGCGTTGAAATATGACCCGGCTGGTCACTCTTTTCATGCTGCTGCACTTAAACTTCTCGGTGTTACAAAAGAAGATAACAAAGATGCTGATAAGAAGAATGTGGTTGAAGATAAGGAACATGTTTATTTGCCTTCTGATTCTTACAGCAGCAAGAGCAAGAAGAAATCTGGTGACGGAGACAAGCAACAGCAAGATCATTATGCATTATTGGGTTTGAGCCATCTTAGATATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCATAAAACTTCCTTGAGGTTTCATCCGGACAAACAGGCTGCTGCTGTTCTTTCCGAGCAAACTGAAGCTGCGAAGGAGGCAAAGAAGATTGAAATAGATGTTCATTTTAAGGCAATCCAAGAGGCTTATGCAGTGTTGGTCGATCCCGTAAAAAGAAGAATTTATGATTCTACAGACGAGTTTGATGATGAGATTCCCACTGACTGTGATCCACAAGACTTCTACAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGACGGTGGTCGGTTAATCAACCAATTCCATCTCTAGGTGATGATAAGTCTTCAATAAAGGAAGTTGATAGTTTCTACAATTTTTGGTATTCCTTTAAAAGCTGGAGAGAGTTTCCCCAGGCTGATGAGTTTGATCTTGAGCAAGCTGAATCCCGAGATCATAAAAGGTGGATGGAAAGGCAAAATGCAAAACTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGTATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATACTGAGAAGAAAGGAAGAGGCAAAAGCTGAGAAGAAAAGGAAAAAGGAGTCCAAATATATGGCAAAGAAGTTGGAGGAGGAAGAAGCGGCCAGAATTGCTGAAGAGGAGAAACAACGAAAAGCAGAGGAAGATAAAAAAGCTGCCGAAGCTGCTTTGCAACAGAAGAAGGTGAAAGAGAAGGAGAAAAAGCTCTTGCGGAAGGAGCGAACACGTCTTCGAACTCTCTCAAGACCTATCTTGTCACAACACATACTTGATATTGCTGAAGACGATGTAGAAGAGCTTTGCATGTCATTTGATATCGAACAATTGAGGGGTTTGTGTGAGAAAATCGAAGGCAAAGAGGTGTTAGAGCAAGCAGAAGCTCTAAAAGATGCACTGAGTTGCAAGAAAAACGTGGTTGATGAGAAAAGTAATCAACAAAATGGCTATGTCAAGGCTAATGGAAGCAGTAGTTCTCTAGCAGGCTACACAGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGAGCTATTGAGAAAAGGAATACAAAAGTTTCCCAAAGGAACTTCAAGGAGATGGGAGGTTGTTTCAGAATACATTGGCACTGGAAGATCTGTTGAAGAAATAATGAAAGCAACTAAAACCGTTCTCCTCCAGAAGCCCGATACAGCCAAAGCTTTTGATACATTTCTTGAGAAGAGGAAACCTGCAGCACAATCAATTGCATCCCCATTGTCAACTAGAGAAGAATTGGAAGGGGTCTCAATACCAGCAACAACAACTGAAAATAGTGATGCAAAAACAACAACTACTATACCAACACCGACGATGACGACGACAACAATTCCAACACCGGTACCGACAGCAACAAGCAGCATCAACTCGGAAGACTCTCAAGGAGTTTCAGAACAAGAGGCGTGGTCTGCAGTGCAGGAAAGAGCATTAGTTCAAGCTTTAAAAACCTTCCCAAAGGAAGCTAACCAGAGATGGGAACGAGTAGCTGCAGCTGTACCTGGGAAGACCGTGATCCAGTGCAAGAAAAAATTTGCCATGATGAAGGAAAATTTCAGGAACAAGAAAACTGCAGTTTGA

Protein sequence

>MsaT017644.1

MAVQTKYRLITYSQELVDGQPIFVSSNCLPVKALKYDPAGHSFHAAALKLLGVTKEDNKDADKKNVVEDKEHVYLPSDSYSSKSKKKSGDGDKQQQDHYALLGLSHLRYLATEDQIRKSYHKTSLRFHPDKQAAAVLSEQTEAAKEAKKIEIDVHFKAIQEAYAVLVDPVKRRIYDSTDEFDDEIPTDCDPQDFYKVFGPAFMRNGRWSVNQPIPSLGDDKSSIKEVDSFYNFWYSFKSWREFPQADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEAKAEKKRKKESKYMAKKLEEEEAARIAEEEKQRKAEEDKKAAEAALQQKKVKEKEKKLLRKERTRLRTLSRPILSQHILDIAEDDVEELCMSFDIEQLRGLCEKIEGKEVLEQAEALKDALSCKKNVVDEKSNQQNGYVKANGSSSSLAGYTEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLLQKPDTAKAFDTFLEKRKPAAQSIASPLSTREELEGVSIPATTTENSDAKTTTTIPTPTMTTTTIPTPVPTATSSINSEDSQGVSEQEAWSAVQERALVQALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAMMKENFRNKKTAV*