AlfalfaGEDB | MsaG019113

M. sativa ssp. caerulea / MsaG019113

KEGG: -
GO: GO:0000003 GO:0001708 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009888 GO:0009889 GO:0009908 GO:0009909 GO:0009933 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010093 GO:0010154 GO:0010158 GO:0010229 GO:0010450 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0090706 GO:0099402 GO:0140110 GO:1902183 GO:1903506 GO:1905392 GO:1905393 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
PFAM: PF04690.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG019113	XP_013455085.1	99.548	221	1	0	1	221	1	221	1.06e-164	463

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG019113	sp\|O22152\|YAB1_ARATH	67.431	218	49	6	19	221	19	229	1.43e-95	281

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG019113	tr\|A0A072UJ49\|A0A072UJ49_MEDTR	99.548	221	1	0	1	221	1	221	5.07e-165	463

TFs/TRs:

Gene ID	Type	Classification
MsaG019113	TF	C2C2-YABBY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000127	MsaG019113	0.830821	4.262256e-55	1.262819e-52
MsaG000128	MsaG019113	0.811127	1.401824e-50	2.460623e-48
MsaG000140	MsaG019113	0.809315	3.431205e-50	5.763066e-48
MsaG000198	MsaG019113	0.805332	2.375819e-49	3.629721e-47
MsaG000237	MsaG019113	0.827595	2.561312e-54	6.925245e-52
MsaG000530	MsaG019113	0.823042	3.024100e-53	7.212926e-51
MsaG000550	MsaG019113	0.810561	1.855482e-50	3.212282e-48
MsaG000641	MsaG019113	0.802466	9.301416e-49	1.329917e-46
MsaG000690	MsaG019113	0.844415	1.434848e-58	6.449263e-56
MsaG000856	MsaG019113	0.820607	1.100174e-52	2.458806e-50
MsaG001558	MsaG019113	0.800447	2.399799e-48	3.277662e-46
MsaG001809	MsaG019113	0.814024	3.281747e-51	6.190012e-49
MsaG001930	MsaG019113	0.872000	9.111350e-67	1.149704e-63
MsaG001991	MsaG019113	0.805285	2.429368e-49	3.707477e-47
MsaG002117	MsaG019113	0.821254	7.820902e-53	1.778173e-50
MsaG002184	MsaG019113	0.806367	1.443379e-49	2.259510e-47
MsaG002353	MsaG019113	0.812023	8.967680e-51	1.609133e-48
MsaG002732	MsaG019113	0.811408	1.218999e-50	2.154537e-48
MsaG003016	MsaG019113	0.825675	7.318272e-54	1.875499e-51
MsaG003181	MsaG019113	0.832478	1.671702e-55	5.197218e-53
MsaG003190	MsaG019113	0.804716	3.191451e-49	4.806564e-47
MsaG003472	MsaG019113	0.805603	2.085896e-49	3.206945e-47
MsaG003901	MsaG019113	0.832033	2.151865e-55	6.604606e-53
MsaG003906	MsaG019113	0.864350	2.582786e-64	2.377731e-61
MsaG003967	MsaG019113	0.821649	6.346690e-53	1.458156e-50
MsaG004017	MsaG019113	0.809696	2.845079e-50	4.822989e-48
MsaG004157	MsaG019113	0.811480	1.175982e-50	2.082210e-48
MsaG004544	MsaG019113	0.828924	1.228856e-54	3.448717e-52
MsaG004745	MsaG019113	0.843658	2.284661e-58	1.001988e-55
MsaG004801	MsaG019113	0.802344	9.852951e-49	1.404888e-46
MsaG004937	MsaG019113	0.848029	1.504270e-59	7.625801e-57
MsaG004939	MsaG019113	0.848688	9.901797e-60	5.131869e-57
MsaG004990	MsaG019113	0.817778	4.813859e-52	9.990264e-50
MsaG005120	MsaG019113	0.844300	1.540246e-58	6.897187e-56
MsaG005565	MsaG019113	0.833896	7.442723e-56	2.412071e-53
MsaG005646	MsaG019113	0.810812	1.638741e-50	2.854471e-48
MsaG006039	MsaG019113	0.868746	1.051255e-65	1.156148e-62
MsaG006120	MsaG019113	0.813287	4.759644e-51	8.813066e-49
MsaG006323	MsaG019113	0.828297	1.739844e-54	4.797492e-52
MsaG006423	MsaG019113	0.803173	6.654151e-49	9.670213e-47
MsaG006590	MsaG019113	0.825894	6.496295e-54	1.675115e-51
MsaG007071	MsaG019113	0.807085	1.019556e-49	1.623251e-47
MsaG007191	MsaG019113	0.826087	5.848547e-54	1.516195e-51
MsaG007434	MsaG019113	0.800285	2.588544e-48	3.522380e-46
MsaG007407	MsaG019113	0.826221	5.438074e-54	1.414951e-51
MsaG007541	MsaG019113	0.811375	1.238920e-50	2.187994e-48
MsaG007565	MsaG019113	0.869349	6.715458e-66	7.572577e-63
MsaG007950	MsaG019113	0.828151	1.885594e-54	5.178321e-52
MsaG007951	MsaG019113	0.823628	2.209402e-53	5.354287e-51
MsaG008022	MsaG019113	0.847335	2.328909e-59	1.153338e-56
MsaG008100	MsaG019113	0.806363	1.446054e-49	2.263496e-47
MsaG008106	MsaG019113	0.816984	7.251027e-52	1.474391e-49
MsaG008166	MsaG019113	0.815753	1.363019e-51	2.685534e-49
MsaG008248	MsaG019113	0.826719	4.141052e-54	1.092564e-51
MsaG008285	MsaG019113	0.806312	1.482187e-49	2.317271e-47
MsaG008372	MsaG019113	0.805302	2.410312e-49	3.679855e-47
MsaG008712	MsaG019113	0.802619	8.651557e-49	1.241371e-46
MsaG009281	MsaG019113	0.833363	1.009954e-55	3.222319e-53
MsaG011079	MsaG019113	0.810613	1.808545e-50	3.134962e-48
MsaG011477	MsaG019113	0.805845	1.856500e-49	2.870531e-47
MsaG011833	MsaG019113	0.809337	3.394772e-50	5.704897e-48
MsaG011783	MsaG019113	0.825132	9.824779e-54	2.480422e-51
MsaG011951	MsaG019113	0.829723	7.881051e-55	2.262825e-52
MsaG012023	MsaG019113	0.844405	1.443344e-58	6.485394e-56
MsaG012049	MsaG019113	0.808520	5.066860e-50	8.349505e-48
MsaG012262	MsaG019113	0.823516	2.346541e-53	5.669091e-51
MsaG012454	MsaG019113	0.821342	7.464844e-53	1.701121e-50
MsaG012630	MsaG019113	0.814442	2.655441e-51	5.061687e-49
MsaG012673	MsaG019113	0.802247	1.031320e-48	1.467176e-46
MsaG012707	MsaG019113	0.800145	2.763004e-48	3.747919e-46
MsaG012778	MsaG019113	0.818944	2.627633e-52	5.620795e-50
MsaG013148	MsaG019113	0.805402	2.296987e-49	3.514999e-47
MsaG013786	MsaG019113	0.802051	1.131036e-48	1.601872e-46
MsaG014078	MsaG019113	0.822849	3.352860e-53	7.955416e-51
MsaG014289	MsaG019113	0.835618	2.757205e-56	9.408150e-54
MsaG014368	MsaG019113	0.836132	2.045169e-56	7.087319e-54
MsaG014542	MsaG019113	0.854877	1.774006e-61	1.141042e-58
MsaG015807	MsaG019113	0.821300	7.633088e-53	1.737568e-50
MsaG016540	MsaG019113	0.837005	1.228515e-56	4.370563e-54
MsaG017232	MsaG019113	0.818270	3.731214e-52	7.842206e-50
MsaG017256	MsaG019113	0.802566	8.871077e-49	1.271337e-46
MsaG017284	MsaG019113	0.840038	2.043073e-57	7.985383e-55
MsaG017398	MsaG019113	0.837020	1.217993e-56	4.335153e-54
MsaG017464	MsaG019113	0.812996	5.510377e-51	1.012945e-48
MsaG017509	MsaG019113	0.849559	5.685316e-60	3.035698e-57
MsaG018059	MsaG019113	0.811121	1.405388e-50	2.466591e-48
MsaG018069	MsaG019113	0.812252	7.999131e-51	1.443418e-48
MsaG018103	MsaG019113	0.828006	2.042889e-54	5.587435e-52
MsaG018190	MsaG019113	0.860383	4.221658e-63	3.331260e-60
MsaG018245	MsaG019113	0.831955	2.248116e-55	6.884428e-53
MsaG018397	MsaG019113	0.838531	5.006146e-57	1.866604e-54
MsaG018548	MsaG019113	0.805555	2.134503e-49	3.277932e-47
MsaG018671	MsaG019113	0.825200	9.470987e-54	2.395529e-51
MsaG019084	MsaG019113	0.838074	6.556856e-57	2.410308e-54
MsaG019110	MsaG019113	0.849198	7.158521e-60	3.775405e-57
MsaG019112	MsaG019113	0.897948	1.950033e-76	8.859180e-73
MsaG019113	MsaG019215	0.825300	8.969988e-54	2.275078e-51
MsaG019113	MsaG019422	0.802794	7.964285e-49	1.147308e-46
MsaG019113	MsaG019572	0.817521	5.498804e-52	1.133646e-49
MsaG019113	MsaG019576	0.810923	1.551266e-50	2.709379e-48
MsaG019113	MsaG019640	0.806475	1.369467e-49	2.149374e-47
MsaG019113	MsaG020566	0.823105	2.923761e-53	6.985288e-51
MsaG019113	MsaG020603	0.827239	3.114385e-54	8.336691e-52
MsaG019113	MsaG020718	0.806024	1.702687e-49	2.643798e-47
MsaG019113	MsaG021322	0.803937	4.628232e-49	6.845906e-47
MsaG019113	MsaG021432	0.800599	2.235640e-48	3.063919e-46
MsaG019113	MsaG022227	0.804241	4.004970e-49	5.965913e-47
MsaG019113	MsaG022300	0.810948	1.531525e-50	2.676599e-48
MsaG019113	MsaG022746	0.806051	1.680805e-49	2.611544e-47
MsaG019113	MsaG023153	0.814290	2.868941e-51	5.447761e-49
MsaG019113	MsaG023432	0.830882	4.119372e-55	1.222660e-52
MsaG019113	MsaG023474	0.850458	3.193254e-60	1.758089e-57
MsaG019113	MsaG023753	0.820709	1.042540e-52	2.336238e-50
MsaG019113	MsaG024001	0.816370	9.939225e-52	1.989341e-49
MsaG019113	MsaG024546	0.810004	2.443609e-50	4.173438e-48
MsaG019113	MsaG024668	0.833812	7.811269e-56	2.525295e-53
MsaG019113	MsaG025247	0.824309	1.532142e-53	3.782245e-51
MsaG019113	MsaG025349	0.807704	7.547484e-50	1.219551e-47
MsaG019113	MsaG025418	0.822033	5.177471e-53	1.201763e-50
MsaG019113	MsaG025552	0.842911	3.607028e-58	1.544416e-55
MsaG019113	MsaG025760	0.824846	1.147000e-53	2.873161e-51
MsaG019113	MsaG027022	0.803388	6.009874e-49	8.777325e-47
MsaG019113	MsaG027243	0.858615	1.426094e-62	1.052233e-59
MsaG019113	MsaG027272	0.807552	8.124682e-50	1.308023e-47
MsaG019113	MsaG027651	0.812837	5.966613e-51	1.092473e-48
MsaG019113	MsaG027689	0.851578	1.548572e-60	8.862124e-58
MsaG019113	MsaG027839	0.806794	1.174034e-49	1.856448e-47
MsaG019113	MsaG028088	0.807603	7.927657e-50	1.277830e-47
MsaG019113	MsaG028419	0.814640	2.402532e-51	4.602217e-49
MsaG019113	MsaG028621	0.844942	1.036582e-58	4.741630e-56
MsaG019113	MsaG028645	0.832116	2.052249e-55	6.314210e-53
MsaG019113	MsaG028862	0.841369	9.186889e-58	3.744418e-55
MsaG019113	MsaG028990	0.811053	1.454377e-50	2.548285e-48
MsaG019113	MsaG029046	0.851567	1.559826e-60	8.923071e-58
MsaG019113	MsaG029164	0.821485	6.920698e-53	1.583137e-50
MsaG019113	MsaG029396	0.842758	3.959418e-58	1.687084e-55
MsaG019113	MsaG029361	0.843008	3.400259e-58	1.460451e-55
MsaG019113	MsaG029442	0.837370	9.923972e-57	3.569987e-54
MsaG019113	MsaG029478	0.828296	1.740458e-54	4.799114e-52
MsaG019113	MsaG029613	0.800708	2.124608e-48	2.918991e-46
MsaG019113	MsaG029932	0.808861	4.288022e-50	7.124460e-48
MsaG019113	MsaG030226	0.834045	6.831215e-56	2.223743e-53
MsaG019113	MsaG030331	0.807383	8.818847e-50	1.414070e-47
MsaG019113	MsaG032674	0.800374	2.482742e-48	3.385315e-46
MsaG019113	MsaG032815	0.832058	2.121257e-55	6.515469e-53
MsaG019113	MsaG033646	0.835514	2.928767e-56	9.962529e-54
MsaG019113	MsaG033734	0.840919	1.205225e-57	4.842666e-55
MsaG019113	MsaG034130	0.807148	9.888255e-50	1.576688e-47
MsaG019113	MsaG034173	0.817738	4.913464e-52	1.018639e-49
MsaG019113	MsaG034177	0.856750	5.064088e-62	3.486749e-59
MsaG019113	MsaG034256	0.815722	1.384533e-51	2.725859e-49
MsaG019113	MsaG035051	0.823064	2.988358e-53	7.131931e-51
MsaG019113	MsaG035198	0.806586	1.297937e-49	2.042424e-47
MsaG019113	MsaG035642	0.804992	2.796439e-49	4.238801e-47
MsaG019113	MsaG036293	0.805518	2.172859e-49	3.333959e-47
MsaG019113	MsaG036444	0.834358	5.706978e-56	1.875400e-53
MsaG019113	MsaG036642	0.811793	1.005834e-50	1.794665e-48
MsaG019113	MsaG039867	0.803576	5.495683e-49	8.061211e-47
MsaG019113	MsaG039881	0.817084	6.885819e-52	1.403779e-49
MsaG019113	MsaG039961	0.807477	8.428014e-50	1.354409e-47
MsaG019113	MsaG040435	0.804053	4.380806e-49	6.497582e-47
MsaG019113	MsaG040449	0.804580	3.405943e-49	5.113489e-47
MsaG019113	MsaG040451	0.828904	1.242873e-54	3.486079e-52
MsaG019113	MsaG041076	0.816622	8.734674e-52	1.759501e-49
MsaG019113	MsaG041793	0.819103	2.419406e-52	5.196987e-50
MsaG019113	MsaG041873	0.838255	5.891272e-57	2.177763e-54
MsaG019113	MsaG042082	0.855008	1.626014e-61	1.050766e-58
MsaG019113	MsaG042241	0.830810	4.288337e-55	1.270166e-52
MsaG019113	MsaG042321	0.800942	1.904545e-48	2.630350e-46
MsaG019113	MsaG042700	0.835782	2.506889e-56	8.596008e-54
MsaG019113	MsaG043133	0.836682	1.484629e-56	5.230393e-54
MsaG019113	MsaG043272	0.813132	5.145181e-51	9.490303e-49
MsaG019113	MsaG044863	0.809642	2.921267e-50	4.945754e-48
MsaG019113	MsaG045148	0.845499	7.338710e-59	3.418314e-56
MsaG019113	MsaG045149	0.851944	1.221597e-60	7.082644e-58
MsaG019113	MsaG045285	0.832086	2.087453e-55	6.416924e-53
MsaG019113	MsaG045323	0.800641	2.191701e-48	3.006645e-46
MsaG019113	MsaG045701	0.832985	1.252703e-55	3.952691e-53
MsaG019113	MsaG045894	0.830293	5.731971e-55	1.672807e-52
MsaG019113	MsaG045984	0.818608	3.130707e-52	6.638229e-50
MsaG019113	MsaG046004	0.853705	3.855870e-61	2.378472e-58
MsaG019113	MsaG046214	0.828532	1.527201e-54	4.239382e-52
MsaG019113	MsaG046403	0.801284	1.622217e-48	2.257834e-46
MsaG019113	MsaG046431	0.862130	1.246095e-63	1.051080e-60
MsaG019113	MsaG046473	0.811927	9.410141e-51	1.684602e-48
MsaG019113	MsaG046936	0.800193	2.701989e-48	3.669107e-46
MsaG019113	MsaG047118	0.817806	4.745952e-52	9.856493e-50
MsaG019113	MsaG047160	0.811389	1.230497e-50	2.173876e-48
MsaG019113	MsaG004516	0.806996	1.064167e-49	1.690749e-47
MsaG019113	MsaG000819	0.823174	2.818832e-53	6.747135e-51
MsaG019113	MsaG009465	0.805631	2.057890e-49	3.166016e-47
MsaG019113	MsaG009633	0.843205	3.015414e-58	1.303305e-55
MsaG019113	MsaG011921	0.817680	5.065028e-52	1.048452e-49
MsaG019113	MsaG017401	0.828679	1.408375e-54	3.925339e-52
MsaG019113	MsaG012407	0.846355	4.306289e-59	2.063747e-56
MsaG019113	MsaG014865	0.803601	5.430591e-49	7.970293e-47
MsaG019113	MsaG012532	0.830976	3.906151e-55	1.162504e-52
MsaG019113	MsaG012697	0.812429	7.321324e-51	1.326999e-48
MsaG019113	MsaG019408	0.823220	2.749390e-53	6.589196e-51
MsaG019113	MsaG019886	0.809749	2.771728e-50	4.704754e-48
MsaG019113	MsaG019073	0.802293	1.009033e-48	1.437056e-46
MsaG019113	MsaG021171	0.840303	1.744138e-57	6.873782e-55
MsaG019113	MsaG027109	0.833016	1.231004e-55	3.887656e-53
MsaG019113	MsaG032460	0.833479	9.446873e-56	3.024512e-53
MsaG019113	MsaG032891	0.807588	7.984526e-50	1.286534e-47
MsaG019113	MsaG031629	0.807719	7.489206e-50	1.210588e-47
MsaG019113	MsaG034616	0.824420	1.443803e-53	3.574772e-51
MsaG019113	MsaG033278	0.835175	3.563178e-56	1.199790e-53
MsaG019113	MsaG033433	0.806371	1.440265e-49	2.254884e-47
MsaG019113	MsaG032451	0.857877	2.359890e-62	1.693928e-59
MsaG019113	MsaG031806	0.825767	6.961365e-54	1.788632e-51
MsaG019113	MsaG031429	0.876632	2.492208e-68	3.854926e-65
MsaG019113	MsaG034989	0.817333	6.058417e-52	1.243005e-49
MsaG019113	MsaG036787	0.800744	2.088819e-48	2.872126e-46
MsaG019113	MsaG037076	0.813021	5.441838e-51	1.000986e-48
MsaG019113	MsaG037376	0.824701	1.240473e-53	3.094932e-51
MsaG019113	MsaG036786	0.809676	2.872965e-50	4.867949e-48
MsaG019113	MsaG040778	0.801889	1.220481e-48	1.722281e-46
MsaG019113	MsaG043681	0.840230	1.821846e-57	7.163323e-55
MsaG019113	MsaG043534	0.819240	2.252891e-52	4.856612e-50
MsaG019113	MsaG042135	0.821384	7.300265e-53	1.665494e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG019113	MtrunA17_Chr4g0011841	99.548	221	1	0	1	221	1	221	9.76e-169	463
MsaG019113	MtrunA17_Chr4g0056521	71.770	209	51	6	18	221	13	218	1.52e-93	273
MsaG019113	MtrunA17_Chr4g0063931	53.368	193	64	4	20	206	11	183	3.05e-60	187
MsaG019113	MtrunA17_Chr2g0322221	52.041	196	83	5	19	211	8	195	4.01e-57	179
MsaG019113	MtrunA17_Chr4g0025361	54.601	163	61	3	22	184	8	157	2.97e-51	164
MsaG019113	MtrunA17_Chr5g0413381	50.000	158	71	2	23	179	12	162	1.23e-46	152
MsaG019113	MtrunA17_Chr5g0419871	46.875	160	65	5	21	178	14	155	2.32e-35	123

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG019113	AT2G45190.1	67.431	218	49	6	19	221	19	229	1.45e-96	281
MsaG019113	AT4G00180.1	62.661	233	59	10	8	219	13	238	9.63e-81	241
MsaG019113	AT4G00180.2	61.722	209	57	9	32	219	1	207	4.42e-68	208
MsaG019113	AT2G45190.2	63.372	172	41	6	65	221	1	165	7.28e-66	201
MsaG019113	AT2G26580.2	57.485	167	49	5	22	186	8	154	1.74e-56	177
MsaG019113	AT2G26580.1	57.485	167	49	5	22	186	8	154	1.74e-56	177
MsaG019113	AT1G08465.1	56.322	174	52	5	22	188	7	163	1.42e-55	175
MsaG019113	AT1G23420.1	46.584	161	84	2	24	182	20	180	8.17e-40	137
MsaG019113	AT1G23420.2	46.584	161	84	2	24	182	51	211	4.45e-39	135
MsaG019113	AT1G69180.1	39.490	157	77	2	22	178	18	156	9.86e-31	112

Find 56 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTATTAGCAGGTGGAGGTTT+AGG	0.195251	4:-23073692	None:intergenic
ATCATCAAATCATTTGGATT+TGG	0.277959	4:-23073635	None:intergenic
CACTTTCCACACATTCATTT+CGG	0.297543	4:+23075862	MsaT019113.1:CDS
CTTCAACCCTCAAACTCTTA+TGG	0.305185	4:+23073204	MsaT019113.1:CDS
AGAGTTGTTGCTGTTGTTGC+TGG	0.315337	4:-23072884	None:intergenic
TATTAGCAGGTGGAGGTTTA+GGG	0.330394	4:-23073691	None:intergenic
GCCTCTCTGTGGCTTATATC+AGG	0.334060	4:-23075630	None:intergenic
TTCTTCACGGGTTGATGATC+AGG	0.349751	4:-23075892	None:intergenic
AACAAACACACTTCTTTAGT+AGG	0.360387	4:-23076139	None:intergenic
GTGTTCATCATCAAATCATT+TGG	0.376681	4:-23073641	None:intergenic
TTACTTGATGAAGCGGTTGT+AGG	0.396976	4:-23074696	None:intergenic
TGTCCAAGGTGAAGTTGATT+TGG	0.407277	4:-23073175	None:intergenic
TGTTGCTGTTGTTGCTGGTC+CGG	0.423782	4:-23072879	None:intergenic
GAGGACGTGCTTATGAAAGA+TGG	0.432558	4:+23076084	MsaT019113.1:CDS
TTCATCATCATGTTTGTTGA+AGG	0.455442	4:-23073605	None:intergenic
AATTTCTTACGTCTATTAGC+AGG	0.457462	4:-23073704	None:intergenic
GAGATCCAACGTATCAAAGC+TGG	0.478771	4:+23075603	MsaT019113.1:CDS
GAAGAAAGCTAATGTTCGTC+AGG	0.494623	4:+23075909	MsaT019113.1:CDS
CGAACATTAGCTTTCTTCAC+GGG	0.494923	4:-23075904	None:intergenic
ACAAACACACTTCTTTAGTA+GGG	0.496640	4:-23076138	None:intergenic
ACTCATACCATAAGAGTTTG+AGG	0.497892	4:-23073211	None:intergenic
GGAACTCTCTGTCTCTTCTC+CGG	0.501243	4:-23074668	None:intergenic
CGAAATGAATGTGTGGAAAG+TGG	0.502844	4:-23075861	None:intergenic
TTGTTGCTGGTCCGGTGAAA+AGG	0.508490	4:-23072871	None:intergenic
AGGTGAAGTTGATTTGGAGC+AGG	0.517398	4:-23073169	None:intergenic
ACAGCAACAACTCTCTCCTT+CGG	0.518591	4:+23072893	MsaT019113.1:CDS
TGCAATGGACATAACAAAGC+TGG	0.526911	4:-23072917	None:intergenic
CTCATACCATAAGAGTTTGA+GGG	0.529909	4:-23073210	None:intergenic
ATTAAACTTACTTGATGAAG+CGG	0.531165	4:-23074703	None:intergenic
ACGAACATTAGCTTTCTTCA+CGG	0.533864	4:-23075905	None:intergenic
TTACGTCTATTAGCAGGTGG+AGG	0.545636	4:-23073698	None:intergenic
CTGGTCCGGTGAAAAGGAAG+TGG	0.549720	4:-23072865	None:intergenic
AGGACGTGCTTATGAAAGAT+GGG	0.553995	4:+23076085	MsaT019113.1:CDS
TTTCATTGTGTAGGATTCAG+AGG	0.560695	4:+23076065	MsaT019113.1:intron
ATGAAGCGGTTGTAGGCAGA+TGG	0.560728	4:-23074689	None:intergenic
TTCTTACGTCTATTAGCAGG+TGG	0.566691	4:-23073701	None:intergenic
GATTCCCAGCTTTGATACGT+TGG	0.580008	4:-23075608	None:intergenic
GAAGTTGATTTGGAGCAGGA+AGG	0.583401	4:-23073165	None:intergenic
AAAGGAAGTGGATGATGAAG+AGG	0.587043	4:-23072853	None:intergenic
GCTCCAAATCAACTTCACCT+TGG	0.591195	4:+23073172	MsaT019113.1:CDS
AGATCCAACGTATCAAAGCT+GGG	0.600203	4:+23075604	MsaT019113.1:CDS
GAAATGAATGTGTGGAAAGT+GGG	0.615090	4:-23075860	None:intergenic
ATGATGAACACAATGAGAGG+AGG	0.619560	4:+23073653	MsaT019113.1:CDS
CACGCATGTTAACTGAGAGA+AGG	0.621310	4:-23073135	None:intergenic
CATGTTAACTGAGAGAAGGT+TGG	0.622869	4:-23073131	None:intergenic
TGATGAACACAATGAGAGGA+GGG	0.625320	4:+23073654	MsaT019113.1:CDS
ACATAACAAAGCTGGTCCGA+AGG	0.642303	4:-23072909	None:intergenic
GGTTGAAGTAAGTGTGTCCA+AGG	0.648511	4:-23073189	None:intergenic
GTCTTGAACAAACTTGTGCA+AGG	0.649953	4:-23073082	None:intergenic
CAGTGTCACAGAAATTGCAA+TGG	0.650774	4:-23072932	None:intergenic
TTTCTGTGACACTGTTCTCG+CGG	0.670363	4:+23072941	MsaT019113.1:CDS
CTGCACTAAAAGCCTCTCTG+TGG	0.673003	4:-23075641	None:intergenic
AAGACTGTGACAGTGAGATG+TGG	0.685505	4:+23073100	MsaT019113.1:CDS
TTGATGATGAACACAATGAG+AGG	0.686722	4:+23073650	MsaT019113.1:CDS
TCCTGATATAAGCCACAGAG+AGG	0.691291	4:+23075629	MsaT019113.1:CDS
ATAAGTCCGAAATGAATGTG+TGG	0.723401	4:-23075868	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	23072849	23076146	23072849	ID=MsaG019113
Chr4	mRNA	23072849	23076146	23072849	ID=MsaT019113.1;Parent=MsaG019113
Chr4	exon	23072849	23072962	23072849	ID=MsaT019113.1.exon1;Parent=MsaT019113.1
Chr4	CDS	23072849	23072962	23072849	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23073073	23073225	23073073	ID=MsaT019113.1.exon2;Parent=MsaT019113.1
Chr4	CDS	23073073	23073225	23073073	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23073587	23073716	23073587	ID=MsaT019113.1.exon3;Parent=MsaT019113.1
Chr4	CDS	23073587	23073716	23073587	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23074666	23074714	23074666	ID=MsaT019113.1.exon4;Parent=MsaT019113.1
Chr4	CDS	23074666	23074714	23074666	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23075599	23075674	23075599	ID=MsaT019113.1.exon5;Parent=MsaT019113.1
Chr4	CDS	23075599	23075674	23075599	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23075856	23075930	23075856	ID=MsaT019113.1.exon6;Parent=MsaT019113.1
Chr4	CDS	23075856	23075930	23075856	ID=cds.MsaT019113.1;Parent=MsaT019113.1
Chr4	exon	23076078	23076146	23076078	ID=MsaT019113.1.exon7;Parent=MsaT019113.1
Chr4	CDS	23076078	23076146	23076078	ID=cds.MsaT019113.1;Parent=MsaT019113.1

Gene Sequence

>MsaT019113.1

ATGTCCTCTTCATCATCCACTTCCTTTTCACCGGACCAGCAACAACAGCAACAACTCTCTCCTTCGGACCAGCTTTGTTATGTCCATTGCAATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGACTGTGACAGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGTTAACATGCGTGCTTTGCTCCTTCCTGCTCCAAATCAACTTCACCTTGGACACACTTACTTCAACCCTCAAACTCTTATGGAGGAGATTCGAAATGCACCTTCAACAAACATGATGATGAATCAGATTCCAAATCCAAATGATTTGATGATGAACACAATGAGAGGAGGGCATCATGAAGAAATCCCTAAACCTCCACCTGCTAATAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAGGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGATTCAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACAAGCAAATGTAGGTGTCTCTCCCTACTAA

Protein sequence

>MsaT019113.1

MSSSSSTSFSPDQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFNPQTLMEEIRNAPSTNMMMNQIPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDVLMKDGFFTQANVGVSPY*