AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG020103


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020103 MtrunA17_Chr4g0022901 89.928 278 19 3 1 275 1 272 1.75e-174 482
MsaG020103 MtrunA17_Chr4g0022911 76.510 298 40 5 1 275 1 291 3.58e-153 429
MsaG020103 MtrunA17_Chr4g0022931 74.286 280 59 7 1 275 1 272 2.16e-132 375
MsaG020103 MtrunA17_Chr2g0323351 46.595 279 113 8 1 275 1 247 2.51e-75 229
MsaG020103 MtrunA17_Chr1g0167661 42.264 265 128 8 1 254 1 251 2.94e-59 189
MsaG020103 MtrunA17_Chr1g0167691 47.739 199 92 2 1 199 1 187 4.47e-59 188
MsaG020103 MtrunA17_Chr1g0187761 49.000 200 91 3 1 199 1 190 6.20e-59 188
MsaG020103 MtrunA17_Chr7g0274581 48.947 190 84 2 1 180 1 187 1.24e-58 186
MsaG020103 MtrunA17_Chr7g0261281 68.067 119 38 0 1 119 1 119 6.25e-57 184
MsaG020103 MtrunA17_Chr4g0022881 64.035 114 41 0 1 114 1 114 3.69e-55 177
MsaG020103 MtrunA17_Chr3g0115821 62.393 117 44 0 1 117 1 117 4.89e-54 178
MsaG020103 MtrunA17_Chr2g0323411 65.812 117 40 0 1 117 1 117 6.24e-54 177
MsaG020103 MtrunA17_Chr4g0042671 66.957 115 38 0 1 115 1 115 1.32e-53 179
MsaG020103 MtrunA17_Chr1g0203411 62.931 116 43 0 1 116 1 116 1.76e-53 175
MsaG020103 MtrunA17_Chr4g0039971 62.393 117 44 0 1 117 2 118 7.61e-53 175
MsaG020103 MtrunA17_Chr7g0228891 42.202 218 113 4 1 208 1 215 8.82e-53 173
MsaG020103 MtrunA17_Chr2g0323321 78.261 92 19 1 1 92 1 91 1.48e-52 167
MsaG020103 MtrunA17_Chr4g0057031 50.617 162 75 2 1 158 1 161 1.49e-52 172
MsaG020103 MtrunA17_Chr2g0281071 63.559 118 42 1 1 117 1 118 1.88e-52 174
MsaG020103 MtrunA17_Chr4g0070611 37.079 267 139 5 1 267 1 238 2.70e-52 172
MsaG020103 MtrunA17_Chr7g0217741 51.316 152 68 2 1 148 1 150 4.52e-52 172
MsaG020103 MtrunA17_Chr6g0453471 64.348 115 41 0 1 115 1 115 8.91e-52 172
MsaG020103 MtrunA17_Chr4g0048511 61.864 118 44 1 1 117 1 118 9.04e-52 172
MsaG020103 MtrunA17_Chr3g0110351 56.429 140 55 2 1 136 1 138 9.89e-52 171
MsaG020103 MtrunA17_Chr4g0022891 47.826 184 87 5 1 179 1 180 1.22e-51 169
MsaG020103 MtrunA17_Chr4g0070641 63.559 118 43 0 1 118 1 118 1.28e-51 166
MsaG020103 MtrunA17_Chr1g0193801 41.406 256 112 5 1 224 1 250 2.07e-51 172
MsaG020103 MtrunA17_Chr5g0434571 62.609 115 43 0 1 115 37 151 3.49e-51 171
MsaG020103 MtrunA17_Chr5g0410961 57.364 129 55 0 1 129 1 129 4.59e-51 171
MsaG020103 MtrunA17_Chr4g0037141 59.322 118 48 0 1 118 1 118 6.62e-51 168
MsaG020103 MtrunA17_Chr1g0193371 63.478 115 42 0 1 115 1 115 1.01e-50 170
MsaG020103 MtrunA17_Chr3g0131121 62.609 115 43 0 1 115 1 115 1.30e-50 168
MsaG020103 MtrunA17_Chr5g0395281 52.857 140 62 1 1 136 1 140 1.47e-50 168
MsaG020103 MtrunA17_Chr8g0346561 59.231 130 53 0 1 130 1 130 1.99e-50 167
MsaG020103 MtrunA17_Chr7g0275911 62.609 115 43 0 1 115 1 115 2.63e-50 166
MsaG020103 MtrunA17_Chr2g0311221 65.138 109 38 0 2 110 4 112 3.67e-50 168
MsaG020103 MtrunA17_Chr4g0058631 60.684 117 46 0 1 117 1 117 4.24e-50 168
MsaG020103 MtrunA17_Chr8g0349261 63.025 119 42 2 1 117 1 119 5.37e-50 166
MsaG020103 MtrunA17_Chr4g0068061 60.870 115 45 0 1 115 1 115 7.23e-50 167
MsaG020103 MtrunA17_Chr3g0103281 60.000 115 46 0 1 115 1 115 7.72e-50 167
MsaG020103 MtrunA17_Chr1g0211161 60.169 118 46 1 1 117 1 118 1.15e-49 163
MsaG020103 MtrunA17_Chr8g0385321 59.016 122 46 1 1 118 1 122 3.04e-49 165
MsaG020103 MtrunA17_Chr3g0117091 59.829 117 47 0 1 117 1 117 4.57e-49 166
MsaG020103 MtrunA17_Chr7g0270891 61.739 115 44 0 1 115 1 115 7.08e-49 166
MsaG020103 MtrunA17_Chr7g0217221 60.870 115 45 0 1 115 1 115 1.07e-48 162
MsaG020103 MtrunA17_Chr5g0435101 60.000 115 46 0 3 117 2 116 2.59e-48 159
MsaG020103 MtrunA17_Chr6g0452271 58.120 117 49 0 1 117 1 117 3.64e-48 163
MsaG020103 MtrunA17_Chr1g0151941 47.853 163 76 3 1 161 1 156 8.09e-48 159
MsaG020103 MtrunA17_Chr2g0330041 58.120 117 49 0 1 117 1 117 2.12e-47 162
MsaG020103 MtrunA17_Chr3g0121241 39.565 230 127 4 5 231 35 255 2.54e-47 160
MsaG020103 MtrunA17_Chr8g0342541 56.410 117 51 0 1 117 1 117 2.91e-47 160
MsaG020103 MtrunA17_Chr1g0194951 55.224 134 58 1 1 132 1 134 3.10e-47 161
MsaG020103 MtrunA17_Chr2g0309911 60.360 111 44 0 7 117 6 116 6.13e-47 159
MsaG020103 MtrunA17_Chr8g0342521 55.556 117 52 0 1 117 1 117 1.66e-46 159
MsaG020103 MtrunA17_Chr4g0044421 61.207 116 44 1 3 117 2 117 2.95e-46 153
MsaG020103 MtrunA17_Chr8g0342481 57.258 124 48 3 1 120 1 123 3.55e-46 159
MsaG020103 MtrunA17_Chr7g0271241 61.468 109 42 0 1 109 1 109 6.68e-46 158
MsaG020103 MtrunA17_Chr5g0417821 63.551 107 39 0 11 117 6 112 7.87e-46 155
MsaG020103 MtrunA17_Chr3g0135311 39.500 200 118 3 1 198 1 199 8.26e-46 157
MsaG020103 MtrunA17_Chr7g0254411 58.261 115 48 0 1 115 1 115 9.11e-46 157
MsaG020103 MtrunA17_Chr6g0453211 60.000 110 44 0 1 110 1 110 9.58e-46 156
MsaG020103 MtrunA17_Chr4g0060721 56.522 115 50 0 1 115 2 116 1.27e-45 156
MsaG020103 MtrunA17_Chr1g0152011 49.618 131 65 1 1 130 1 131 1.29e-45 156
MsaG020103 MtrunA17_Chr4g0028311 55.932 118 51 1 1 117 1 118 1.33e-45 155
MsaG020103 MtrunA17_Chr5g0400821 55.932 118 51 1 1 117 1 118 2.38e-45 155
MsaG020103 MtrunA17_Chr3g0092401 56.522 115 50 0 1 115 2 116 4.08e-45 154
MsaG020103 MtrunA17_Chr7g0264641 55.932 118 51 1 1 117 1 118 6.31e-45 152
MsaG020103 MtrunA17_Chr4g0055981 61.111 108 42 0 9 116 52 159 1.54e-44 150
MsaG020103 MtrunA17_Chr2g0328771 63.462 104 38 0 12 115 20 123 3.56e-44 152
MsaG020103 MtrunA17_Chr3g0088461 62.963 108 40 0 8 115 18 125 3.96e-44 152
MsaG020103 MtrunA17_Chr8g0387421 54.783 115 52 0 1 115 1 115 5.18e-44 151
MsaG020103 MtrunA17_Chr2g0327351 57.658 111 46 1 1 110 1 111 6.27e-44 151
MsaG020103 MtrunA17_Chr5g0434931 43.684 190 86 4 11 185 34 217 1.12e-43 149
MsaG020103 MtrunA17_Chr1g0180391 50.735 136 57 1 12 137 19 154 1.87e-43 147
MsaG020103 MtrunA17_Chr4g0054391 48.905 137 69 1 1 136 1 137 4.13e-43 148
MsaG020103 MtrunA17_Chr5g0397231 55.455 110 49 0 1 110 1 110 4.41e-43 149
MsaG020103 MtrunA17_Chr1g0209661 54.198 131 57 1 6 136 21 148 4.44e-43 149
MsaG020103 MtrunA17_Chr6g0487491 50.331 151 59 3 1 135 1 151 5.70e-43 147
MsaG020103 MtrunA17_Chr6g0470971 53.906 128 50 1 9 136 11 129 9.24e-43 147
MsaG020103 MtrunA17_Chr4g0032401 56.303 119 51 1 12 130 17 134 9.77e-43 149
MsaG020103 MtrunA17_Chr5g0434911 57.658 111 47 0 7 117 16 126 3.41e-42 145
MsaG020103 MtrunA17_Chr7g0269831 59.483 116 47 0 1 116 1 116 3.50e-42 147
MsaG020103 MtrunA17_Chr1g0203441 59.259 108 44 0 9 116 10 117 3.81e-42 145
MsaG020103 MtrunA17_Chr1g0194291 47.468 158 68 2 8 159 17 165 7.09e-42 144
MsaG020103 MtrunA17_Chr4g0072751 56.757 111 47 1 1 110 1 111 1.10e-41 146
MsaG020103 MtrunA17_Chr1g0168661 56.410 117 51 0 13 129 22 138 1.39e-41 143
MsaG020103 MtrunA17_Chr1g0186061 54.701 117 53 0 13 129 21 137 1.05e-40 141
MsaG020103 MtrunA17_Chr7g0228231 50.336 149 70 1 12 160 14 158 1.06e-40 140
MsaG020103 MtrunA17_Chr7g0240821 48.936 141 66 3 16 152 5 143 1.34e-40 140
MsaG020103 MtrunA17_Chr3g0080861 43.506 154 78 2 12 156 37 190 1.77e-40 146
MsaG020103 MtrunA17_Chr1g0154031 48.837 129 66 0 12 140 76 204 1.83e-40 144
MsaG020103 MtrunA17_Chr1g0194301 47.436 156 67 2 8 157 29 175 2.47e-40 141
MsaG020103 MtrunA17_Chr7g0228991 58.879 107 44 0 11 117 28 134 2.80e-40 140
MsaG020103 MtrunA17_Chr5g0434831 58.879 107 44 0 11 117 6 112 4.02e-40 137
MsaG020103 MtrunA17_Chr5g0434841 58.879 107 44 0 11 117 19 125 4.28e-40 141
MsaG020103 MtrunA17_Chr8g0360111 61.165 103 40 0 10 112 23 125 4.54e-40 140
MsaG020103 MtrunA17_Chr3g0099131 55.660 106 47 0 10 115 39 144 6.13e-40 145
MsaG020103 MtrunA17_Chr2g0327821 40.805 174 90 3 12 184 6 167 1.41e-39 137
MsaG020103 MtrunA17_Chr8g0354661 57.692 104 44 0 12 115 37 140 1.59e-39 144
MsaG020103 MtrunA17_Chr8g0343831 54.783 115 48 1 1 115 1 111 1.61e-39 138
MsaG020103 MtrunA17_Chr7g0220341 48.485 132 62 2 11 140 24 151 2.49e-39 138
MsaG020103 MtrunA17_Chr6g0450101 45.087 173 88 4 12 180 14 183 3.17e-39 136
MsaG020103 MtrunA17_Chr4g0042611 60.227 88 35 0 1 88 1 88 5.24e-37 126
MsaG020103 MtrunA17_Chr2g0322521 56.075 107 47 0 9 115 26 132 7.91e-37 134
MsaG020103 MtrunA17_Chr4g0030881 53.636 110 44 1 13 115 8 117 1.59e-35 128
MsaG020103 MtrunA17_Chr2g0293911 54.955 111 50 0 6 116 18 128 7.70e-35 128
MsaG020103 MtrunA17_Chr2g0294811 56.522 92 40 0 1 92 1 92 2.25e-34 120
MsaG020103 MtrunA17_Chr5g0395221 59.091 88 36 0 1 88 1 88 2.92e-34 119
MsaG020103 MtrunA17_Chr4g0068921 44.898 147 72 1 8 154 20 157 8.65e-34 121
MsaG020103 MtrunA17_Chr1g0192411 47.826 115 60 0 1 115 1 115 1.06e-33 126
MsaG020103 MtrunA17_Chr7g0247131 69.863 73 22 0 43 115 9 81 1.86e-33 122
MsaG020103 MtrunA17_Chr8g0342531 56.180 89 39 0 1 89 1 89 6.19e-33 118
MsaG020103 MtrunA17_Chr5g0440781 39.735 151 83 3 13 155 13 163 1.11e-32 118
MsaG020103 MtrunA17_Chr5g0441141 39.735 151 83 3 13 155 13 163 1.19e-32 120
MsaG020103 MtrunA17_Chr5g0440761 39.735 151 83 3 13 155 13 163 1.26e-32 120
MsaG020103 MtrunA17_Chr8g0342511 55.172 87 39 0 1 87 1 87 4.82e-32 114
MsaG020103 MtrunA17_Chr5g0441131 36.196 163 93 3 1 155 1 160 1.72e-31 115
MsaG020103 MtrunA17_Chr3g0133601 53.398 103 47 1 14 116 37 138 2.59e-31 116
MsaG020103 MtrunA17_Chr8g0342461 54.348 92 37 2 1 89 1 90 4.36e-31 112
MsaG020103 MtrunA17_Chr8g0334881 48.182 110 56 1 8 116 6 115 6.53e-31 117
MsaG020103 MtrunA17_Chr8g0342471 53.261 92 38 2 1 89 1 90 2.32e-30 110
MsaG020103 MtrunA17_Chr6g0454921 49.550 111 54 2 14 124 15 123 5.24e-30 112
MsaG020103 MtrunA17_Chr3g0099141 51.724 87 42 0 8 94 36 122 5.79e-30 110
MsaG020103 MtrunA17_Chr5g0429661 48.544 103 50 2 14 115 122 222 1.21e-29 114
MsaG020103 MtrunA17_Chr5g0401731 37.888 161 90 3 14 174 15 165 1.99e-29 113
MsaG020103 MtrunA17_Chr4g0008551 38.854 157 68 5 14 144 38 192 2.09e-29 114
MsaG020103 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 3.94e-29 111
MsaG020103 MtrunA17_Chr5g0434901 70.588 68 20 0 46 113 7 74 5.82e-29 106
MsaG020103 MtrunA17_Chr4g0013361 41.176 136 76 3 8 142 6 138 7.32e-29 111
MsaG020103 MtrunA17_Chr6g0480581 49.505 101 50 1 14 114 4 103 5.68e-27 105
MsaG020103 MtrunA17_Chr7g0229101 61.972 71 27 0 43 113 3 73 1.86e-26 102
MsaG020103 MtrunA17_Chr4g0058991 44.444 108 57 2 9 115 204 309 2.26e-26 107
MsaG020103 MtrunA17_Chr7g0229131 50.538 93 45 1 43 134 3 95 3.55e-26 101
MsaG020103 MtrunA17_Chr5g0417621 48.544 103 50 2 14 115 134 234 9.55e-26 105
MsaG020103 MtrunA17_Chr7g0228531 47.059 102 52 2 14 115 220 319 1.10e-25 105
MsaG020103 MtrunA17_Chr7g0238631 48.544 103 50 2 14 115 113 213 1.15e-25 105
MsaG020103 MtrunA17_Chr7g0238631 36.000 100 62 2 14 112 61 159 2.08e-13 70.1
MsaG020103 MtrunA17_Chr4g0042501 47.573 103 51 2 14 115 105 205 3.44e-25 103
MsaG020103 MtrunA17_Chr3g0117511 41.748 103 57 2 14 115 183 283 5.92e-25 103
MsaG020103 MtrunA17_Chr5g0425591 51.190 84 40 1 13 95 10 93 8.76e-25 95.1
MsaG020103 MtrunA17_Chr6g0453751 47.872 94 40 2 11 95 19 112 9.35e-25 96.3
MsaG020103 MtrunA17_Chr3g0139671 44.118 102 56 1 14 115 85 185 2.46e-24 102
MsaG020103 MtrunA17_Chr3g0139671 36.000 100 62 2 14 112 33 131 1.69e-13 70.5
MsaG020103 MtrunA17_Chr1g0157731 45.098 102 55 1 14 115 91 191 3.36e-24 102
MsaG020103 MtrunA17_Chr1g0157731 35.000 100 63 2 14 112 39 137 1.26e-13 70.9
MsaG020103 MtrunA17_Chr6g0460661 36.735 147 84 5 14 153 16 160 9.38e-24 94.4
MsaG020103 MtrunA17_Chr3g0125801 46.789 109 55 2 8 115 10 116 1.03e-23 97.4
MsaG020103 MtrunA17_Chr5g0437321 44.660 103 48 2 14 112 19 116 1.33e-23 97.1
MsaG020103 MtrunA17_Chr7g0254261 47.059 102 53 1 14 115 89 189 6.62e-23 96.3
MsaG020103 MtrunA17_Chr6g0460671 33.951 162 91 4 14 175 99 244 1.81e-22 95.1
MsaG020103 MtrunA17_Chr7g0228481 38.129 139 76 4 14 146 220 354 2.63e-22 95.5
MsaG020103 MtrunA17_Chr3g0093811 54.795 73 33 0 43 115 13 85 5.45e-22 92.4
MsaG020103 MtrunA17_Chr7g0228401 35.526 152 77 6 25 159 290 437 1.53e-21 94.0
MsaG020103 MtrunA17_Chr5g0397841 45.833 96 51 1 14 109 110 204 6.09e-21 92.0
MsaG020103 MtrunA17_Chr7g0233061 35.606 132 71 6 14 143 180 299 1.40e-20 90.1
MsaG020103 MtrunA17_Chr1g0177901 28.182 220 127 7 25 225 4 211 8.56e-20 85.1
MsaG020103 MtrunA17_Chr7g0238651 42.708 96 53 1 17 110 10 105 1.18e-18 84.7
MsaG020103 MtrunA17_Chr8g0362231 41.284 109 61 2 16 123 24 130 7.55e-17 79.7
MsaG020103 MtrunA17_Chr2g0323331 33.846 130 82 3 88 214 5 133 3.57e-16 77.4
MsaG020103 MtrunA17_Chr5g0416341 41.176 102 57 2 16 116 28 127 9.82e-16 76.6
MsaG020103 MtrunA17_Chr1g0193901 44.828 87 46 2 12 96 11 97 1.47e-15 71.2
MsaG020103 MtrunA17_Chr1g0193891 44.828 87 46 2 12 96 11 97 1.47e-15 71.2
MsaG020103 MtrunA17_Chr1g0193871 44.828 87 46 2 12 96 11 97 1.47e-15 71.2
MsaG020103 MtrunA17_Chr1g0193881 44.828 87 46 2 12 96 11 97 1.47e-15 71.2
MsaG020103 MtrunA17_Chr5g0434871 63.636 44 16 0 74 117 2 45 6.15e-15 68.2
MsaG020103 MtrunA17_Chr2g0322831 58.974 39 16 0 70 108 34 72 2.62e-11 58.5
MsaG020103 MtrunA17_Chr7g0247141 53.191 47 21 1 1 46 1 47 3.26e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020103 AT2G31180.1 51.256 199 83 3 1 199 1 185 1.07e-60 192
MsaG020103 AT3G23250.1 45.089 224 102 5 1 203 1 224 5.11e-60 192
MsaG020103 AT1G06180.1 48.241 199 89 3 1 199 1 185 2.84e-58 186
MsaG020103 AT4G28110.1 65.812 117 40 0 1 117 1 117 2.39e-56 182
MsaG020103 AT4G38620.1 51.948 154 72 1 1 154 1 152 6.42e-55 179
MsaG020103 AT3G02940.2 63.248 117 43 0 1 117 1 117 3.08e-54 178
MsaG020103 AT4G21440.1 63.248 117 43 0 1 117 1 117 3.69e-54 179
MsaG020103 AT5G16770.4 62.393 117 44 0 1 117 1 117 7.22e-54 177
MsaG020103 AT5G16770.3 62.393 117 44 0 1 117 1 117 7.22e-54 177
MsaG020103 AT3G02940.1 63.248 117 43 0 1 117 1 117 8.05e-54 177
MsaG020103 AT3G02940.3 63.248 117 43 0 1 117 1 117 8.05e-54 177
MsaG020103 AT3G61250.1 64.957 117 41 0 1 117 1 117 8.58e-54 177
MsaG020103 AT3G01140.2 65.812 117 40 0 1 117 1 117 1.14e-53 177
MsaG020103 AT5G16770.1 62.393 117 44 0 1 117 1 117 1.63e-53 177
MsaG020103 AT5G16770.2 62.393 117 44 0 1 117 1 117 1.63e-53 177
MsaG020103 AT1G79180.1 59.055 127 52 0 2 128 4 130 4.27e-53 174
MsaG020103 AT3G13540.1 43.602 211 97 4 4 198 15 219 8.26e-53 172
MsaG020103 AT5G15310.1 64.103 117 42 0 1 117 1 117 9.32e-53 175
MsaG020103 AT5G15310.2 64.103 117 42 0 1 117 1 117 1.10e-52 174
MsaG020103 AT5G15310.4 63.559 118 43 0 1 118 1 118 1.58e-52 172
MsaG020103 AT5G10280.1 62.393 117 44 0 1 117 1 117 6.03e-52 173
MsaG020103 AT1G22640.1 40.566 212 95 3 1 198 1 195 7.16e-52 170
MsaG020103 AT3G01140.1 64.957 117 41 0 1 117 44 160 9.46e-52 174
MsaG020103 AT1G16490.1 61.404 114 44 0 2 115 4 117 1.16e-51 170
MsaG020103 AT4G05100.1 62.712 118 43 1 1 117 1 118 1.78e-51 171
MsaG020103 AT2G16720.1 60.684 117 46 0 1 117 1 117 2.21e-51 169
MsaG020103 AT5G16600.1 44.041 193 92 4 1 186 1 184 3.46e-51 171
MsaG020103 AT1G74430.1 65.217 115 40 0 1 115 1 115 3.96e-51 169
MsaG020103 AT4G12350.1 41.919 198 113 1 1 198 1 196 4.82e-51 169
MsaG020103 AT5G65230.1 61.538 117 45 0 1 117 1 117 5.25e-51 170
MsaG020103 AT1G34670.1 60.684 117 46 0 1 117 1 117 1.01e-50 171
MsaG020103 AT4G22680.1 60.684 117 46 0 1 117 1 117 1.29e-50 167
MsaG020103 AT1G66230.1 61.739 115 44 0 1 115 1 115 1.64e-50 167
MsaG020103 AT1G35515.1 56.198 121 53 0 1 121 1 121 1.83e-50 165
MsaG020103 AT1G74080.1 64.035 114 41 0 1 114 1 114 3.81e-50 168
MsaG020103 AT5G07690.1 57.851 121 51 0 1 121 1 121 9.36e-50 167
MsaG020103 AT5G60890.1 60.870 115 45 0 1 115 1 115 1.18e-49 166
MsaG020103 AT4G17785.2 59.322 118 47 1 1 117 1 118 1.18e-49 167
MsaG020103 AT4G09460.1 58.120 117 49 0 1 117 1 117 1.19e-49 164
MsaG020103 AT4G01680.3 54.730 148 55 2 1 136 1 148 1.19e-49 164
MsaG020103 AT4G17785.1 59.322 118 47 1 1 117 1 118 1.26e-49 167
MsaG020103 AT1G56160.1 60.526 114 45 0 2 115 4 117 1.36e-49 166
MsaG020103 AT4G34990.1 51.250 160 66 2 1 160 1 148 1.89e-49 164
MsaG020103 AT5G07700.1 57.851 121 51 0 1 121 1 121 2.14e-49 166
MsaG020103 AT5G07700.2 57.851 121 51 0 1 121 1 121 2.14e-49 166
MsaG020103 AT3G28470.1 48.447 161 79 1 1 157 1 161 2.98e-49 165
MsaG020103 AT4G01680.1 54.730 148 55 2 1 136 1 148 3.34e-49 166
MsaG020103 AT5G56110.1 60.000 115 46 0 1 115 1 115 3.89e-49 165
MsaG020103 AT1G18710.1 62.609 115 43 0 1 115 1 115 7.50e-49 163
MsaG020103 AT5G26660.1 61.739 115 44 0 1 115 1 115 1.21e-48 165
MsaG020103 AT1G18570.1 61.864 118 44 1 1 117 1 118 1.49e-48 164
MsaG020103 AT5G61420.2 56.198 121 53 0 1 121 1 121 1.54e-48 165
MsaG020103 AT1G09540.1 45.699 186 95 1 1 186 1 180 1.73e-48 165
MsaG020103 AT3G62610.1 60.870 115 45 0 1 115 1 115 2.70e-48 164
MsaG020103 AT5G62320.1 57.724 123 45 2 2 117 3 125 3.23e-48 160
MsaG020103 AT3G12820.1 59.130 115 47 0 3 117 5 119 4.33e-48 160
MsaG020103 AT5G14340.1 58.261 115 48 0 1 115 13 127 4.62e-48 161
MsaG020103 AT1G08810.1 49.020 153 76 2 1 152 1 152 1.17e-47 160
MsaG020103 AT1G57560.2 57.265 117 50 0 1 117 1 117 2.29e-47 159
MsaG020103 AT1G57560.1 57.265 117 50 0 1 117 1 117 2.31e-47 160
MsaG020103 AT3G47600.1 58.261 115 48 0 1 115 1 115 3.36e-47 160
MsaG020103 AT2G47460.1 59.130 115 47 0 1 115 1 115 4.80e-47 161
MsaG020103 AT1G79180.2 46.875 160 52 1 2 128 4 163 6.73e-47 159
MsaG020103 AT5G54230.1 59.829 117 47 0 1 117 1 117 9.93e-47 159
MsaG020103 AT5G49330.1 59.130 115 47 0 1 115 1 115 1.46e-46 159
MsaG020103 AT3G13890.2 57.265 117 50 0 1 117 1 117 2.63e-46 159
MsaG020103 AT5G57620.1 44.253 174 86 3 1 163 1 174 3.05e-46 158
MsaG020103 AT3G28910.1 58.261 115 48 0 1 115 1 115 3.51e-46 157
MsaG020103 AT1G74650.1 57.265 117 50 0 1 117 1 117 4.03e-46 157
MsaG020103 AT5G62470.2 57.391 115 49 0 1 115 1 115 7.14e-46 157
MsaG020103 AT3G49690.1 57.143 119 50 1 1 118 1 119 8.14e-46 156
MsaG020103 AT4G01680.2 50.625 160 55 3 1 136 1 160 9.64e-46 157
MsaG020103 AT5G14750.1 64.078 103 37 0 13 115 17 119 1.24e-45 152
MsaG020103 AT3G12720.1 46.809 141 58 1 7 147 17 140 5.98e-45 154
MsaG020103 AT5G23000.1 55.085 118 52 1 1 117 1 118 2.04e-44 153
MsaG020103 AT5G62470.1 57.391 115 48 1 1 115 1 114 2.37e-44 154
MsaG020103 AT5G40330.1 63.107 103 38 0 13 115 13 115 3.34e-44 149
MsaG020103 AT5G65790.1 55.462 119 52 1 1 118 1 119 4.10e-44 154
MsaG020103 AT3G27920.1 55.085 118 53 0 13 130 15 132 4.90e-44 149
MsaG020103 AT4G37780.1 53.390 118 54 1 1 117 1 118 1.35e-43 150
MsaG020103 AT2G36890.1 55.932 118 51 1 1 117 1 118 1.63e-43 150
MsaG020103 AT5G35550.1 60.714 112 44 0 4 115 6 117 1.97e-43 149
MsaG020103 AT3G13890.1 53.175 126 50 1 1 117 1 126 2.57e-43 151
MsaG020103 AT2G36890.2 55.932 118 51 1 1 117 42 159 2.87e-43 150
MsaG020103 AT1G63910.1 53.913 115 53 0 1 115 1 115 3.02e-43 151
MsaG020103 AT5G12870.1 63.462 104 38 0 12 115 18 121 4.02e-43 148
MsaG020103 AT4G13480.1 58.974 117 48 0 13 129 7 123 7.43e-42 144
MsaG020103 AT3G24310.1 57.143 119 51 0 11 129 17 135 1.11e-41 144
MsaG020103 AT3G08500.1 59.259 108 44 0 8 115 26 133 3.11e-41 145
MsaG020103 AT3G11440.2 56.075 107 47 0 9 115 38 144 4.18e-41 147
MsaG020103 AT5G06100.1 55.556 108 48 0 8 115 28 135 5.40e-41 147
MsaG020103 AT5G52600.1 61.111 108 42 0 9 116 9 116 7.59e-41 140
MsaG020103 AT2G32460.1 54.464 112 51 0 4 115 10 121 1.38e-40 147
MsaG020103 AT3G11440.3 56.075 107 47 0 9 115 38 144 1.53e-40 147
MsaG020103 AT3G11440.4 56.075 107 47 0 9 115 38 144 1.53e-40 147
MsaG020103 AT3G11440.1 56.075 107 47 0 9 115 38 144 1.53e-40 147
MsaG020103 AT4G26930.1 58.252 103 43 0 12 114 19 121 1.60e-40 144
MsaG020103 AT5G06100.5 55.556 108 48 0 8 115 28 135 1.84e-40 147
MsaG020103 AT5G06100.2 55.556 108 48 0 8 115 28 135 1.84e-40 147
MsaG020103 AT5G06100.3 55.556 108 48 0 8 115 28 135 1.84e-40 147
MsaG020103 AT5G06100.4 55.556 108 48 0 8 115 28 135 1.84e-40 147
MsaG020103 AT2G32460.2 57.143 105 45 0 11 115 5 109 2.05e-40 146
MsaG020103 AT3G30210.1 49.650 143 63 2 11 152 26 160 2.28e-40 141
MsaG020103 AT5G55020.1 60.194 103 41 0 12 114 26 128 3.87e-40 146
MsaG020103 AT3G27810.1 59.223 103 42 0 12 114 20 122 2.63e-39 137
MsaG020103 AT3G01530.1 58.252 103 43 0 12 114 25 127 2.70e-39 136
MsaG020103 AT5G40350.1 58.491 106 44 0 12 117 17 122 3.23e-39 136
MsaG020103 AT3G48920.1 56.604 106 46 0 9 114 15 120 6.65e-39 137
MsaG020103 AT1G48000.1 56.190 105 46 0 12 116 32 136 8.46e-39 136
MsaG020103 AT1G66370.1 35.865 237 134 5 1 225 1 231 8.58e-39 136
MsaG020103 AT1G68320.1 58.095 105 44 0 12 116 19 123 1.80e-38 136
MsaG020103 AT2G26960.1 56.604 106 46 0 9 114 17 122 3.17e-38 139
MsaG020103 AT5G52260.1 54.783 115 52 0 1 115 1 115 4.88e-38 135
MsaG020103 AT1G25340.1 58.654 104 43 0 13 116 19 122 9.66e-38 134
MsaG020103 AT3G46130.1 55.660 106 47 0 11 116 8 113 2.67e-37 132
MsaG020103 AT2G47190.1 53.211 109 51 0 8 116 16 124 3.39e-37 133
MsaG020103 AT4G25560.1 53.913 115 51 1 1 115 1 113 3.88e-37 133
MsaG020103 AT5G59780.3 55.769 104 46 0 13 116 9 112 8.69e-37 130
MsaG020103 AT1G66380.1 60.952 105 41 0 11 115 7 111 3.25e-35 124
MsaG020103 AT3G06490.1 55.963 109 48 0 8 116 15 123 4.37e-35 129
MsaG020103 AT5G49620.1 43.827 162 80 2 12 173 26 176 1.54e-34 127
MsaG020103 AT1G56650.1 47.651 149 74 2 11 157 7 153 1.90e-34 125
MsaG020103 AT1G66390.1 41.584 202 108 5 11 203 7 207 2.74e-34 124
MsaG020103 AT5G14750.3 64.130 92 24 2 24 115 3 85 5.79e-34 121
MsaG020103 AT5G35550.2 71.053 76 22 0 40 115 45 120 5.88e-34 124
MsaG020103 AT1G25340.2 55.769 104 41 1 13 116 19 117 3.69e-33 122
MsaG020103 AT1G25340.3 55.769 104 41 1 13 116 19 117 7.34e-33 122
MsaG020103 AT3G53200.1 50.000 104 52 0 12 115 9 112 1.01e-32 120
MsaG020103 AT5G26660.2 70.423 71 21 0 45 115 14 84 8.99e-32 120
MsaG020103 AT5G49620.2 40.341 176 80 3 12 173 26 190 7.37e-31 117
MsaG020103 AT3G12820.2 67.143 70 23 0 48 117 2 71 1.92e-30 113
MsaG020103 AT2G26950.1 41.985 131 71 2 9 136 13 141 4.40e-30 116
MsaG020103 AT3G60460.1 47.826 115 59 1 3 116 2 116 6.44e-30 114
MsaG020103 AT3G47600.2 55.435 92 37 1 24 115 22 109 2.47e-29 113
MsaG020103 AT3G27810.2 62.500 72 27 0 43 114 2 73 2.76e-29 109
MsaG020103 AT3G23250.2 40.719 167 78 5 58 203 1 167 2.90e-29 111
MsaG020103 AT3G46130.3 63.014 73 27 0 44 116 9 81 5.05e-29 110
MsaG020103 AT4G18770.1 45.794 107 57 1 9 115 212 317 6.97e-29 114
MsaG020103 AT5G59780.2 63.889 72 26 0 45 116 20 91 7.34e-29 109
MsaG020103 AT3G46130.4 63.889 72 26 0 45 116 20 91 9.03e-29 110
MsaG020103 AT3G27785.1 41.176 136 72 3 9 143 184 312 1.16e-28 113
MsaG020103 AT5G40350.2 63.014 73 27 0 45 117 5 77 1.60e-28 107
MsaG020103 AT3G09230.1 49.541 109 46 2 14 118 55 158 4.42e-28 111
MsaG020103 AT5G67300.1 49.020 102 51 1 14 115 6 106 2.27e-27 107
MsaG020103 AT1G17950.1 50.000 104 49 2 14 116 5 106 3.05e-27 106
MsaG020103 AT5G11510.3 47.059 102 53 1 14 115 81 181 3.41e-27 111
MsaG020103 AT5G11510.3 36.000 100 62 2 14 112 29 127 2.57e-14 73.2
MsaG020103 AT5G11510.1 47.059 102 53 1 14 115 81 181 3.41e-27 111
MsaG020103 AT5G11510.1 36.000 100 62 2 14 112 29 127 2.57e-14 73.2
MsaG020103 AT5G11510.4 47.059 102 53 1 14 115 81 181 3.41e-27 111
MsaG020103 AT5G11510.4 36.000 100 62 2 14 112 29 127 2.57e-14 73.2
MsaG020103 AT4G33450.1 44.068 118 60 2 3 120 13 124 4.68e-27 105
MsaG020103 AT5G11510.2 47.059 102 53 1 14 115 81 181 4.76e-27 110
MsaG020103 AT5G11510.2 36.000 100 62 2 14 112 29 127 2.92e-14 73.2
MsaG020103 AT5G11510.5 47.059 102 53 1 14 115 81 181 5.69e-27 110
MsaG020103 AT5G11510.5 36.000 100 62 2 14 112 29 127 3.11e-14 72.8
MsaG020103 AT1G69560.1 47.222 108 54 2 9 115 102 207 5.77e-27 107
MsaG020103 AT1G69560.2 47.222 108 54 2 9 115 118 223 6.82e-27 107
MsaG020103 AT5G58850.1 45.631 103 53 2 14 115 105 205 7.32e-27 108
MsaG020103 AT5G02320.3 37.566 189 101 6 14 197 67 243 1.13e-26 108
MsaG020103 AT5G02320.1 37.566 189 101 6 14 197 127 303 1.18e-26 108
MsaG020103 AT5G02320.2 37.566 189 101 6 14 197 127 303 1.18e-26 108
MsaG020103 AT3G50060.1 41.880 117 67 1 14 130 6 121 2.07e-26 105
MsaG020103 AT5G11050.1 30.469 256 138 8 14 239 105 350 2.22e-26 107
MsaG020103 AT5G40360.1 43.478 115 62 2 1 114 145 257 2.33e-26 106
MsaG020103 AT4G37260.1 47.573 103 53 1 14 116 13 114 3.28e-26 105
MsaG020103 AT3G09370.1 30.709 254 143 8 14 252 130 365 5.41e-26 107
MsaG020103 AT3G09370.2 30.709 254 143 8 14 252 135 370 5.89e-26 106
MsaG020103 AT3G09370.3 30.709 254 143 8 14 252 143 378 7.09e-26 106
MsaG020103 AT1G26780.1 48.544 103 50 2 14 115 98 198 8.88e-26 103
MsaG020103 AT1G26780.2 48.544 103 50 2 14 115 98 198 1.02e-25 104
MsaG020103 AT3G53200.2 59.155 71 29 0 45 115 9 79 1.37e-25 100
MsaG020103 AT3G55730.1 37.037 162 78 4 14 156 56 212 2.08e-25 104
MsaG020103 AT2G23290.1 46.602 103 54 1 14 116 13 114 2.67e-25 102
MsaG020103 AT1G73410.1 51.456 103 47 2 14 115 6 106 3.83e-25 100
MsaG020103 AT1G73410.2 51.456 103 47 2 14 115 6 106 1.33e-24 98.2
MsaG020103 AT5G14750.4 70.690 58 17 0 58 115 1 58 1.39e-24 96.3
MsaG020103 AT5G14750.2 70.690 58 17 0 58 115 1 58 1.39e-24 96.3
MsaG020103 AT1G66380.3 65.753 73 25 0 43 115 6 78 1.57e-24 95.1
MsaG020103 AT2G39880.1 44.954 109 51 2 14 118 50 153 4.32e-24 100
MsaG020103 AT5G17800.1 40.476 126 68 2 14 139 93 211 5.18e-24 99.4
MsaG020103 AT4G32730.5 44.340 106 50 2 14 115 87 187 1.15e-23 100
MsaG020103 AT4G32730.5 34.513 113 72 2 14 125 35 146 1.67e-13 70.9
MsaG020103 AT4G32730.4 44.340 106 50 2 14 115 87 187 1.15e-23 100
MsaG020103 AT4G32730.4 34.513 113 72 2 14 125 35 146 1.67e-13 70.9
MsaG020103 AT4G32730.3 44.340 106 50 2 14 115 87 187 1.15e-23 100
MsaG020103 AT4G32730.3 34.513 113 72 2 14 125 35 146 1.67e-13 70.9
MsaG020103 AT4G32730.2 44.340 106 50 2 14 115 87 187 1.15e-23 100
MsaG020103 AT4G32730.2 34.513 113 72 2 14 125 35 146 1.67e-13 70.9
MsaG020103 AT4G32730.1 44.118 102 56 1 14 115 87 187 1.38e-23 100
MsaG020103 AT4G32730.1 34.513 113 72 2 14 125 35 146 1.67e-13 70.9
MsaG020103 AT3G29020.1 42.157 102 58 1 14 115 65 165 1.59e-23 96.3
MsaG020103 AT3G29020.2 42.157 102 58 1 14 115 67 167 1.87e-23 97.4
MsaG020103 AT1G22640.3 61.667 60 23 0 58 117 1 60 6.39e-23 93.6
MsaG020103 AT2G25230.1 43.750 112 58 3 9 119 21 128 7.54e-23 94.4
MsaG020103 AT1G66380.2 57.317 82 35 0 11 92 7 88 1.68e-22 89.7
MsaG020103 AT1G71030.2 56.716 67 29 0 51 117 5 71 4.46e-22 90.9
MsaG020103 AT1G71030.1 56.716 67 29 0 51 117 19 85 5.81e-22 90.9
MsaG020103 AT1G18960.1 42.276 123 56 5 6 121 4 118 6.36e-22 93.2
MsaG020103 AT5G39700.1 42.400 125 55 3 9 120 51 171 3.09e-21 89.0
MsaG020103 AT2G37630.1 38.889 126 69 2 17 134 7 132 5.15e-20 89.0
MsaG020103 AT5G40430.1 41.071 112 60 4 9 119 49 155 2.37e-19 85.5
MsaG020103 AT4G00540.2 40.541 111 54 3 12 115 101 206 1.35e-18 85.1
MsaG020103 AT4G00540.2 35.000 120 70 2 14 125 46 165 1.41e-13 70.5
MsaG020103 AT4G00540.1 40.541 111 54 3 12 115 99 204 2.17e-18 84.7
MsaG020103 AT4G00540.1 35.000 120 70 2 14 125 44 163 1.71e-13 70.5
MsaG020103 AT1G14350.2 39.091 110 64 2 16 124 27 134 1.45e-16 79.3
MsaG020103 AT1G14350.1 39.091 110 64 2 16 124 27 134 1.45e-16 79.3
MsaG020103 AT3G18100.1 39.583 96 57 1 13 108 545 639 3.26e-16 79.0
MsaG020103 AT3G18100.3 39.583 96 57 1 13 108 497 591 4.97e-16 78.2
MsaG020103 AT3G18100.4 39.583 96 57 1 13 108 384 478 6.61e-16 77.8
MsaG020103 AT3G18100.2 39.175 97 58 1 13 109 332 427 9.48e-16 77.4
MsaG020103 AT2G02820.1 38.182 110 65 2 16 124 32 139 9.80e-16 77.0
MsaG020103 AT2G02820.3 39.091 110 64 2 16 124 32 139 1.30e-15 75.9
MsaG020103 AT2G02820.2 38.182 110 65 2 16 124 32 139 1.31e-15 76.6
MsaG020103 AT5G59780.1 59.574 47 19 0 70 116 1 47 4.79e-14 68.9
MsaG020103 AT3G46130.2 59.574 47 19 0 70 116 1 47 7.14e-14 68.9
MsaG020103 AT4G25560.2 60.000 45 18 0 71 115 3 47 1.66e-12 65.5

Find 57 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTTCTTTGGATGATTT+TGG 0.164698 4:-44593468 MsaT020103.1:CDS
TTGAGGAGTAATTTGGTAAT+TGG 0.211329 4:+44593578 None:intergenic
AGATCACAATTCCACTTCTT+TGG 0.250501 4:-44593478 MsaT020103.1:CDS
GGCCATTGGTGTCTGAGATT+TGG 0.260126 4:+44593547 None:intergenic
ATTTCACTAGATGATGAAAA+TGG 0.273660 4:+44593516 None:intergenic
GATGATGAAAATGGGGATAA+AGG 0.281197 4:+44593525 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4:-44594039 MsaT020103.1:CDS
AACTGGATTGAGGAGTAATT+TGG 0.303507 4:+44593571 None:intergenic
AACCATTGCGGCTGAGTTAC+CGG 0.309509 4:-44593730 MsaT020103.1:CDS
TAGTATATGACAAGGATATT+TGG 0.309668 4:-44593200 MsaT020103.1:CDS
GCCATTGGTGTCTGAGATTT+GGG 0.312832 4:+44593548 None:intergenic
CGACAACTCCCTAAGTTTGC+AGG 0.342502 4:-44594003 MsaT020103.1:intron
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4:-44594026 MsaT020103.1:CDS
TGACAAAGCTTTCGGCAGTA+TGG 0.355347 4:+44593361 None:intergenic
CTATATTTACCTGCAAACTT+AGG 0.368822 4:+44593994 None:intergenic
TTTGTCATGGATAATGATTT+TGG 0.369289 4:-44593345 MsaT020103.1:CDS
ACTTCATTATCTGTTCTTCC+CGG 0.394324 4:+44593711 None:intergenic
ATGATGAAAATGGGGATAAA+GGG 0.400273 4:+44593526 None:intergenic
ATTATCCATGACAAAGCTTT+CGG 0.407712 4:+44593353 None:intergenic
CATGGACTGCTGAAGAAGAT+AGG 0.410291 4:-44594068 MsaT020103.1:CDS
TTAGGTGGCTGAATTATCTA+AGG 0.420573 4:-44593836 MsaT020103.1:CDS
TATATTTACCTGCAAACTTA+GGG 0.430529 4:+44593995 None:intergenic
TTTCACTAGATGATGAAAAT+GGG 0.434641 4:+44593517 None:intergenic
GGTGTCTGAGATTTGGGAAC+TGG 0.438068 4:+44593554 None:intergenic
CACTGTTCCACTTGATGTGT+TGG 0.453293 4:+44593389 None:intergenic
ATGTCACTAGATATGGTTGC+TGG 0.454705 4:-44594032 MsaT020103.1:CDS
GAGATTTGGGAACTGGATTG+AGG 0.491808 4:+44593561 None:intergenic
ACCAAAATCATCCAAAGAAG+TGG 0.496803 4:+44593467 None:intergenic
ACTCCTTCTTGTGACAAAAG+TGG 0.498555 4:-44594105 MsaT020103.1:CDS
CTAAGGCCTAATATCAAAAG+AGG 0.501825 4:-44593819 MsaT020103.1:CDS
AGATTCATTTATAGAAGATG+TGG 0.523349 4:-44593439 MsaT020103.1:CDS
TTTCAGGTCTTTCAAGGTGT+GGG 0.533782 4:-44593872 MsaT020103.1:intron
ATTTCAGGTCTTTCAAGGTG+TGG 0.533848 4:-44593873 MsaT020103.1:intron
TCTTGAGAGAAGTGTGCCAA+TGG 0.538235 4:+44593682 None:intergenic
ACTACTGATACCTTTGTCGT+TGG 0.538456 4:-44593241 MsaT020103.1:CDS
AATCTTTCCAACACATCAAG+TGG 0.540288 4:-44593396 MsaT020103.1:CDS
TCCCGGTAACTCAGCCGCAA+TGG 0.540711 4:+44593728 None:intergenic
ACCATTGCGGCTGAGTTACC+GGG 0.548881 4:-44593729 MsaT020103.1:CDS
ATAATGAAGTGAAGAACCAT+TGG 0.556377 4:-44593698 MsaT020103.1:CDS
GGATATATCTCTCCCTTGTG+TGG 0.558281 4:+44593599 None:intergenic
GTGGGAAGAGTTGTAGACTT+AGG 0.560267 4:-44593854 MsaT020103.1:CDS
AAAGGTATCAGTAGTTCAGT+TGG 0.561036 4:+44593249 None:intergenic
AAACTTTACTCAACAAGAAG+AGG 0.563987 4:-44593796 MsaT020103.1:CDS
TACTGCCGAAAGCTTTGTCA+TGG 0.564425 4:-44593358 MsaT020103.1:CDS
AAATGGGGATAAAGGGCCAT+TGG 0.578413 4:+44593533 None:intergenic
GTGGAATGAGGAAAGGAACA+TGG 0.591827 4:-44594086 MsaT020103.1:CDS
GACAAAAGTGGAATGAGGAA+AGG 0.594720 4:-44594093 MsaT020103.1:CDS
CTTGTGACAAAAGTGGAATG+AGG 0.600030 4:-44594098 MsaT020103.1:CDS
TTCACTAGATGATGAAAATG+GGG 0.623589 4:+44593518 None:intergenic
GGAATTGTGATCTAAAGATG+TGG 0.642475 4:+44593488 None:intergenic
TCAGTAGTTCAGTTGGAACG+AGG 0.643508 4:+44593256 None:intergenic
GAATAGATGGTCAACCATTG+CGG 0.644939 4:-44593742 MsaT020103.1:CDS
GACATAATTGAATCCACACA+AGG 0.645918 4:-44593612 MsaT020103.1:CDS
TCCCAAATCTCAGACACCAA+TGG 0.651151 4:-44593549 MsaT020103.1:CDS
CAGTAGTTCAGTTGGAACGA+GGG 0.652480 4:+44593257 None:intergenic
GGAAGAGTTGTAGACTTAGG+TGG 0.671039 4:-44593851 MsaT020103.1:CDS
ACATAATTGAATCCACACAA+GGG 0.713140 4:-44593611 MsaT020103.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 44593194 44594136 44593194 ID=MsaG020103
Chr4 mRNA 44593194 44594136 44593194 ID=MsaT020103.1;Parent=MsaG020103
Chr4 exon 44593194 44593888 44593194 ID=MsaT020103.1.exon2;Parent=MsaT020103.1
Chr4 CDS 44593194 44593888 44593194 ID=cds.MsaT020103.1;Parent=MsaT020103.1
Chr4 exon 44594004 44594136 44594004 ID=MsaT020103.1.exon1;Parent=MsaT020103.1
Chr4 CDS 44594004 44594136 44594004 ID=cds.MsaT020103.1;Parent=MsaT020103.1
Gene Sequence

>MsaT020103.1

ATGGCAAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGAACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGACAACTCCCTAAGTTTGCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGACTTAGGTGGCTGAATTATCTAAGGCCTAATATCAAAAGAGGAAACTTTACTCAACAAGAAGAGGAGTTGATTATCAGAATGCATAAAAAGCTTGGGAATAGATGGTCAACCATTGCGGCTGAGTTACCGGGAAGAACAGATAATGAAGTGAAGAACCATTGGCACACTTCTCTCAAGAAGAGAGCTATAGATAACATAGTCACGAATGAAGAAACGAAATCAAAAGACATAATTGAATCCACACAAGGGAGAGATATATCCAATTACCAAATTACTCCTCAATCCAGTTCCCAAATCTCAGACACCAATGGCCCTTTATCCCCATTTTCATCATCTAGTGAAATCACTTCCACATCTTTAGATCACAATTCCACTTCTTTGGATGATTTTGGTTTTCTAGATTCATTTATAGAAGATGTGGATGAAAGTTTTTGGCTTCATAATCTTTCCAACACATCAAGTGGAACAGTGCAAAACCATACTGCCGAAAGCTTTGTCATGGATAATGATTTTGGAAGCTTTTTAGATGCTTACAAGGTGTCAACAGTTGATAGTTTTTGGACATATGAGGTTGACATGTCCCTCGTTCCAACTGAACTACTGATACCTTTGTCGTTGGAATCTGAAAATTTTTCTATAGTATATGACAAGGATATTTGGAGTTGA

Protein sequence

>MsaT020103.1

MARTPSCDKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSKDIIESTQGRDISNYQITPQSSSQISDTNGPLSPFSSSSEITSTSLDHNSTSLDDFGFLDSFIEDVDESFWLHNLSNTSSGTVQNHTAESFVMDNDFGSFLDAYKVSTVDSFWTYEVDMSLVPTELLIPLSLESENFSIVYDKDIWS*