AlfalfaGEDB | MsaG017804

M. sativa ssp. caerulea / MsaG017804

KEGG: -
GO: -
PFAM: PF00643.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017804	ADD09572.1	84.912	285	33	5	1	277	1	283	6.98e-156	446

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017804	sp\|Q9LQZ7\|BBX21_ARATH	49.083	218	99	4	1	206	1	218	1.85e-59	195

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017804	tr\|D3YBC1\|D3YBC1_TRIRP	84.912	285	33	5	1	277	1	283	3.33e-156	446

TFs/TRs:

Gene ID	Type	Classification
MsaG017804	TF	DBB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000213	MsaG017804	0.840998	1.148775e-57	4.627399e-55
MsaG000151	MsaG017804	0.803567	5.519241e-49	8.094103e-47
MsaG000163	MsaG017804	0.819095	2.429614e-52	5.217796e-50
MsaG000321	MsaG017804	0.818973	2.589002e-52	5.542284e-50
MsaG000730	MsaG017804	0.845498	7.344770e-59	3.420984e-56
MsaG000733	MsaG017804	0.817550	5.415204e-52	1.117258e-49
MsaG001004	MsaG017804	0.860466	3.985170e-63	3.154554e-60
MsaG001196	MsaG017804	0.803162	6.690070e-49	9.719795e-47
MsaG001273	MsaG017804	0.809373	3.334667e-50	5.609029e-48
MsaG001323	MsaG017804	0.823628	2.209937e-53	5.355515e-51
MsaG001765	MsaG017804	0.814387	2.730734e-51	5.198014e-49
MsaG001973	MsaG017804	0.844654	1.237957e-58	5.608655e-56
MsaG002052	MsaG017804	0.803240	6.447330e-49	9.384006e-47
MsaG002526	MsaG017804	0.855507	1.165689e-61	7.670724e-59
MsaG002555	MsaG017804	0.826108	5.781806e-54	1.499749e-51
MsaG002560	MsaG017804	0.821770	5.952919e-53	1.372064e-50
MsaG002735	MsaG017804	0.803621	5.380970e-49	7.901028e-47
MsaG003072	MsaG017804	0.839000	3.790699e-57	1.434294e-54
MsaG003088	MsaG017804	0.828331	1.707077e-54	4.711805e-52
MsaG003090	MsaG017804	0.870005	4.112501e-66	4.767164e-63
MsaG003100	MsaG017804	0.803561	5.536158e-49	8.117794e-47
MsaG003269	MsaG017804	0.842264	5.345556e-58	2.241725e-55
MsaG003399	MsaG017804	0.844864	1.087572e-58	4.961642e-56
MsaG003381	MsaG017804	0.845858	5.870972e-59	2.767346e-56
MsaG003520	MsaG017804	0.834737	4.587751e-56	1.524788e-53
MsaG003560	MsaG017804	0.800990	1.861549e-48	2.573807e-46
MsaG003632	MsaG017804	0.814381	2.739584e-51	5.214024e-49
MsaG003679	MsaG017804	0.834730	4.608069e-56	1.531193e-53
MsaG003828	MsaG017804	0.802753	8.119212e-49	1.168542e-46
MsaG003999	MsaG017804	0.814100	3.158388e-51	5.968789e-49
MsaG003891	MsaG017804	0.807617	7.873674e-50	1.269570e-47
MsaG003972	MsaG017804	0.807977	6.606308e-50	1.074503e-47
MsaG003975	MsaG017804	0.809764	2.750370e-50	4.670256e-48
MsaG004152	MsaG017804	0.818086	4.104187e-52	8.585314e-50
MsaG004153	MsaG017804	0.812598	6.726529e-51	1.224319e-48
MsaG004340	MsaG017804	0.803927	4.650554e-49	6.877304e-47
MsaG004426	MsaG017804	0.841767	7.226627e-58	2.982870e-55
MsaG004463	MsaG017804	0.809644	2.917919e-50	4.940370e-48
MsaG004486	MsaG017804	0.843981	1.873663e-58	8.302028e-56
MsaG004591	MsaG017804	0.820100	1.436447e-52	3.167710e-50
MsaG004824	MsaG017804	0.810339	2.071319e-50	3.566676e-48
MsaG004923	MsaG017804	0.806468	1.374216e-49	2.156494e-47
MsaG005331	MsaG017804	0.811570	1.124129e-50	1.994806e-48
MsaG005447	MsaG017804	0.812064	8.789938e-51	1.578750e-48
MsaG005591	MsaG017804	0.846421	4.131411e-59	1.984147e-56
MsaG005761	MsaG017804	0.815303	1.714712e-51	3.340246e-49
MsaG005875	MsaG017804	0.817673	5.082726e-52	1.051938e-49
MsaG005880	MsaG017804	0.812224	8.110461e-51	1.462518e-48
MsaG006150	MsaG017804	0.808496	5.127329e-50	8.444210e-48
MsaG006160	MsaG017804	0.854284	2.629345e-61	1.655974e-58
MsaG006174	MsaG017804	0.807915	6.810005e-50	1.106000e-47
MsaG006217	MsaG017804	0.803926	4.653384e-49	6.881300e-47
MsaG006233	MsaG017804	0.809311	3.438871e-50	5.775364e-48
MsaG006250	MsaG017804	0.828426	1.619325e-54	4.481757e-52
MsaG006256	MsaG017804	0.817885	4.554747e-52	9.478700e-50
MsaG006257	MsaG017804	0.801462	1.492357e-48	2.085494e-46
MsaG006338	MsaG017804	0.860865	3.020977e-63	2.427428e-60
MsaG006407	MsaG017804	0.834820	4.374799e-56	1.457563e-53
MsaG006480	MsaG017804	0.829624	8.329016e-55	2.384731e-52
MsaG006510	MsaG017804	0.802618	8.656114e-49	1.241986e-46
MsaG006669	MsaG017804	0.802742	8.163490e-49	1.174600e-46
MsaG006679	MsaG017804	0.813714	3.837985e-51	7.183163e-49
MsaG006681	MsaG017804	0.831487	2.928801e-55	8.846758e-53
MsaG006691	MsaG017804	0.806360	1.448033e-49	2.266434e-47
MsaG006752	MsaG017804	0.833234	1.086948e-55	3.455117e-53
MsaG006757	MsaG017804	0.828722	1.374965e-54	3.836798e-52
MsaG006857	MsaG017804	0.824998	1.056177e-53	2.656688e-51
MsaG006841	MsaG017804	0.827470	2.743963e-54	7.392802e-52
MsaG006893	MsaG017804	0.809350	3.372578e-50	5.669467e-48
MsaG006891	MsaG017804	0.834657	4.805587e-56	1.593328e-53
MsaG006944	MsaG017804	0.815013	1.987435e-51	3.843204e-49
MsaG007334	MsaG017804	0.849305	6.688425e-60	3.540067e-57
MsaG007551	MsaG017804	0.808954	4.096480e-50	6.821466e-48
MsaG007658	MsaG017804	0.802594	8.753297e-49	1.255255e-46
MsaG007847	MsaG017804	0.802752	8.125269e-49	1.169362e-46
MsaG007737	MsaG017804	0.816204	1.082109e-51	2.156689e-49
MsaG008110	MsaG017804	0.838059	6.615587e-57	2.430792e-54
MsaG008112	MsaG017804	0.830027	6.648737e-55	1.925771e-52
MsaG008223	MsaG017804	0.858894	1.178136e-62	8.784102e-60
MsaG008288	MsaG017804	0.805911	1.797993e-49	2.784399e-47
MsaG008480	MsaG017804	0.817034	7.066330e-52	1.438706e-49
MsaG008428	MsaG017804	0.802375	9.707634e-49	1.385156e-46
MsaG008631	MsaG017804	0.845692	6.509998e-59	3.052042e-56
MsaG008704	MsaG017804	0.849529	5.795495e-60	3.091281e-57
MsaG009140	MsaG017804	0.833336	1.025334e-55	3.268805e-53
MsaG009530	MsaG017804	0.800239	2.645069e-48	3.595535e-46
MsaG009848	MsaG017804	0.840760	1.326179e-57	5.301780e-55
MsaG010051	MsaG017804	0.819593	1.873029e-52	4.075154e-50
MsaG010065	MsaG017804	0.811346	1.257251e-50	2.218772e-48
MsaG010090	MsaG017804	0.832322	1.826840e-55	5.653766e-53
MsaG010243	MsaG017804	0.840217	1.836384e-57	7.217510e-55
MsaG010245	MsaG017804	0.847761	1.780758e-59	8.946510e-57
MsaG010372	MsaG017804	0.802292	1.009563e-48	1.437770e-46
MsaG010448	MsaG017804	0.827186	3.206424e-54	8.570323e-52
MsaG010572	MsaG017804	0.816338	1.010615e-51	2.021079e-49
MsaG010816	MsaG017804	0.814486	2.597392e-51	4.956356e-49
MsaG010978	MsaG017804	0.824487	1.392297e-53	3.453635e-51
MsaG011177	MsaG017804	0.816021	1.188509e-51	2.357718e-49
MsaG011132	MsaG017804	0.829096	1.117117e-54	3.150414e-52
MsaG011144	MsaG017804	0.807503	8.321398e-50	1.338133e-47
MsaG011286	MsaG017804	0.804382	3.743817e-49	5.595136e-47
MsaG011386	MsaG017804	0.871769	1.086174e-66	1.356969e-63
MsaG011819	MsaG017804	0.818110	4.054486e-52	8.486747e-50
MsaG011881	MsaG017804	0.800776	2.058245e-48	2.832115e-46
MsaG012084	MsaG017804	0.846566	3.774810e-59	1.821713e-56
MsaG012339	MsaG017804	0.809631	2.937046e-50	4.971173e-48
MsaG012287	MsaG017804	0.804666	3.269284e-49	4.918026e-47
MsaG012594	MsaG017804	0.824097	1.717432e-53	4.215164e-51
MsaG012609	MsaG017804	0.811438	1.201007e-50	2.124272e-48
MsaG012575	MsaG017804	0.819855	1.633093e-52	3.577836e-50
MsaG012576	MsaG017804	0.824674	1.258985e-53	3.138819e-51
MsaG013059	MsaG017804	0.812067	8.773124e-51	1.575881e-48
MsaG013333	MsaG017804	0.854266	2.660656e-61	1.674632e-58
MsaG013534	MsaG017804	0.808176	5.993441e-50	9.795117e-48
MsaG013867	MsaG017804	0.859179	9.689328e-63	7.302145e-60
MsaG013878	MsaG017804	0.807682	7.627929e-50	1.231879e-47
MsaG014137	MsaG017804	0.836458	1.691354e-56	5.918926e-54
MsaG014193	MsaG017804	0.859648	7.015395e-63	5.381831e-60
MsaG014205	MsaG017804	0.856428	6.289439e-62	4.280034e-59
MsaG014543	MsaG017804	0.807444	8.562572e-50	1.374977e-47
MsaG014544	MsaG017804	0.801573	1.416447e-48	1.984401e-46
MsaG014555	MsaG017804	0.862591	9.006767e-64	7.736170e-61
MsaG015134	MsaG017804	0.859420	8.212341e-63	6.245873e-60
MsaG015145	MsaG017804	0.845408	7.763977e-59	3.605885e-56
MsaG015142	MsaG017804	0.831209	3.425890e-55	1.026413e-52
MsaG015317	MsaG017804	0.800520	2.319550e-48	3.173226e-46
MsaG015318	MsaG017804	0.803300	6.266253e-49	9.132993e-47
MsaG015333	MsaG017804	0.835046	3.839251e-56	1.287803e-53
MsaG015809	MsaG017804	0.828838	1.289107e-54	3.608980e-52
MsaG016247	MsaG017804	0.811307	1.281519e-50	2.259512e-48
MsaG016347	MsaG017804	0.848662	1.006893e-59	5.213958e-57
MsaG016655	MsaG017804	0.829900	7.140582e-55	2.060610e-52
MsaG016796	MsaG017804	0.835157	3.601571e-56	1.212045e-53
MsaG017170	MsaG017804	0.818727	2.942760e-52	6.258848e-50
MsaG017341	MsaG017804	0.871346	1.497224e-66	1.836948e-63
MsaG017446	MsaG017804	0.841291	9.632071e-58	3.916135e-55
MsaG017459	MsaG017804	0.827386	2.874095e-54	7.725393e-52
MsaG017460	MsaG017804	0.810068	2.367823e-50	4.050287e-48
MsaG017804	MsaG018056	0.808512	5.086673e-50	8.380492e-48
MsaG017804	MsaG018249	0.804572	3.418368e-49	5.131266e-47
MsaG017804	MsaG018282	0.810663	1.763999e-50	3.061482e-48
MsaG017804	MsaG018525	0.821688	6.216554e-53	1.429733e-50
MsaG017804	MsaG018608	0.836075	2.114706e-56	7.315396e-54
MsaG017804	MsaG018689	0.821187	8.102345e-53	1.838935e-50
MsaG017804	MsaG018843	0.802942	7.424156e-49	1.073167e-46
MsaG017804	MsaG018881	0.814007	3.310760e-51	6.242124e-49
MsaG017804	MsaG019403	0.823262	2.688861e-53	6.451565e-51
MsaG017804	MsaG020162	0.834506	5.241127e-56	1.729882e-53
MsaG017804	MsaG020287	0.813570	4.127850e-51	7.697945e-49
MsaG017804	MsaG020469	0.812981	5.549793e-51	1.019821e-48
MsaG017804	MsaG020497	0.825285	9.041647e-54	2.292305e-51
MsaG017804	MsaG020643	0.838231	5.977507e-57	2.207996e-54
MsaG017804	MsaG020684	0.831021	3.809596e-55	1.135223e-52
MsaG017804	MsaG020713	0.863316	5.394029e-64	4.766351e-61
MsaG017804	MsaG020754	0.827263	3.074336e-54	8.235160e-52
MsaG017804	MsaG020815	0.812421	7.350129e-51	1.331945e-48
MsaG017804	MsaG020838	0.852908	6.508251e-61	3.903088e-58
MsaG017804	MsaG020889	0.846148	4.900398e-59	2.332370e-56
MsaG017804	MsaG020933	0.858791	1.264420e-62	9.390505e-60
MsaG017804	MsaG021106	0.805735	1.957288e-49	3.018592e-47
MsaG017804	MsaG021410	0.808931	4.142208e-50	6.893856e-48
MsaG017804	MsaG022193	0.817815	4.721612e-52	9.808425e-50
MsaG017804	MsaG022936	0.814590	2.463463e-51	4.712989e-49
MsaG017804	MsaG023405	0.822102	4.990864e-53	1.160568e-50
MsaG017804	MsaG023614	0.820916	9.347334e-53	2.106299e-50
MsaG017804	MsaG023664	0.815718	1.387407e-51	2.731215e-49
MsaG017804	MsaG023674	0.824578	1.325634e-53	3.296364e-51
MsaG017804	MsaG023939	0.813748	3.773358e-51	7.068309e-49
MsaG017804	MsaG024049	0.824042	1.768935e-53	4.335249e-51
MsaG017804	MsaG024052	0.824663	1.265952e-53	3.155307e-51
MsaG017804	MsaG024303	0.816721	8.300562e-52	1.676350e-49
MsaG017804	MsaG024615	0.812310	7.770562e-51	1.404229e-48
MsaG017804	MsaG024573	0.844892	1.069123e-58	4.882312e-56
MsaG017804	MsaG024640	0.816843	7.798553e-52	1.579882e-49
MsaG017804	MsaG024665	0.839509	2.801919e-57	1.077032e-54
MsaG017804	MsaG025002	0.835772	2.521172e-56	8.642287e-54
MsaG017804	MsaG025282	0.805242	2.480701e-49	3.782076e-47
MsaG017804	MsaG025508	0.862135	1.242292e-63	1.048060e-60
MsaG017804	MsaG025714	0.804289	3.914254e-49	5.837392e-47
MsaG017804	MsaG026584	0.824891	1.119400e-53	2.807515e-51
MsaG017804	MsaG026763	0.802640	8.567704e-49	1.229927e-46
MsaG017804	MsaG027080	0.816505	9.273756e-52	1.862554e-49
MsaG017804	MsaG027138	0.813966	3.379986e-51	6.366200e-49
MsaG017804	MsaG027149	0.845725	6.376920e-59	2.992961e-56
MsaG017804	MsaG027171	0.804152	4.178012e-49	6.210942e-47
MsaG017804	MsaG027306	0.804235	4.015247e-49	5.980499e-47
MsaG017804	MsaG027514	0.806639	1.265548e-49	1.993900e-47
MsaG017804	MsaG027519	0.894246	6.617350e-75	2.447167e-71
MsaG017804	MsaG027648	0.817038	7.052401e-52	1.436007e-49
MsaG017804	MsaG027829	0.813092	5.250187e-51	9.674479e-49
MsaG017804	MsaG028135	0.844919	1.051256e-58	4.805326e-56
MsaG017804	MsaG028435	0.802455	9.350073e-49	1.336555e-46
MsaG017804	MsaG028568	0.802533	9.007973e-49	1.289995e-46
MsaG017804	MsaG028590	0.820959	9.138237e-53	2.061545e-50
MsaG017804	MsaG028683	0.835480	2.987676e-56	1.015255e-53
MsaG017804	MsaG028881	0.810884	1.580940e-50	2.758648e-48
MsaG017804	MsaG028935	0.811762	1.021737e-50	1.821633e-48
MsaG017804	MsaG029058	0.810785	1.661027e-50	2.891396e-48
MsaG017804	MsaG029231	0.812041	8.891476e-51	1.596135e-48
MsaG017804	MsaG029235	0.810729	1.707959e-50	2.968960e-48
MsaG017804	MsaG029370	0.833282	1.057624e-55	3.366409e-53
MsaG017804	MsaG029381	0.851871	1.280331e-60	7.403916e-58
MsaG017804	MsaG029512	0.824251	1.581412e-53	3.897459e-51
MsaG017804	MsaG029482	0.809196	3.638713e-50	6.094224e-48
MsaG017804	MsaG029732	0.804862	2.976390e-49	4.497971e-47
MsaG017804	MsaG029762	0.819905	1.590611e-52	3.489484e-50
MsaG017804	MsaG029846	0.816038	1.178187e-51	2.338219e-49
MsaG017804	MsaG029852	0.820585	1.113282e-52	2.486643e-50
MsaG017804	MsaG030086	0.804377	3.753242e-49	5.608560e-47
MsaG017804	MsaG030160	0.807181	9.730114e-50	1.552707e-47
MsaG017804	MsaG030987	0.805820	1.878281e-49	2.902567e-47
MsaG017804	MsaG031195	0.836987	1.241731e-56	4.415122e-54
MsaG017804	MsaG032775	0.823994	1.815718e-53	4.443831e-51
MsaG017804	MsaG033310	0.825087	1.006543e-53	2.538053e-51
MsaG017804	MsaG033687	0.831758	2.513044e-55	7.651909e-53
MsaG017804	MsaG033995	0.800961	1.887338e-48	2.607711e-46
MsaG017804	MsaG034028	0.800863	1.976272e-48	2.724575e-46
MsaG017804	MsaG034224	0.837423	9.618863e-57	3.466125e-54
MsaG017804	MsaG034308	0.802712	8.277732e-49	1.190226e-46
MsaG017804	MsaG034418	0.820405	1.223290e-52	2.719527e-50
MsaG017804	MsaG034426	0.842606	4.342904e-58	1.841499e-55
MsaG017804	MsaG035296	0.826729	4.119486e-54	1.087157e-51
MsaG017804	MsaG035393	0.821206	8.020677e-53	1.821290e-50
MsaG017804	MsaG035363	0.806901	1.114527e-49	1.766790e-47
MsaG017804	MsaG035414	0.806454	1.383601e-49	2.170479e-47
MsaG017804	MsaG035659	0.827825	2.256826e-54	6.141506e-52
MsaG017804	MsaG036045	0.818310	3.653467e-52	7.686751e-50
MsaG017804	MsaG036046	0.809407	3.279546e-50	5.520912e-48
MsaG017804	MsaG036055	0.821590	6.549067e-53	1.502236e-50
MsaG017804	MsaG038009	0.814512	2.563966e-51	4.895681e-49
MsaG017804	MsaG038354	0.818460	3.380861e-52	7.140866e-50
MsaG017804	MsaG038751	0.824938	1.091334e-53	2.740645e-51
MsaG017804	MsaG039179	0.804353	3.796466e-49	5.670088e-47
MsaG017804	MsaG040265	0.811378	1.237347e-50	2.185359e-48
MsaG017804	MsaG040578	0.801013	1.841609e-48	2.547569e-46
MsaG017804	MsaG040583	0.839039	3.705313e-57	1.403675e-54
MsaG017804	MsaG040676	0.831046	3.756523e-55	1.120220e-52
MsaG017804	MsaG041532	0.836555	1.598208e-56	5.609122e-54
MsaG017804	MsaG041790	0.869844	4.639157e-66	5.340738e-63
MsaG017804	MsaG041792	0.802891	7.608150e-49	1.098444e-46
MsaG017804	MsaG041930	0.820375	1.242843e-52	2.760813e-50
MsaG017804	MsaG041982	0.805267	2.451142e-49	3.739099e-47
MsaG017804	MsaG042068	0.817329	6.071763e-52	1.245601e-49
MsaG017804	MsaG042381	0.813745	3.779341e-51	7.078952e-49
MsaG017804	MsaG043809	0.808962	4.081109e-50	6.797059e-48
MsaG017804	MsaG043810	0.806070	1.665824e-49	2.589421e-47
MsaG017804	MsaG043881	0.821068	8.626916e-53	1.951805e-50
MsaG017804	MsaG044113	0.879291	2.956784e-69	5.165099e-66
MsaG017804	MsaG044120	0.857556	2.935196e-62	2.081798e-59
MsaG017804	MsaG044938	0.814553	2.510277e-51	4.798166e-49
MsaG017804	MsaG045263	0.839870	2.258533e-57	8.781315e-55
MsaG017804	MsaG045267	0.824689	1.248607e-53	3.114238e-51
MsaG017804	MsaG045485	0.819992	1.519807e-52	3.341970e-50
MsaG017804	MsaG045493	0.827865	2.207317e-54	6.013410e-52
MsaG017804	MsaG045590	0.802486	9.211371e-49	1.317672e-46
MsaG017804	MsaG045786	0.838659	4.639868e-57	1.736961e-54
MsaG017804	MsaG045870	0.846500	3.932843e-59	1.893847e-56
MsaG017804	MsaG045857	0.817845	4.649049e-52	9.664990e-50
MsaG017804	MsaG046321	0.822863	3.327257e-53	7.897802e-51
MsaG017804	MsaG046441	0.817313	6.121705e-52	1.255360e-49
MsaG017804	MsaG046445	0.815487	1.561237e-51	3.055353e-49
MsaG017804	MsaG046502	0.802605	8.708539e-49	1.249156e-46
MsaG017804	MsaG046670	0.830818	4.268809e-55	1.264669e-52
MsaG017804	MsaG046700	0.839083	3.608253e-57	1.368785e-54
MsaG017804	MsaG047018	0.838797	4.275773e-57	1.607560e-54
MsaG017804	MsaG047066	0.836951	1.268001e-56	4.503616e-54
MsaG017804	MsaG047137	0.861141	2.492207e-63	2.023637e-60
MsaG017804	MsaG001077	0.800984	1.867125e-48	2.581151e-46
MsaG017804	MsaG001346	0.856972	4.358016e-62	3.024623e-59
MsaG017804	MsaG001555	0.801720	1.321933e-48	1.858196e-46
MsaG017804	MsaG008905	0.838123	6.371016e-57	2.345508e-54
MsaG017804	MsaG010138	0.833705	8.303421e-56	2.676189e-53
MsaG017804	MsaG008209	0.816881	7.646348e-52	1.550604e-49
MsaG017804	MsaG007261	0.805208	2.521298e-49	3.840949e-47
MsaG017804	MsaG012667	0.805274	2.442967e-49	3.727256e-47
MsaG017804	MsaG012932	0.847183	2.563718e-59	1.263142e-56
MsaG017804	MsaG014896	0.805111	2.640716e-49	4.013840e-47
MsaG017804	MsaG018328	0.814698	2.332194e-51	4.474090e-49
MsaG017804	MsaG018567	0.811043	1.461407e-50	2.560005e-48
MsaG017804	MsaG022110	0.813430	4.427871e-51	8.228725e-49
MsaG017804	MsaG026802	0.810797	1.651020e-50	2.874803e-48
MsaG017804	MsaG028598	0.816256	1.053609e-51	2.102682e-49
MsaG017804	MsaG031743	0.805264	2.454402e-49	3.743839e-47
MsaG017804	MsaG033077	0.813892	3.508908e-51	6.596740e-49
MsaG017804	MsaG033379	0.837944	7.079424e-57	2.591974e-54
MsaG017804	MsaG034263	0.820405	1.223653e-52	2.720283e-50
MsaG017804	MsaG031967	0.810331	2.079184e-50	3.579559e-48
MsaG017804	MsaG032427	0.834657	4.805587e-56	1.593328e-53
MsaG017804	MsaG030748	0.814558	2.503780e-51	4.786324e-49
MsaG017804	MsaG033363	0.804234	4.017630e-49	5.983881e-47
MsaG017804	MsaG034539	0.806756	1.195545e-49	1.888834e-47
MsaG017804	MsaG033622	0.833293	1.050703e-55	3.345486e-53
MsaG017804	MsaG030699	0.850417	3.280118e-60	1.803292e-57
MsaG017804	MsaG032953	0.810216	2.200765e-50	3.778074e-48
MsaG017804	MsaG033067	0.832419	1.728897e-55	5.365765e-53
MsaG017804	MsaG035307	0.800889	1.951615e-48	2.692175e-46
MsaG017804	MsaG036522	0.841978	6.358386e-58	2.642442e-55
MsaG017804	MsaG036646	0.810999	1.493264e-50	2.612963e-48
MsaG017804	MsaG039380	0.810283	2.129293e-50	3.661402e-48
MsaG017804	MsaG037022	0.839534	2.760703e-57	1.062008e-54
MsaG017804	MsaG037555	0.817131	6.721702e-52	1.371970e-49
MsaG017804	MsaG035954	0.839644	2.585534e-57	9.980819e-55
MsaG017804	MsaG036287	0.803666	5.266075e-49	7.740544e-47
MsaG017804	MsaG035492	0.816698	8.400121e-52	1.695456e-49
MsaG017804	MsaG039594	0.879135	3.354758e-69	5.818794e-66
MsaG017804	MsaG034934	0.813238	4.879417e-51	9.024004e-49
MsaG017804	MsaG038282	0.804017	4.456107e-49	6.603619e-47
MsaG017804	MsaG045742	0.848357	1.222107e-59	6.262502e-57
MsaG017804	MsaG042294	0.818492	3.324086e-52	7.026890e-50
MsaG017804	MsaG043095	0.810195	2.224506e-50	3.816816e-48
MsaG017804	MsaG043528	0.813525	4.221915e-51	7.864558e-49
MsaG017804	MsaG046905	0.826924	3.701471e-54	9.821684e-52

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017804	MtrunA17_Chr3g0145061	94.907	216	9	1	1	214	1	216	2.27e-153	427
MsaG017804	MtrunA17_Chr4g0035651	54.667	225	87	5	1	218	1	217	7.56e-73	223
MsaG017804	MtrunA17_Chr3g0142221	50.746	201	53	4	1	198	1	158	2.03e-59	188
MsaG017804	MtrunA17_Chr1g0155811	49.254	201	91	3	1	201	1	190	1.12e-54	178
MsaG017804	MtrunA17_Chr2g0314671	55.738	122	53	1	1	122	1	121	1.31e-39	139
MsaG017804	MtrunA17_Chr4g0033641	49.206	126	60	3	1	125	1	123	1.64e-34	124
MsaG017804	MtrunA17_Chr2g0329511	52.294	109	51	1	1	109	1	108	4.06e-33	121
MsaG017804	MtrunA17_Chr5g0405151	36.429	140	79	3	1	134	1	136	2.12e-23	94.4
MsaG017804	MtrunA17_Chr1g0150471	40.206	97	48	1	5	101	6	92	1.94e-17	80.5
MsaG017804	MtrunA17_Chr3g0136701	37.113	97	51	1	5	101	6	92	8.43e-16	75.9
MsaG017804	MtrunA17_Chr4g0072871	39.785	93	46	1	5	97	22	104	1.25e-15	75.9
MsaG017804	MtrunA17_Chr7g0220721	36.559	93	49	1	5	97	26	108	2.11e-13	69.7
MsaG017804	MtrunA17_Chr5g0429341	30.769	195	103	8	1	176	1	182	3.25e-13	68.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG017804	AT1G75540.1	49.083	218	99	4	1	206	1	218	1.88e-60	195
MsaG017804	AT4G39070.1	55.000	200	74	5	1	184	1	200	1.52e-55	179
MsaG017804	AT1G06040.2	52.206	136	62	2	1	136	1	133	7.87e-40	137
MsaG017804	AT1G78600.1	54.237	118	53	1	1	118	1	117	1.12e-38	137
MsaG017804	AT1G06040.1	52.206	136	62	2	1	136	1	133	1.72e-38	135
MsaG017804	AT1G78600.2	54.237	118	53	1	1	118	1	117	1.92e-38	137
MsaG017804	AT4G10240.1	51.799	139	57	3	1	133	1	135	5.97e-38	131
MsaG017804	AT2G31380.1	48.092	131	67	1	1	131	1	130	2.36e-35	127
MsaG017804	AT4G38960.1	39.316	117	67	2	1	117	1	113	4.42e-23	93.6
MsaG017804	AT4G38960.6	39.316	117	67	2	1	117	1	113	4.42e-23	93.6
MsaG017804	AT2G21320.1	44.000	100	52	2	1	100	1	96	3.90e-22	90.9
MsaG017804	AT2G24790.2	39.785	93	46	1	5	97	8	90	6.12e-17	78.2
MsaG017804	AT2G24790.1	38.144	97	50	1	5	101	8	94	2.11e-16	77.8
MsaG017804	AT5G24930.1	36.082	97	52	1	5	101	6	92	1.46e-15	76.3
MsaG017804	AT4G38960.3	28.750	160	67	3	1	117	1	156	3.00e-15	73.6
MsaG017804	AT5G15850.1	32.787	122	71	2	5	125	12	123	3.04e-14	72.4
MsaG017804	AT3G02380.1	34.286	105	57	2	5	109	16	108	2.28e-13	69.7
MsaG017804	AT2G47890.2	35.593	118	55	3	5	111	13	120	2.81e-12	65.5
MsaG017804	AT5G15840.1	31.132	106	61	2	5	110	20	113	4.70e-12	65.9
MsaG017804	AT2G47890.3	41.176	85	40	2	5	89	13	87	5.06e-12	65.5
MsaG017804	AT1G28050.1	34.653	101	56	1	2	102	6	96	5.34e-12	65.9
MsaG017804	AT5G15840.2	31.132	106	61	2	5	110	20	113	5.61e-12	65.1
MsaG017804	AT2G47890.1	41.176	85	40	2	5	89	13	87	5.83e-12	65.5
MsaG017804	AT2G33500.2	33.000	100	57	1	3	102	10	99	8.72e-12	65.1
MsaG017804	AT2G33500.1	33.000	100	57	1	3	102	10	99	8.82e-12	65.1

Find 50 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTATGGCTGTACAGTTTC+AGG	0.212421	3:+113422292	MsaT017804.1:CDS
GATCTACTAGAGTAGTTTCT+TGG	0.265361	3:-113421509	None:intergenic
GAAGCTTTCAAGCAATTCTT+TGG	0.294858	3:+113421451	MsaT017804.1:CDS
ACTTCAAAATGGAAAGATTA+TGG	0.301261	3:+113422277	MsaT017804.1:CDS
GATGCTTCTTTCCCACCTAA+TGG	0.309132	3:+113421692	MsaT017804.1:CDS
CAAAAGTGAACACTTCAAAA+TGG	0.317889	3:+113422266	MsaT017804.1:CDS
ATAGAATCGCTCTATCTTCT+TGG	0.325288	3:-113421352	None:intergenic
CCCACCTAATGGTTTCTGTA+AGG	0.391077	3:+113421703	MsaT017804.1:CDS
TAAACCTTACAGAAACCATT+AGG	0.399460	3:-113421707	None:intergenic
ACTTGTTAACATGAATATCT+TGG	0.399770	3:-113422135	None:intergenic
TCTTGGTTCAGAGCCAATAC+TGG	0.403841	3:-113421492	None:intergenic
GCAGAAGCAGAATCATTATT+CGG	0.420688	3:+113422102	MsaT017804.1:intron
ATCACAAAGAGGGTAGTCTT+TGG	0.421009	3:-113421134	None:intergenic
ACCACTGAGCTAATATTAGA+AGG	0.428353	3:-113422226	None:intergenic
AACATACACAGAAACATAAC+AGG	0.440782	3:+113421411	MsaT017804.1:CDS
CATAACAGGTTTCTTCTCTC+TGG	0.447881	3:+113421425	MsaT017804.1:CDS
GTGTATGTTCATTTGCTCCA+TGG	0.455691	3:-113421397	None:intergenic
CATTTGCTCCATGGATTGGA+AGG	0.479724	3:-113421388	None:intergenic
ATACTGGTGGATGATGAATC+TGG	0.490828	3:-113421476	None:intergenic
GATTCATCATCCACCAGTAT+TGG	0.497576	3:+113421479	MsaT017804.1:CDS
AACGTGTGTACCTCTAGCTC+AGG	0.499247	3:+113422174	MsaT017804.1:CDS
TGTTCATTTGCTCCATGGAT+TGG	0.505507	3:-113421392	None:intergenic
GAATGTGACCTTCCAATCCA+TGG	0.511555	3:+113421380	MsaT017804.1:CDS
GAGGGTAGTCTTTGGAGTTG+AGG	0.523182	3:-113421126	None:intergenic
GATGAAGCTGCTCTTTGCCA+TGG	0.528890	3:+113421037	MsaT017804.1:CDS
GACAACATGGCTAGTGACAC+AGG	0.547231	3:+113421596	MsaT017804.1:CDS
TCTAATATTAGCTCAGTGGT+TGG	0.556823	3:+113422229	MsaT017804.1:CDS
AAATGCAAGTTCTTCTTGCA+TGG	0.564285	3:+113421568	MsaT017804.1:CDS
GAGCTAATATTAGAAGGAGT+AGG	0.569687	3:-113422220	None:intergenic
CTTTCTCACACACATCACAT+TGG	0.572968	3:-113420988	None:intergenic
GCTGATTCAGCCTGAGCTAG+AGG	0.574263	3:-113422184	None:intergenic
TGGTTCAGAGCCAATACTGG+TGG	0.580417	3:-113421489	None:intergenic
TGGTTGCAAGCTTGTTAGCA+CGG	0.587933	3:-113421078	None:intergenic
TTCATCTGAAGGACAGAACA+TGG	0.588007	3:-113421020	None:intergenic
AAGCTTGTTAGCACGGTGGA+TGG	0.588310	3:-113421071	None:intergenic
TACTTGATTGAAACAATACC+TGG	0.589710	3:+113421647	MsaT017804.1:CDS
GGTAGTCTTTGGAGTTGAGG+TGG	0.590439	3:-113421123	None:intergenic
ACCTTACAGAAACCATTAGG+TGG	0.591397	3:-113421704	None:intergenic
CAAAGAGCAGCTTCATCTGA+AGG	0.591587	3:-113421031	None:intergenic
GGATGGTATGATCACATCCA+TGG	0.613993	3:-113421054	None:intergenic
TACTGGTGGATGATGAATCT+GGG	0.618443	3:-113421475	None:intergenic
TTGCATGGCTGAAGACAACA+TGG	0.623591	3:+113421583	MsaT017804.1:CDS
CCTTACAGAAACCATTAGGT+GGG	0.623605	3:-113421703	None:intergenic
TCCTTCTAATATTAGCTCAG+TGG	0.624133	3:+113422225	MsaT017804.1:CDS
CTTGACAGATATCACAAAGA+GGG	0.634180	3:-113421144	None:intergenic
AAGTCTTCAAAACAGTAACC+AGG	0.647020	3:-113421665	None:intergenic
AGAGGTACACACGTTACTTG+AGG	0.647058	3:-113422166	None:intergenic
ACTTGACAGATATCACAAAG+AGG	0.665459	3:-113421145	None:intergenic
TTGCAAGCTTGTTAGCACGG+TGG	0.731754	3:-113421075	None:intergenic
TGATGTGTGTGAGAAAGCTG+AGG	0.739027	3:+113420994	MsaT017804.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	113420980	113422357	113420980	ID=MsaG017804
Chr3	mRNA	113420980	113422357	113420980	ID=MsaT017804.1;Parent=MsaG017804
Chr3	exon	113420980	113421165	113420980	ID=MsaT017804.1.exon1;Parent=MsaT017804.1
Chr3	CDS	113420980	113421165	113420980	ID=cds.MsaT017804.1;Parent=MsaT017804.1
Chr3	exon	113421329	113421724	113421329	ID=MsaT017804.1.exon2;Parent=MsaT017804.1
Chr3	CDS	113421329	113421724	113421329	ID=cds.MsaT017804.1;Parent=MsaT017804.1
Chr3	exon	113422106	113422357	113422106	ID=MsaT017804.1.exon3;Parent=MsaT017804.1
Chr3	CDS	113422106	113422357	113422106	ID=cds.MsaT017804.1;Parent=MsaT017804.1

Gene Sequence

>MsaT017804.1

ATGAAGATCCAATGTGATGTGTGTGAGAAAGCTGAGGCTTCCATGTTCTGTCCTTCAGATGAAGCTGCTCTTTGCCATGGATGTGATCATACCATCCACCGTGCTAACAAGCTTGCAACCAAACACACTCGTTTTTCTCTCGTCCACCTCAACTCCAAAGACTACCCTCTTTGTGATATCTGTCAAGAGAGGCGTGGATATCTATTTTGCCAAGAAGATAGAGCGATTCTATGCAGAGAATGTGACCTTCCAATCCATGGAGCAAATGAACATACACAGAAACATAACAGGTTTCTTCTCTCTGGTGTGAAGCTTTCAAGCAATTCTTTGGACCCAGATTCATCATCCACCAGTATTGGCTCTGAACCAAGAAACTACTCTAGTAGATCAAAAGCAAACATAATACCAAGATCAATTTCCAATGAAAATGCAAGTTCTTCTTGCATGGCTGAAGACAACATGGCTAGTGACACAGGTTCTGTTTCAACAAGCAGCATTTCTGAATACTTGATTGAAACAATACCTGGTTACTGTTTTGAAGACTTTCTTGATGCTTCTTTCCCACCTAATGGTTTCTGTAAGAAGCAGAATCATTATTCGGCATTTCAGTACCAAGATATTCATGTTAACAAGTTTTTATTTCCTCAAGTAACGTGTGTACCTCTAGCTCAGGCTGAATCAGCTCAACTAATTACTCCTACTCCTTCTAATATTAGCTCAGTGGTTGGAGTTAAAGAAATTTCAAAAGTGAACACTTCAAAATGGAAAGATTATGGCTGTACAGTTTCAGGAACTGATGCTGCATTCATAAAAAAATCTAGACACTTTCGATAA

Protein sequence

>MsaT017804.1

MKIQCDVCEKAEASMFCPSDEAALCHGCDHTIHRANKLATKHTRFSLVHLNSKDYPLCDICQERRGYLFCQEDRAILCRECDLPIHGANEHTQKHNRFLLSGVKLSSNSLDPDSSSTSIGSEPRNYSSRSKANIIPRSISNENASSSCMAEDNMASDTGSVSTSSISEYLIETIPGYCFEDFLDASFPPNGFCKKQNHYSAFQYQDIHVNKFLFPQVTCVPLAQAESAQLITPTPSNISSVVGVKEISKVNTSKWKDYGCTVSGTDAAFIKKSRHFR*