AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG020107

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020107 MtrunA17_Chr4g0022931 78.930 299 35 2 1 298 1 272 2.67e-163 454
MsaG020107 MtrunA17_Chr4g0022911 71.617 303 69 6 1 298 1 291 2.26e-140 397
MsaG020107 MtrunA17_Chr4g0022901 69.333 300 62 6 1 298 1 272 7.09e-139 393
MsaG020107 MtrunA17_Chr2g0323351 68.116 138 43 1 1 138 1 137 1.38e-67 211
MsaG020107 MtrunA17_Chr1g0167691 49.510 204 87 6 1 203 1 189 5.54e-57 184
MsaG020107 MtrunA17_Chr7g0274581 57.143 140 59 1 1 140 1 139 1.19e-56 181
MsaG020107 MtrunA17_Chr1g0187761 47.343 207 98 4 1 207 1 196 3.15e-56 182
MsaG020107 MtrunA17_Chr7g0261281 59.028 144 54 2 1 144 1 139 1.03e-55 181
MsaG020107 MtrunA17_Chr1g0167661 66.667 117 38 1 1 117 1 116 9.32e-55 178
MsaG020107 MtrunA17_Chr2g0281071 64.957 117 41 0 1 117 1 117 1.05e-54 181
MsaG020107 MtrunA17_Chr4g0048511 64.103 117 42 0 1 117 1 117 2.93e-54 180
MsaG020107 MtrunA17_Chr4g0022881 60.000 130 51 1 1 130 1 129 1.04e-53 174
MsaG020107 MtrunA17_Chr1g0203411 64.103 117 41 1 1 117 1 116 3.49e-53 175
MsaG020107 MtrunA17_Chr2g0323411 61.364 132 50 1 1 132 1 131 4.26e-53 176
MsaG020107 MtrunA17_Chr4g0042671 66.667 117 38 1 1 117 1 116 8.13e-53 177
MsaG020107 MtrunA17_Chr3g0115821 61.538 117 44 1 1 117 1 116 1.75e-52 175
MsaG020107 MtrunA17_Chr4g0039971 53.378 148 53 3 1 133 2 148 3.44e-52 174
MsaG020107 MtrunA17_Chr8g0349261 63.559 118 42 1 1 117 1 118 8.64e-52 172
MsaG020107 MtrunA17_Chr1g0211161 60.684 117 46 0 1 117 1 117 1.77e-51 169
MsaG020107 MtrunA17_Chr4g0022891 43.662 213 107 5 1 203 1 210 1.86e-51 169
MsaG020107 MtrunA17_Chr1g0193801 40.670 209 122 1 6 214 5 211 5.75e-51 172
MsaG020107 MtrunA17_Chr7g0217741 64.103 117 41 1 1 117 1 116 6.26e-51 170
MsaG020107 MtrunA17_Chr6g0453471 64.103 117 41 1 1 117 1 116 6.39e-51 171
MsaG020107 MtrunA17_Chr4g0070611 64.103 117 41 1 1 117 1 116 1.22e-50 169
MsaG020107 MtrunA17_Chr1g0193371 55.000 140 55 1 6 137 5 144 1.22e-50 171
MsaG020107 MtrunA17_Chr2g0323321 78.495 93 18 2 1 93 1 91 1.62e-50 162
MsaG020107 MtrunA17_Chr8g0346561 62.602 123 45 1 1 123 1 122 1.86e-50 168
MsaG020107 MtrunA17_Chr7g0275911 61.983 121 45 1 1 121 1 120 3.52e-50 166
MsaG020107 MtrunA17_Chr3g0117091 47.929 169 86 2 7 173 6 174 3.81e-50 169
MsaG020107 MtrunA17_Chr4g0070641 48.000 175 82 3 1 175 1 166 4.16e-50 163
MsaG020107 MtrunA17_Chr5g0410961 62.393 117 43 1 1 117 1 116 6.83e-50 168
MsaG020107 MtrunA17_Chr4g0057031 61.538 117 44 1 1 117 1 116 7.04e-50 166
MsaG020107 MtrunA17_Chr3g0131121 62.393 117 43 1 1 117 1 116 1.34e-49 166
MsaG020107 MtrunA17_Chr4g0058631 62.500 112 42 0 6 117 5 116 2.41e-49 167
MsaG020107 MtrunA17_Chr4g0037141 45.506 178 90 3 1 173 1 176 2.90e-49 165
MsaG020107 MtrunA17_Chr7g0270891 52.027 148 60 1 6 142 5 152 5.03e-49 167
MsaG020107 MtrunA17_Chr7g0228891 58.974 117 47 1 1 117 1 116 5.58e-49 164
MsaG020107 MtrunA17_Chr5g0395281 59.829 117 46 1 1 117 1 116 8.09e-49 164
MsaG020107 MtrunA17_Chr7g0217221 56.296 135 52 2 1 129 1 134 9.37e-49 163
MsaG020107 MtrunA17_Chr5g0434571 60.684 117 45 1 1 117 37 152 1.30e-48 165
MsaG020107 MtrunA17_Chr4g0068061 60.684 117 45 1 1 117 1 116 1.39e-48 165
MsaG020107 MtrunA17_Chr2g0311221 64.545 110 38 1 2 111 4 112 2.00e-48 164
MsaG020107 MtrunA17_Chr3g0110351 54.286 140 53 3 1 130 1 139 2.07e-48 163
MsaG020107 MtrunA17_Chr8g0385321 59.829 117 46 1 1 117 1 116 2.53e-48 163
MsaG020107 MtrunA17_Chr4g0044421 61.739 115 44 0 3 117 2 116 9.45e-48 158
MsaG020107 MtrunA17_Chr8g0342541 58.929 112 46 0 6 117 5 116 1.09e-47 162
MsaG020107 MtrunA17_Chr2g0330041 60.714 112 44 0 6 117 5 116 1.67e-47 164
MsaG020107 MtrunA17_Chr3g0103281 58.120 117 48 1 1 117 1 116 3.05e-47 161
MsaG020107 MtrunA17_Chr6g0452271 58.974 117 47 1 1 117 1 116 3.90e-47 161
MsaG020107 MtrunA17_Chr2g0309911 60.360 111 44 0 7 117 5 115 4.06e-47 160
MsaG020107 MtrunA17_Chr8g0342521 58.036 112 47 0 6 117 5 116 6.86e-47 160
MsaG020107 MtrunA17_Chr5g0435101 60.000 115 45 1 3 117 2 115 9.07e-47 156
MsaG020107 MtrunA17_Chr3g0121241 60.360 111 44 0 7 117 36 146 6.32e-46 157
MsaG020107 MtrunA17_Chr8g0342481 59.649 114 43 2 6 117 5 117 8.09e-46 159
MsaG020107 MtrunA17_Chr4g0060721 55.372 121 53 1 1 121 2 121 1.67e-45 156
MsaG020107 MtrunA17_Chr7g0254411 58.475 118 48 1 1 118 1 117 1.86e-45 156
MsaG020107 MtrunA17_Chr1g0151941 55.085 118 51 2 1 117 1 117 2.15e-45 154
MsaG020107 MtrunA17_Chr6g0453211 60.360 111 43 1 1 111 1 110 7.36e-45 154
MsaG020107 MtrunA17_Chr7g0271241 62.857 105 39 0 6 110 5 109 8.65e-45 156
MsaG020107 MtrunA17_Chr3g0088461 62.963 108 40 0 10 117 19 126 1.05e-44 155
MsaG020107 MtrunA17_Chr2g0328771 62.857 105 39 0 13 117 20 124 1.27e-44 154
MsaG020107 MtrunA17_Chr4g0055981 54.331 127 54 1 10 132 52 178 1.34e-44 151
MsaG020107 MtrunA17_Chr8g0387421 57.143 112 48 0 6 117 5 116 1.77e-44 154
MsaG020107 MtrunA17_Chr3g0092401 53.488 129 52 2 1 122 2 129 2.20e-44 153
MsaG020107 MtrunA17_Chr4g0028311 56.780 118 49 2 1 117 1 117 3.18e-44 153
MsaG020107 MtrunA17_Chr1g0194951 57.265 117 49 1 1 117 1 116 6.53e-44 153
MsaG020107 MtrunA17_Chr1g0152011 55.085 118 51 2 1 117 1 117 1.08e-43 152
MsaG020107 MtrunA17_Chr5g0400821 55.932 118 50 2 1 117 1 117 1.48e-43 150
MsaG020107 MtrunA17_Chr5g0417821 61.321 106 41 0 12 117 6 111 1.50e-43 150
MsaG020107 MtrunA17_Chr6g0470971 55.118 127 47 1 9 135 10 126 1.59e-43 150
MsaG020107 MtrunA17_Chr7g0264641 55.932 118 50 2 1 117 1 117 1.65e-43 149
MsaG020107 MtrunA17_Chr1g0203441 58.120 117 49 0 1 117 1 117 1.81e-43 149
MsaG020107 MtrunA17_Chr3g0135311 55.932 118 50 2 1 117 1 117 1.91e-43 151
MsaG020107 MtrunA17_Chr5g0397231 58.491 106 44 0 6 111 5 110 3.34e-43 150
MsaG020107 MtrunA17_Chr4g0032401 60.952 105 41 0 13 117 17 121 3.41e-43 150
MsaG020107 MtrunA17_Chr1g0209661 55.200 125 53 1 13 137 27 148 5.81e-43 149
MsaG020107 MtrunA17_Chr5g0434931 60.377 106 42 0 12 117 34 139 1.93e-42 147
MsaG020107 MtrunA17_Chr1g0180391 42.188 192 100 5 13 200 19 203 2.25e-42 145
MsaG020107 MtrunA17_Chr7g0228231 55.932 118 52 0 13 130 14 131 2.29e-42 145
MsaG020107 MtrunA17_Chr7g0220341 51.389 144 59 3 8 149 20 154 2.40e-42 147
MsaG020107 MtrunA17_Chr2g0327351 57.143 112 46 2 1 111 1 111 4.54e-42 147
MsaG020107 MtrunA17_Chr7g0240821 54.237 118 54 0 17 134 5 122 8.93e-42 144
MsaG020107 MtrunA17_Chr5g0434911 58.716 109 45 0 9 117 17 125 1.57e-41 144
MsaG020107 MtrunA17_Chr7g0269831 60.684 117 45 1 1 117 1 116 3.31e-41 146
MsaG020107 MtrunA17_Chr4g0054391 55.856 111 47 2 1 110 1 110 4.39e-41 144
MsaG020107 MtrunA17_Chr7g0228991 59.091 110 45 0 8 117 24 133 4.57e-41 143
MsaG020107 MtrunA17_Chr3g0080861 51.200 125 61 0 13 137 37 161 5.27e-41 149
MsaG020107 MtrunA17_Chr6g0450101 55.085 118 50 1 13 127 14 131 6.79e-41 141
MsaG020107 MtrunA17_Chr5g0434831 59.091 110 45 0 8 117 2 111 1.04e-40 140
MsaG020107 MtrunA17_Chr5g0434841 56.522 115 50 0 3 117 10 124 1.52e-40 143
MsaG020107 MtrunA17_Chr3g0099131 56.604 106 46 0 11 116 39 144 1.93e-40 147
MsaG020107 MtrunA17_Chr1g0194291 48.227 141 64 1 8 148 16 147 2.48e-40 141
MsaG020107 MtrunA17_Chr8g0360111 61.165 103 40 0 11 113 23 125 2.81e-40 141
MsaG020107 MtrunA17_Chr1g0186061 60.194 103 41 0 14 116 21 123 3.02e-40 140
MsaG020107 MtrunA17_Chr1g0168661 55.932 118 51 1 14 131 22 138 3.92e-40 140
MsaG020107 MtrunA17_Chr8g0343831 53.846 117 49 1 1 117 1 112 4.81e-40 140
MsaG020107 MtrunA17_Chr8g0354661 58.654 104 43 0 13 116 37 140 5.08e-40 146
MsaG020107 MtrunA17_Chr4g0072751 56.250 112 47 2 1 111 1 111 5.55e-40 142
MsaG020107 MtrunA17_Chr1g0154031 48.837 129 66 0 13 141 76 204 9.15e-40 143
MsaG020107 MtrunA17_Chr6g0487491 53.600 125 48 3 1 116 1 124 2.06e-39 139
MsaG020107 MtrunA17_Chr1g0194301 57.143 105 45 0 13 117 33 137 5.20e-39 138
MsaG020107 MtrunA17_Chr2g0327821 42.667 150 83 1 13 159 6 155 1.41e-38 135
MsaG020107 MtrunA17_Chr2g0322521 54.545 110 50 0 7 116 23 132 1.86e-37 137
MsaG020107 MtrunA17_Chr4g0030881 54.545 110 43 1 14 116 8 117 9.79e-36 129
MsaG020107 MtrunA17_Chr4g0042611 59.551 89 35 1 1 89 1 88 3.44e-35 122
MsaG020107 MtrunA17_Chr7g0247131 68.919 74 23 0 44 117 9 82 2.73e-34 125
MsaG020107 MtrunA17_Chr2g0293911 53.636 110 51 0 8 117 19 128 4.20e-34 126
MsaG020107 MtrunA17_Chr4g0068921 55.340 103 46 0 13 115 24 126 2.31e-33 121
MsaG020107 MtrunA17_Chr1g0192411 49.524 105 53 0 13 117 12 116 3.49e-33 125
MsaG020107 MtrunA17_Chr5g0440781 49.515 103 51 1 14 115 13 115 1.05e-32 119
MsaG020107 MtrunA17_Chr8g0342531 57.955 88 37 0 3 90 2 89 1.13e-32 118
MsaG020107 MtrunA17_Chr5g0441141 49.515 103 51 1 14 115 13 115 1.15e-32 121
MsaG020107 MtrunA17_Chr5g0440761 49.515 103 51 1 14 115 13 115 1.17e-32 121
MsaG020107 MtrunA17_Chr5g0395221 58.427 89 36 1 1 89 1 88 1.61e-32 115
MsaG020107 MtrunA17_Chr8g0342511 57.831 83 35 0 6 88 5 87 3.26e-32 115
MsaG020107 MtrunA17_Chr2g0294811 55.914 93 40 1 1 93 1 92 7.68e-32 114
MsaG020107 MtrunA17_Chr5g0441131 46.552 116 57 2 1 115 1 112 2.44e-31 115
MsaG020107 MtrunA17_Chr4g0013361 33.019 212 132 6 13 220 10 215 1.31e-30 116
MsaG020107 MtrunA17_Chr8g0334881 50.000 106 51 2 13 117 10 114 2.03e-30 116
MsaG020107 MtrunA17_Chr8g0342461 55.682 88 34 2 6 90 5 90 5.87e-30 110
MsaG020107 MtrunA17_Chr8g0342471 54.545 88 35 2 6 90 5 90 2.91e-29 108
MsaG020107 MtrunA17_Chr5g0434901 70.588 68 20 0 47 114 7 74 3.55e-29 107
MsaG020107 MtrunA17_Chr3g0133601 50.485 103 50 1 15 117 37 138 4.18e-29 110
MsaG020107 MtrunA17_Chr5g0429661 34.759 187 108 6 15 193 122 302 7.09e-29 113
MsaG020107 MtrunA17_Chr3g0099141 51.163 86 42 0 10 95 37 122 7.75e-29 107
MsaG020107 MtrunA17_Chr7g0229131 43.836 146 68 4 44 185 3 138 1.18e-28 108
MsaG020107 MtrunA17_Chr6g0454921 49.515 103 51 1 15 117 15 116 4.16e-28 107
MsaG020107 MtrunA17_Chr4g0008551 39.610 154 84 4 15 167 38 183 2.33e-27 108
MsaG020107 MtrunA17_Chr4g0053431 47.059 102 53 1 15 116 5 105 2.69e-27 107
MsaG020107 MtrunA17_Chr4g0058991 43.478 115 62 2 3 116 197 309 7.30e-27 109
MsaG020107 MtrunA17_Chr7g0229101 63.380 71 26 0 44 114 3 73 1.18e-26 103
MsaG020107 MtrunA17_Chr5g0401731 35.882 170 94 3 15 184 15 169 1.85e-26 106
MsaG020107 MtrunA17_Chr7g0238631 47.619 105 52 2 15 118 113 215 9.82e-26 106
MsaG020107 MtrunA17_Chr6g0480581 48.515 101 51 1 15 115 4 103 1.40e-25 102
MsaG020107 MtrunA17_Chr7g0228531 46.154 104 54 2 13 116 218 319 3.78e-25 103
MsaG020107 MtrunA17_Chr6g0453751 48.936 94 39 2 12 96 19 112 4.92e-25 97.4
MsaG020107 MtrunA17_Chr5g0417621 39.706 136 79 2 9 143 128 261 5.22e-25 103
MsaG020107 MtrunA17_Chr3g0117511 39.316 117 67 3 2 116 169 283 7.84e-25 103
MsaG020107 MtrunA17_Chr5g0425591 48.454 97 45 2 1 96 1 93 2.16e-24 94.4
MsaG020107 MtrunA17_Chr3g0139671 43.269 104 58 1 15 118 85 187 2.88e-24 102
MsaG020107 MtrunA17_Chr3g0139671 33.333 114 74 2 15 127 33 145 1.38e-13 71.2
MsaG020107 MtrunA17_Chr1g0157731 43.396 106 59 1 13 118 89 193 2.94e-24 102
MsaG020107 MtrunA17_Chr1g0157731 32.456 114 75 2 15 127 39 151 8.87e-14 71.6
MsaG020107 MtrunA17_Chr4g0042501 46.602 103 52 2 15 116 105 205 9.79e-24 100
MsaG020107 MtrunA17_Chr7g0254261 39.597 149 87 3 15 162 89 235 2.49e-22 95.5
MsaG020107 MtrunA17_Chr3g0125801 47.573 103 51 2 15 116 16 116 3.30e-22 94.0
MsaG020107 MtrunA17_Chr7g0228401 35.115 131 69 2 26 141 290 419 4.14e-22 95.9
MsaG020107 MtrunA17_Chr5g0437321 42.718 103 50 2 15 113 19 116 5.14e-22 93.2
MsaG020107 MtrunA17_Chr6g0460661 39.806 103 59 2 15 116 16 116 5.44e-22 90.1
MsaG020107 MtrunA17_Chr7g0228481 44.000 100 54 2 13 112 218 315 1.50e-21 94.0
MsaG020107 MtrunA17_Chr3g0093811 51.899 79 38 0 44 122 13 91 1.67e-21 91.7
MsaG020107 MtrunA17_Chr6g0460671 42.157 102 58 1 15 116 99 199 5.30e-21 91.7
MsaG020107 MtrunA17_Chr5g0397841 43.878 98 54 1 13 110 108 204 5.75e-20 89.7
MsaG020107 MtrunA17_Chr7g0233061 38.017 121 65 4 9 124 174 289 7.87e-20 88.2
MsaG020107 MtrunA17_Chr7g0238651 42.708 96 53 1 18 111 10 105 1.81e-19 87.4
MsaG020107 MtrunA17_Chr1g0177901 36.800 125 60 4 26 134 4 125 5.56e-19 83.6
MsaG020107 MtrunA17_Chr8g0362231 36.429 140 74 3 17 155 24 149 2.06e-16 79.0
MsaG020107 MtrunA17_Chr5g0434871 67.442 43 14 0 75 117 2 44 1.45e-15 70.1
MsaG020107 MtrunA17_Chr1g0193901 43.617 94 51 2 6 97 4 97 1.47e-15 71.6
MsaG020107 MtrunA17_Chr1g0193891 43.617 94 51 2 6 97 4 97 1.47e-15 71.6
MsaG020107 MtrunA17_Chr1g0193871 43.617 94 51 2 6 97 4 97 1.47e-15 71.6
MsaG020107 MtrunA17_Chr1g0193881 43.617 94 51 2 6 97 4 97 1.47e-15 71.6
MsaG020107 MtrunA17_Chr5g0416341 37.963 108 64 2 17 123 28 133 3.05e-15 75.9
MsaG020107 MtrunA17_Chr2g0323331 31.132 212 112 9 89 269 5 213 1.18e-14 73.6
MsaG020107 MtrunA17_Chr5g0434891 39.130 92 44 2 78 161 1 88 2.75e-12 63.5
MsaG020107 MtrunA17_Chr2g0322831 61.538 39 15 0 71 109 34 72 1.05e-11 60.1
MsaG020107 MtrunA17_Chr3g0104501 47.059 68 33 2 1 67 119 184 5.74e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG020107 AT1G06180.1 47.005 217 99 6 1 217 1 201 1.11e-56 183
MsaG020107 AT2G31180.1 47.115 208 92 4 1 207 1 191 5.48e-56 181
MsaG020107 AT3G23250.1 46.354 192 100 2 1 192 1 189 4.05e-55 180
MsaG020107 AT4G05100.1 64.957 117 41 0 1 117 1 117 2.22e-54 180
MsaG020107 AT4G28110.1 64.957 117 40 1 1 117 1 116 1.90e-53 176
MsaG020107 AT5G16770.4 64.103 117 41 1 1 117 1 116 5.66e-53 176
MsaG020107 AT5G16770.3 64.103 117 41 1 1 117 1 116 5.66e-53 176
MsaG020107 AT3G02940.2 64.103 117 41 1 1 117 1 116 6.86e-53 175
MsaG020107 AT4G21440.1 63.248 117 42 1 1 117 1 116 1.12e-52 176
MsaG020107 AT4G17785.2 54.676 139 62 1 1 138 1 139 1.20e-52 176
MsaG020107 AT4G17785.1 54.676 139 62 1 1 138 1 139 1.23e-52 176
MsaG020107 AT5G16770.1 64.103 117 41 1 1 117 1 116 1.43e-52 175
MsaG020107 AT5G16770.2 64.103 117 41 1 1 117 1 116 1.43e-52 175
MsaG020107 AT3G02940.1 64.103 117 41 1 1 117 1 116 1.50e-52 175
MsaG020107 AT3G02940.3 64.103 117 41 1 1 117 1 116 1.50e-52 175
MsaG020107 AT2G16720.1 54.305 151 60 3 1 143 1 150 2.59e-52 172
MsaG020107 AT3G01140.2 65.812 117 39 1 1 117 1 116 2.79e-52 175
MsaG020107 AT3G61250.1 64.957 117 40 1 1 117 1 116 3.59e-52 173
MsaG020107 AT1G22640.1 44.845 194 88 4 1 187 1 182 1.47e-51 170
MsaG020107 AT5G15310.2 64.957 117 40 1 1 117 1 116 1.54e-51 172
MsaG020107 AT5G15310.4 64.957 117 40 1 1 117 1 116 1.56e-51 170
MsaG020107 AT5G15310.1 64.957 117 40 1 1 117 1 116 1.57e-51 172
MsaG020107 AT1G16490.1 56.923 130 55 1 2 131 4 132 1.72e-51 171
MsaG020107 AT1G79180.1 62.069 116 43 1 2 117 4 118 3.28e-51 171
MsaG020107 AT5G60890.1 60.000 125 49 1 1 125 1 124 1.74e-50 169
MsaG020107 AT3G01140.1 64.957 117 40 1 1 117 44 159 2.87e-50 171
MsaG020107 AT1G18570.1 62.393 117 44 0 1 117 1 117 2.89e-50 170
MsaG020107 AT4G38620.1 52.632 152 67 3 1 151 1 148 2.91e-50 168
MsaG020107 AT3G13540.1 39.908 218 100 3 3 200 13 219 5.55e-50 166
MsaG020107 AT5G10280.1 60.684 117 45 1 1 117 1 116 1.58e-49 167
MsaG020107 AT1G34670.1 51.049 143 69 1 1 143 1 142 3.22e-49 167
MsaG020107 AT4G01680.3 55.245 143 53 2 6 137 5 147 3.44e-49 164
MsaG020107 AT5G65230.1 60.684 117 45 1 1 117 1 116 3.67e-49 166
MsaG020107 AT4G12350.1 43.842 203 104 3 1 200 1 196 4.16e-49 165
MsaG020107 AT4G01680.1 54.861 144 54 2 6 138 5 148 8.95e-49 166
MsaG020107 AT5G56110.1 59.829 117 46 1 1 117 1 116 1.06e-48 165
MsaG020107 AT1G56160.1 59.483 116 46 1 2 117 4 118 1.67e-48 164
MsaG020107 AT1G66230.1 47.712 153 71 2 1 145 1 152 2.48e-48 163
MsaG020107 AT4G22680.1 59.829 117 46 1 1 117 1 116 3.16e-48 162
MsaG020107 AT1G74430.1 63.063 111 41 0 12 122 11 121 3.94e-48 162
MsaG020107 AT4G09460.1 58.974 117 47 1 1 117 1 116 4.28e-48 160
MsaG020107 AT5G26660.1 62.500 112 42 0 6 117 5 116 4.53e-48 164
MsaG020107 AT1G35515.1 58.120 117 48 1 1 117 1 116 5.37e-48 160
MsaG020107 AT1G74080.1 62.609 115 42 1 1 115 1 114 7.00e-48 163
MsaG020107 AT1G09540.1 47.799 159 75 1 6 156 5 163 9.32e-48 164
MsaG020107 AT5G54230.1 64.762 105 37 0 13 117 12 116 1.97e-47 161
MsaG020107 AT5G16600.1 58.974 117 47 1 1 117 1 116 2.05e-47 162
MsaG020107 AT5G14750.1 53.793 145 56 3 14 158 17 150 2.14e-47 158
MsaG020107 AT4G34990.1 60.684 117 45 1 1 117 1 116 2.20e-47 160
MsaG020107 AT1G08810.1 45.652 184 92 3 1 184 1 176 2.85e-47 160
MsaG020107 AT3G62610.1 60.684 117 45 1 1 117 1 116 4.17e-47 161
MsaG020107 AT5G07690.1 60.000 115 45 1 1 115 1 114 4.36e-47 161
MsaG020107 AT5G61420.2 50.000 152 72 2 1 152 1 148 4.98e-47 162
MsaG020107 AT3G28470.1 63.063 111 40 1 1 111 1 110 9.18e-47 160
MsaG020107 AT1G57560.2 50.360 139 61 1 6 136 5 143 9.39e-47 158
MsaG020107 AT5G62320.1 46.667 180 79 6 2 165 3 181 1.20e-46 157
MsaG020107 AT2G47460.1 51.634 153 68 4 1 153 1 147 1.25e-46 161
MsaG020107 AT1G57560.1 58.929 112 46 0 6 117 5 116 1.42e-46 159
MsaG020107 AT3G13890.2 59.821 112 45 0 6 117 5 116 1.46e-46 160
MsaG020107 AT5G07700.1 58.974 117 47 1 1 117 1 116 2.05e-46 159
MsaG020107 AT5G07700.2 58.974 117 47 1 1 117 1 116 2.05e-46 159
MsaG020107 AT3G47600.1 58.120 117 48 1 1 117 1 116 2.08e-46 159
MsaG020107 AT3G12820.1 59.130 115 46 1 3 117 5 118 2.42e-46 156
MsaG020107 AT5G14340.1 56.303 119 51 1 1 119 13 130 3.42e-46 157
MsaG020107 AT3G28910.1 57.627 118 49 1 1 118 1 117 1.26e-45 157
MsaG020107 AT5G49330.1 58.974 117 47 1 1 117 1 116 1.62e-45 157
MsaG020107 AT1G18710.1 59.459 111 45 0 12 122 11 121 1.65e-45 155
MsaG020107 AT4G01680.2 50.641 156 54 3 6 138 5 160 2.26e-45 157
MsaG020107 AT5G40330.1 64.423 104 37 0 14 117 13 116 2.98e-45 153
MsaG020107 AT1G74650.1 58.120 117 48 1 1 117 1 116 3.01e-45 156
MsaG020107 AT3G12720.1 54.955 111 50 0 7 117 16 126 4.65e-45 155
MsaG020107 AT5G62470.2 57.265 117 49 1 1 117 1 116 4.72e-45 156
MsaG020107 AT1G79180.2 48.322 149 43 2 2 117 4 151 5.52e-45 155
MsaG020107 AT3G27810.1 41.414 198 109 4 13 204 20 216 1.28e-44 151
MsaG020107 AT5G57620.1 56.780 118 49 2 1 117 1 117 1.76e-44 154
MsaG020107 AT3G27920.1 62.500 104 39 0 14 117 15 118 2.29e-44 151
MsaG020107 AT3G49690.1 52.713 129 59 2 1 128 1 128 3.99e-44 152
MsaG020107 AT1G63910.1 56.250 112 49 0 6 117 5 116 8.28e-44 153
MsaG020107 AT3G13890.1 55.372 121 45 1 6 117 5 125 1.48e-43 152
MsaG020107 AT5G62470.1 57.265 117 48 2 1 117 1 115 1.52e-43 152
MsaG020107 AT5G12870.1 57.265 117 50 0 1 117 6 122 3.73e-43 149
MsaG020107 AT5G65790.1 51.515 132 62 2 1 131 1 131 4.38e-43 152
MsaG020107 AT5G23000.1 55.085 118 51 2 1 117 1 117 1.44e-42 149
MsaG020107 AT5G35550.1 57.391 115 49 0 3 117 4 118 2.29e-42 147
MsaG020107 AT4G37780.1 53.390 118 53 2 1 117 1 117 2.96e-42 147
MsaG020107 AT3G11440.2 57.407 108 46 0 9 116 37 144 2.98e-42 151
MsaG020107 AT5G40350.1 39.286 196 108 3 13 204 17 205 8.55e-42 144
MsaG020107 AT4G26930.1 41.270 189 86 2 13 176 19 207 9.26e-42 148
MsaG020107 AT3G08500.1 58.182 110 46 0 8 117 25 134 9.73e-42 147
MsaG020107 AT3G11440.3 57.407 108 46 0 9 116 37 144 1.17e-41 151
MsaG020107 AT3G11440.4 57.407 108 46 0 9 116 37 144 1.17e-41 151
MsaG020107 AT3G11440.1 57.407 108 46 0 9 116 37 144 1.17e-41 151
MsaG020107 AT5G52600.1 61.468 109 42 0 8 116 7 115 1.28e-41 143
MsaG020107 AT2G36890.1 55.085 118 51 2 1 117 1 117 1.83e-41 145
MsaG020107 AT2G36890.2 55.085 118 51 2 1 117 42 158 3.16e-41 146
MsaG020107 AT2G32460.2 58.095 105 44 0 12 116 5 109 5.87e-41 148
MsaG020107 AT2G32460.1 58.095 105 44 0 12 116 17 121 5.89e-41 148
MsaG020107 AT5G06100.1 57.143 105 45 0 12 116 31 135 6.15e-41 147
MsaG020107 AT4G13480.1 58.475 118 48 1 14 131 7 123 8.43e-41 142
MsaG020107 AT5G55020.1 61.165 103 40 0 13 115 26 128 1.02e-40 148
MsaG020107 AT3G24310.1 55.285 123 54 1 12 134 17 138 1.28e-40 142
MsaG020107 AT5G06100.5 57.143 105 45 0 12 116 31 135 2.38e-40 147
MsaG020107 AT5G06100.2 57.143 105 45 0 12 116 31 135 2.38e-40 147
MsaG020107 AT5G06100.3 57.143 105 45 0 12 116 31 135 2.38e-40 147
MsaG020107 AT5G06100.4 57.143 105 45 0 12 116 31 135 2.38e-40 147
MsaG020107 AT3G01530.1 52.632 114 54 0 4 117 16 129 2.62e-40 140
MsaG020107 AT3G30210.1 50.000 142 66 2 12 153 26 162 9.81e-40 140
MsaG020107 AT1G66370.1 46.061 165 75 5 12 176 7 157 1.30e-39 139
MsaG020107 AT3G48920.1 58.654 104 43 0 14 117 19 122 1.57e-39 139
MsaG020107 AT2G47190.1 50.000 118 59 0 2 119 9 126 3.58e-39 139
MsaG020107 AT1G48000.1 42.683 164 77 3 13 176 32 178 4.61e-39 137
MsaG020107 AT2G26960.1 56.604 106 46 0 10 115 17 122 1.11e-38 141
MsaG020107 AT1G25340.1 39.698 199 104 3 14 199 19 214 1.33e-38 137
MsaG020107 AT1G68320.1 51.200 125 58 1 13 137 19 140 2.46e-38 137
MsaG020107 AT5G52260.1 60.194 103 41 0 14 116 13 115 9.30e-38 135
MsaG020107 AT4G25560.1 54.310 116 50 1 1 116 1 113 2.13e-37 134
MsaG020107 AT3G46130.1 54.128 109 50 0 9 117 5 113 4.26e-37 133
MsaG020107 AT5G59780.3 55.769 104 46 0 14 117 9 112 1.50e-36 130
MsaG020107 AT5G14750.3 52.985 134 43 5 25 158 3 116 7.99e-36 127
MsaG020107 AT1G66380.1 56.897 116 50 0 12 127 7 122 3.14e-35 124
MsaG020107 AT1G56650.1 50.365 137 57 2 12 148 7 132 2.40e-34 125
MsaG020107 AT3G27810.2 39.521 167 94 4 44 204 2 167 2.67e-34 123
MsaG020107 AT1G66390.1 60.000 105 42 0 12 116 7 111 3.10e-34 125
MsaG020107 AT3G06490.1 55.140 107 48 0 13 119 19 125 3.87e-34 127
MsaG020107 AT3G53200.1 50.000 110 55 0 9 118 5 114 4.17e-34 124
MsaG020107 AT1G25340.2 38.191 199 102 4 14 199 19 209 4.94e-34 125
MsaG020107 AT5G49620.1 56.311 103 45 0 13 115 26 128 9.95e-34 125
MsaG020107 AT1G25340.3 38.191 199 102 4 14 199 19 209 1.25e-33 125
MsaG020107 AT5G35550.2 68.831 77 24 0 41 117 45 121 3.59e-33 122
MsaG020107 AT5G26660.2 69.444 72 22 0 46 117 14 85 1.64e-32 122
MsaG020107 AT3G60460.1 50.435 115 54 2 9 120 7 121 7.20e-32 120
MsaG020107 AT5G40350.2 37.423 163 91 3 46 204 5 160 5.84e-31 114
MsaG020107 AT2G26950.1 49.020 102 52 0 10 111 13 114 9.12e-31 119
MsaG020107 AT3G47600.2 55.914 93 37 1 25 117 22 110 2.00e-30 117
MsaG020107 AT3G12820.2 68.116 69 22 0 49 117 2 70 2.55e-30 113
MsaG020107 AT5G49620.2 49.573 117 45 1 13 115 26 142 4.21e-30 116
MsaG020107 AT3G27785.1 43.939 132 66 3 1 132 175 298 4.40e-29 115
MsaG020107 AT3G46130.3 63.014 73 27 0 45 117 9 81 5.65e-29 110
MsaG020107 AT4G18770.1 45.370 108 58 1 9 116 211 317 8.52e-29 114
MsaG020107 AT5G59780.2 60.526 76 30 0 46 121 20 95 1.18e-28 109
MsaG020107 AT3G46130.4 63.889 72 26 0 46 117 20 91 1.44e-28 110
MsaG020107 AT5G11510.3 46.154 104 55 1 15 118 81 183 3.23e-27 112
MsaG020107 AT5G11510.3 33.333 114 74 2 15 127 29 141 2.25e-14 73.9
MsaG020107 AT5G11510.1 46.154 104 55 1 15 118 81 183 3.23e-27 112
MsaG020107 AT5G11510.1 33.333 114 74 2 15 127 29 141 2.25e-14 73.9
MsaG020107 AT5G11510.4 46.154 104 55 1 15 118 81 183 3.23e-27 112
MsaG020107 AT5G11510.4 33.333 114 74 2 15 127 29 141 2.25e-14 73.9
MsaG020107 AT5G11510.2 46.154 104 55 1 15 118 81 183 4.34e-27 111
MsaG020107 AT5G11510.2 33.333 114 74 2 15 127 29 141 2.42e-14 73.9
MsaG020107 AT5G11510.5 45.283 106 57 1 13 118 79 183 4.58e-27 111
MsaG020107 AT5G11510.5 33.333 114 74 2 15 127 29 141 2.51e-14 73.6
MsaG020107 AT3G50060.1 39.416 137 81 2 15 150 6 141 6.82e-27 107
MsaG020107 AT3G53200.2 60.274 73 29 0 46 118 9 81 1.39e-26 103
MsaG020107 AT5G14750.4 53.000 100 36 3 59 158 1 89 2.43e-26 101
MsaG020107 AT5G14750.2 53.000 100 36 3 59 158 1 89 2.43e-26 101
MsaG020107 AT3G23250.2 41.791 134 76 1 59 192 1 132 3.06e-26 103
MsaG020107 AT5G40360.1 45.370 108 56 2 9 115 152 257 3.13e-26 106
MsaG020107 AT3G09230.1 46.552 116 52 3 15 125 55 165 3.15e-26 107
MsaG020107 AT5G58850.1 44.660 103 54 2 15 116 105 205 3.33e-26 107
MsaG020107 AT4G33450.1 40.136 147 77 3 8 154 12 147 4.46e-26 103
MsaG020107 AT1G69560.1 46.296 108 55 2 10 116 102 207 4.72e-26 105
MsaG020107 AT1G69560.2 46.296 108 55 2 10 116 118 223 5.78e-26 105
MsaG020107 AT5G67300.1 47.059 102 53 1 15 116 6 106 1.05e-25 103
MsaG020107 AT1G17950.1 49.515 103 49 2 15 116 5 105 1.32e-25 102
MsaG020107 AT1G22640.3 40.441 136 63 3 59 187 1 125 2.49e-25 100
MsaG020107 AT5G11050.1 43.810 105 56 2 13 116 103 205 3.34e-25 104
MsaG020107 AT5G02320.1 45.192 104 56 1 15 118 127 229 8.97e-25 104
MsaG020107 AT5G02320.1 34.783 115 73 2 15 128 75 188 9.69e-14 71.6
MsaG020107 AT5G02320.2 45.192 104 56 1 15 118 127 229 8.97e-25 104
MsaG020107 AT5G02320.2 34.783 115 73 2 15 128 75 188 9.69e-14 71.6
MsaG020107 AT5G02320.3 45.192 104 56 1 15 118 67 169 9.84e-25 103
MsaG020107 AT5G02320.3 34.921 126 77 4 7 128 4 128 7.34e-14 72.0
MsaG020107 AT1G26780.1 47.573 103 51 2 15 116 98 198 1.24e-24 100
MsaG020107 AT1G26780.2 46.667 105 53 2 13 116 96 198 1.35e-24 102
MsaG020107 AT1G66380.3 65.753 73 25 0 44 116 6 78 1.54e-24 95.5
MsaG020107 AT4G37260.1 45.631 103 55 1 15 117 13 114 1.81e-24 100
MsaG020107 AT3G09370.1 45.283 106 49 2 15 116 130 230 3.00e-24 102
MsaG020107 AT3G09370.1 33.333 114 74 2 15 127 78 190 4.60e-12 66.6
MsaG020107 AT3G09370.2 45.283 106 49 2 15 116 135 235 3.04e-24 102
MsaG020107 AT3G09370.2 33.333 114 74 2 15 127 83 195 4.59e-12 66.6
MsaG020107 AT3G09370.3 45.283 106 49 2 15 116 143 243 4.58e-24 102
MsaG020107 AT3G09370.3 33.333 114 74 2 15 127 91 203 4.30e-12 66.6
MsaG020107 AT4G32730.5 42.453 106 60 1 13 118 85 189 9.85e-24 101
MsaG020107 AT4G32730.5 33.333 114 74 2 15 127 35 147 1.03e-13 72.0
MsaG020107 AT4G32730.4 42.453 106 60 1 13 118 85 189 9.85e-24 101
MsaG020107 AT4G32730.4 33.333 114 74 2 15 127 35 147 1.03e-13 72.0
MsaG020107 AT4G32730.3 42.453 106 60 1 13 118 85 189 9.85e-24 101
MsaG020107 AT4G32730.3 33.333 114 74 2 15 127 35 147 1.03e-13 72.0
MsaG020107 AT4G32730.2 42.453 106 60 1 13 118 85 189 9.85e-24 101
MsaG020107 AT4G32730.2 33.333 114 74 2 15 127 35 147 1.03e-13 72.0
MsaG020107 AT1G73410.1 50.000 104 49 2 15 117 6 107 1.17e-23 97.4
MsaG020107 AT4G32730.1 42.453 106 60 1 13 118 85 189 1.24e-23 101
MsaG020107 AT4G32730.1 33.333 114 74 2 15 127 35 147 1.08e-13 72.0
MsaG020107 AT2G23290.1 44.660 103 56 1 15 117 13 114 1.46e-23 98.2
MsaG020107 AT5G17800.1 38.462 143 80 3 10 145 83 224 1.49e-23 98.6
MsaG020107 AT3G29020.1 34.722 144 91 2 15 158 65 205 1.66e-23 96.7
MsaG020107 AT3G29020.2 36.220 127 80 1 15 141 67 192 1.79e-23 98.2
MsaG020107 AT1G18960.1 42.276 123 59 4 6 125 4 117 2.63e-23 97.8
MsaG020107 AT1G73410.2 50.485 103 48 2 15 116 6 106 4.31e-23 94.7
MsaG020107 AT2G25230.1 30.942 223 117 8 9 202 20 234 5.53e-23 95.1
MsaG020107 AT3G55730.1 34.783 161 85 5 15 158 56 213 6.13e-23 97.8
MsaG020107 AT2G39880.1 45.283 106 49 2 15 116 50 150 1.15e-22 96.7
MsaG020107 AT1G66380.2 56.098 82 36 0 12 93 7 88 9.33e-22 88.6
MsaG020107 AT1G71030.2 56.061 66 29 0 52 117 5 70 4.99e-21 88.6
MsaG020107 AT1G71030.1 56.061 66 29 0 52 117 19 84 7.16e-21 88.6
MsaG020107 AT5G39700.1 41.322 121 64 2 8 125 49 165 8.80e-21 88.2
MsaG020107 AT2G37630.1 40.367 109 63 1 18 124 7 115 2.94e-20 90.1
MsaG020107 AT5G40430.1 41.880 117 63 4 2 117 41 153 8.43e-20 87.0
MsaG020107 AT4G00540.2 39.640 111 61 3 13 119 101 209 2.64e-18 84.7
MsaG020107 AT4G00540.2 33.058 121 73 2 15 127 46 166 2.62e-12 67.0
MsaG020107 AT4G00540.1 38.393 112 61 2 13 119 99 207 4.39e-18 84.3
MsaG020107 AT4G00540.1 33.058 121 73 2 15 127 44 164 3.15e-12 67.0
MsaG020107 AT1G14350.2 35.507 138 79 3 17 153 27 155 2.32e-17 82.4
MsaG020107 AT1G14350.1 35.507 138 79 3 17 153 27 155 2.32e-17 82.4
MsaG020107 AT3G18100.1 33.333 123 76 2 14 136 545 661 5.32e-16 79.0
MsaG020107 AT2G02820.1 39.423 104 60 2 17 119 32 133 6.07e-16 78.2
MsaG020107 AT2G02820.2 37.963 108 64 2 17 123 32 137 6.53e-16 78.2
MsaG020107 AT3G18100.3 33.333 123 76 2 14 136 497 613 7.49e-16 78.2
MsaG020107 AT2G02820.3 38.889 108 63 2 17 123 32 137 7.90e-16 77.0
MsaG020107 AT3G18100.4 33.333 123 76 2 14 136 384 500 1.02e-15 77.8
MsaG020107 AT3G18100.2 33.333 123 76 2 14 136 332 448 1.41e-15 77.4
MsaG020107 AT5G59780.1 59.574 47 19 0 71 117 1 47 4.35e-14 69.3
MsaG020107 AT3G46130.2 59.574 47 19 0 71 117 1 47 6.20e-14 69.3
MsaG020107 AT4G25560.2 60.870 46 18 0 71 116 2 47 3.86e-13 67.8
MsaG020107 AT1G14350.3 36.082 97 55 1 57 153 23 112 2.20e-11 64.3
MsaG020107 AT1G14350.4 36.082 97 55 1 57 153 23 112 2.20e-11 64.3

Find 52 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCGTGGGTGAAAGATTT+TGG 0.122547 4:-44640484 MsaT020107.1:CDS
ACCACTTATGTGGATGATTT+TGG 0.182493 4:-44640527 MsaT020107.1:CDS
CAATATTCCACTTGGTATAT+TGG 0.195479 4:+44640451 None:intergenic
TGTGATCAACTCTCTTCTTT+AGG 0.212201 4:+44640729 None:intergenic
GCCGGTGATGTCTGAGGTTT+TGG 0.267080 4:+44640610 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4:-44641106 MsaT020107.1:CDS
CGCCAACTTCCCAAGTTTGC+AGG 0.293097 4:-44641070 MsaT020107.1:intron
GTGATCAACTCTCTTCTTTA+GGG 0.294729 4:+44640730 None:intergenic
TAGTATATGATGAGGATATT+TGG 0.326391 4:-44640196 MsaT020107.1:CDS
ATCCAAAACAAAATTTATAT+CGG 0.338537 4:+44640355 None:intergenic
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4:+44640773 None:intergenic
GATGAAGCAAGTGGTGATAA+AGG 0.340172 4:+44640587 None:intergenic
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4:-44641093 MsaT020107.1:CDS
ATTTATATCGGATGAATGAT+TGG 0.348262 4:+44640367 None:intergenic
ACATTGAATCCACAAAAGAT+AGG 0.404787 4:-44640670 MsaT020107.1:CDS
ATATTAATTACCTGCAAACT+TGG 0.407998 4:+44641060 None:intergenic
CATGGACTGCTGAAGAAGAT+AGG 0.410291 4:-44641135 MsaT020107.1:CDS
ATAATGAAGTGAAGAACTAT+TGG 0.433566 4:-44640760 MsaT020107.1:CDS
TCCATTGCGGCCGAGTTACC+TGG 0.444960 4:-44640791 MsaT020107.1:CDS
TTTATATCGGATGAATGATT+GGG 0.450617 4:+44640368 None:intergenic
ATGTCACTAGATATGGTTGC+TGG 0.454705 4:-44641099 MsaT020107.1:CDS
TCGGCAAAGGTGTCAACAAT+TGG 0.456227 4:+44640240 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4:+44641068 None:intergenic
CTAAGACCTAATATCAAAAG+AGG 0.476128 4:-44640881 MsaT020107.1:CDS
ACCAAAATCATCCACATAAG+TGG 0.485724 4:+44640526 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4:+44640781 None:intergenic
ATGAAGCAAGTGGTGATAAA+GGG 0.492786 4:+44640588 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4:-44640934 MsaT020107.1:intron
ATTGTTGACACCTTTGCCGA+TGG 0.512851 4:-44640237 MsaT020107.1:CDS
TCCAGGTAACTCGGCCGCAA+TGG 0.515613 4:+44640790 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4:-44640935 MsaT020107.1:intron
TATTAATTACCTGCAAACTT+GGG 0.536627 4:+44641061 None:intergenic
CATTGAATCCACAAAAGATA+GGG 0.551489 4:-44640669 MsaT020107.1:CDS
TTCCACTTGGTATATTGGAA+AGG 0.554521 4:+44640456 None:intergenic
AGATCACAGTACCACTTATG+TGG 0.565693 4:-44640537 MsaT020107.1:CDS
GGAAGAGTTGTAGATTGAGA+TGG 0.566126 4:-44640913 MsaT020107.1:CDS
ATCCCAAAATCTTTCACCCA+CGG 0.566533 4:+44640481 None:intergenic
TGGAGGAGTAACTTGATGAA+AGG 0.568052 4:+44640640 None:intergenic
TATTCAGATTCCATCGGCAA+AGG 0.574722 4:+44640227 None:intergenic
AAACTTCACTCAACAAGAAG+AGG 0.574927 4:-44640858 MsaT020107.1:CDS
TTGTTCTGCAATATTCCACT+TGG 0.581496 4:+44640443 None:intergenic
AGATGAAATTATAGAATCCG+TGG 0.583848 4:-44640498 MsaT020107.1:CDS
AGCAAGTGGTGATAAAGGGC+CGG 0.591439 4:+44640592 None:intergenic
GTGGAATCAGGAAAGGAACA+TGG 0.591827 4:-44641153 MsaT020107.1:CDS
TCCAAAACCTCAGACATCAC+CGG 0.627605 4:-44640611 MsaT020107.1:CDS
GAATAGATGGTCATCCATTG+CGG 0.633326 4:-44640804 MsaT020107.1:CDS
GACCTTTCCAATATACCAAG+TGG 0.637324 4:-44640458 MsaT020107.1:CDS
AATTCACTTGATGAAGCAAG+TGG 0.639681 4:+44640578 None:intergenic
GATGAAATTATAGAATCCGT+GGG 0.646480 4:-44640497 MsaT020107.1:CDS
TAAAGGGCCGGTGATGTCTG+AGG 0.656668 4:+44640604 None:intergenic
ACTGTGATCTGAATAATCTG+TGG 0.669958 4:+44640550 None:intergenic
TCAACAATTGGCTTGAAACG+TGG 0.673906 4:+44640252 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr4 gene 44640190 44641206 44640190 ID=MsaG020107
Chr4 mRNA 44640190 44641206 44640190 ID=MsaT020107.1;Parent=MsaG020107
Chr4 exon 44640190 44640950 44640190 ID=MsaT020107.1.exon2;Parent=MsaT020107.1
Chr4 CDS 44640190 44640950 44640190 ID=cds.MsaT020107.1;Parent=MsaT020107.1
Chr4 exon 44641071 44641206 44641071 ID=MsaT020107.1.exon1;Parent=MsaT020107.1
Chr4 CDS 44641071 44641206 44641071 ID=cds.MsaT020107.1;Parent=MsaT020107.1
Gene Sequence

>MsaT020107.1

ATGGCAAGAACTCCTTCATGTGACAAAAAAAGTGGAATCAGGAAAGGAACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGATGGATGAATTATCTAAGACCTAATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAGTTGATTATCAGAATGCATAAAAAGCTTGGGAATAGATGGTCATCCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACTATTGGCATACTTCCCTAAAGAAGAGAGTTGATCACAACGAAATCACAAATATTGAAGAAACCAAATCAAAAGACATTGAATCCACAAAAGATAGGGATATTTCCTTTCATCAAGTTACTCCTCCAGCTAGTTCCAAAACCTCAGACATCACCGGCCCTTTATCACCACTTGCTTCATCAAGTGAATTCTCTTCCACAGATTATTCAGATCACAGTACCACTTATGTGGATGATTTTGGTTTTCTAGATGAAATTATAGAATCCGTGGGTGAAAGATTTTGGGATGACCTTTCCAATATACCAAGTGGAATATTGCAGAACAATACTAATTATAATTTTAAAAATCAAGATGCTAATGTTGGTTTTTTAGTGTCTCCCAATCATTCATCCGATATAAATTTTGTTTTGGATAATGATTTTGGAAGCTTTGTAGATACATACGAGTCAACAATTGATAGTTTTTGGACACAATCATATGAAGCTGACATGCACCACGTTTCAAGCCAATTGTTGACACCTTTGCCGATGGAATCTGAATATTTTTCTATAGTATATGATGAGGATATTTGGAGTTGA
Protein sequence

>MsaT020107.1

MARTPSCDKKSGIRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWMNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSSIAAELPGRTDNEVKNYWHTSLKKRVDHNEITNIEETKSKDIESTKDRDISFHQVTPPASSKTSDITGPLSPLASSSEFSSTDYSDHSTTYVDDFGFLDEIIESVGERFWDDLSNIPSGILQNNTNYNFKNQDANVGFLVSPNHSSDINFVLDNDFGSFVDTYESTIDSFWTQSYEADMHHVSSQLLTPLPMESEYFSIVYDEDIWS*