AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG020105

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020105 MtrunA17_Chr4g0022911 84.899 298 29 4 1 289 1 291 2.38e-174 483
MsaG020105 MtrunA17_Chr4g0022901 83.793 290 28 3 1 289 1 272 2.72e-165 459
MsaG020105 MtrunA17_Chr4g0022931 76.712 292 45 6 1 289 1 272 1.41e-143 404
MsaG020105 MtrunA17_Chr2g0323351 41.479 311 96 10 1 289 1 247 5.47e-70 217
MsaG020105 MtrunA17_Chr1g0187761 50.249 201 88 4 1 200 1 190 5.43e-58 186
MsaG020105 MtrunA17_Chr1g0167691 47.525 202 89 4 1 200 1 187 2.79e-56 182
MsaG020105 MtrunA17_Chr1g0167661 48.804 209 94 7 1 206 1 199 4.55e-56 181
MsaG020105 MtrunA17_Chr7g0274581 47.849 186 89 3 1 186 1 178 8.51e-56 179
MsaG020105 MtrunA17_Chr7g0261281 68.333 120 37 1 1 120 1 119 1.36e-55 181
MsaG020105 MtrunA17_Chr2g0281071 64.407 118 42 0 1 118 1 118 6.82e-54 178
MsaG020105 MtrunA17_Chr4g0048511 62.712 118 44 0 1 118 1 118 4.18e-53 177
MsaG020105 MtrunA17_Chr4g0022881 59.843 127 48 2 1 125 1 126 1.07e-52 172
MsaG020105 MtrunA17_Chr3g0115821 62.712 118 43 1 1 118 1 117 2.19e-52 174
MsaG020105 MtrunA17_Chr2g0323411 66.102 118 39 1 1 118 1 117 3.95e-52 173
MsaG020105 MtrunA17_Chr1g0203411 63.248 117 42 1 1 117 1 116 8.86e-52 171
MsaG020105 MtrunA17_Chr4g0042671 65.517 116 39 1 1 116 1 115 1.25e-51 174
MsaG020105 MtrunA17_Chr4g0039971 62.712 118 43 1 1 118 2 118 4.04e-51 171
MsaG020105 MtrunA17_Chr4g0057031 62.712 118 43 1 1 118 1 117 5.28e-51 169
MsaG020105 MtrunA17_Chr8g0349261 63.025 119 43 1 1 118 1 119 9.90e-51 169
MsaG020105 MtrunA17_Chr5g0410961 58.462 130 53 1 1 130 1 129 1.99e-50 169
MsaG020105 MtrunA17_Chr4g0070611 63.025 119 43 1 1 119 1 118 2.70e-50 168
MsaG020105 MtrunA17_Chr7g0228891 60.345 116 45 1 1 116 1 115 3.31e-50 167
MsaG020105 MtrunA17_Chr3g0110351 56.028 141 55 3 1 137 1 138 3.96e-50 167
MsaG020105 MtrunA17_Chr7g0217741 51.701 147 64 3 1 143 1 144 5.47e-50 167
MsaG020105 MtrunA17_Chr4g0070641 63.025 119 43 1 1 119 1 118 8.41e-50 162
MsaG020105 MtrunA17_Chr4g0022891 62.281 114 42 1 1 114 1 113 8.47e-50 164
MsaG020105 MtrunA17_Chr6g0453471 62.931 116 42 1 1 116 1 115 8.62e-50 168
MsaG020105 MtrunA17_Chr2g0323321 76.344 93 20 2 1 93 1 91 8.72e-50 160
MsaG020105 MtrunA17_Chr5g0434571 62.069 116 43 1 1 116 37 151 1.22e-49 167
MsaG020105 MtrunA17_Chr8g0346561 59.542 131 52 1 1 131 1 130 1.51e-49 166
MsaG020105 MtrunA17_Chr4g0037141 59.664 119 47 1 1 119 1 118 2.57e-49 165
MsaG020105 MtrunA17_Chr7g0275911 62.931 116 42 1 1 116 1 115 2.98e-49 164
MsaG020105 MtrunA17_Chr1g0211161 58.475 118 49 0 1 118 1 118 3.43e-49 162
MsaG020105 MtrunA17_Chr5g0395281 53.191 141 61 2 1 137 1 140 9.49e-49 164
MsaG020105 MtrunA17_Chr4g0068061 60.345 116 45 1 1 116 1 115 2.13e-48 164
MsaG020105 MtrunA17_Chr3g0131121 50.000 162 73 3 1 162 1 154 2.36e-48 162
MsaG020105 MtrunA17_Chr2g0311221 65.455 110 37 1 2 111 4 112 2.66e-48 163
MsaG020105 MtrunA17_Chr1g0193371 62.069 116 43 1 1 116 1 115 4.29e-48 164
MsaG020105 MtrunA17_Chr3g0117091 59.821 112 45 0 7 118 6 117 9.93e-48 162
MsaG020105 MtrunA17_Chr3g0103281 59.483 116 46 1 1 116 1 115 1.27e-47 161
MsaG020105 MtrunA17_Chr8g0385321 60.345 116 45 1 1 116 1 115 1.34e-47 161
MsaG020105 MtrunA17_Chr1g0193801 62.069 116 43 1 1 116 1 115 1.60e-47 163
MsaG020105 MtrunA17_Chr4g0058631 59.322 118 47 1 1 118 1 117 1.87e-47 162
MsaG020105 MtrunA17_Chr7g0270891 62.069 116 43 1 1 116 1 115 2.31e-47 162
MsaG020105 MtrunA17_Chr1g0151941 47.647 170 79 5 1 164 1 166 1.39e-46 157
MsaG020105 MtrunA17_Chr4g0044421 60.345 116 46 0 3 118 2 117 1.41e-46 155
MsaG020105 MtrunA17_Chr5g0435101 59.483 116 46 1 3 118 2 116 1.84e-46 155
MsaG020105 MtrunA17_Chr6g0452271 58.475 118 48 1 1 118 1 117 2.38e-46 159
MsaG020105 MtrunA17_Chr3g0121241 56.780 118 50 1 5 122 35 151 7.06e-46 156
MsaG020105 MtrunA17_Chr5g0417821 64.486 107 38 0 12 118 6 112 7.61e-46 156
MsaG020105 MtrunA17_Chr7g0217221 59.483 116 46 1 1 116 1 115 8.63e-46 155
MsaG020105 MtrunA17_Chr2g0309911 59.821 112 45 0 7 118 5 116 1.17e-45 156
MsaG020105 MtrunA17_Chr1g0194951 54.074 135 59 2 1 133 1 134 2.51e-45 157
MsaG020105 MtrunA17_Chr2g0330041 56.780 118 50 1 1 118 1 117 8.46e-45 156
MsaG020105 MtrunA17_Chr8g0342541 55.085 118 52 1 1 118 1 117 9.33e-45 155
MsaG020105 MtrunA17_Chr4g0055981 62.857 105 39 0 13 117 55 159 2.13e-44 150
MsaG020105 MtrunA17_Chr3g0135311 44.242 165 89 3 1 164 1 163 2.80e-44 153
MsaG020105 MtrunA17_Chr4g0028311 57.143 119 49 2 1 118 1 118 2.97e-44 153
MsaG020105 MtrunA17_Chr8g0342521 54.237 118 53 1 1 118 1 117 4.34e-44 153
MsaG020105 MtrunA17_Chr1g0152011 50.000 132 64 2 1 131 1 131 4.47e-44 152
MsaG020105 MtrunA17_Chr7g0254411 57.759 116 48 1 1 116 1 115 4.94e-44 152
MsaG020105 MtrunA17_Chr4g0060721 56.034 116 50 1 1 116 2 116 5.45e-44 152
MsaG020105 MtrunA17_Chr1g0180391 51.471 136 56 1 13 138 19 154 7.84e-44 149
MsaG020105 MtrunA17_Chr3g0092401 56.897 116 49 1 1 116 2 116 9.11e-44 151
MsaG020105 MtrunA17_Chr8g0342481 56.000 125 49 4 1 121 1 123 9.29e-44 153
MsaG020105 MtrunA17_Chr5g0400821 56.303 119 50 2 1 118 1 118 1.11e-43 151
MsaG020105 MtrunA17_Chr7g0271241 60.000 110 43 1 1 110 1 109 2.09e-43 152
MsaG020105 MtrunA17_Chr2g0328771 62.500 104 39 0 13 116 20 123 2.97e-43 150
MsaG020105 MtrunA17_Chr7g0228231 44.103 195 89 4 13 189 14 206 7.56e-43 145
MsaG020105 MtrunA17_Chr6g0453211 58.559 111 45 1 1 111 1 110 8.29e-43 149
MsaG020105 MtrunA17_Chr7g0264641 55.462 119 51 2 1 118 1 118 1.13e-42 147
MsaG020105 MtrunA17_Chr8g0387421 56.757 111 48 0 6 116 5 115 1.25e-42 148
MsaG020105 MtrunA17_Chr3g0088461 62.264 106 40 0 11 116 20 125 1.77e-42 149
MsaG020105 MtrunA17_Chr5g0434931 59.813 107 43 0 12 118 34 140 1.96e-42 147
MsaG020105 MtrunA17_Chr1g0209661 55.200 125 53 1 13 137 27 148 3.01e-42 147
MsaG020105 MtrunA17_Chr2g0327351 58.036 112 45 2 1 111 1 111 3.87e-42 147
MsaG020105 MtrunA17_Chr5g0397231 58.491 106 44 0 6 111 5 110 5.93e-42 147
MsaG020105 MtrunA17_Chr5g0434911 58.182 110 46 0 9 118 17 126 1.10e-41 145
MsaG020105 MtrunA17_Chr6g0470971 53.543 127 50 1 11 137 12 129 1.13e-41 145
MsaG020105 MtrunA17_Chr4g0054391 49.275 138 68 2 1 137 1 137 1.79e-41 144
MsaG020105 MtrunA17_Chr6g0487491 50.658 152 58 4 1 136 1 151 2.79e-41 143
MsaG020105 MtrunA17_Chr1g0203441 59.615 104 42 0 14 117 14 117 3.27e-41 143
MsaG020105 MtrunA17_Chr7g0240821 40.314 191 99 5 17 194 5 193 4.72e-41 142
MsaG020105 MtrunA17_Chr4g0032401 37.391 230 118 5 13 240 17 222 6.33e-41 144
MsaG020105 MtrunA17_Chr7g0269831 59.829 117 46 1 1 117 1 116 7.87e-41 144
MsaG020105 MtrunA17_Chr5g0434841 56.034 116 51 0 3 118 10 125 9.08e-41 144
MsaG020105 MtrunA17_Chr5g0434831 57.658 111 47 0 8 118 2 112 9.48e-41 140
MsaG020105 MtrunA17_Chr1g0154031 49.612 129 65 0 13 141 76 204 1.14e-40 145
MsaG020105 MtrunA17_Chr1g0168661 55.556 117 52 0 14 130 22 138 1.20e-40 141
MsaG020105 MtrunA17_Chr7g0228991 57.658 111 47 0 8 118 24 134 1.65e-40 142
MsaG020105 MtrunA17_Chr6g0450101 45.087 173 89 4 13 181 14 184 1.88e-40 139
MsaG020105 MtrunA17_Chr3g0080861 50.000 128 63 1 13 139 37 164 2.28e-40 147
MsaG020105 MtrunA17_Chr3g0099131 56.604 106 46 0 11 116 39 144 3.52e-40 146
MsaG020105 MtrunA17_Chr8g0360111 59.434 106 43 0 8 113 20 125 5.04e-40 140
MsaG020105 MtrunA17_Chr1g0194291 47.436 156 67 2 11 160 19 165 5.68e-40 140
MsaG020105 MtrunA17_Chr4g0072751 57.143 112 46 2 1 111 1 111 5.87e-40 142
MsaG020105 MtrunA17_Chr1g0186061 53.846 117 54 0 14 130 21 137 8.48e-40 139
MsaG020105 MtrunA17_Chr8g0354661 58.654 104 43 0 13 116 37 140 8.80e-40 145
MsaG020105 MtrunA17_Chr7g0220341 47.794 136 65 2 8 141 20 151 1.71e-39 139
MsaG020105 MtrunA17_Chr8g0343831 54.310 116 48 1 1 116 1 111 1.94e-39 138
MsaG020105 MtrunA17_Chr2g0327821 39.130 184 95 3 13 196 6 172 7.65e-39 136
MsaG020105 MtrunA17_Chr1g0194301 56.190 105 46 0 13 117 33 137 2.64e-38 136
MsaG020105 MtrunA17_Chr2g0322521 56.364 110 48 0 7 116 23 132 1.26e-36 134
MsaG020105 MtrunA17_Chr4g0042611 58.427 89 36 1 1 89 1 88 2.53e-35 122
MsaG020105 MtrunA17_Chr4g0030881 52.727 110 45 1 14 116 8 117 1.32e-34 125
MsaG020105 MtrunA17_Chr2g0293911 57.143 105 45 0 13 117 24 128 2.98e-34 127
MsaG020105 MtrunA17_Chr1g0192411 51.429 105 51 0 13 117 12 116 1.41e-33 126
MsaG020105 MtrunA17_Chr7g0247131 71.233 73 21 0 44 116 9 81 1.64e-33 123
MsaG020105 MtrunA17_Chr4g0068921 46.479 142 67 1 13 154 24 156 2.83e-33 120
MsaG020105 MtrunA17_Chr5g0440781 48.624 109 53 2 14 121 13 119 9.03e-33 119
MsaG020105 MtrunA17_Chr2g0294811 55.914 93 40 1 1 93 1 92 9.11e-33 117
MsaG020105 MtrunA17_Chr5g0440761 48.624 109 53 2 14 121 13 119 9.37e-33 121
MsaG020105 MtrunA17_Chr5g0441141 48.624 109 53 2 14 121 13 119 1.15e-32 121
MsaG020105 MtrunA17_Chr5g0395221 59.551 89 35 1 1 89 1 88 1.70e-32 115
MsaG020105 MtrunA17_Chr5g0441131 37.748 151 86 2 14 156 10 160 7.00e-32 116
MsaG020105 MtrunA17_Chr8g0342531 55.682 88 39 0 3 90 2 89 5.67e-31 114
MsaG020105 MtrunA17_Chr3g0133601 52.427 103 48 1 15 117 37 138 1.68e-30 114
MsaG020105 MtrunA17_Chr8g0334881 50.000 106 52 1 13 117 10 115 2.03e-30 116
MsaG020105 MtrunA17_Chr5g0429661 49.515 103 49 2 15 116 122 222 4.24e-30 116
MsaG020105 MtrunA17_Chr6g0454921 50.450 111 53 2 15 125 15 123 5.11e-30 112
MsaG020105 MtrunA17_Chr8g0342461 54.839 93 36 3 1 90 1 90 1.41e-29 109
MsaG020105 MtrunA17_Chr4g0008551 39.490 157 67 5 15 145 38 192 1.47e-29 114
MsaG020105 MtrunA17_Chr8g0342511 53.409 88 40 1 1 88 1 87 1.58e-29 107
MsaG020105 MtrunA17_Chr5g0401731 38.365 159 90 2 15 173 15 165 2.05e-29 114
MsaG020105 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 38 122 2.93e-29 108
MsaG020105 MtrunA17_Chr4g0053431 50.000 102 50 1 15 116 5 105 3.04e-29 112
MsaG020105 MtrunA17_Chr4g0013361 39.634 164 90 5 13 170 10 170 4.02e-29 112
MsaG020105 MtrunA17_Chr5g0434901 70.588 68 20 0 47 114 7 74 4.70e-29 107
MsaG020105 MtrunA17_Chr8g0342471 53.763 93 37 3 1 90 1 90 7.24e-29 107
MsaG020105 MtrunA17_Chr6g0480581 50.495 101 49 1 15 115 4 103 4.71e-27 105
MsaG020105 MtrunA17_Chr4g0058991 43.478 115 62 2 3 116 197 309 1.07e-26 108
MsaG020105 MtrunA17_Chr7g0229101 61.972 71 27 0 44 114 3 73 1.73e-26 103
MsaG020105 MtrunA17_Chr7g0229131 43.860 114 62 2 44 155 3 116 2.28e-26 102
MsaG020105 MtrunA17_Chr7g0228531 48.039 102 51 2 15 116 220 319 3.62e-26 106
MsaG020105 MtrunA17_Chr5g0417621 49.515 103 49 2 15 116 134 234 5.34e-26 106
MsaG020105 MtrunA17_Chr7g0238631 48.571 105 51 2 13 116 111 213 6.88e-26 107
MsaG020105 MtrunA17_Chr7g0238631 37.000 100 61 2 15 113 61 159 7.39e-14 71.6
MsaG020105 MtrunA17_Chr3g0117511 42.718 103 56 2 15 116 183 283 1.98e-25 104
MsaG020105 MtrunA17_Chr4g0042501 48.544 103 50 2 15 116 105 205 2.05e-25 104
MsaG020105 MtrunA17_Chr6g0453751 48.936 94 39 2 12 96 19 112 4.53e-25 97.4
MsaG020105 MtrunA17_Chr5g0425591 52.381 84 39 1 14 96 10 93 5.91e-25 95.9
MsaG020105 MtrunA17_Chr3g0139671 45.098 102 55 1 15 116 85 185 1.54e-24 103
MsaG020105 MtrunA17_Chr3g0139671 37.000 100 61 2 15 113 33 131 5.97e-14 72.0
MsaG020105 MtrunA17_Chr1g0157731 45.192 104 56 1 13 116 89 191 1.82e-24 103
MsaG020105 MtrunA17_Chr1g0157731 36.000 100 62 2 15 113 39 137 3.93e-14 72.8
MsaG020105 MtrunA17_Chr6g0460661 36.486 148 85 4 15 161 16 155 3.09e-24 95.9
MsaG020105 MtrunA17_Chr6g0460671 35.714 154 84 3 15 168 99 237 7.54e-24 99.4
MsaG020105 MtrunA17_Chr3g0125801 49.515 103 49 2 15 116 16 116 2.06e-23 97.1
MsaG020105 MtrunA17_Chr5g0437321 44.660 103 48 2 15 113 19 116 2.76e-23 96.7
MsaG020105 MtrunA17_Chr7g0228481 38.849 139 75 4 15 147 220 354 4.27e-23 98.2
MsaG020105 MtrunA17_Chr7g0254261 48.039 102 52 1 15 116 89 189 1.37e-22 95.9
MsaG020105 MtrunA17_Chr7g0233061 36.232 138 74 6 9 144 174 299 2.17e-21 92.4
MsaG020105 MtrunA17_Chr3g0093811 53.425 73 34 0 44 116 13 85 2.22e-21 90.9
MsaG020105 MtrunA17_Chr5g0397841 45.918 98 52 1 13 110 108 204 3.75e-21 92.8
MsaG020105 MtrunA17_Chr7g0228401 42.553 94 51 2 26 119 290 380 4.68e-21 92.8
MsaG020105 MtrunA17_Chr1g0177901 34.532 139 77 5 26 156 4 136 5.40e-20 85.9
MsaG020105 MtrunA17_Chr2g0323331 30.942 223 104 7 89 268 5 220 1.23e-19 87.8
MsaG020105 MtrunA17_Chr7g0238651 43.750 96 52 1 18 111 10 105 4.62e-19 85.9
MsaG020105 MtrunA17_Chr8g0362231 41.284 109 61 2 17 124 24 130 3.80e-17 80.9
MsaG020105 MtrunA17_Chr5g0416341 42.157 102 56 2 17 117 28 127 3.43e-16 78.2
MsaG020105 MtrunA17_Chr1g0193901 45.977 87 45 2 13 97 11 97 2.47e-15 70.9
MsaG020105 MtrunA17_Chr1g0193891 45.977 87 45 2 13 97 11 97 2.47e-15 70.9
MsaG020105 MtrunA17_Chr1g0193871 45.977 87 45 2 13 97 11 97 2.47e-15 70.9
MsaG020105 MtrunA17_Chr1g0193881 45.977 87 45 2 13 97 11 97 2.47e-15 70.9
MsaG020105 MtrunA17_Chr5g0434871 63.636 44 16 0 75 118 2 45 5.50e-15 68.6
MsaG020105 MtrunA17_Chr2g0322831 58.974 39 16 0 71 109 34 72 2.07e-11 58.9
MsaG020105 MtrunA17_Chr7g0233151 29.730 111 72 2 66 172 1 109 4.75e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020105 AT2G31180.1 49.756 205 88 4 1 205 1 190 2.05e-57 185
MsaG020105 AT3G23250.1 38.989 277 140 7 1 249 1 276 1.06e-56 184
MsaG020105 AT1G06180.1 48.990 198 95 3 1 196 1 194 1.20e-55 180
MsaG020105 AT4G28110.1 66.102 118 39 1 1 118 1 117 1.87e-54 178
MsaG020105 AT3G61250.1 65.254 118 40 1 1 118 1 117 5.93e-53 175
MsaG020105 AT4G05100.1 63.559 118 43 0 1 118 1 118 6.48e-53 176
MsaG020105 AT4G38620.1 52.597 154 70 2 1 154 1 151 8.97e-53 174
MsaG020105 AT3G02940.2 63.559 118 42 1 1 118 1 117 1.84e-52 174
MsaG020105 AT4G21440.1 63.559 118 42 1 1 118 1 117 2.25e-52 175
MsaG020105 AT5G16770.4 62.712 118 43 1 1 118 1 117 3.65e-52 174
MsaG020105 AT5G16770.3 62.712 118 43 1 1 118 1 117 3.65e-52 174
MsaG020105 AT3G02940.1 63.559 118 42 1 1 118 1 117 4.35e-52 173
MsaG020105 AT3G02940.3 63.559 118 42 1 1 118 1 117 4.35e-52 173
MsaG020105 AT5G16770.1 62.712 118 43 1 1 118 1 117 7.51e-52 173
MsaG020105 AT5G16770.2 62.712 118 43 1 1 118 1 117 7.51e-52 173
MsaG020105 AT1G22640.1 42.927 205 95 5 1 196 1 192 1.19e-51 170
MsaG020105 AT1G79180.1 59.375 128 51 1 2 129 4 130 3.03e-51 170
MsaG020105 AT3G01140.2 64.407 118 41 1 1 118 1 117 5.86e-51 171
MsaG020105 AT5G15310.1 62.712 118 43 1 1 118 1 117 8.90e-51 170
MsaG020105 AT5G15310.2 62.712 118 43 1 1 118 1 117 1.40e-50 169
MsaG020105 AT5G15310.4 62.185 119 44 1 1 119 1 118 1.43e-50 167
MsaG020105 AT4G17785.2 43.316 187 85 2 1 185 1 168 2.14e-50 170
MsaG020105 AT4G17785.1 43.316 187 85 2 1 185 1 168 2.91e-50 170
MsaG020105 AT5G10280.1 61.864 118 44 1 1 118 1 117 6.22e-50 168
MsaG020105 AT3G13540.1 42.723 213 97 6 4 199 15 219 6.51e-50 166
MsaG020105 AT1G16490.1 61.739 115 43 1 2 116 4 117 6.81e-50 166
MsaG020105 AT4G22680.1 60.169 118 46 1 1 118 1 117 1.67e-49 165
MsaG020105 AT2G16720.1 60.169 118 46 1 1 118 1 117 1.79e-49 165
MsaG020105 AT1G18570.1 61.864 118 45 0 1 118 1 118 2.20e-49 167
MsaG020105 AT4G12350.1 61.864 118 44 1 1 118 1 117 2.30e-49 165
MsaG020105 AT5G65230.1 61.864 118 44 1 1 118 1 117 3.08e-49 166
MsaG020105 AT1G74430.1 63.793 116 41 1 1 116 1 115 4.11e-49 164
MsaG020105 AT1G34670.1 61.017 118 45 1 1 118 1 117 4.17e-49 167
MsaG020105 AT5G16600.1 53.147 143 61 3 1 139 1 141 5.01e-49 166
MsaG020105 AT3G01140.1 63.559 118 42 1 1 118 44 160 5.09e-49 167
MsaG020105 AT1G66230.1 61.207 116 44 1 1 116 1 115 7.40e-49 164
MsaG020105 AT1G74080.1 63.478 115 41 1 1 115 1 114 8.37e-49 165
MsaG020105 AT1G35515.1 57.143 119 50 1 1 119 1 118 3.36e-48 160
MsaG020105 AT5G60890.1 62.069 116 43 1 1 116 1 115 3.51e-48 162
MsaG020105 AT5G07690.1 58.197 122 50 1 1 122 1 121 3.80e-48 164
MsaG020105 AT4G01680.3 49.693 163 71 3 1 159 1 156 6.41e-48 160
MsaG020105 AT4G09460.1 57.627 118 49 1 1 118 1 117 7.27e-48 160
MsaG020105 AT5G07700.1 58.197 122 50 1 1 122 1 121 9.98e-48 162
MsaG020105 AT5G07700.2 58.197 122 50 1 1 122 1 121 9.98e-48 162
MsaG020105 AT4G01680.1 49.693 163 71 3 1 159 1 156 1.98e-47 162
MsaG020105 AT3G62610.1 61.207 116 44 1 1 116 1 115 2.09e-47 162
MsaG020105 AT4G34990.1 52.381 147 62 2 1 140 1 146 2.28e-47 160
MsaG020105 AT1G56160.1 60.000 115 45 1 2 116 4 117 2.63e-47 160
MsaG020105 AT1G18710.1 61.207 116 44 1 1 116 1 115 4.69e-47 159
MsaG020105 AT5G62320.1 58.065 124 44 3 2 118 3 125 4.76e-47 158
MsaG020105 AT5G61420.2 56.557 122 52 1 1 122 1 121 6.14e-47 161
MsaG020105 AT5G56110.1 59.483 116 46 1 1 116 1 115 6.90e-47 160
MsaG020105 AT5G26660.1 61.207 116 44 1 1 116 1 115 7.17e-47 160
MsaG020105 AT5G14340.1 58.621 116 47 1 1 116 13 127 7.21e-47 158
MsaG020105 AT3G28470.1 62.162 111 41 1 1 111 1 110 2.16e-46 158
MsaG020105 AT3G12820.1 59.483 116 46 1 3 118 5 119 2.17e-46 156
MsaG020105 AT1G08810.1 47.399 173 84 4 1 168 1 171 2.48e-46 157
MsaG020105 AT2G47460.1 59.483 116 46 1 1 116 1 115 2.82e-46 159
MsaG020105 AT5G49330.1 59.483 116 46 1 1 116 1 115 5.93e-46 158
MsaG020105 AT3G47600.1 58.621 116 47 1 1 116 1 115 7.09e-46 157
MsaG020105 AT1G57560.1 57.627 118 49 1 1 118 1 117 7.59e-46 157
MsaG020105 AT1G57560.2 57.627 118 49 1 1 118 1 117 8.01e-46 155
MsaG020105 AT5G54230.1 62.264 106 40 0 13 118 12 117 1.11e-45 157
MsaG020105 AT1G09540.1 45.455 187 95 2 1 187 1 180 2.12e-45 157
MsaG020105 AT1G79180.2 47.205 161 51 2 2 129 4 163 3.99e-45 155
MsaG020105 AT1G74650.1 57.627 118 49 1 1 118 1 117 4.11e-45 155
MsaG020105 AT5G14750.1 63.107 103 38 0 14 116 17 119 6.88e-45 151
MsaG020105 AT5G62470.2 57.759 116 48 1 1 116 1 115 1.28e-44 155
MsaG020105 AT5G57620.1 57.143 119 49 2 1 118 1 118 1.74e-44 154
MsaG020105 AT3G49690.1 57.500 120 49 2 1 119 1 119 4.42e-44 152
MsaG020105 AT4G01680.2 46.286 175 71 4 1 159 1 168 5.62e-44 153
MsaG020105 AT3G13890.2 57.522 113 48 0 6 118 5 117 7.81e-44 153
MsaG020105 AT3G28910.1 57.759 116 48 1 1 116 1 115 8.69e-44 152
MsaG020105 AT5G40330.1 62.136 103 39 0 14 116 13 115 1.74e-43 148
MsaG020105 AT3G27920.1 54.237 118 54 0 14 131 15 132 1.93e-43 148
MsaG020105 AT3G12720.1 46.479 142 59 1 7 148 16 140 1.96e-43 150
MsaG020105 AT5G12870.1 57.759 116 49 0 1 116 6 121 3.62e-43 149
MsaG020105 AT5G62470.1 57.759 116 47 2 1 116 1 114 4.53e-43 150
MsaG020105 AT5G35550.1 63.462 104 38 0 13 116 14 117 4.94e-43 148
MsaG020105 AT5G23000.1 55.462 119 51 2 1 118 1 118 1.26e-42 149
MsaG020105 AT4G37780.1 53.782 119 53 2 1 118 1 118 1.58e-42 148
MsaG020105 AT5G65790.1 55.833 120 51 2 1 119 1 119 2.67e-42 149
MsaG020105 AT1G63910.1 56.757 111 48 0 6 116 5 115 4.24e-42 149
MsaG020105 AT2G36890.1 56.303 119 50 2 1 118 1 118 9.74e-42 146
MsaG020105 AT2G36890.2 56.303 119 50 2 1 118 42 159 1.61e-41 146
MsaG020105 AT4G13480.1 58.974 117 48 0 14 130 7 123 1.72e-41 144
MsaG020105 AT3G11440.2 57.407 108 46 0 9 116 37 144 2.28e-41 149
MsaG020105 AT3G24310.1 57.143 119 51 0 12 130 17 135 2.97e-41 144
MsaG020105 AT3G11440.3 57.407 108 46 0 9 116 37 144 8.73e-41 149
MsaG020105 AT3G11440.4 57.407 108 46 0 9 116 37 144 8.73e-41 149
MsaG020105 AT3G11440.1 57.407 108 46 0 9 116 37 144 8.73e-41 149
MsaG020105 AT3G13890.1 53.279 122 48 1 6 118 5 126 8.88e-41 145
MsaG020105 AT4G26930.1 59.223 103 42 0 13 115 19 121 1.10e-40 145
MsaG020105 AT5G06100.1 57.143 105 45 0 12 116 31 135 1.37e-40 146
MsaG020105 AT2G32460.2 57.143 105 45 0 12 116 5 109 2.03e-40 146
MsaG020105 AT2G32460.1 57.143 105 45 0 12 116 17 121 2.37e-40 146
MsaG020105 AT5G06100.5 57.143 105 45 0 12 116 31 135 3.59e-40 146
MsaG020105 AT5G06100.2 57.143 105 45 0 12 116 31 135 3.59e-40 146
MsaG020105 AT5G06100.3 57.143 105 45 0 12 116 31 135 3.59e-40 146
MsaG020105 AT5G06100.4 57.143 105 45 0 12 116 31 135 3.59e-40 146
MsaG020105 AT5G55020.1 60.194 103 41 0 13 115 26 128 3.73e-40 146
MsaG020105 AT3G08500.1 59.615 104 42 0 13 116 30 133 5.42e-40 142
MsaG020105 AT5G40350.1 38.542 192 106 3 13 200 17 200 9.68e-40 138
MsaG020105 AT3G27810.1 60.194 103 41 0 13 115 20 122 1.60e-39 138
MsaG020105 AT3G01530.1 59.223 103 42 0 13 115 25 127 1.67e-39 137
MsaG020105 AT5G52600.1 57.522 113 45 1 7 116 3 115 2.16e-39 137
MsaG020105 AT3G30210.1 48.252 143 65 2 12 153 26 160 8.73e-39 137
MsaG020105 AT1G66370.1 58.095 105 44 0 12 116 7 111 1.51e-38 136
MsaG020105 AT2G47190.1 52.632 114 54 0 4 117 11 124 2.87e-38 136
MsaG020105 AT1G48000.1 55.238 105 47 0 13 117 32 136 4.37e-38 135
MsaG020105 AT3G48920.1 56.863 102 44 0 14 115 19 120 8.83e-38 134
MsaG020105 AT1G68320.1 57.143 105 45 0 13 117 19 123 1.01e-37 135
MsaG020105 AT2G26960.1 58.416 101 42 0 15 115 22 122 1.42e-37 138
MsaG020105 AT4G25560.1 54.310 116 50 1 1 116 1 113 3.07e-37 134
MsaG020105 AT5G52260.1 60.194 103 41 0 14 116 13 115 5.26e-37 132
MsaG020105 AT1G25340.1 57.692 104 44 0 14 117 19 122 7.08e-37 133
MsaG020105 AT3G46130.1 54.717 106 48 0 12 117 8 113 1.58e-36 131
MsaG020105 AT5G59780.3 54.808 104 47 0 14 117 9 112 4.68e-36 129
MsaG020105 AT1G66380.1 60.952 105 41 0 12 116 7 111 3.21e-35 124
MsaG020105 AT3G06490.1 58.095 105 44 0 13 117 19 123 2.01e-34 127
MsaG020105 AT1G66390.1 60.000 105 42 0 12 116 7 111 3.05e-34 125
MsaG020105 AT5G35550.2 71.053 76 22 0 41 116 45 120 4.93e-34 125
MsaG020105 AT1G56650.1 58.095 105 44 0 12 116 7 111 8.48e-34 124
MsaG020105 AT5G49620.1 57.143 105 45 0 13 117 26 130 1.28e-33 125
MsaG020105 AT5G14750.3 63.043 92 25 2 25 116 3 85 3.23e-33 120
MsaG020105 AT3G53200.1 50.962 104 51 0 13 116 9 112 7.08e-33 121
MsaG020105 AT1G25340.2 54.808 104 42 1 14 117 19 117 2.42e-32 120
MsaG020105 AT1G25340.3 54.808 104 42 1 14 117 19 117 4.49e-32 120
MsaG020105 AT5G26660.2 70.423 71 21 0 46 116 14 84 7.69e-32 120
MsaG020105 AT3G12820.2 68.571 70 22 0 49 118 2 71 1.19e-30 114
MsaG020105 AT5G49620.2 50.420 119 45 1 13 117 26 144 5.83e-30 115
MsaG020105 AT2G26950.1 50.515 97 48 0 15 111 18 114 6.55e-30 116
MsaG020105 AT3G60460.1 49.091 110 55 1 9 117 7 116 1.28e-29 114
MsaG020105 AT3G27810.2 63.889 72 26 0 44 115 2 73 1.33e-29 110
MsaG020105 AT3G27785.1 40.690 145 78 3 1 144 175 312 3.52e-29 115
MsaG020105 AT3G47600.2 55.435 92 37 1 25 116 22 109 3.89e-29 113
MsaG020105 AT5G40350.2 36.478 159 89 3 46 200 5 155 4.42e-29 109
MsaG020105 AT4G18770.1 46.296 108 57 1 9 116 211 317 5.52e-29 114
MsaG020105 AT3G46130.3 61.644 73 28 0 45 117 9 81 2.66e-28 108
MsaG020105 AT5G11050.1 32.143 252 135 10 15 244 105 342 4.24e-28 112
MsaG020105 AT5G59780.2 62.500 72 27 0 46 117 20 91 4.39e-28 108
MsaG020105 AT3G46130.4 62.500 72 27 0 46 117 20 91 5.78e-28 108
MsaG020105 AT3G09230.1 49.541 109 46 2 15 119 55 158 9.63e-28 110
MsaG020105 AT5G67300.1 50.000 102 50 1 15 116 6 106 1.42e-27 108
MsaG020105 AT5G11510.3 37.671 146 83 3 13 158 79 216 1.99e-27 112
MsaG020105 AT5G11510.3 37.000 100 61 2 15 113 29 127 8.38e-15 75.1
MsaG020105 AT5G11510.1 37.671 146 83 3 13 158 79 216 1.99e-27 112
MsaG020105 AT5G11510.1 37.000 100 61 2 15 113 29 127 8.38e-15 75.1
MsaG020105 AT5G11510.4 37.671 146 83 3 13 158 79 216 1.99e-27 112
MsaG020105 AT5G11510.4 37.000 100 61 2 15 113 29 127 8.38e-15 75.1
MsaG020105 AT3G23250.2 39.877 163 77 4 59 200 1 163 2.29e-27 106
MsaG020105 AT1G17950.1 50.962 104 48 2 15 117 5 106 2.34e-27 107
MsaG020105 AT5G58850.1 46.602 103 52 2 15 116 105 205 2.56e-27 110
MsaG020105 AT5G11510.2 37.671 146 83 3 13 158 79 216 2.79e-27 111
MsaG020105 AT5G11510.2 37.000 100 61 2 15 113 29 127 1.03e-14 74.7
MsaG020105 AT5G11510.5 37.671 146 83 3 13 158 79 216 2.80e-27 111
MsaG020105 AT5G11510.5 37.000 100 61 2 15 113 29 127 1.19e-14 74.7
MsaG020105 AT4G33450.1 44.538 119 59 2 3 121 13 124 5.27e-27 106
MsaG020105 AT3G50060.1 42.735 117 66 1 15 131 6 121 1.03e-26 106
MsaG020105 AT1G69560.1 47.664 107 53 2 11 116 103 207 1.49e-26 106
MsaG020105 AT4G37260.1 48.544 103 52 1 15 117 13 114 1.81e-26 106
MsaG020105 AT1G69560.2 47.664 107 53 2 11 116 119 223 1.83e-26 106
MsaG020105 AT5G40360.1 47.059 102 51 2 15 115 158 257 3.48e-26 106
MsaG020105 AT1G26780.1 49.515 103 49 2 15 116 98 198 4.88e-26 104
MsaG020105 AT3G55730.1 39.735 151 69 4 15 155 56 194 5.58e-26 106
MsaG020105 AT1G26780.2 49.515 103 49 2 15 116 98 198 5.84e-26 105
MsaG020105 AT3G53200.2 60.563 71 28 0 46 116 9 79 1.02e-25 101
MsaG020105 AT5G02320.1 48.039 102 52 1 15 116 127 227 1.50e-25 106
MsaG020105 AT5G02320.1 38.000 100 60 2 15 113 75 173 1.86e-14 73.9
MsaG020105 AT5G02320.2 48.039 102 52 1 15 116 127 227 1.50e-25 106
MsaG020105 AT5G02320.2 38.000 100 60 2 15 113 75 173 1.86e-14 73.9
MsaG020105 AT3G09370.1 46.729 107 48 2 15 117 130 231 1.51e-25 105
MsaG020105 AT3G09370.1 36.000 100 62 2 15 113 78 176 3.70e-12 66.6
MsaG020105 AT3G09370.2 46.729 107 48 2 15 117 135 236 1.54e-25 105
MsaG020105 AT3G09370.2 36.000 100 62 2 15 113 83 181 3.55e-12 67.0
MsaG020105 AT2G23290.1 47.573 103 53 1 15 117 13 114 1.74e-25 103
MsaG020105 AT5G02320.3 48.039 102 52 1 15 116 67 167 2.13e-25 105
MsaG020105 AT5G02320.3 38.739 111 63 4 7 113 4 113 3.48e-15 75.9
MsaG020105 AT3G09370.3 46.729 107 48 2 15 117 143 244 2.40e-25 105
MsaG020105 AT3G09370.3 36.000 100 62 2 15 113 91 189 3.39e-12 67.0
MsaG020105 AT1G73410.1 52.427 103 46 2 15 116 6 106 1.02e-24 99.8
MsaG020105 AT1G66380.3 65.753 73 25 0 44 116 6 78 1.43e-24 95.5
MsaG020105 AT1G22640.3 40.146 137 61 4 59 186 1 125 2.19e-24 97.8
MsaG020105 AT5G17800.1 46.078 102 54 1 15 116 93 193 2.98e-24 100
MsaG020105 AT1G73410.2 52.427 103 46 2 15 116 6 106 3.18e-24 97.4
MsaG020105 AT2G39880.1 45.872 109 50 2 15 119 50 153 3.33e-24 100
MsaG020105 AT4G32730.5 44.231 104 57 1 13 116 85 187 6.40e-24 102
MsaG020105 AT4G32730.5 35.398 113 71 2 15 126 35 146 5.33e-14 72.8
MsaG020105 AT4G32730.4 44.231 104 57 1 13 116 85 187 6.40e-24 102
MsaG020105 AT4G32730.4 35.398 113 71 2 15 126 35 146 5.33e-14 72.8
MsaG020105 AT4G32730.3 44.231 104 57 1 13 116 85 187 6.40e-24 102
MsaG020105 AT4G32730.3 35.398 113 71 2 15 126 35 146 5.33e-14 72.8
MsaG020105 AT4G32730.2 44.231 104 57 1 13 116 85 187 6.40e-24 102
MsaG020105 AT4G32730.2 35.398 113 71 2 15 126 35 146 5.33e-14 72.8
MsaG020105 AT5G14750.4 68.966 58 18 0 59 116 1 58 7.30e-24 94.7
MsaG020105 AT5G14750.2 68.966 58 18 0 59 116 1 58 7.30e-24 94.7
MsaG020105 AT4G32730.1 44.231 104 57 1 13 116 85 187 7.35e-24 101
MsaG020105 AT4G32730.1 35.398 113 71 2 15 126 35 146 5.30e-14 72.4
MsaG020105 AT3G29020.1 43.137 102 57 1 15 116 65 165 8.03e-24 97.1
MsaG020105 AT3G29020.2 43.137 102 57 1 15 116 67 167 9.17e-24 98.6
MsaG020105 AT2G25230.1 44.248 113 58 3 9 120 20 128 8.04e-23 94.7
MsaG020105 AT1G66380.2 57.317 82 35 0 12 93 7 88 1.20e-22 90.5
MsaG020105 AT1G18960.1 42.857 119 55 4 11 122 6 118 3.36e-22 94.4
MsaG020105 AT1G71030.2 56.716 67 29 0 52 118 5 71 3.47e-22 91.7
MsaG020105 AT1G71030.1 56.716 67 29 0 52 118 19 85 4.71e-22 91.7
MsaG020105 AT5G39700.1 42.520 127 56 3 8 121 49 171 1.68e-21 89.7
MsaG020105 AT2G37630.1 39.683 126 68 2 18 135 7 132 2.50e-20 90.1
MsaG020105 AT5G40430.1 40.833 120 65 4 2 120 41 155 1.89e-19 85.9
MsaG020105 AT4G00540.2 42.593 108 56 3 13 116 101 206 7.71e-19 86.3
MsaG020105 AT4G00540.2 35.833 120 69 2 15 126 46 165 5.91e-14 72.0
MsaG020105 AT4G00540.1 42.593 108 56 3 13 116 99 204 1.29e-18 85.9
MsaG020105 AT4G00540.1 35.833 120 69 2 15 126 44 163 7.55e-14 71.6
MsaG020105 AT1G14350.2 40.000 110 63 2 17 125 27 134 3.91e-17 81.3
MsaG020105 AT1G14350.1 40.000 110 63 2 17 125 27 134 3.91e-17 81.3
MsaG020105 AT3G18100.1 40.625 96 56 1 14 109 545 639 1.17e-16 80.5
MsaG020105 AT3G18100.3 40.625 96 56 1 14 109 497 591 1.86e-16 80.1
MsaG020105 AT3G18100.4 40.625 96 56 1 14 109 384 478 2.14e-16 79.7
MsaG020105 AT3G18100.2 40.206 97 57 1 14 110 332 427 3.26e-16 79.0
MsaG020105 AT2G02820.1 39.091 110 64 2 17 125 32 139 4.37e-16 78.6
MsaG020105 AT2G02820.2 39.091 110 64 2 17 125 32 139 4.65e-16 78.6
MsaG020105 AT2G02820.3 40.000 110 63 2 17 125 32 139 5.65e-16 77.4
MsaG020105 AT5G59780.1 57.447 47 20 0 71 117 1 47 2.07e-13 67.4
MsaG020105 AT3G46130.2 57.447 47 20 0 71 117 1 47 3.03e-13 67.4
MsaG020105 AT4G25560.2 60.870 46 18 0 71 116 2 47 8.14e-13 66.6
MsaG020105 AT1G14350.3 43.478 69 39 0 57 125 23 91 5.21e-11 63.2
MsaG020105 AT1G14350.4 43.478 69 39 0 57 125 23 91 5.21e-11 63.2

Find 62 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTACTTTGGATGATTT+TGG 0.124584 4:-44616327 MsaT020105.1:CDS
CTATAGTATATGATGATATT+TGG 0.196587 4:-44616020 MsaT020105.1:CDS
CGGAGGAGTAATTTGGTAAT+TGG 0.263890 4:+44616437 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4:-44616903 MsaT020105.1:CDS
CGCCAACTTCCCAAGTTTGC+AGG 0.293097 4:-44616867 MsaT020105.1:intron
ATCCATAACAAAACTTTCAT+TGG 0.308172 4:+44616179 None:intergenic
TTTGTTATGGATAACGATTT+TGG 0.329855 4:-44616168 MsaT020105.1:CDS
AACTAGCCGGAGGAGTAATT+TGG 0.335977 4:+44616430 None:intergenic
TTTGTCACATGAAGGAGTTC+TGG 0.338089 4:+44616977 None:intergenic
GATGATGAAAATGGAGATAA+TGG 0.338189 4:+44616384 None:intergenic
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4:+44616570 None:intergenic
AAGATGTGGATGAAAACTTT+TGG 0.346585 4:-44616284 MsaT020105.1:CDS
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4:-44616890 MsaT020105.1:CDS
AATTCACTAGATGATGAAAA+TGG 0.351969 4:+44616375 None:intergenic
CCTTCATGTGACAAAATTAG+TGG 0.383309 4:-44616969 MsaT020105.1:CDS
GACCATTGGTGTCTAAGATC+TGG 0.389533 4:+44616406 None:intergenic
ATATCAATTACCTGCAAACT+TGG 0.403650 4:+44616857 None:intergenic
ATATCACAGTTCCACTACTT+TGG 0.405915 4:-44616337 MsaT020105.1:CDS
TGAGGTGGCTGAATTATCTA+AGG 0.418133 4:-44616695 MsaT020105.1:CDS
CATGGACTGCTGAAGAAGAT+AGG 0.425464 4:-44616932 MsaT020105.1:CDS
ACCATTGCGGCCGAGTTACC+TGG 0.444329 4:-44616588 MsaT020105.1:CDS
ATCTATAGCTCTCTTCTTGA+GGG 0.445379 4:+44616527 None:intergenic
ATGTCACTAGATATGGTTGC+TGG 0.454705 4:-44616896 MsaT020105.1:CDS
ACTTTCATTGGACGAATGAC+CGG 0.459504 4:+44616191 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4:+44616865 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4:+44616578 None:intergenic
ATTGCTGACATCTTTGCCGT+TGG 0.498202 4:-44616058 MsaT020105.1:CDS
TACTATTCCACTTGGTGTGT+TGG 0.498616 4:+44616248 None:intergenic
CTTTCATTGGACGAATGACC+GGG 0.500764 4:+44616192 None:intergenic
CTAAGGCCTAATATCAAAAG+AGG 0.501825 4:-44616678 MsaT020105.1:CDS
TCTTGAGGGAAGTGTGCCAA+TGG 0.503047 4:+44616541 None:intergenic
CAATTACCAAATTACTCCTC+CGG 0.510964 4:-44616436 MsaT020105.1:CDS
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4:-44616731 MsaT020105.1:intron
GGATTCATTTATAAAAGATG+TGG 0.515547 4:-44616298 MsaT020105.1:CDS
TGGGACATGTCATCCTCATA+TGG 0.519430 4:+44616093 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4:-44616732 MsaT020105.1:intron
TCCAGGTAACTCGGCCGCAA+TGG 0.530910 4:+44616587 None:intergenic
ACCATTGGTGTCTAAGATCT+GGG 0.533225 4:+44616407 None:intergenic
AAAATTAGTGGAATGAGGAA+AGG 0.534235 4:-44616957 MsaT020105.1:CDS
AAACTTCACTCAAGAAGAAG+AGG 0.534788 4:-44616655 MsaT020105.1:CDS
CCCAAAATCATCCAAAGTAG+TGG 0.535258 4:+44616326 None:intergenic
TATCTATAGCTCTCTTCTTG+AGG 0.540945 4:+44616526 None:intergenic
GTGACAAAATTAGTGGAATG+AGG 0.554265 4:-44616962 MsaT020105.1:CDS
AAATTAGTGGAATGAGGAAA+GGG 0.554513 4:-44616956 MsaT020105.1:CDS
ATAATGAAGTGAAGAACCAT+TGG 0.556377 4:-44616557 MsaT020105.1:CDS
GGATATATCTCTCCCTTGTG+TGG 0.558281 4:+44616458 None:intergenic
AAAGATGTCAGCAATTGTCT+TGG 0.567913 4:+44616066 None:intergenic
TCTAAGATCTGGGAACTAGC+CGG 0.568668 4:+44616417 None:intergenic
TCAGCAATTGTCTTGGAACG+TGG 0.572071 4:+44616073 None:intergenic
TATCAATTACCTGCAAACTT+GGG 0.584381 4:+44616858 None:intergenic
GATATTTCCAACACACCAAG+TGG 0.595510 4:-44616255 MsaT020105.1:CDS
AAATGGAGATAATGGACCAT+TGG 0.601795 4:+44616392 None:intergenic
GTGGAATGAGGAAAGGGACA+TGG 0.609703 4:-44616950 MsaT020105.1:CDS
TCCCAGATCTTAGACACCAA+TGG 0.629680 4:-44616408 MsaT020105.1:CDS
CAGCAATTGTCTTGGAACGT+GGG 0.630429 4:+44616074 None:intergenic
GTGGGAAGAGTTGTAGATTG+AGG 0.631661 4:-44616713 MsaT020105.1:CDS
GACATAATTGAATCCACACA+AGG 0.645918 4:-44616471 MsaT020105.1:CDS
GAATAGATGGTCGACCATTG+CGG 0.650619 4:-44616601 MsaT020105.1:CDS
GGAACTGTGATATGAAGATG+TGG 0.659577 4:+44616347 None:intergenic
GGAAGAGTTGTAGATTGAGG+TGG 0.677125 4:-44616710 MsaT020105.1:CDS
AAGATCTGGGAACTAGCCGG+AGG 0.689138 4:+44616420 None:intergenic
ACATAATTGAATCCACACAA+GGG 0.713140 4:-44616470 MsaT020105.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 44616014 44617003 44616014 ID=MsaG020105
Chr4 mRNA 44616014 44617003 44616014 ID=MsaT020105.1;Parent=MsaG020105
Chr4 exon 44616014 44616747 44616014 ID=MsaT020105.1.exon2;Parent=MsaT020105.1
Chr4 CDS 44616014 44616747 44616014 ID=cds.MsaT020105.1;Parent=MsaT020105.1
Chr4 exon 44616868 44617003 44616868 ID=MsaT020105.1.exon1;Parent=MsaT020105.1
Chr4 CDS 44616868 44617003 44616868 ID=cds.MsaT020105.1;Parent=MsaT020105.1
Gene Sequence

>MsaT020105.1

ATGGCCAGAACTCCTTCATGTGACAAAATTAGTGGAATGAGGAAAGGGACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGCTGAATTATCTAAGGCCTAATATCAAAAGAGGAAACTTCACTCAAGAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCGACCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCACACTTCCCTCAAGAAGAGAGCTATAGATAACATAGTCACAAATGAAGAAACCAAATCAAAAGACATAATTGAATCCACACAAGGGAGAGATATATCCAATTACCAAATTACTCCTCCGGCTAGTTCCCAGATCTTAGACACCAATGGTCCATTATCTCCATTTTCATCATCTAGTGAATTCTCTTCCACATCTTCATATCACAGTTCCACTACTTTGGATGATTTTGGGTTTCTGGATTCATTTATAAAAGATGTGGATGAAAACTTTTGGCTTAATGATATTTCCAACACACCAAGTGGAATAGTACAAAACAATACTAATGATGCTTTTTTAGTGTCTCCCGGTCATTCGTCCAATGAAAGTTTTGTTATGGATAACGATTTTGGAAGCTTTTTAGATGCTTACAAGGAGTCAGCAGTTGATAGTTTTTGGACACAACCATATGAGGATGACATGTCCCACGTTCCAAGACAATTGCTGACATCTTTGCCGTTGGAATCTGAATATTTTTCTATAGTATATGATGATATTTGGAGTTGA
Protein sequence

>MsaT020105.1

MARTPSCDKISGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQEEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSKDIIESTQGRDISNYQITPPASSQILDTNGPLSPFSSSSEFSSTSSYHSSTTLDDFGFLDSFIKDVDENFWLNDISNTPSGIVQNNTNDAFLVSPGHSSNESFVMDNDFGSFLDAYKESAVDSFWTQPYEDDMSHVPRQLLTSLPLESEYFSIVYDDIWS*