AlfalfaGEDB | MsaG020230

M. sativa ssp. caerulea / MsaG020230

KEGG: K15083
GO: GO:0000109 GO:0000166 GO:0000720 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004842 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006290 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016740 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019538 GO:0019787 GO:0030554 GO:0032392 GO:0032446 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0036211 GO:0042623 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051276 GO:0051716 GO:0061630 GO:0061659 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0097367 GO:0140096 GO:0140097 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1990391
PFAM: PF00176.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020230	XP_003605955.1	95.936	935	15	2	1	912	1	935	0.0	1848

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020230	sp\|P79051\|RHP16_SCHPO	41.655	713	308	14	207	910	246	859	1.82e-168	515

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020230	tr\|G7JEP7\|G7JEP7_MEDTR	95.936	935	15	2	1	912	1	935	0.0	1848

TFs/TRs:

Gene ID	Type	Classification
MsaG020230	TR	SNF2

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000431	MsaG020230	0.835896	2.346521e-56	8.073760e-54
MsaG000519	MsaG020230	0.815861	1.290139e-51	2.548864e-49
MsaG001531	MsaG020230	0.813083	5.274079e-51	9.716344e-49
MsaG003468	MsaG020230	0.825875	6.564695e-54	1.691840e-51
MsaG003513	MsaG020230	0.809638	2.927603e-50	4.955968e-48
MsaG004006	MsaG020230	0.809814	2.683492e-50	4.562230e-48
MsaG003926	MsaG020230	0.815602	1.472758e-51	2.890685e-49
MsaG005154	MsaG020230	0.802673	8.434247e-49	1.211679e-46
MsaG005991	MsaG020230	0.800509	2.331142e-48	3.188280e-46
MsaG005966	MsaG020230	0.803931	4.642230e-49	6.865645e-47
MsaG006500	MsaG020230	0.856448	6.204266e-62	4.225179e-59
MsaG006601	MsaG020230	0.802103	1.103476e-48	1.564674e-46
MsaG007322	MsaG020230	0.865396	1.218220e-64	1.169207e-61
MsaG007387	MsaG020230	0.802453	9.358693e-49	1.337722e-46
MsaG007879	MsaG020230	0.819620	1.846909e-52	4.021094e-50
MsaG007914	MsaG020230	0.811183	1.363276e-50	2.396280e-48
MsaG008017	MsaG020230	0.825892	6.502681e-54	1.676679e-51
MsaG008222	MsaG020230	0.843107	3.201172e-58	1.379281e-55
MsaG008996	MsaG020230	0.813429	4.430234e-51	8.232880e-49
MsaG010394	MsaG020230	0.822967	3.147306e-53	7.491631e-51
MsaG010460	MsaG020230	0.803217	6.517596e-49	9.481265e-47
MsaG011584	MsaG020230	0.855359	1.287200e-61	8.424166e-59
MsaG012106	MsaG020230	0.815419	1.616344e-51	3.157907e-49
MsaG014927	MsaG020230	0.803530	5.617152e-49	8.230769e-47
MsaG017081	MsaG020230	0.859578	7.364552e-63	5.634806e-60
MsaG017337	MsaG020230	0.807764	7.329066e-50	1.185959e-47
MsaG018085	MsaG020230	0.821781	5.917505e-53	1.364291e-50
MsaG018754	MsaG020230	0.812237	8.060106e-51	1.453875e-48
MsaG019076	MsaG020230	0.834952	4.054438e-56	1.356086e-53
MsaG020230	MsaG020812	0.844554	1.316704e-58	5.945534e-56
MsaG020230	MsaG021668	0.814876	2.131261e-51	4.107042e-49
MsaG020230	MsaG021629	0.801983	1.168121e-48	1.651829e-46
MsaG020230	MsaG022440	0.800810	2.025236e-48	2.788827e-46
MsaG020230	MsaG024010	0.808648	4.758927e-50	7.866342e-48
MsaG020230	MsaG024291	0.817633	5.188622e-52	1.072749e-49
MsaG020230	MsaG025691	0.800836	2.000555e-48	2.756426e-46
MsaG020230	MsaG026624	0.817863	4.606525e-52	9.580950e-50
MsaG020230	MsaG026985	0.819272	2.215315e-52	4.779707e-50
MsaG020230	MsaG027984	0.826197	5.508660e-54	1.432384e-51
MsaG020230	MsaG028335	0.832779	1.408929e-55	4.418962e-53
MsaG020230	MsaG029188	0.805731	1.960688e-49	3.023566e-47
MsaG020230	MsaG029204	0.820243	1.332474e-52	2.949642e-50
MsaG020230	MsaG030198	0.840820	1.278796e-57	5.122316e-55
MsaG020230	MsaG030471	0.801272	1.630996e-48	2.269424e-46
MsaG020230	MsaG031126	0.840542	1.510786e-57	5.999062e-55
MsaG020230	MsaG033746	0.808145	6.085632e-50	9.938155e-48
MsaG020230	MsaG034836	0.832394	1.753345e-55	5.437642e-53
MsaG020230	MsaG035057	0.827424	2.814463e-54	7.572936e-52
MsaG020230	MsaG036065	0.836521	1.630189e-56	5.715475e-54
MsaG020230	MsaG039962	0.801261	1.639384e-48	2.280531e-46
MsaG020230	MsaG043663	0.812407	7.402856e-51	1.341053e-48
MsaG020230	MsaG045380	0.806234	1.539148e-49	2.401876e-47
MsaG020230	MsaG046205	0.810201	2.217314e-50	3.805066e-48
MsaG020230	MsaG046311	0.806281	1.504377e-49	2.350270e-47
MsaG020230	MsaG046381	0.806874	1.129203e-49	1.788906e-47
MsaG020230	MsaG046588	0.800670	2.162677e-48	2.968737e-46
MsaG020230	MsaG046630	0.809850	2.637350e-50	4.487576e-48
MsaG020230	MsaG004129	0.809301	3.454999e-50	5.801086e-48
MsaG020230	MsaG002035	0.803946	4.609364e-49	6.819359e-47
MsaG020230	MsaG007590	0.833612	8.757682e-56	2.814826e-53
MsaG020230	MsaG011183	0.818666	3.037522e-52	6.450222e-50
MsaG020230	MsaG013257	0.807548	8.141531e-50	1.310597e-47
MsaG020230	MsaG014993	0.831066	3.712671e-55	1.107789e-52
MsaG020230	MsaG012091	0.822570	3.889716e-53	9.159832e-51
MsaG020230	MsaG012695	0.819883	1.609245e-52	3.528243e-50
MsaG020230	MsaG029390	0.816235	1.065031e-51	2.124361e-49
MsaG020230	MsaG032931	0.815080	1.920950e-51	3.720802e-49
MsaG020230	MsaG032699	0.803107	6.867821e-49	9.965404e-47
MsaG020230	MsaG032481	0.819187	2.315975e-52	4.985807e-50
MsaG020230	MsaG032473	0.800543	2.295216e-48	3.141544e-46
MsaG020230	MsaG037384	0.800827	2.009442e-48	2.768074e-46
MsaG020230	MsaG037161	0.800470	2.374641e-48	3.244900e-46
MsaG020230	MsaG035677	0.812527	6.970429e-51	1.266499e-48
MsaG020230	MsaG039501	0.835907	2.331947e-56	8.026180e-54
MsaG020230	MsaG043142	0.820369	1.246651e-52	2.768855e-50
MsaG020230	MsaG046885	0.810942	1.536410e-50	2.684718e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020230	MtrunA17_Chr4g0024921	95.936	935	15	2	1	912	1	935	0.0	1848
MsaG020230	MtrunA17_Chr1g0212331	30.486	843	405	24	187	911	260	1039	9.40e-97	327
MsaG020230	MtrunA17_Chr2g0320751	30.876	719	357	19	234	910	395	1015	3.35e-93	317
MsaG020230	MtrunA17_Chr2g0281601	30.389	849	408	25	179	911	521	1302	7.88e-93	320
MsaG020230	MtrunA17_Chr1g0168031	33.152	552	250	16	423	910	656	1152	1.22e-81	286
MsaG020230	MtrunA17_Chr1g0168031	34.921	126	75	3	230	348	527	652	1.48e-13	75.1
MsaG020230	MtrunA17_Chr7g0255821	29.622	503	280	13	432	910	368	820	2.66e-60	220
MsaG020230	MtrunA17_Chr7g0255821	32.231	121	78	1	236	356	249	365	1.34e-15	81.6
MsaG020230	MtrunA17_Chr5g0403921	41.176	119	69	1	761	878	524	642	2.28e-23	106
MsaG020230	MtrunA17_Chr1g0175191	36.667	150	90	2	761	906	1080	1228	1.71e-22	104
MsaG020230	MtrunA17_Chr1g0163011	35.417	144	91	1	740	883	569	710	6.33e-21	98.6
MsaG020230	MtrunA17_Chr2g0286291	40.769	130	74	2	755	883	506	633	2.77e-20	97.1
MsaG020230	MtrunA17_Chr4g0066741	39.394	132	77	2	753	883	501	630	6.74e-20	95.9
MsaG020230	MtrunA17_Chr4g0017211	31.013	158	106	1	758	912	1827	1984	1.35e-19	95.1
MsaG020230	MtrunA17_Chr4g0017211	32.222	180	100	7	166	343	1406	1565	3.52e-12	70.9
MsaG020230	MtrunA17_Chr5g0428401	26.537	309	171	11	656	911	1349	1654	1.42e-19	95.1
MsaG020230	MtrunA17_Chr7g0257101	32.867	143	91	1	756	893	1205	1347	2.60e-19	94.0
MsaG020230	MtrunA17_Chr5g0394201	38.462	130	77	2	756	883	685	813	6.16e-19	92.8
MsaG020230	MtrunA17_Chr4g0052341	32.121	165	105	4	737	896	1056	1218	4.94e-18	90.1
MsaG020230	MtrunA17_Chr1g0205891	36.154	130	80	2	756	883	699	827	1.20e-17	88.6
MsaG020230	MtrunA17_Chr8g0384531	32.667	150	100	1	761	910	758	906	1.38e-17	88.2
MsaG020230	MtrunA17_Chr5g0442141	35.333	150	91	3	761	907	951	1097	4.50e-17	87.0
MsaG020230	MtrunA17_Chr8g0348721	34.416	154	96	3	748	900	1319	1468	7.20e-17	86.3
MsaG020230	MtrunA17_Chr7g0232121	30.366	191	114	3	738	911	362	550	8.98e-17	85.5
MsaG020230	MtrunA17_Chr3g0095091	35.333	150	91	3	761	907	905	1051	1.30e-16	85.5
MsaG020230	MtrunA17_Chr4g0040301	32.353	136	92	0	761	896	398	533	1.90e-16	84.3
MsaG020230	MtrunA17_Chr7g0231521	29.843	191	115	3	738	911	283	471	2.62e-16	84.0
MsaG020230	MtrunA17_Chr4g0066651	38.400	125	74	2	761	883	1326	1449	7.87e-16	82.8
MsaG020230	MtrunA17_Chr5g0393461	33.108	148	97	2	738	884	535	681	2.93e-15	80.5
MsaG020230	MtrunA17_Chr7g0248031	32.468	154	99	3	748	900	1327	1476	6.35e-15	80.1
MsaG020230	MtrunA17_Chr3g0137091	31.544	149	99	3	751	897	618	765	7.24e-15	79.7
MsaG020230	MtrunA17_Chr4g0069451	28.571	154	106	2	723	876	454	603	8.23e-15	79.0
MsaG020230	MtrunA17_Chr1g0183681	30.833	120	83	0	761	880	753	872	7.40e-14	76.3
MsaG020230	MtrunA17_Chr3g0083491	30.252	119	81	2	761	879	1171	1287	1.37e-12	72.0
MsaG020230	MtrunA17_Chr7g0233001	32.911	158	94	4	761	907	339	495	1.44e-12	71.2
MsaG020230	MtrunA17_Chr2g0320781	32.911	158	94	5	727	874	75	230	5.28e-12	67.0
MsaG020230	MtrunA17_Chr1g0190381	33.099	142	81	2	757	884	202	343	7.83e-12	68.9
MsaG020230	MtrunA17_Chr3g0086111	26.744	172	123	1	741	909	529	700	8.42e-12	69.7
MsaG020230	MtrunA17_Chr7g0225791	36.232	138	76	4	761	887	1104	1240	8.88e-12	69.3
MsaG020230	MtrunA17_Chr4g0047081	35.036	137	79	3	761	887	1054	1190	1.50e-11	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020230	AT1G05120.1	66.117	788	226	10	149	912	63	833	0.0	1060
MsaG020230	AT1G05120.2	66.117	788	226	10	149	912	106	876	0.0	1058
MsaG020230	AT1G02670.6	58.097	494	156	5	420	910	217	662	0.0	571
MsaG020230	AT1G02670.6	54.248	153	56	1	197	349	77	215	4.46e-41	161
MsaG020230	AT1G02670.3	58.097	494	156	5	420	910	244	689	0.0	570
MsaG020230	AT1G02670.3	54.248	153	56	1	197	349	104	242	6.22e-41	161
MsaG020230	AT1G02670.5	58.296	446	136	4	420	863	217	614	1.72e-175	522
MsaG020230	AT1G02670.5	53.416	161	60	2	190	349	69	215	3.29e-41	161
MsaG020230	AT1G02670.2	58.296	446	136	4	420	863	244	641	8.00e-175	521
MsaG020230	AT1G02670.2	54.248	153	56	1	197	349	104	242	4.66e-41	161
MsaG020230	AT1G02670.1	50.810	494	169	7	420	910	255	677	2.08e-148	454
MsaG020230	AT1G02670.1	54.248	153	56	1	197	349	115	253	4.49e-41	162
MsaG020230	AT1G02670.7	50.810	494	169	7	420	910	244	666	2.96e-148	454
MsaG020230	AT1G02670.7	54.248	153	56	1	197	349	104	242	3.97e-41	162
MsaG020230	AT1G61140.3	32.317	820	395	23	183	911	369	1119	1.64e-104	350
MsaG020230	AT1G61140.1	32.317	820	395	23	183	911	527	1277	1.52e-103	350
MsaG020230	AT1G50410.2	30.769	858	391	24	183	911	197	980	3.36e-101	338
MsaG020230	AT1G50410.1	30.769	858	391	24	183	911	197	980	3.36e-101	338
MsaG020230	AT1G50410.3	30.769	858	391	24	183	911	197	980	3.36e-101	338
MsaG020230	AT3G20010.3	30.678	841	391	22	202	911	1	780	6.86e-100	330
MsaG020230	AT1G02670.4	50.456	329	113	4	420	746	244	524	2.97e-98	318
MsaG020230	AT1G02670.4	54.248	153	56	1	197	349	104	242	7.18e-42	161
MsaG020230	AT3G20010.1	30.569	844	394	22	199	911	264	1046	1.50e-97	330
MsaG020230	AT3G20010.5	30.569	844	394	22	199	911	264	1046	1.50e-97	330
MsaG020230	AT3G20010.7	30.569	844	394	22	199	911	264	1046	1.50e-97	330
MsaG020230	AT1G11100.3	31.119	813	396	26	197	911	380	1126	2.94e-94	322
MsaG020230	AT3G20010.2	30.473	804	369	21	237	911	13	755	1.54e-93	312
MsaG020230	AT1G11100.4	31.081	814	395	26	197	911	523	1269	1.80e-93	322
MsaG020230	AT1G11100.2	31.081	814	395	26	197	911	522	1268	2.06e-93	322
MsaG020230	AT5G22750.1	31.397	723	345	21	234	910	411	1028	7.34e-91	311
MsaG020230	AT5G43530.1	33.977	518	260	8	425	910	809	1276	5.36e-84	295
MsaG020230	AT5G43530.1	34.921	126	72	2	234	349	679	804	2.73e-14	78.2
MsaG020230	AT3G16600.1	29.772	702	310	26	212	892	49	588	1.10e-68	241
MsaG020230	AT1G11100.5	31.306	559	268	17	427	911	566	1082	6.05e-68	246
MsaG020230	AT1G11100.5	37.079	178	86	6	197	351	380	554	3.74e-20	97.1
MsaG020230	AT1G11100.1	30.590	559	272	17	427	911	709	1225	2.47e-65	239
MsaG020230	AT1G11100.1	35.593	177	90	4	197	351	523	697	4.32e-20	97.1
MsaG020230	AT1G50410.4	27.984	754	344	22	183	810	197	877	1.76e-63	231
MsaG020230	AT5G05130.1	30.498	482	270	11	420	884	419	852	2.26e-58	216
MsaG020230	AT1G61140.2	31.827	531	245	17	183	663	534	997	8.58e-52	197
MsaG020230	AT3G20010.4	28.693	589	295	16	287	810	415	943	4.13e-51	195
MsaG020230	AT3G20010.6	28.693	589	295	16	287	810	415	943	4.13e-51	195
MsaG020230	AT3G20010.8	28.693	589	295	16	287	810	415	943	4.13e-51	195
MsaG020230	AT2G02090.1	24.783	690	341	25	215	891	211	735	3.74e-32	134
MsaG020230	AT5G66750.1	42.857	119	67	1	761	878	542	660	4.30e-24	109
MsaG020230	AT2G40770.2	27.338	278	178	7	656	912	1341	1615	7.97e-24	109
MsaG020230	AT2G40770.1	27.338	278	178	7	656	912	1341	1615	7.97e-24	109
MsaG020230	AT2G40770.3	27.338	278	178	7	656	912	1341	1615	7.97e-24	109
MsaG020230	AT3G12810.1	37.984	129	80	0	758	886	1090	1218	5.76e-23	106
MsaG020230	AT3G12810.2	37.984	129	80	0	758	886	1086	1214	6.01e-23	106
MsaG020230	AT3G57300.1	31.847	157	106	1	756	911	1219	1375	8.08e-20	96.3
MsaG020230	AT3G57300.4	31.847	157	106	1	756	911	1219	1375	8.08e-20	96.3
MsaG020230	AT3G57300.2	31.847	157	106	1	756	911	1252	1408	9.58e-20	95.9
MsaG020230	AT3G06400.2	39.231	130	76	2	755	883	504	631	1.04e-19	95.5
MsaG020230	AT3G06400.3	39.231	130	76	2	755	883	504	631	1.09e-19	95.5
MsaG020230	AT3G06400.1	39.231	130	76	2	755	883	504	631	1.12e-19	95.5
MsaG020230	AT5G18620.2	38.400	125	76	1	760	883	512	636	1.27e-19	95.5
MsaG020230	AT5G18620.1	38.400	125	76	1	760	883	512	636	1.30e-19	95.1
MsaG020230	AT2G44980.1	35.000	160	101	2	738	896	365	522	6.62e-19	92.8
MsaG020230	AT3G54280.1	29.747	158	108	1	758	912	1829	1986	7.11e-19	93.2
MsaG020230	AT5G63950.2	33.333	150	99	1	761	910	733	881	7.65e-19	92.8
MsaG020230	AT5G63950.1	33.333	150	99	1	761	910	750	898	8.41e-19	92.8
MsaG020230	AT3G54280.2	29.747	158	108	1	758	912	1860	2017	9.18e-19	92.8
MsaG020230	AT2G44980.2	32.941	170	101	2	738	896	374	541	1.03e-17	89.0
MsaG020230	AT2G44980.3	32.941	170	101	2	738	896	373	540	1.04e-17	89.0
MsaG020230	AT1G03750.1	34.307	137	90	0	761	897	546	682	1.94e-17	88.2
MsaG020230	AT5G19310.2	37.600	125	75	2	761	883	449	572	2.07e-17	87.8
MsaG020230	AT5G19310.1	37.600	125	75	2	761	883	713	836	2.46e-17	87.8
MsaG020230	AT5G44800.1	36.719	128	79	2	761	886	1022	1149	2.50e-17	88.2
MsaG020230	AT3G06010.1	35.385	130	81	2	756	883	726	854	5.26e-17	87.0
MsaG020230	AT2G13370.1	34.899	149	91	3	756	901	952	1097	8.06e-17	86.7
MsaG020230	AT2G13370.2	34.899	149	91	3	756	901	952	1097	8.06e-17	86.7
MsaG020230	AT2G13370.3	34.899	149	91	3	756	901	952	1097	8.06e-17	86.7
MsaG020230	AT3G54460.2	32.258	124	83	1	761	884	898	1020	1.61e-16	85.1
MsaG020230	AT3G54460.1	32.258	124	83	1	761	884	1195	1317	1.78e-16	85.1
MsaG020230	AT3G19210.1	32.716	162	104	2	754	910	546	707	4.28e-16	84.0
MsaG020230	AT3G19210.2	32.716	162	104	2	754	910	544	705	4.58e-16	83.6
MsaG020230	AT3G19210.3	32.716	162	104	2	754	910	546	707	5.33e-16	83.2
MsaG020230	AT2G28290.5	37.903	124	76	1	761	883	1092	1215	7.18e-16	83.6
MsaG020230	AT2G28290.3	37.903	124	76	1	761	883	1091	1214	7.30e-16	83.6
MsaG020230	AT2G28290.4	37.903	124	76	1	761	883	1091	1214	7.30e-16	83.6
MsaG020230	AT2G28290.1	37.903	124	76	1	761	883	1091	1214	7.31e-16	83.6
MsaG020230	AT2G28290.6	37.903	124	76	1	761	883	1092	1215	7.75e-16	83.6
MsaG020230	AT2G28290.2	37.903	124	76	1	761	883	1091	1214	8.15e-16	83.6
MsaG020230	AT2G46020.5	33.766	154	97	3	748	900	1313	1462	1.03e-15	82.8
MsaG020230	AT2G46020.1	33.766	154	97	3	748	900	1313	1462	1.03e-15	82.8
MsaG020230	AT2G46020.6	33.766	154	97	3	748	900	1313	1462	1.03e-15	82.8
MsaG020230	AT2G46020.2	33.766	154	97	3	748	900	1314	1463	1.09e-15	82.8
MsaG020230	AT2G46020.3	33.766	154	97	3	748	900	1314	1463	1.09e-15	82.8
MsaG020230	AT2G46020.4	33.766	154	97	3	748	900	1314	1463	1.09e-15	82.8
MsaG020230	AT2G18760.4	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.1	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.2	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.7	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.5	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.6	31.034	145	98	1	736	880	722	864	1.54e-15	82.0
MsaG020230	AT2G18760.3	31.034	145	98	1	736	880	781	923	1.84e-15	82.0
MsaG020230	AT1G48310.1	26.984	189	134	2	710	898	439	623	1.23e-14	78.6
MsaG020230	AT2G25170.1	32.414	145	95	3	751	893	602	745	1.30e-14	79.3
MsaG020230	AT2G25170.4	32.414	145	95	3	751	893	602	745	1.30e-14	79.3
MsaG020230	AT1G48310.2	26.984	189	134	2	710	898	444	628	1.34e-14	78.6
MsaG020230	AT2G25170.2	32.414	145	95	3	751	893	619	762	1.43e-14	79.0
MsaG020230	AT2G25170.3	32.414	145	95	3	751	893	628	771	1.62e-14	79.0
MsaG020230	AT1G48310.3	28.571	161	111	2	723	883	452	608	1.67e-14	78.2
MsaG020230	AT4G31900.3	28.472	144	101	2	751	892	531	674	8.34e-14	76.6
MsaG020230	AT4G31900.1	28.472	144	101	2	751	892	531	674	9.10e-14	76.3
MsaG020230	AT4G31900.2	28.472	144	101	2	751	892	490	633	1.09e-13	76.3
MsaG020230	AT1G08600.4	34.507	142	79	2	757	884	1129	1270	1.79e-12	72.4
MsaG020230	AT1G08600.3	34.507	142	79	2	757	884	1129	1270	1.79e-12	72.4
MsaG020230	AT1G08600.2	34.507	142	79	2	757	884	1129	1270	1.79e-12	72.4
MsaG020230	AT1G08600.1	34.507	142	79	2	757	884	1108	1249	1.80e-12	72.4
MsaG020230	AT1G05490.1	36.975	119	69	2	761	873	1217	1335	3.59e-11	68.2

Find 214 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATTTACTACCTCTCTTTC+TGG	0.110785	4:-47598662	None:intergenic
GAGAGAAGAAATTAGATTTA+TGG	0.174362	4:+47603777	MsaT020230.1:intron
TGATAAAACAACAACAATTA+AGG	0.177264	4:+47603317	MsaT020230.1:CDS
ATCATCAGTAAATTTCTTAA+TGG	0.256211	4:-47604015	None:intergenic
TAGCCAGTTCACATCATTCT+TGG	0.257616	4:+47603834	MsaT020230.1:CDS
TCAGCACTCTTCCATCTCTT+TGG	0.267531	4:-47599327	None:intergenic
ACAGTCCTTGCACAGGTTAT+AGG	0.302494	4:-47600352	None:intergenic
GAAATAATCTTCCACAATAT+TGG	0.305287	4:-47599440	None:intergenic
CCAACTGCAGCAGCACTAAA+AGG	0.314994	4:+47602965	MsaT020230.1:CDS
TGTTGGAGAGCTATATTCTT+TGG	0.317103	4:+47600143	MsaT020230.1:CDS
CCTTAGATTCTTTCTACAAA+TGG	0.320894	4:+47600091	MsaT020230.1:CDS
GAAAGGAAGCACGAAGGTTC+TGG	0.322638	4:+47599293	MsaT020230.1:CDS
CTTGCACAGGTTATAGGAAT+AGG	0.339208	4:-47600346	None:intergenic
CCAATTCAGTCATCCGGATA+TGG	0.347654	4:+47601052	MsaT020230.1:CDS
TGCCCTTGTCCTTGCTAAAC+GGG	0.353806	4:+47599125	MsaT020230.1:CDS
TGCCATAACAACACTGGTTT+AGG	0.358363	4:-47598871	None:intergenic
TTCATTGAGGAGGGATAGCC+TGG	0.360612	4:+47601275	MsaT020230.1:CDS
GTCTTTCTCCGTTTAGATGA+AGG	0.368755	4:-47598634	None:intergenic
CAGGCCCACAATAGTACTTC+TGG	0.374592	4:-47599485	None:intergenic
GGATGAATTAGCGGCTGATA+AGG	0.375599	4:+47598057	MsaT020230.1:intron
GCAGTTTGAACATACTTTAG+AGG	0.379174	4:-47600856	None:intergenic
CAGGTCTGTAGATTCTATCT+TGG	0.382698	4:-47598683	None:intergenic
GATAAAACAACAACAATTAA+GGG	0.383339	4:+47603318	MsaT020230.1:CDS
GATGAATTAGCGGCTGATAA+GGG	0.383814	4:+47598058	MsaT020230.1:intron
GTCTTAAGGCGAACTAAAAT+AGG	0.384212	4:+47601130	MsaT020230.1:CDS
TTGCCCTTGTCCTTGCTAAA+CGG	0.387044	4:+47599124	MsaT020230.1:CDS
ATCCTAAACCAGTGTTGTTA+TGG	0.390596	4:+47598869	MsaT020230.1:CDS
CTTAGATTCTTTCTACAAAT+GGG	0.405018	4:+47600092	MsaT020230.1:CDS
TGAGCCTGACGCTCCACTGC+AGG	0.406678	4:-47605151	None:intergenic
GCTTCCGATGAAATCGATTC+TGG	0.406863	4:+47597027	MsaT020230.1:CDS
CCGTGGTTGCTGTCACTCAA+TGG	0.407106	4:+47599244	MsaT020230.1:CDS
CCATTTGTAGAAAGAATCTA+AGG	0.407862	4:-47600091	None:intergenic
AATTAGATTTATGGTTGAAA+GGG	0.410682	4:+47603786	MsaT020230.1:CDS
GGAGAATACACTACAAGATA+TGG	0.417545	4:-47602944	None:intergenic
GAATCACTGATGATTATAGT+AGG	0.417843	4:-47598568	None:intergenic
TTTCCCATCATCACCATATC+CGG	0.419503	4:-47601065	None:intergenic
TGGAATCCTTGCTGATGAAA+TGG	0.420074	4:+47599077	MsaT020230.1:CDS
GAACCCTGCAGTGGAGCGTC+AGG	0.431444	4:+47605147	MsaT020230.1:CDS
CCATATCCGGATGACTGAAT+TGG	0.433461	4:-47601052	None:intergenic
AGGTGTATCTTGCGTTCAAT+TGG	0.435373	4:+47603959	MsaT020230.1:CDS
CAAGTAAATTTACCTTCTGC+AGG	0.439021	4:-47603873	None:intergenic
TCAGACTAGTACTAAAATAG+AGG	0.440083	4:+47603386	MsaT020230.1:CDS
CTGATTCATCTGACTTTAGC+GGG	0.441027	4:+47598611	MsaT020230.1:CDS
ACGAAGGTTCTGGTTTATCA+TGG	0.441863	4:+47599303	MsaT020230.1:CDS
AACATATTCTACTGTGGAAT+CGG	0.445190	4:+47599380	MsaT020230.1:CDS
TGCAAGAAGCAGTACCTGAT+TGG	0.448107	4:-47605205	None:intergenic
CGTGGTTGCTGTCACTCAAT+GGG	0.456424	4:+47599245	MsaT020230.1:CDS
AAGAAGGAACTGGTATTTGA+AGG	0.457652	4:+47605395	MsaT020230.1:CDS
GTTGGATGGAGAGTTGGAAC+AGG	0.458440	4:+47599572	MsaT020230.1:CDS
AAGAAGGAAGAGGATTTAGA+AGG	0.458921	4:+47599606	MsaT020230.1:CDS
TGGTGTAGAGAGAGCGCTGC+TGG	0.459807	4:+47598741	MsaT020230.1:CDS
GTTAGCATGGGCTTTGAAGC+AGG	0.462620	4:+47599035	MsaT020230.1:CDS
ATCAACCACGGCATCCTTGT+TGG	0.463766	4:-47603298	None:intergenic
GGGTCTTGATTCAAGTCAAA+GGG	0.468248	4:-47598547	None:intergenic
TCATCCGGATATGGTGATGA+TGG	0.469925	4:+47601061	MsaT020230.1:CDS
AAGAGGTCAGAGTTCAAAGT+TGG	0.470704	4:+47599554	MsaT020230.1:CDS
AGGCACACTTTATAAAATCT+AGG	0.474017	4:+47600040	MsaT020230.1:intron
TTCTACAAATGGGCATTAAG+TGG	0.475480	4:+47600102	MsaT020230.1:CDS
ATTGCAGGACACTTGATCAT+AGG	0.475942	4:+47600376	MsaT020230.1:CDS
CCCATGCTAACCATTCCCTT+TGG	0.477200	4:-47599023	None:intergenic
TTCACCAGAAGTACTATTGT+GGG	0.478100	4:+47599481	MsaT020230.1:CDS
ATTTCCAATGGTTGCTGAAG+AGG	0.478344	4:+47598780	MsaT020230.1:CDS
AAACAACAACTCACGATCCT+AGG	0.479366	4:-47601178	None:intergenic
AAGACAGAATTCACCGGATA+GGG	0.480304	4:+47605173	MsaT020230.1:CDS
TGTGCAAGGACTGTGATTGC+AGG	0.481850	4:+47600361	MsaT020230.1:CDS
AGCACTAAAAGGTGGGAACT+TGG	0.482029	4:+47602976	MsaT020230.1:CDS
TTTGTTGTTCTAATAGCGTC+AGG	0.484997	4:-47599504	None:intergenic
CTTGAAACTTCAAGAGAAGA+AGG	0.485345	4:+47605379	MsaT020230.1:CDS
TTCCTTGGCAGCTTAGGTAA+AGG	0.488300	4:-47598817	None:intergenic
CCTTGCTGATGAAATGGGTA+TGG	0.490612	4:+47599083	MsaT020230.1:CDS
CCTCCTCACACGACTACGTC+AGG	0.490749	4:+47602236	MsaT020230.1:CDS
GGCGAATCTGAGTGTTCAAA+TGG	0.490917	4:-47599171	None:intergenic
AAATTAGATTTATGGTTGAA+AGG	0.491004	4:+47603785	MsaT020230.1:CDS
GCCACACCAATTCAGTCATC+CGG	0.492439	4:+47601046	MsaT020230.1:CDS
TTAGCGGGCCTTCATCTAAA+CGG	0.494439	4:+47598626	MsaT020230.1:CDS
TTAGGTAAAGGTAAATCAAA+TGG	0.496064	4:-47598805	None:intergenic
GTGGATCGATCAGAATTTGT+TGG	0.497726	4:+47598918	MsaT020230.1:CDS
ATTGCTCGATTTACTTTGAA+AGG	0.498988	4:+47599276	MsaT020230.1:CDS
ATCACTATACAATGAAAGTC+AGG	0.501026	4:+47601323	MsaT020230.1:CDS
TAAGGCGAACTAAAATAGGC+AGG	0.503491	4:+47601134	MsaT020230.1:CDS
CAGTGTTGTTATGGCATGCT+TGG	0.503619	4:+47598878	MsaT020230.1:CDS
TTCAAAGTTGGATGGAGAGT+TGG	0.508987	4:+47599566	MsaT020230.1:CDS
CTGATCTTGCACTTCCGCCT+AGG	0.509821	4:+47601161	MsaT020230.1:CDS
TTGGTTTGTACTGCCCTATC+CGG	0.512738	4:-47605186	None:intergenic
GTATCTTGCGTTCAATTGGT+TGG	0.516929	4:+47603963	MsaT020230.1:CDS
ACTTCAAGAGAAGAAGGAAC+TGG	0.518885	4:+47605385	MsaT020230.1:CDS
ACTGCTCCCACAGTTCTGTT+AGG	0.520133	4:+47600874	MsaT020230.1:CDS
TCTGATTCATCTGACTTTAG+CGG	0.521032	4:+47598610	MsaT020230.1:CDS
AGATTTATGGTTGAAAGGGA+TGG	0.521533	4:+47603790	MsaT020230.1:CDS
TTGCACAGGTTATAGGAATA+GGG	0.521546	4:-47600345	None:intergenic
AAGTATGACATTAACTGCTC+GGG	0.525278	4:+47603986	MsaT020230.1:CDS
ACAAGAGTTCCTTTGATCAC+AGG	0.527283	4:-47599213	None:intergenic
GAAGTATGACATTAACTGCT+CGG	0.528022	4:+47603985	MsaT020230.1:CDS
GATCCAAGAATGATGTGAAC+TGG	0.530325	4:-47603837	None:intergenic
TCCTTTGCCACTTCACAGCA+TGG	0.533401	4:-47599647	None:intergenic
TACCTTTACCTAAGCTGCCA+AGG	0.535158	4:+47598815	MsaT020230.1:CDS
GGCGGTTCTTCAGAGGCTCT+AGG	0.536140	4:+47605516	MsaT020230.1:CDS
TGACGATGAGTTATTTCCAA+TGG	0.537692	4:+47598768	MsaT020230.1:CDS
ACCAAAGGGAATGGTTAGCA+TGG	0.538231	4:+47599022	MsaT020230.1:CDS
CTCTCCAACACGATTCTGAA+GGG	0.541536	4:-47600130	None:intergenic
GGAATCCTTGCTGATGAAAT+GGG	0.542503	4:+47599078	MsaT020230.1:CDS
TTTGAACACTCAGATTCGCC+CGG	0.542748	4:+47599174	MsaT020230.1:CDS
CGAAGGTTCTGGTTTATCAT+GGG	0.543237	4:+47599304	MsaT020230.1:CDS
CTCTATCAAGAAGAAGGAAG+AGG	0.543970	4:+47599596	MsaT020230.1:CDS
ATCTGATTGTTCCGTTGCTG+AGG	0.544086	4:+47598998	MsaT020230.1:CDS
AAGGAAAAGTGCCAATATTG+TGG	0.545202	4:+47599429	MsaT020230.1:CDS
TCCGTTGCTGAGGTACCAAA+GGG	0.545426	4:+47599008	MsaT020230.1:CDS
GGAGCCTCTTCAGCAACCAT+TGG	0.547174	4:-47598784	None:intergenic
TCCATGCTGTGAAGTGGCAA+AGG	0.547473	4:+47599646	MsaT020230.1:CDS
GAGCCTGACGCTCCACTGCA+GGG	0.548002	4:-47605150	None:intergenic
GCGGTTCTTCAGAGGCTCTA+GGG	0.548516	4:+47605517	MsaT020230.1:CDS
TTCCGTTGCTGAGGTACCAA+AGG	0.548808	4:+47599007	MsaT020230.1:CDS
TAGGGCAGTACAAACCAATC+AGG	0.548999	4:+47605191	MsaT020230.1:CDS
TTTCTCATGAGCTTGAAAGC+CGG	0.550380	4:+47604053	MsaT020230.1:CDS
TTTCACCAGAAGTACTATTG+TGG	0.550801	4:+47599480	MsaT020230.1:CDS
GAGTGGTGTAGAGAGAGCGC+TGG	0.552036	4:+47598705	MsaT020230.1:CDS
AAAGTCCTTCCTGTGATCAA+AGG	0.552249	4:+47599204	MsaT020230.1:CDS
TAGTACTAAAATAGAGGCAT+TGG	0.554008	4:+47603392	MsaT020230.1:CDS
CTTGCTGATGAAATGGGTAT+GGG	0.555958	4:+47599084	MsaT020230.1:CDS
TCTACTTGCAGGTTTCATTG+AGG	0.557580	4:+47601262	MsaT020230.1:intron
AAAGCATGTGATGCCTCCTA+AGG	0.558209	4:+47599410	MsaT020230.1:CDS
TTTATCATGGGCCAAAGAGA+TGG	0.558538	4:+47599316	MsaT020230.1:CDS
CAAGACAGAATTCACCGGAT+AGG	0.559118	4:+47605172	MsaT020230.1:CDS
CTTGCAGGTTTCATTGAGGA+GGG	0.559645	4:+47601266	MsaT020230.1:intron
ACAGGGCTCTATCAAGAAGA+AGG	0.560597	4:+47599590	MsaT020230.1:CDS
CAAATTCAGAGCAACACCTC+CGG	0.562223	4:-47604072	None:intergenic
CCATACCCATTTCATCAGCA+AGG	0.563228	4:-47599083	None:intergenic
AGGGTCTTGATTCAAGTCAA+AGG	0.563864	4:-47598548	None:intergenic
TGCTGAGGTACCAAAGGGAA+TGG	0.566820	4:+47599013	MsaT020230.1:CDS
GGTCAGAGTTCAAAGTTGGA+TGG	0.567173	4:+47599558	MsaT020230.1:CDS
AGAAGGAACTGGTATTTGAA+GGG	0.570503	4:+47605396	MsaT020230.1:CDS
ACTTGCAGGTTTCATTGAGG+AGG	0.570846	4:+47601265	MsaT020230.1:intron
GACTGTAGGCGGTTCTTCAG+AGG	0.573272	4:+47605509	MsaT020230.1:CDS
AATGCAGCTGAAGACATTGG+TGG	0.574476	4:+47598517	MsaT020230.1:intron
ATGAATTAGCGGCTGATAAG+GGG	0.576169	4:+47598059	MsaT020230.1:intron
TTTAATGCAGCTGAAGACAT+TGG	0.576240	4:+47598514	MsaT020230.1:intron
AATCACTGATGATTATAGTA+GGG	0.576661	4:-47598567	None:intergenic
CATTTCTCCATGCTGTGAAG+TGG	0.576787	4:+47599640	MsaT020230.1:CDS
TGCAATCACAGTCCTTGCAC+AGG	0.578969	4:-47600359	None:intergenic
CATCCGGATATGGTGATGAT+GGG	0.579589	4:+47601062	MsaT020230.1:CDS
CTCATGAGCTTGAAAGCCGG+AGG	0.580044	4:+47604056	MsaT020230.1:CDS
GTTGCAATTCCCGTTTAGCA+AGG	0.580293	4:-47599134	None:intergenic
GCAAAGGATCATATTGGATG+AGG	0.582737	4:+47599662	MsaT020230.1:CDS
TCCCTTTGGTACCTCAGCAA+CGG	0.584221	4:-47599009	None:intergenic
GAGCATTCTGTAACTAGAGG+TGG	0.586266	4:+47599057	MsaT020230.1:CDS
AGTGAGTAATTTAGAGCATG+AGG	0.586524	4:-47603262	None:intergenic
GCTCTCCAACACGATTCTGA+AGG	0.586678	4:-47600131	None:intergenic
CAAGCATGCCATAACAACAC+TGG	0.586806	4:-47598877	None:intergenic
GACTTCCAACAAGGATGCCG+TGG	0.587500	4:+47603293	MsaT020230.1:CDS
GTTACCAGAATCGATTTCAT+CGG	0.588810	4:-47597031	None:intergenic
CCCTCCTTTAATAGGACTGT+AGG	0.590156	4:+47605495	MsaT020230.1:intron
AGGAAGGACTTTAGACGACC+CGG	0.591024	4:-47599193	None:intergenic
AACTCTTGTCATCTGTCCCG+TGG	0.591790	4:+47599227	MsaT020230.1:CDS
GAAGTGGCAAAGGATCATAT+TGG	0.591835	4:+47599656	MsaT020230.1:CDS
GGGGCAAGATACTTGTCCTA+AGG	0.593851	4:-47603241	None:intergenic
CCAAAGGGAATGGTTAGCAT+GGG	0.594360	4:+47599023	MsaT020230.1:CDS
GGTGGGAACTTGGCTAGTAA+TGG	0.597355	4:+47602986	MsaT020230.1:CDS
AAATCTGATTCTGATTATGA+AGG	0.599158	4:+47598154	MsaT020230.1:CDS
TCCTTGGTGGAACCCTGCAG+TGG	0.601537	4:+47605138	MsaT020230.1:CDS
AAAATGCCTAACAGAACTGT+GGG	0.602819	4:-47600880	None:intergenic
AAGACACGGTCCAGAAAGAG+AGG	0.603186	4:+47598652	MsaT020230.1:CDS
TGTTGATTTGACTTCCAACA+AGG	0.605045	4:+47603284	MsaT020230.1:CDS
GGAAACATGAACATGAGAAG+TGG	0.605491	4:+47598899	MsaT020230.1:CDS
TTGAACACTCAGATTCGCCC+GGG	0.607769	4:+47599175	MsaT020230.1:CDS
AGAAGTATTATCTTCTCCAT+CGG	0.609495	4:-47598590	None:intergenic
CCATTGAGTGACAGCAACCA+CGG	0.609926	4:-47599244	None:intergenic
TCATCACTTCACTCTGATCG+AGG	0.610619	4:-47598951	None:intergenic
CATTGAGTGACAGCAACCAC+GGG	0.611625	4:-47599243	None:intergenic
AAGTAAATTTACCTTCTGCA+GGG	0.612205	4:-47603872	None:intergenic
TGAAAGGGATGGTTCTGCAA+AGG	0.613745	4:+47603801	MsaT020230.1:CDS
CTGCAGCAGCACTAAAAGGT+GGG	0.619966	4:+47602969	MsaT020230.1:CDS
ACACCCCTTCAGAATCGTGT+TGG	0.620062	4:+47600126	MsaT020230.1:CDS
GTGAGTAATTTAGAGCATGA+GGG	0.622262	4:-47603261	None:intergenic
CATCAACTACTCCCTGCAGA+AGG	0.623237	4:+47603861	MsaT020230.1:CDS
ACTGCAGCAGCACTAAAAGG+TGG	0.623895	4:+47602968	MsaT020230.1:CDS
ATTCCCGTTTAGCAAGGACA+AGG	0.625183	4:-47599128	None:intergenic
TGATAAGGGGAAGCAGCCGA+TGG	0.627163	4:+47598072	MsaT020230.1:CDS
CATCACTTCACTCTGATCGA+GGG	0.628521	4:-47598950	None:intergenic
AAGGCGAACTAAAATAGGCA+GGG	0.631256	4:+47601135	MsaT020230.1:CDS
CAGGAGCATTCTGTAACTAG+AGG	0.632955	4:+47599054	MsaT020230.1:CDS
TGAGTAATTTAGAGCATGAG+GGG	0.636418	4:-47603260	None:intergenic
TCCTTTAATAGGACTGTAGG+CGG	0.636419	4:+47605498	MsaT020230.1:intron
ATAATCATCAGTGATTCCGA+TGG	0.636436	4:+47598574	MsaT020230.1:CDS
AACAAAGAGAAATTTCAAGT+CGG	0.640962	4:-47605553	None:intergenic
AGGCTCAAGACAGAATTCAC+CGG	0.644344	4:+47605167	MsaT020230.1:CDS
TGATACTGTTGAAGATCCAG+TGG	0.645228	4:+47603039	MsaT020230.1:CDS
TGTCATTGAAAACACAATCG+AGG	0.649039	4:+47605349	MsaT020230.1:CDS
TAAGGGGAAGCAGCCGATGG+AGG	0.649205	4:+47598075	MsaT020230.1:CDS
TTGCTGATGAAATGGGTATG+GGG	0.649672	4:+47599085	MsaT020230.1:CDS
CTATTCCTATAACCTGTGCA+AGG	0.650791	4:+47600347	MsaT020230.1:CDS
TTGAAAACACAATCGAGGAG+AGG	0.651748	4:+47605354	MsaT020230.1:CDS
TCACCTGACGTAGTCGTGTG+AGG	0.653741	4:-47602239	None:intergenic
GCGCTCTCTCTACACCACTC+AGG	0.656151	4:-47598702	None:intergenic
GCGCTCTCTCTACACCACTC+AGG	0.656940	4:-47598735	None:intergenic
AATAACAACATATTCTACTG+TGG	0.657369	4:+47599374	MsaT020230.1:CDS
GAGTTCCTTTGATCACAGGA+AGG	0.662792	4:-47599209	None:intergenic
TCTCCAACACGATTCTGAAG+GGG	0.662928	4:-47600129	None:intergenic
TCCACTGCAGGGTTCCACCA+AGG	0.664792	4:-47605139	None:intergenic
GGAAGGACTTTAGACGACCC+GGG	0.666354	4:-47599192	None:intergenic
CATCTAAACGGAGAAAGACA+CGG	0.667229	4:+47598638	MsaT020230.1:CDS
TTGGATGGAGAGTTGGAACA+GGG	0.673218	4:+47599573	MsaT020230.1:CDS
GCGCTGGAGTTCGACCTGAG+TGG	0.680598	4:+47598721	MsaT020230.1:CDS
TACTTTGAAAGGAAGCACGA+AGG	0.682106	4:+47599287	MsaT020230.1:CDS
GGTGATGTTGAACAAGAATG+TGG	0.687600	4:+47603007	MsaT020230.1:CDS
TTCCCGTTTAGCAAGGACAA+GGG	0.690886	4:-47599127	None:intergenic
TCCGGATGACTGAATTGGTG+TGG	0.691538	4:-47601047	None:intergenic
CCTGACGTAGTCGTGTGAGG+AGG	0.691578	4:-47602236	None:intergenic
AGTGATGAATGAGACGGCTG+AGG	0.695528	4:+47598966	MsaT020230.1:CDS
GGCTCTAGGGAAGTTGACAG+TGG	0.705367	4:+47605530	MsaT020230.1:CDS
GGTCTTGATTCAAGTCAAAG+GGG	0.711736	4:-47598546	None:intergenic
CAACAACTCACGATCCTAGG+CGG	0.713689	4:-47601175	None:intergenic
GAGTGAAGTGATGAATGAGA+CGG	0.720096	4:+47598960	MsaT020230.1:CDS
ATAGAATCTACAGACCTGAG+TGG	0.729278	4:+47598688	MsaT020230.1:CDS
GGTTCCACCAAGGATCCATG+AGG	0.748488	4:-47605129	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	47597000	47605581	47597000	ID=MsaG020230
Chr4	mRNA	47597000	47605581	47597000	ID=MsaT020230.1;Parent=MsaG020230
Chr4	exon	47597000	47597048	47597000	ID=MsaT020230.1.exon1;Parent=MsaT020230.1
Chr4	CDS	47597000	47597048	47597000	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47598068	47598175	47598068	ID=MsaT020230.1.exon2;Parent=MsaT020230.1
Chr4	CDS	47598068	47598175	47598068	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47598524	47599683	47598524	ID=MsaT020230.1.exon3;Parent=MsaT020230.1
Chr4	CDS	47598524	47599683	47598524	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47600042	47600164	47600042	ID=MsaT020230.1.exon4;Parent=MsaT020230.1
Chr4	CDS	47600042	47600164	47600042	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47600324	47600397	47600324	ID=MsaT020230.1.exon5;Parent=MsaT020230.1
Chr4	CDS	47600324	47600397	47600324	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47600854	47600917	47600854	ID=MsaT020230.1.exon6;Parent=MsaT020230.1
Chr4	CDS	47600854	47600917	47600854	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47601040	47601186	47601040	ID=MsaT020230.1.exon7;Parent=MsaT020230.1
Chr4	CDS	47601040	47601186	47601040	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47601273	47601358	47601273	ID=MsaT020230.1.exon8;Parent=MsaT020230.1
Chr4	CDS	47601273	47601358	47601273	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47602188	47602257	47602188	ID=MsaT020230.1.exon9;Parent=MsaT020230.1
Chr4	CDS	47602188	47602257	47602188	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47602932	47603060	47602932	ID=MsaT020230.1.exon10;Parent=MsaT020230.1
Chr4	CDS	47602932	47603060	47602932	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47603186	47603413	47603186	ID=MsaT020230.1.exon11;Parent=MsaT020230.1
Chr4	CDS	47603186	47603413	47603186	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47603778	47603882	47603778	ID=MsaT020230.1.exon12;Parent=MsaT020230.1
Chr4	CDS	47603778	47603882	47603778	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47603957	47604109	47603957	ID=MsaT020230.1.exon13;Parent=MsaT020230.1
Chr4	CDS	47603957	47604109	47603957	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47605124	47605212	47605124	ID=MsaT020230.1.exon14;Parent=MsaT020230.1
Chr4	CDS	47605124	47605212	47605124	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47605337	47605417	47605337	ID=MsaT020230.1.exon15;Parent=MsaT020230.1
Chr4	CDS	47605337	47605417	47605337	ID=cds.MsaT020230.1;Parent=MsaT020230.1
Chr4	exon	47605509	47605581	47605509	ID=MsaT020230.1.exon16;Parent=MsaT020230.1
Chr4	CDS	47605509	47605581	47605509	ID=cds.MsaT020230.1;Parent=MsaT020230.1

Gene Sequence

>MsaT020230.1

ATGGAACTTCGTTCTCGTCGACAACGCGCTTCCGATGAAATCGATTCTGCGGCTGATAAGGGGAAGCAGCCGATGGAGGATATTGATGAAAAGTTTGACTTTAATACAGATGAAGATGATCATGTCGCGTCTGTGAAATCTGATTCTGATTATGAAGCTGAAGACATTGGTGGACAGTTCCCCTTTGACTTGAATCAAGACCCTACTATAATCATCAGTGATTCCGATGGAGAAGATAATACTTCTGATTCATCTGACTTTAGCGGGCCTTCATCTAAACGGAGAAAGACACGGTCCAGAAAGAGAGGTAGTAAATCCAAGATAGAATCTACAGACCTGAGTGGTGTAGAGAGAGCGCTGGAGTTCGACCTGAGTGGTGTAGAGAGAGCGCTGCTGGAGTTTGACGATGAGTTATTTCCAATGGTTGCTGAAGAGGCTCCATTTGATTTACCTTTACCTAAGCTGCCAAGGAAGAAAAAAGCAAAGAAGACAAAAAAGGGAGATCCTAAACCAGTGTTGTTATGGCATGCTTGGAAACATGAACATGAGAAGTGGATCGATCAGAATTTGTTGGAAGATGTTACCCTCGATCAGAGTGAAGTGATGAATGAGACGGCTGAGGCATCGTCAGATCTGATTGTTCCGTTGCTGAGGTACCAAAGGGAATGGTTAGCATGGGCTTTGAAGCAGGAGCATTCTGTAACTAGAGGTGGAATCCTTGCTGATGAAATGGGTATGGGGAAAACTATTCAAGCAATTGCCCTTGTCCTTGCTAAACGGGAATTGCAACAAATGAGCTGTGAACCATTTGAACACTCAGATTCGCCCGGGTCGTCTAAAGTCCTTCCTGTGATCAAAGGAACTCTTGTCATCTGTCCCGTGGTTGCTGTCACTCAATGGGTTAGTGAGATTGCTCGATTTACTTTGAAAGGAAGCACGAAGGTTCTGGTTTATCATGGGCCAAAGAGATGGAAGAGTGCTGACAAGTTCTCAGAATATGATTTTGTAATAACAACATATTCTACTGTGGAATCGGAGTACAGAAAGCATGTGATGCCTCCTAAGGAAAAGTGCCAATATTGTGGAAGATTATTTCACCCACCTAGTTTAGTTTTTCACCAGAAGTACTATTGTGGGCCTGACGCTATTAGAACAACAAAACAAGCAAAGCAAACCAAGAAAAAGAAAAGAGGTCAGAGTTCAAAGTTGGATGGAGAGTTGGAACAGGGCTCTATCAAGAAGAAGGAAGAGGATTTAGAAGGCAATGACAAGTCATTTCTCCATGCTGTGAAGTGGCAAAGGATCATATTGGATGAGGCACACTTTATAAAATCTAGGCATTCTAACACTGCAAAAGCAGTTCTTGCCTTAGATTCTTTCTACAAATGGGCATTAAGTGGCACACCCCTTCAGAATCGTGTTGGAGAGCTATATTCTTTGGTACGATTTCTGCAGATAGTTCCCTATTCCTATAACCTGTGCAAGGACTGTGATTGCAGGACACTTGATCATAGCTCCTCTAAAGTATGTTCAAACTGCTCCCACAGTTCTGTTAGGCATTTTTGTTGGTGGAACAAGAATATTGCCACACCAATTCAGTCATCCGGATATGGTGATGATGGGAAAAGAGCTATGATTTTGCTCAAAAACAAACTTTTAAAGAGCATAGTCTTAAGGCGAACTAAAATAGGCAGGGCTGCTGATCTTGCACTTCCGCCTAGGATCGTTTCATTGAGGAGGGATAGCCTGGATATAAAAGAGCAAGACTATTATGAATCACTATACAATGAAAGTCAGGCACAATTTAATACGTATGTCGAGGAAAATACTCTGACAAATAATTATGCTCATATTTTTGACCTCCTCACACGACTACGTCAGGCTGTGGATCATCCATATCTTGTAGTGTATTCTCCAACTGCAGCAGCACTAAAAGGTGGGAACTTGGCTAGTAATGGTGATGTTGAACAAGAATGTGGCATTTGTCATGATACTGTTGAAGATCCAGTGGTTACTTCTTGCGAGCATACTTTTTGCAAGGGATGCTTGATAGATTTTTCTGCTTCCTTAGGACAAGTATCTTGCCCCTCATGCTCTAAATTACTCACTGTTGATTTGACTTCCAACAAGGATGCCGTGGTTGATAAAACAACAACAATTAAGGGTTTCAGATCTTCAAGCATTTTAAACAGGATTCAGATTGAGAATTTTCAGACTAGTACTAAAATAGAGGCATTGAGAGAAGAAATTAGATTTATGGTTGAAAGGGATGGTTCTGCAAAGGCGATTGTTTTTAGCCAGTTCACATCATTCTTGGATCTCATCAACTACTCCCTGCAGAAGTCAGGTGTATCTTGCGTTCAATTGGTTGGAAGTATGACATTAACTGCTCGGGATAATGCCATTAAGAAATTTACTGATGATCCAGATTGCAAAATTTTTCTCATGAGCTTGAAAGCCGGAGGTGTTGCTCTGAATTTGACTGTAGCATCTCATGTTTTCCTCATGGATCCTTGGTGGAACCCTGCAGTGGAGCGTCAGGCTCAAGACAGAATTCACCGGATAGGGCAGTACAAACCAATCAGAATTGTGAGATTTGTCATTGAAAACACAATCGAGGAGAGGATCTTGAAACTTCAAGAGAAGAAGGAACTGGTATTTGAAGGGACTGTAGGCGGTTCTTCAGAGGCTCTAGGGAAGTTGACAGTGGCCGACTTGAAATTTCTCTTTGTTACTTAA

Protein sequence

>MsaT020230.1

MELRSRRQRASDEIDSAADKGKQPMEDIDEKFDFNTDEDDHVASVKSDSDYEAEDIGGQFPFDLNQDPTIIISDSDGEDNTSDSSDFSGPSSKRRKTRSRKRGSKSKIESTDLSGVERALEFDLSGVERALLEFDDELFPMVAEEAPFDLPLPKLPRKKKAKKTKKGDPKPVLLWHAWKHEHEKWIDQNLLEDVTLDQSEVMNETAEASSDLIVPLLRYQREWLAWALKQEHSVTRGGILADEMGMGKTIQAIALVLAKRELQQMSCEPFEHSDSPGSSKVLPVIKGTLVICPVVAVTQWVSEIARFTLKGSTKVLVYHGPKRWKSADKFSEYDFVITTYSTVESEYRKHVMPPKEKCQYCGRLFHPPSLVFHQKYYCGPDAIRTTKQAKQTKKKKRGQSSKLDGELEQGSIKKKEEDLEGNDKSFLHAVKWQRIILDEAHFIKSRHSNTAKAVLALDSFYKWALSGTPLQNRVGELYSLVRFLQIVPYSYNLCKDCDCRTLDHSSSKVCSNCSHSSVRHFCWWNKNIATPIQSSGYGDDGKRAMILLKNKLLKSIVLRRTKIGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQFNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYLVVYSPTAAALKGGNLASNGDVEQECGICHDTVEDPVVTSCEHTFCKGCLIDFSASLGQVSCPSCSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILNRIQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLVGSMTLTARDNAIKKFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTVADLKFLFVT*