AlfalfaGEDB | MsaG020240

M. sativa ssp. caerulea / MsaG020240

KEGG: -
GO: GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010033 GO:0010036 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042493 GO:0042594 GO:0044212 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071496 GO:0080029 GO:0080090 GO:0080169 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020240	XP_024636300.1	64.775	599	89	10	1	509	1	567	0.0	637

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020240	sp\|Q9XEC3\|WRK42_ARATH	37.602	492	232	14	52	486	30	503	1.08e-73	246

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020240	tr\|A0A396I6D6\|A0A396I6D6_MEDTR	64.775	599	89	10	1	509	1	567	0.0	637

TFs/TRs:

Gene ID	Type	Classification
MsaG020240	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000135	MsaG020240	0.838372	5.500687e-57	2.040697e-54
MsaG000325	MsaG020240	0.822443	4.163214e-53	9.770161e-51
MsaG000459	MsaG020240	0.865144	1.460467e-64	1.387820e-61
MsaG000638	MsaG020240	0.806870	1.131587e-49	1.792505e-47
MsaG000613	MsaG020240	0.838714	4.491147e-57	1.684146e-54
MsaG000805	MsaG020240	0.831794	2.463539e-55	7.508979e-53
MsaG000905	MsaG020240	0.816179	1.096408e-51	2.183766e-49
MsaG001026	MsaG020240	0.832695	1.477733e-55	4.623201e-53
MsaG001551	MsaG020240	0.850274	3.595959e-60	1.967097e-57
MsaG001730	MsaG020240	0.800129	2.784171e-48	3.775215e-46
MsaG001939	MsaG020240	0.819745	1.730103e-52	3.779233e-50
MsaG002043	MsaG020240	0.876756	2.258826e-68	3.513385e-65
MsaG002379	MsaG020240	0.843999	1.853497e-58	8.217496e-56
MsaG002481	MsaG020240	0.819415	2.055767e-52	4.452122e-50
MsaG002489	MsaG020240	0.867889	1.979656e-65	2.102163e-62
MsaG002603	MsaG020240	0.884664	3.398561e-71	7.655794e-68
MsaG003422	MsaG020240	0.848079	1.456918e-59	7.397998e-57
MsaG003470	MsaG020240	0.857264	3.576575e-62	2.509299e-59
MsaG003665	MsaG020240	0.883567	8.612979e-71	1.840790e-67
MsaG003715	MsaG020240	0.802381	9.680099e-49	1.381405e-46
MsaG003831	MsaG020240	0.855402	1.250432e-61	8.196851e-59
MsaG003861	MsaG020240	0.874546	1.283260e-67	1.809241e-64
MsaG003894	MsaG020240	0.804595	3.382127e-49	5.079396e-47
MsaG004107	MsaG020240	0.853759	3.719564e-61	2.298908e-58
MsaG004112	MsaG020240	0.858780	1.274413e-62	9.460940e-60
MsaG004184	MsaG020240	0.880443	1.155373e-69	2.129031e-66
MsaG004280	MsaG020240	0.833449	9.613410e-56	3.075098e-53
MsaG004452	MsaG020240	0.881328	5.581252e-70	1.071635e-66
MsaG004570	MsaG020240	0.848961	8.327392e-60	4.356085e-57
MsaG004718	MsaG020240	0.815344	1.679306e-51	3.274666e-49
MsaG004819	MsaG020240	0.851304	1.850157e-60	1.048882e-57
MsaG004887	MsaG020240	0.815302	1.715655e-51	3.341991e-49
MsaG004924	MsaG020240	0.839828	2.315884e-57	8.992240e-55
MsaG005073	MsaG020240	0.804029	4.429827e-49	6.566700e-47
MsaG005060	MsaG020240	0.873691	2.490310e-67	3.381689e-64
MsaG005062	MsaG020240	0.870832	2.208664e-66	2.651150e-63
MsaG005100	MsaG020240	0.842976	3.466492e-58	1.487379e-55
MsaG005336	MsaG020240	0.859122	1.008075e-62	7.580339e-60
MsaG005568	MsaG020240	0.814397	2.716793e-51	5.172828e-49
MsaG005603	MsaG020240	0.822339	4.400538e-53	1.029856e-50
MsaG005722	MsaG020240	0.814284	2.877703e-51	5.463540e-49
MsaG005837	MsaG020240	0.809291	3.472700e-50	5.829409e-48
MsaG005869	MsaG020240	0.823638	2.198651e-53	5.329554e-51
MsaG006245	MsaG020240	0.809720	2.811592e-50	4.769000e-48
MsaG006270	MsaG020240	0.832461	1.687919e-55	5.245155e-53
MsaG006324	MsaG020240	0.809892	2.582623e-50	4.398954e-48
MsaG006471	MsaG020240	0.904650	2.312393e-79	1.559849e-75
MsaG006657	MsaG020240	0.804258	3.971522e-49	5.918531e-47
MsaG006680	MsaG020240	0.816824	7.873832e-52	1.594383e-49
MsaG006765	MsaG020240	0.806465	1.376248e-49	2.159520e-47
MsaG006809	MsaG020240	0.814659	2.379662e-51	4.560547e-49
MsaG006827	MsaG020240	0.837081	1.175395e-56	4.191354e-54
MsaG007036	MsaG020240	0.879811	1.936763e-69	3.465344e-66
MsaG007091	MsaG020240	0.900441	1.682702e-77	8.836308e-74
MsaG007416	MsaG020240	0.869194	7.532231e-66	8.438962e-63
MsaG007534	MsaG020240	0.824182	1.641346e-53	4.037550e-51
MsaG007840	MsaG020240	0.813994	3.332273e-51	6.280674e-49
MsaG007982	MsaG020240	0.803633	5.349201e-49	7.856570e-47
MsaG008511	MsaG020240	0.863449	4.908349e-64	4.360251e-61
MsaG008619	MsaG020240	0.820740	1.025636e-52	2.300282e-50
MsaG008643	MsaG020240	0.828050	1.993664e-54	5.459612e-52
MsaG009289	MsaG020240	0.801508	1.460024e-48	2.042453e-46
MsaG009326	MsaG020240	0.814662	2.376107e-51	4.554134e-49
MsaG010177	MsaG020240	0.804525	3.497393e-49	5.244092e-47
MsaG010598	MsaG020240	0.807596	7.953804e-50	1.281819e-47
MsaG010706	MsaG020240	0.838429	5.317774e-57	1.976396e-54
MsaG011484	MsaG020240	0.882198	2.712023e-70	5.425544e-67
MsaG011704	MsaG020240	0.820434	1.204960e-52	2.680881e-50
MsaG011887	MsaG020240	0.854679	2.023418e-61	1.292300e-58
MsaG012046	MsaG020240	0.827441	2.787156e-54	7.503249e-52
MsaG012224	MsaG020240	0.866171	6.947755e-65	6.879519e-62
MsaG012294	MsaG020240	0.862996	6.767563e-64	5.906048e-61
MsaG012723	MsaG020240	0.850226	3.707990e-60	2.025022e-57
MsaG013839	MsaG020240	0.809812	2.687034e-50	4.567953e-48
MsaG014815	MsaG020240	0.884930	2.709761e-71	6.184669e-68
MsaG014848	MsaG020240	0.847681	1.873208e-59	9.385135e-57
MsaG015018	MsaG020240	0.812624	6.639004e-51	1.209161e-48
MsaG015493	MsaG020240	0.823804	2.010563e-53	4.895614e-51
MsaG015871	MsaG020240	0.839893	2.228609e-57	8.671107e-55
MsaG016209	MsaG020240	0.842997	3.422585e-58	1.469540e-55
MsaG016215	MsaG020240	0.813296	4.738407e-51	8.775605e-49
MsaG016327	MsaG020240	0.857279	3.539969e-62	2.485186e-59
MsaG016419	MsaG020240	0.856448	6.206306e-62	4.226490e-59
MsaG016471	MsaG020240	0.839913	2.201623e-57	8.571703e-55
MsaG016663	MsaG020240	0.831651	2.669854e-55	8.103872e-53
MsaG016678	MsaG020240	0.815494	1.555420e-51	3.044549e-49
MsaG016695	MsaG020240	0.893357	1.511648e-74	5.325392e-71
MsaG016772	MsaG020240	0.805050	2.719761e-49	4.128223e-47
MsaG016884	MsaG020240	0.865894	8.496031e-65	8.318572e-62
MsaG017009	MsaG020240	0.838944	3.920527e-57	1.480790e-54
MsaG017051	MsaG020240	0.879695	2.128610e-69	3.788001e-66
MsaG017310	MsaG020240	0.812731	6.294394e-51	1.149427e-48
MsaG017183	MsaG020240	0.809147	3.725966e-50	6.233370e-48
MsaG017495	MsaG020240	0.805268	2.449685e-49	3.736990e-47
MsaG017644	MsaG020240	0.846128	4.960955e-59	2.359653e-56
MsaG017699	MsaG020240	0.818539	3.244493e-52	6.866965e-50
MsaG017703	MsaG020240	0.817065	6.955360e-52	1.417230e-49
MsaG017827	MsaG020240	0.868157	1.624114e-65	1.743672e-62
MsaG017828	MsaG020240	0.856022	8.260435e-62	5.537829e-59
MsaG017954	MsaG020240	0.864481	2.351445e-64	2.176000e-61
MsaG017983	MsaG020240	0.865481	1.145357e-64	1.103085e-61
MsaG018035	MsaG020240	0.859951	5.691122e-63	4.416589e-60
MsaG018054	MsaG020240	0.902431	2.270967e-78	1.340994e-74
MsaG018286	MsaG020240	0.844305	1.535909e-58	6.878671e-56
MsaG018598	MsaG020240	0.801569	1.418901e-48	1.987668e-46
MsaG018641	MsaG020240	0.851042	2.192242e-60	1.231600e-57
MsaG019120	MsaG020240	0.830542	4.983467e-55	1.464709e-52
MsaG019160	MsaG020240	0.837005	1.229048e-56	4.372381e-54
MsaG019183	MsaG020240	0.839547	2.739196e-57	1.054171e-54
MsaG019213	MsaG020240	0.820770	1.009588e-52	2.266077e-50
MsaG019237	MsaG020240	0.803550	5.564156e-49	8.156992e-47
MsaG019466	MsaG020240	0.855088	1.541620e-61	9.990764e-59
MsaG019527	MsaG020240	0.813046	5.372407e-51	9.888451e-49
MsaG019559	MsaG020240	0.870150	3.688462e-66	4.301460e-63
MsaG019649	MsaG020240	0.806977	1.074043e-49	1.705666e-47
MsaG019672	MsaG020240	0.810210	2.207268e-50	3.788671e-48
MsaG019720	MsaG020240	0.885993	1.088213e-71	2.617436e-68
MsaG019890	MsaG020240	0.801853	1.241408e-48	1.750339e-46
MsaG019907	MsaG020240	0.877332	1.429256e-68	2.281541e-65
MsaG020021	MsaG020240	0.815362	1.664403e-51	3.247052e-49
MsaG020189	MsaG020240	0.802337	9.882174e-49	1.408843e-46
MsaG020240	MsaG020382	0.854693	2.005048e-61	1.281208e-58
MsaG020240	MsaG020550	0.836481	1.668882e-56	5.844304e-54
MsaG020240	MsaG020591	0.838083	6.521299e-57	2.397895e-54
MsaG020240	MsaG020834	0.830456	5.229622e-55	1.533287e-52
MsaG020240	MsaG020992	0.864514	2.295870e-64	2.127380e-61
MsaG020240	MsaG021200	0.807995	6.548125e-50	1.065509e-47
MsaG020240	MsaG021222	0.878209	7.084111e-69	1.177291e-65
MsaG020240	MsaG022927	0.831623	2.712125e-55	8.225282e-53
MsaG020240	MsaG023188	0.831409	3.060522e-55	9.223512e-53
MsaG020240	MsaG023298	0.829205	1.051395e-54	2.974067e-52
MsaG020240	MsaG023376	0.835443	3.050852e-56	1.035595e-53
MsaG020240	MsaG023648	0.807476	8.430750e-50	1.354831e-47
MsaG020240	MsaG023649	0.852065	1.128783e-60	6.572387e-58
MsaG020240	MsaG023705	0.816238	1.063454e-51	2.121362e-49
MsaG020240	MsaG023711	0.829410	9.380696e-55	2.669302e-52
MsaG020240	MsaG023716	0.839023	3.741150e-57	1.416501e-54
MsaG020240	MsaG023793	0.809449	3.212856e-50	5.414329e-48
MsaG020240	MsaG023794	0.847981	1.550425e-59	7.846939e-57
MsaG020240	MsaG023796	0.809957	2.501699e-50	4.267716e-48
MsaG020240	MsaG023834	0.815084	1.917088e-51	3.713678e-49
MsaG020240	MsaG023861	0.806889	1.121068e-49	1.776644e-47
MsaG020240	MsaG024134	0.900851	1.117641e-77	6.012937e-74
MsaG020240	MsaG024115	0.804339	3.821197e-49	5.705137e-47
MsaG020240	MsaG024295	0.854642	2.074769e-61	1.323311e-58
MsaG020240	MsaG024282	0.828676	1.409968e-54	3.929533e-52
MsaG020240	MsaG024480	0.898884	7.833117e-77	3.754132e-73
MsaG020240	MsaG024570	0.819839	1.646975e-52	3.606686e-50
MsaG020240	MsaG024571	0.807977	6.605595e-50	1.074391e-47
MsaG020240	MsaG025143	0.820599	1.104902e-52	2.468816e-50
MsaG020240	MsaG025153	0.807589	7.981626e-50	1.286094e-47
MsaG020240	MsaG025368	0.849581	5.605234e-60	2.995227e-57
MsaG020240	MsaG025641	0.866253	6.550089e-65	6.506821e-62
MsaG020240	MsaG025910	0.837235	1.074090e-56	3.847952e-54
MsaG020240	MsaG026480	0.865136	1.468581e-64	1.395086e-61
MsaG020240	MsaG026585	0.811989	9.123746e-51	1.635763e-48
MsaG020240	MsaG026692	0.824960	1.078654e-53	2.710388e-51
MsaG020240	MsaG026697	0.839061	3.656948e-57	1.386312e-54
MsaG020240	MsaG026829	0.840324	1.721958e-57	6.790895e-55
MsaG020240	MsaG026961	0.883255	1.119383e-70	2.356302e-67
MsaG020240	MsaG027198	0.828937	1.220036e-54	3.425097e-52
MsaG020240	MsaG027207	0.851727	1.406427e-60	8.091461e-58
MsaG020240	MsaG027210	0.840180	1.877601e-57	7.370996e-55
MsaG020240	MsaG027241	0.823029	3.046021e-53	7.262529e-51
MsaG020240	MsaG027291	0.804122	4.238736e-49	6.296753e-47
MsaG020240	MsaG027557	0.828372	1.668884e-54	4.611919e-52
MsaG020240	MsaG027572	0.876483	2.805201e-68	4.309658e-65
MsaG020240	MsaG027715	0.888307	1.447123e-72	3.908046e-69
MsaG020240	MsaG027738	0.852756	7.187472e-61	4.287387e-58
MsaG020240	MsaG027828	0.876775	2.225809e-68	3.464877e-65
MsaG020240	MsaG028193	0.803118	6.831513e-49	9.915215e-47
MsaG020240	MsaG028277	0.814271	2.895668e-51	5.495918e-49
MsaG020240	MsaG028420	0.831713	2.578524e-55	7.840904e-53
MsaG020240	MsaG028661	0.844449	1.405440e-58	6.324158e-56
MsaG020240	MsaG028844	0.822029	5.187206e-53	1.203892e-50
MsaG020240	MsaG028934	0.831258	3.332375e-55	9.998197e-53
MsaG020240	MsaG029048	0.851235	1.934449e-60	1.094037e-57
MsaG020240	MsaG029053	0.851690	1.440294e-60	8.275713e-58
MsaG020240	MsaG029091	0.896608	7.090204e-76	2.985597e-72
MsaG020240	MsaG029152	0.874035	1.908499e-67	2.631051e-64
MsaG020240	MsaG029213	0.814907	2.098205e-51	4.046452e-49
MsaG020240	MsaG029307	0.877240	1.537426e-68	2.444153e-65
MsaG020240	MsaG029402	0.801710	1.327883e-48	1.866136e-46
MsaG020240	MsaG029422	0.830197	6.048063e-55	1.760254e-52
MsaG020240	MsaG029561	0.882371	2.346426e-70	4.733592e-67
MsaG020240	MsaG029546	0.877260	1.513977e-68	2.408818e-65
MsaG020240	MsaG029618	0.872853	4.744919e-67	6.211271e-64
MsaG020240	MsaG029953	0.855119	1.510400e-61	9.799394e-59
MsaG020240	MsaG029947	0.879757	2.024675e-69	3.613070e-66
MsaG020240	MsaG029928	0.804751	3.138280e-49	4.730451e-47
MsaG020240	MsaG030038	0.818127	4.018217e-52	8.414517e-50
MsaG020240	MsaG030396	0.873498	2.890183e-67	3.890947e-64
MsaG020240	MsaG030902	0.852568	8.131872e-61	4.818374e-58
MsaG020240	MsaG031248	0.821377	7.328098e-53	1.671545e-50
MsaG020240	MsaG032279	0.887534	2.853795e-72	7.413490e-69
MsaG020240	MsaG032297	0.807531	8.208919e-50	1.320923e-47
MsaG020240	MsaG032616	0.813523	4.226937e-51	7.873446e-49
MsaG020240	MsaG032901	0.821892	5.578467e-53	1.289961e-50
MsaG020240	MsaG032915	0.874469	1.361710e-67	1.913410e-64
MsaG020240	MsaG033231	0.882256	2.582914e-70	5.181449e-67
MsaG020240	MsaG033670	0.825670	7.336434e-54	1.879892e-51
MsaG020240	MsaG033721	0.848280	1.283030e-59	6.558321e-57
MsaG020240	MsaG033781	0.882113	2.910081e-70	5.798575e-67
MsaG020240	MsaG033818	0.807242	9.443895e-50	1.509182e-47
MsaG020240	MsaG034217	0.882235	2.629107e-70	5.268818e-67
MsaG020240	MsaG034590	0.877953	8.696371e-69	1.428180e-65
MsaG020240	MsaG034974	0.827673	2.454083e-54	6.649626e-52
MsaG020240	MsaG035156	0.801155	1.723311e-48	2.391546e-46
MsaG020240	MsaG035277	0.817124	6.746900e-52	1.376856e-49
MsaG020240	MsaG035380	0.844946	1.034147e-58	4.731085e-56
MsaG020240	MsaG035657	0.868732	1.062178e-65	1.167529e-62
MsaG020240	MsaG035743	0.818809	2.819552e-52	6.009769e-50
MsaG020240	MsaG036706	0.819959	1.546076e-52	3.396816e-50
MsaG020240	MsaG038749	0.858988	1.104841e-62	8.266606e-60
MsaG020240	MsaG039981	0.830958	3.946277e-55	1.173820e-52
MsaG020240	MsaG040270	0.889947	3.372252e-73	9.909517e-70
MsaG020240	MsaG040577	0.850477	3.154323e-60	1.737847e-57
MsaG020240	MsaG040600	0.808853	4.305171e-50	7.151511e-48
MsaG020240	MsaG040728	0.882739	1.726219e-70	3.544658e-67
MsaG020240	MsaG041014	0.825673	7.327974e-54	1.877861e-51
MsaG020240	MsaG041072	0.819667	1.802199e-52	3.928618e-50
MsaG020240	MsaG041229	0.825298	8.979124e-54	2.277275e-51
MsaG020240	MsaG041299	0.805929	1.782993e-49	2.762302e-47
MsaG020240	MsaG041717	0.863725	4.033615e-64	3.622496e-61
MsaG020240	MsaG041754	0.861260	2.293553e-63	1.870847e-60
MsaG020240	MsaG042624	0.839297	3.177661e-57	1.213404e-54
MsaG020240	MsaG042996	0.878459	5.790752e-69	9.731669e-66
MsaG020240	MsaG043725	0.806315	1.479447e-49	2.313203e-47
MsaG020240	MsaG043788	0.800449	2.397468e-48	3.274603e-46
MsaG020240	MsaG043817	0.857004	4.264922e-62	2.963451e-59
MsaG020240	MsaG043882	0.807874	6.944939e-50	1.126824e-47
MsaG020240	MsaG044117	0.869202	7.489366e-66	8.393428e-63
MsaG020240	MsaG044200	0.867481	2.671001e-65	2.788912e-62
MsaG020240	MsaG044864	0.837869	7.399139e-57	2.702713e-54
MsaG020240	MsaG044916	0.826873	3.806187e-54	1.008527e-51
MsaG020240	MsaG045284	0.887566	2.774779e-72	7.219001e-69
MsaG020240	MsaG045331	0.807443	8.566701e-50	1.375604e-47
MsaG020240	MsaG045387	0.819566	1.899904e-52	4.130686e-50
MsaG020240	MsaG045428	0.844694	1.208195e-58	5.480760e-56
MsaG020240	MsaG045819	0.865955	8.127646e-65	7.977538e-62
MsaG020240	MsaG045969	0.864849	1.805028e-64	1.695182e-61
MsaG020240	MsaG046022	0.833453	9.589462e-56	3.067822e-53
MsaG020240	MsaG046078	0.856400	6.409937e-62	4.357647e-59
MsaG020240	MsaG046123	0.893532	1.285323e-74	4.571422e-71
MsaG020240	MsaG046167	0.872203	7.803335e-67	9.932759e-64
MsaG020240	MsaG046173	0.892261	4.146551e-74	1.377304e-70
MsaG020240	MsaG046206	0.805138	2.607693e-49	3.966136e-47
MsaG020240	MsaG046540	0.833903	7.412822e-56	2.402952e-53
MsaG020240	MsaG046522	0.803028	7.130073e-49	1.032694e-46
MsaG020240	MsaG046501	0.812799	6.081789e-51	1.112512e-48
MsaG020240	MsaG046503	0.884505	3.892355e-71	8.702292e-68
MsaG020240	MsaG046603	0.823734	2.088251e-53	5.075071e-51
MsaG020240	MsaG046660	0.836249	1.910838e-56	6.645087e-54
MsaG020240	MsaG046745	0.877438	1.312933e-68	2.105940e-65
MsaG020240	MsaG046780	0.862460	9.884293e-64	8.445910e-61
MsaG020240	MsaG046960	0.811828	9.887626e-51	1.765723e-48
MsaG020240	MsaG046972	0.803495	5.711902e-49	8.362594e-47
MsaG020240	MsaG046975	0.845291	8.348770e-59	3.862148e-56
MsaG020240	MsaG047077	0.896851	5.617277e-76	2.398307e-72
MsaG020240	MsaG047097	0.897245	3.849401e-76	1.681125e-72
MsaG020240	MsaG002000	0.825435	8.336288e-54	2.122216e-51
MsaG020240	MsaG001807	0.833048	1.208803e-55	3.821154e-53
MsaG020240	MsaG001072	0.861827	1.541554e-63	1.285106e-60
MsaG020240	MsaG002617	0.845407	7.767885e-59	3.607583e-56
MsaG020240	MsaG006148	0.815477	1.568952e-51	3.069714e-49
MsaG020240	MsaG014278	0.826942	3.665966e-54	9.732196e-52
MsaG020240	MsaG013546	0.807609	7.901215e-50	1.273779e-47
MsaG020240	MsaG014164	0.836437	1.712907e-56	5.990689e-54
MsaG020240	MsaG013041	0.806744	1.202339e-49	1.899046e-47
MsaG020240	MsaG011821	0.826580	4.468246e-54	1.174313e-51
MsaG020240	MsaG013496	0.836643	1.518577e-56	5.343840e-54
MsaG020240	MsaG012993	0.849821	4.806362e-60	2.589094e-57
MsaG020240	MsaG022046	0.806586	1.298199e-49	2.042824e-47
MsaG020240	MsaG018912	0.813257	4.832019e-51	8.940497e-49
MsaG020240	MsaG020128	0.880388	1.208610e-69	2.221418e-66
MsaG020240	MsaG019847	0.818130	4.011866e-52	8.401887e-50
MsaG020240	MsaG019816	0.827828	2.253012e-54	6.131675e-52
MsaG020240	MsaG025092	0.805886	1.820052e-49	2.816916e-47
MsaG020240	MsaG027201	0.813385	4.531169e-51	8.410888e-49
MsaG020240	MsaG026803	0.843557	2.430270e-58	1.062410e-55
MsaG020240	MsaG028384	0.805139	2.605765e-49	3.963313e-47
MsaG020240	MsaG028071	0.813846	3.591372e-51	6.744059e-49
MsaG020240	MsaG026407	0.818389	3.506830e-52	7.393558e-50
MsaG020240	MsaG028079	0.904577	2.495637e-79	1.676493e-75
MsaG020240	MsaG033602	0.863116	6.216733e-64	5.450808e-61
MsaG020240	MsaG030561	0.800851	1.986815e-48	2.738392e-46
MsaG020240	MsaG033348	0.821289	7.680249e-53	1.747775e-50
MsaG020240	MsaG031503	0.832330	1.818013e-55	5.627745e-53
MsaG020240	MsaG031246	0.844127	1.713606e-58	7.630375e-56
MsaG020240	MsaG031638	0.822121	4.939453e-53	1.149224e-50
MsaG020240	MsaG033778	0.900010	2.582140e-77	1.321713e-73
MsaG020240	MsaG033259	0.895465	2.103556e-75	8.308222e-72
MsaG020240	MsaG038885	0.804863	2.975294e-49	4.496414e-47
MsaG020240	MsaG036736	0.833570	8.968869e-56	2.879106e-53
MsaG020240	MsaG036286	0.908074	6.084289e-81	5.078343e-77
MsaG020240	MsaG036043	0.874804	1.049446e-67	1.496419e-64
MsaG020240	MsaG039696	0.811232	1.330359e-50	2.341241e-48
MsaG020240	MsaG036661	0.803596	5.444795e-49	7.990114e-47
MsaG020240	MsaG035600	0.815142	1.861293e-51	3.610876e-49
MsaG020240	MsaG036866	0.804549	3.456775e-49	5.186115e-47
MsaG020240	MsaG038591	0.808758	4.510134e-50	7.474965e-48
MsaG020240	MsaG037531	0.846676	3.523348e-59	1.706626e-56
MsaG020240	MsaG037725	0.861636	1.762545e-63	1.458403e-60
MsaG020240	MsaG036685	0.838849	4.147889e-57	1.562040e-54
MsaG020240	MsaG039797	0.845648	6.688823e-59	3.131301e-56
MsaG020240	MsaG035418	0.850612	2.893075e-60	1.601442e-57
MsaG020240	MsaG036758	0.894774	4.032511e-75	1.534461e-71
MsaG020240	MsaG041442	0.893781	1.019820e-74	3.676352e-71
MsaG020240	MsaG044977	0.867785	2.136516e-65	2.259159e-62
MsaG020240	MsaG044531	0.813845	3.592289e-51	6.745677e-49
MsaG020240	MsaG043116	0.846024	5.294119e-59	2.509357e-56
MsaG020240	MsaG043484	0.801902	1.213406e-48	1.712759e-46
MsaG020240	MsaG046854	0.806224	1.546060e-49	2.412155e-47
MsaG020240	MsaG047025	0.815746	1.367719e-51	2.694338e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020240	MtrunA17_Chr4g0025051	64.775	599	89	10	1	509	1	567	0.0	637
MsaG020240	MtrunA17_Chr4g0025061	58.615	621	128	13	9	526	17	611	0.0	599
MsaG020240	MtrunA17_Chr4g0024391	58.065	465	96	7	161	526	24	488	1.49e-154	450
MsaG020240	MtrunA17_Chr2g0322391	38.899	527	188	15	76	524	120	590	2.09e-79	260
MsaG020240	MtrunA17_Chr2g0288871	37.126	501	213	19	52	487	67	530	8.62e-68	228
MsaG020240	MtrunA17_Chr4g0075201	37.687	467	204	14	52	474	41	464	4.12e-63	214
MsaG020240	MtrunA17_Chr3g0099641	46.512	215	96	5	290	486	231	444	7.22e-55	191
MsaG020240	MtrunA17_Chr4g0024401	75.610	123	24	2	1	123	1	117	1.25e-52	174
MsaG020240	MtrunA17_Chr7g0270831	45.217	230	107	7	293	511	199	420	9.32e-46	166
MsaG020240	MtrunA17_Chr2g0302391	47.826	161	72	4	281	429	182	342	5.87e-37	141
MsaG020240	MtrunA17_Chr7g0216891	43.284	134	56	3	264	377	160	293	8.00e-27	114
MsaG020240	MtrunA17_Chr4g0051181	53.465	101	40	1	295	388	228	328	8.95e-25	107
MsaG020240	MtrunA17_Chr4g0060271	55.263	76	27	1	295	363	240	315	1.35e-22	101
MsaG020240	MtrunA17_Chr5g0419241	70.000	50	15	0	288	337	55	104	9.27e-22	90.5
MsaG020240	MtrunA17_Chr4g0001361	29.469	207	107	7	287	486	139	313	7.26e-20	90.5
MsaG020240	MtrunA17_Chr5g0432161	39.200	125	64	4	252	365	359	482	3.58e-16	81.6
MsaG020240	MtrunA17_Chr3g0101131	37.037	108	59	3	283	381	388	495	2.88e-15	78.6
MsaG020240	MtrunA17_Chr2g0333851	43.590	78	35	2	296	364	153	230	3.43e-15	76.6
MsaG020240	MtrunA17_Chr7g0218081	43.478	92	46	2	290	375	390	481	3.90e-15	78.2
MsaG020240	MtrunA17_Chr5g0418191	41.237	97	45	3	280	365	286	381	4.97e-15	77.4
MsaG020240	MtrunA17_Chr7g0249311	39.423	104	55	2	270	365	350	453	1.27e-14	76.6
MsaG020240	MtrunA17_Chr7g0249311	30.286	175	101	7	210	367	71	241	3.26e-11	65.9
MsaG020240	MtrunA17_Chr4g0051881	39.000	100	54	2	297	390	165	263	1.49e-14	75.1
MsaG020240	MtrunA17_Chr3g0106491	39.000	100	55	2	271	364	326	425	1.95e-14	75.9
MsaG020240	MtrunA17_Chr5g0445311	45.570	79	37	2	293	365	347	425	2.60e-14	75.5
MsaG020240	MtrunA17_Chr4g0004911	47.436	78	35	2	292	363	318	395	3.12e-14	75.1
MsaG020240	MtrunA17_Chr3g0079691	44.304	79	38	1	293	365	478	556	3.63e-14	75.5
MsaG020240	MtrunA17_Chr1g0150271	31.783	129	66	5	256	363	34	161	3.71e-14	72.4
MsaG020240	MtrunA17_Chr5g0447701	41.758	91	47	2	281	365	223	313	5.43e-14	73.9
MsaG020240	MtrunA17_Chr2g0294231	41.558	77	39	1	297	367	190	266	6.90e-14	73.6
MsaG020240	MtrunA17_Chr1g0150281	39.130	92	49	1	295	379	125	216	8.02e-14	72.0
MsaG020240	MtrunA17_Chr7g0249301	44.000	75	36	1	297	365	279	353	8.49e-14	73.2
MsaG020240	MtrunA17_Chr7g0270191	39.785	93	46	3	295	381	130	218	9.89e-14	72.0
MsaG020240	MtrunA17_Chr3g0136961	33.613	119	68	2	249	360	81	195	1.04e-13	72.0
MsaG020240	MtrunA17_Chr4g0042831	41.975	81	39	2	292	365	260	339	1.30e-13	72.8
MsaG020240	MtrunA17_Chr1g0150801	46.575	73	33	2	295	361	87	159	1.40e-13	68.9
MsaG020240	MtrunA17_Chr7g0243891	44.444	81	37	2	292	365	356	435	2.51e-13	72.4
MsaG020240	MtrunA17_Chr5g0443131	38.961	77	41	1	297	367	144	220	4.27e-13	70.1
MsaG020240	MtrunA17_Chr7g0263531	40.000	80	42	2	290	363	341	420	1.84e-12	69.3
MsaG020240	MtrunA17_Chr8g0386241	31.633	98	61	1	275	366	68	165	2.59e-12	65.5
MsaG020240	MtrunA17_Chr7g0224801	43.478	69	33	1	300	362	83	151	2.71e-12	65.1
MsaG020240	MtrunA17_Chr1g0194481	40.260	77	40	2	297	367	145	221	3.09e-12	67.8
MsaG020240	MtrunA17_Chr3g0129321	44.595	74	35	1	297	364	105	178	5.46e-12	65.1
MsaG020240	MtrunA17_Chr8g0335811	42.308	78	39	1	289	360	133	210	1.82e-11	63.9
MsaG020240	MtrunA17_Chr4g0068541	37.179	78	43	1	296	367	194	271	1.95e-11	66.2
MsaG020240	MtrunA17_Chr8g0383251	39.474	76	40	1	297	366	95	170	3.44e-11	62.4
MsaG020240	MtrunA17_Chr7g0248721	41.772	79	39	2	289	361	120	197	4.34e-11	62.8
MsaG020240	MtrunA17_Chr5g0418781	41.558	77	39	2	290	360	104	180	5.65e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG020240	AT4G04450.1	37.602	492	232	14	52	486	30	503	1.10e-74	246
MsaG020240	AT4G04450.2	39.578	427	194	12	106	486	1	409	1.26e-69	230
MsaG020240	AT4G22070.4	42.541	362	172	9	89	428	76	423	1.66e-62	214
MsaG020240	AT4G22070.3	42.541	362	172	9	89	428	76	423	1.66e-62	214
MsaG020240	AT4G22070.2	42.541	362	172	9	89	428	76	423	1.66e-62	214
MsaG020240	AT4G22070.1	42.541	362	172	9	89	428	76	423	1.66e-62	214
MsaG020240	AT1G62300.1	35.729	501	211	18	52	489	89	541	5.37e-60	207
MsaG020240	AT4G01720.1	45.000	220	90	6	295	483	224	443	1.75e-34	136
MsaG020240	AT1G68150.1	38.265	196	94	5	206	384	131	316	1.05e-29	120
MsaG020240	AT1G69810.2	41.799	189	92	6	258	438	97	275	2.60e-28	115
MsaG020240	AT1G69810.1	43.976	166	79	5	281	438	174	333	4.25e-28	116
MsaG020240	AT1G18860.1	46.753	154	67	4	293	432	222	374	2.43e-26	112
MsaG020240	AT5G15130.2	52.174	92	37	1	293	377	168	259	5.27e-26	111
MsaG020240	AT5G15130.1	52.174	92	37	1	293	377	210	301	5.77e-26	112
MsaG020240	AT1G80840.1	40.230	87	40	3	290	364	121	207	8.82e-16	78.6
MsaG020240	AT2G25000.3	39.326	89	47	1	285	366	100	188	1.43e-15	77.0
MsaG020240	AT2G25000.2	39.326	89	47	1	285	366	78	166	1.67e-15	76.3
MsaG020240	AT2G25000.4	39.326	89	47	1	285	366	78	166	1.67e-15	76.3
MsaG020240	AT2G25000.1	39.326	89	47	1	285	366	121	209	2.69e-15	76.6
MsaG020240	AT1G29860.1	39.785	93	46	2	295	381	121	209	3.51e-15	76.6
MsaG020240	AT5G26170.1	46.479	71	32	2	296	360	99	169	1.08e-14	72.8
MsaG020240	AT2G03340.1	43.023	86	43	2	286	365	391	476	1.19e-14	77.0
MsaG020240	AT4G31800.2	40.000	80	41	1	309	381	110	189	2.94e-14	73.2
MsaG020240	AT2G38470.1	45.000	80	38	2	292	365	344	423	2.97e-14	75.9
MsaG020240	AT1G64000.1	46.053	76	35	2	292	361	96	171	3.07e-14	72.0
MsaG020240	AT4G18170.1	46.575	73	33	1	297	363	159	231	3.38e-14	73.9
MsaG020240	AT4G31800.1	40.000	80	41	1	309	381	175	254	4.71e-14	73.6
MsaG020240	AT1G13960.1	44.872	78	37	2	292	363	391	468	4.98e-14	75.1
MsaG020240	AT5G41570.1	38.776	98	50	3	297	388	85	178	5.70e-14	70.9
MsaG020240	AT3G01080.2	40.698	86	43	2	285	363	319	403	7.25e-14	74.3
MsaG020240	AT1G13960.2	44.872	78	37	2	292	363	238	315	8.08e-14	73.6
MsaG020240	AT3G01080.1	40.698	86	43	2	285	363	281	365	8.83e-14	73.9
MsaG020240	AT5G56270.1	43.038	79	39	1	293	365	470	548	1.25e-13	73.9
MsaG020240	AT5G46350.1	43.836	73	35	1	297	363	170	242	3.54e-13	71.2
MsaG020240	AT5G49520.1	39.241	79	42	1	295	367	206	284	6.21e-13	70.9
MsaG020240	AT2G04880.2	37.778	90	50	2	280	363	253	342	6.23e-13	71.2
MsaG020240	AT2G04880.1	37.778	90	50	2	280	363	277	366	7.10e-13	71.2
MsaG020240	AT4G26640.5	41.772	79	40	2	293	365	188	266	7.46e-13	70.9
MsaG020240	AT4G26640.6	41.772	79	40	2	293	365	188	266	7.46e-13	70.9
MsaG020240	AT4G26640.4	41.772	79	40	2	293	365	188	266	7.46e-13	70.9
MsaG020240	AT4G26640.3	41.772	79	40	2	293	365	188	266	7.46e-13	70.9
MsaG020240	AT4G26640.1	41.772	79	40	2	293	365	292	370	1.03e-12	70.9
MsaG020240	AT4G26640.2	41.772	79	40	2	293	365	364	442	1.04e-12	70.9
MsaG020240	AT4G26640.7	41.772	79	40	2	293	365	324	402	1.05e-12	70.9
MsaG020240	AT5G07100.2	42.500	80	40	2	290	363	121	200	1.16e-12	67.8
MsaG020240	AT5G07100.4	42.500	80	40	2	290	363	121	200	1.16e-12	67.8
MsaG020240	AT5G07100.5	42.500	80	40	2	290	363	121	200	1.16e-12	67.8
MsaG020240	AT5G07100.3	42.500	80	40	2	290	363	121	200	1.16e-12	67.8
MsaG020240	AT2G30250.1	38.298	94	51	3	280	367	299	391	1.37e-12	70.1
MsaG020240	AT5G07100.1	40.476	84	44	2	290	367	214	297	1.42e-12	68.9
MsaG020240	AT3G62340.1	46.575	73	33	2	297	363	105	177	1.59e-12	68.6
MsaG020240	AT4G30935.1	35.036	137	76	4	267	393	288	421	3.52e-12	68.9
MsaG020240	AT5G13080.1	41.667	72	36	1	297	362	54	125	3.83e-12	64.7
MsaG020240	AT5G64810.1	42.391	92	44	2	278	360	75	166	6.09e-12	65.1
MsaG020240	AT1G55600.1	41.333	75	38	1	297	365	294	368	6.57e-12	68.2
MsaG020240	AT3G01970.1	43.662	71	34	1	296	360	51	121	9.19e-12	63.5
MsaG020240	AT4G26440.1	34.127	126	69	3	297	414	359	478	1.99e-11	67.0
MsaG020240	AT2G47260.1	39.024	82	44	2	295	370	159	240	2.66e-11	65.5
MsaG020240	AT2G46130.1	41.026	78	40	2	290	361	10	87	3.19e-11	60.8
MsaG020240	AT2G44745.1	39.744	78	41	1	289	360	124	201	4.03e-11	63.2

Find 112 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATAGAGTTTGATTTCTTTA+AGG	0.143956	4:-47732714	MsaT020240.1:CDS
GATAAAACTGCAGGAAAATT+TGG	0.153966	4:+47709094	None:intergenic
GAAGTTTATGATGGAAAATT+TGG	0.188184	4:-47710769	MsaT020240.1:CDS
GTTCTCTTGTCTTCTGAATT+AGG	0.194946	4:+47732365	None:intergenic
TTGACTGCCCGAGCAATATT+TGG	0.235969	4:+47709136	None:intergenic
AACTCAAGGTTAATATTAAC+TGG	0.250989	4:+47732851	None:intergenic
GCTACTGATAATAATAATAA+TGG	0.268864	4:-47709019	MsaT020240.1:CDS
TGTGGAGTTTGAAACTGATC+TGG	0.292210	4:+47709205	None:intergenic
CAGAAGACAAGAGAACTAAA+AGG	0.319856	4:-47732358	MsaT020240.1:CDS
AATAAGGTTATGGAAGTTAA+AGG	0.322766	4:-47710796	MsaT020240.1:CDS
ACTGGTGCCAAGGAAAATTA+TGG	0.327217	4:-47710836	MsaT020240.1:CDS
TCCCTTTCCTAGTCAATATT+AGG	0.336762	4:-47732784	MsaT020240.1:CDS
TCAAGTGTAATGGTTGGAAA+TGG	0.343703	4:+47709262	None:intergenic
CTTGTTTCATTAGATGAGAT+TGG	0.354120	4:+47732737	None:intergenic
AACTGATCTGGGTTCCTTTG+TGG	0.354361	4:+47709217	None:intergenic
CGTATTATCGTTGCAGCATA+TGG	0.358122	4:-47710194	MsaT020240.1:CDS
TTGTGTCCCTTCAAAACTAT+TGG	0.363975	4:-47709164	MsaT020240.1:CDS
AAAAGGAAATTTGTTGATGC+TGG	0.369100	4:-47710709	MsaT020240.1:CDS
CTACTAGTATTGGTAGTAAC+AGG	0.370957	4:+47732419	None:intergenic
GATGCAAGATTGTAAGGTTA+AGG	0.371759	4:-47710926	MsaT020240.1:CDS
GCCATTTCTTTGGCTGCTGC+AGG	0.373631	4:+47709421	None:intergenic
TGCTCAGCTCCGTGCCGAAT+TGG	0.376877	4:-47724753	MsaT020240.1:CDS
TCTTGGATCAGCTACTAATA+AGG	0.377634	4:-47710812	MsaT020240.1:CDS
TAGTGATACATCATCTTTGT+TGG	0.382295	4:-47732630	MsaT020240.1:CDS
TGCTGGGTTGGCTACTAATA+AGG	0.384058	4:-47710692	MsaT020240.1:intron
CTGCAACGATAATACGCTTT+AGG	0.384404	4:+47710201	None:intergenic
TTCTTTCATAGCAGCCAATT+CGG	0.392189	4:+47724739	None:intergenic
CCAAGGAAAATTATGGATCT+TGG	0.393916	4:-47710829	MsaT020240.1:CDS
TCTTTGGCTGCTGCAGGTAA+AGG	0.394516	4:+47709427	None:intergenic
TAACATCCTCATTCTTACTT+AGG	0.406214	4:+47710455	None:intergenic
GGATGTCAATGGAGAAAGTA+TGG	0.409848	4:-47710252	MsaT020240.1:CDS
CAAGTGTAATGGTTGGAAAT+GGG	0.411437	4:+47709263	None:intergenic
CTTTGGCTGCTGCAGGTAAA+GGG	0.420375	4:+47709428	None:intergenic
ATCAGCTACTAATAAGGTTA+TGG	0.421535	4:-47710806	MsaT020240.1:CDS
TAGATGAGATTGGAGAGGTT+TGG	0.425712	4:+47732747	None:intergenic
GCTACTCTTACTTCCATGAT+TGG	0.436300	4:-47709070	MsaT020240.1:CDS
CTATGAATATGATCCTTGTC+GGG	0.440174	4:+47732650	None:intergenic
CTACTGATAATAATAATAAT+GGG	0.441864	4:-47709018	MsaT020240.1:CDS
GGGTTCCTTTGTGGAGTAGT+TGG	0.444283	4:+47709226	None:intergenic
GTCTGCTATGATGGCTTCAC+AGG	0.451165	4:-47724690	MsaT020240.1:CDS
CGATAATACGCTTTAGGACA+TGG	0.452989	4:+47710207	None:intergenic
GAAAGTGATGCAAGATTGTA+AGG	0.455429	4:-47710932	MsaT020240.1:CDS
GTAGCAGCAGTAGTGTTGTT+TGG	0.455433	4:+47709037	None:intergenic
ACCTGCAGCAGCCAAAGAAA+TGG	0.461509	4:-47709422	MsaT020240.1:CDS
ACAGGTAGCAACAACAAAGA+TGG	0.479242	4:-47708959	MsaT020240.1:CDS
GACCTAATATTGACTAGGAA+AGG	0.479292	4:+47732782	None:intergenic
AAAGGACAAGAAGTTTATGA+TGG	0.480807	4:-47710778	MsaT020240.1:CDS
ACTATGAATATGATCCTTGT+CGG	0.485934	4:+47732649	None:intergenic
TGGTTGCTCAGTCCGAAAAC+AGG	0.487721	4:-47710167	MsaT020240.1:intron
AATGGGAACAATGTCGCAAA+AGG	0.491408	4:-47709001	MsaT020240.1:CDS
ACATCAACATCAAGCAATGA+TGG	0.491559	4:-47709361	MsaT020240.1:CDS
GGCAGTTCCAAATATTGCTC+GGG	0.494464	4:-47709143	MsaT020240.1:CDS
TGACGCTATGTCTGCTATGA+TGG	0.497092	4:-47724699	MsaT020240.1:CDS
GTGGAGTTTGAAACTGATCT+GGG	0.502421	4:+47709206	None:intergenic
AGCTGAGAATGGTGGAGTAC+TGG	0.504825	4:-47710854	MsaT020240.1:CDS
AAGTGAATCGGAGCAGTGGC+TGG	0.506910	4:+47724662	None:intergenic
CTCTGCCTCTGTCCCCGACA+AGG	0.510437	4:-47732663	MsaT020240.1:CDS
AGAAGACAAGAGAACTAAAA+GGG	0.511884	4:-47732357	MsaT020240.1:CDS
TGGCAGTTCCAAATATTGCT+CGG	0.513777	4:-47709144	MsaT020240.1:CDS
GGGAATCACCTCAAGTGAAT+CGG	0.516333	4:+47724650	None:intergenic
TAGTAGTGATCAATCTATGA+TGG	0.520634	4:-47732402	MsaT020240.1:CDS
TGGCTGAGTATCACCAATCA+TGG	0.521571	4:+47709057	None:intergenic
ATTAACTGGATTTGAATCCA+TGG	0.524287	4:+47732865	None:intergenic
TGGGACTAAGTTTCAACTCA+AGG	0.529586	4:+47732837	None:intergenic
ATGGTGGAGAATTAGTGAAA+AGG	0.530673	4:-47710726	MsaT020240.1:CDS
GGCTGCTATGAAAGAAGACT+TGG	0.532512	4:-47724732	MsaT020240.1:CDS
GAAATTTGTTGATGCTGGGT+TGG	0.532637	4:-47710704	MsaT020240.1:CDS
ACCTAATATTGACTAGGAAA+GGG	0.537487	4:+47732783	None:intergenic
GTTGTCATCACAACATATGA+AGG	0.537947	4:-47709463	MsaT020240.1:CDS
AGTATTGGTAGTAACAGGAT+TGG	0.539477	4:+47732424	None:intergenic
AAGCTTCGAGGAGGCTTCGA+AGG	0.539694	4:-47710485	MsaT020240.1:CDS
AGGCAGAGACAACTTCTTGA+TGG	0.540615	4:+47732678	None:intergenic
AGATTACAATTACATGCGAA+TGG	0.540869	4:-47710962	MsaT020240.1:CDS
TTGAGTATAATCAAGTGTAA+TGG	0.545850	4:+47709252	None:intergenic
AAAGGAAATTTGTTGATGCT+GGG	0.547546	4:-47710708	MsaT020240.1:CDS
AGATTGATCACTACTAGTAT+TGG	0.549551	4:+47732409	None:intergenic
TGTAAGGTTAAGGAAGTCAA+AGG	0.554949	4:-47710916	MsaT020240.1:CDS
GTTAGTCCTAAGTAAGAATG+AGG	0.558419	4:-47710461	MsaT020240.1:CDS
GTATTGGTAGTAACAGGATT+GGG	0.564404	4:+47732425	None:intergenic
TTATTGTGTTAGATCACTGA+TGG	0.564668	4:-47710273	MsaT020240.1:intron
ATGATCCTTGTCGGGGACAG+AGG	0.567680	4:+47732658	None:intergenic
AGAGTAGCTGATAAAACTGC+AGG	0.568439	4:+47709085	None:intergenic
AAAATTTGGATTAGCAGCAA+TGG	0.568779	4:+47709108	None:intergenic
ACTTAGTCCCAACGAAAACA+TGG	0.569432	4:-47732825	MsaT020240.1:CDS
GTCGCAAAAGGTAATAACAA+TGG	0.570392	4:-47708989	MsaT020240.1:CDS
GTATAATCAAGTGTAATGGT+TGG	0.576480	4:+47709256	None:intergenic
AATAACAATGGAAATATCAC+AGG	0.579865	4:-47708977	MsaT020240.1:CDS
CAGGTAGCAACAACAAAGAT+GGG	0.581390	4:-47708958	MsaT020240.1:CDS
CCACTGCTCCGATTCACTTG+AGG	0.587957	4:-47724658	MsaT020240.1:intron
CAATACTTGAAGAACAAGGA+AGG	0.589537	4:+47709305	None:intergenic
AAGTGTAATGGTTGGAAATG+GGG	0.590397	4:+47709264	None:intergenic
ATCAGCGTTGAAAAGCTTCG+AGG	0.603132	4:-47710497	MsaT020240.1:CDS
CCTCAAGTGAATCGGAGCAG+TGG	0.603162	4:+47724658	None:intergenic
AATACTTGAAGAACAAGGAA+GGG	0.605302	4:+47709306	None:intergenic
TAGCAACAACAAAGATGGGA+AGG	0.605972	4:-47708954	MsaT020240.1:CDS
GATAATACGCTTTAGGACAT+GGG	0.608155	4:+47710208	None:intergenic
ATGGTGGAGTACTGGTGCCA+AGG	0.608936	4:-47710846	MsaT020240.1:CDS
TATGAAAGAAGACTTGGCTA+AGG	0.617639	4:-47724726	MsaT020240.1:CDS
TTCATTAGATGAGATTGGAG+AGG	0.619862	4:+47732742	None:intergenic
TGGAGGACCTAATATTGACT+AGG	0.620153	4:+47732777	None:intergenic
AGATCACTGATGGATGTCAA+TGG	0.621939	4:-47710263	MsaT020240.1:CDS
TCATAGCAGCCAATTCGGCA+CGG	0.623518	4:+47724744	None:intergenic
ATACTTGAAGAACAAGGAAG+GGG	0.623529	4:+47709307	None:intergenic
TGGCTGCTGCAGGTAAAGGG+TGG	0.624702	4:+47709431	None:intergenic
TCGTTGCAGCATATGGCCCG+TGG	0.632461	4:-47710187	MsaT020240.1:CDS
TGTTAATGTTGAAAATGTTG+AGG	0.658284	4:-47710437	MsaT020240.1:CDS
ATCAGTTTCAAACTCCACAA+AGG	0.672681	4:-47709201	MsaT020240.1:CDS
AATCTCCAACTACTCCACAA+AGG	0.678231	4:-47709231	MsaT020240.1:CDS
TATGAATATGATCCTTGTCG+GGG	0.678269	4:+47732651	None:intergenic
AGCGTTGAAAAGCTTCGAGG+AGG	0.678382	4:-47710494	MsaT020240.1:CDS
AGACAAGAGAACTAAAAGGG+AGG	0.688005	4:-47732354	MsaT020240.1:intron
GTTGCAATACTTGAAGAACA+AGG	0.694121	4:+47709301	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	47708949	47732885	47708949	ID=MsaG020240
Chr4	mRNA	47708949	47732885	47708949	ID=MsaT020240.1;Parent=MsaG020240
Chr4	exon	47708949	47709489	47708949	ID=MsaT020240.1.exon7;Parent=MsaT020240.1
Chr4	CDS	47708949	47709489	47708949	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47710168	47710283	47710168	ID=MsaT020240.1.exon6;Parent=MsaT020240.1
Chr4	CDS	47710168	47710283	47710168	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47710384	47710524	47710384	ID=MsaT020240.1.exon5;Parent=MsaT020240.1
Chr4	CDS	47710384	47710524	47710384	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47710693	47710987	47710693	ID=MsaT020240.1.exon4;Parent=MsaT020240.1
Chr4	CDS	47710693	47710987	47710693	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47724659	47724777	47724659	ID=MsaT020240.1.exon3;Parent=MsaT020240.1
Chr4	CDS	47724659	47724777	47724659	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47732355	47732453	47732355	ID=MsaT020240.1.exon2;Parent=MsaT020240.1
Chr4	CDS	47732355	47732453	47732355	ID=cds.MsaT020240.1;Parent=MsaT020240.1
Chr4	exon	47732616	47732885	47732616	ID=MsaT020240.1.exon1;Parent=MsaT020240.1
Chr4	CDS	47732616	47732885	47732616	ID=cds.MsaT020240.1;Parent=MsaT020240.1

Gene Sequence

>MsaT020240.1

ATGGATTCAAATCCAGTTAATATTAACCTTGAGTTGAAACTTAGTCCCAACGAAAACATGGATGCTACACATAGTACTATCCCTTTCCTAGTCAATATTAGGTCCTCCAATGAAAACCAAACCTCTCCAATCTCATCTAATGAAACAAGAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCAAGAAGTTGTCTCTGCCTCTGTCCCCGACAAGGATCATATTCATAGTGATACATCATCTTTGTTGGAACTCAAGCTGAGTCTTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTATGATGGATGACGACACGTCACCTAATTCAGAAGACAAGAGAACTAAAAGGGAGAATGCTCAGCTCCGTGCCGAATTGGCTGCTATGAAAGAAGACTTGGCTAAGGCTCATGACGCTATGTCTGCTATGATGGCTTCACAGGAACAACCAGCCACTGCTCCGATTCACTTGAGAACAGATTACAATTACATGCGAATGGATTTCGAGAAAGTGATGCAAGATTGTAAGGTTAAGGAAGTCAAAGGAAAAGAAGTTTTTGATGGAAAAATTAAAGAGAAAAAAATAGCTGAGAATGGTGGAGTACTGGTGCCAAGGAAAATTATGGATCTTGGATCAGCTACTAATAAGGTTATGGAAGTTAAAGGACAAGAAGTTTATGATGGAAAATTTGGTGAGAAAAAGAGAATGAAGAATGGTGGAGAATTAGTGAAAAGGAAATTTGTTGATGCTGGGTTGGCTACTAATAAGTTAGGATCAGCGTTGAAAAGCTTCGAGGAGGCTTCGAAGGAGTTAGTCCTAAGTAAGAATGAGGATGTTAATGTTGAAAATGTTGAGGCTACATTGACAAAAGCAAGAGTTACTATTAGAGCTAGATCAGAAGAAACCATTATCACTGATGGATGTCAATGGAGAAAGTATGGACAGAAACTGTCGAAAAGAAACCCATGTCCTAAAGCGTATTATCGTTGCAGCATATGGCCCGTGGTTGCTCAGTCCGAAAACAGAGCAGTTGTCATCACAACATATGAAGGAAATCACAACCACCCTTTACCTGCAGCAGCCAAAGAAATGGCAAAAACAACTTCTGCAGCTGCAAAGATGCTTCTTTCAACATCAACATCAAGCAATGATGGACAATTGAATGCAAATTTACTCAGAAGAACACCCCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAACTTCTGCCCCATTTCCAACCATTACACTTGATTATACTCAATCTCCAACTACTCCACAAAGGAACCCAGATCAGTTTCAAACTCCACAAAGGAACCAATCAAAATTTTGTGTCCCTTCAAAACTATTGGCAGTTCCAAATATTGCTCGGGCAGTCAACGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAGTTTTATCAGCTACTCTTACTTCCATGATTGGTGATACTCAGCCAAACAACACTACTGCTGCTACTGATAATAATAATAATGGGAACAATGTCGCAAAAGGTAATAACAATGGAAATATCACAGGTAGCAACAACAAAGATGGGAAGGAATAA

Protein sequence

>MsaT020240.1

MDSNPVNINLELKLSPNENMDATHSTIPFLVNIRSSNENQTSPISSNETRIEFDFFKDNNNDHQEVVSASVPDKDHIHSDTSSLLELKLSLGPNPVTTNTSSDQSMMDDDTSPNSEDKRTKRENAQLRAELAAMKEDLAKAHDAMSAMMASQEQPATAPIHLRTDYNYMRMDFEKVMQDCKVKEVKGKEVFDGKIKEKKIAENGGVLVPRKIMDLGSATNKVMEVKGQEVYDGKFGEKKRMKNGGELVKRKFVDAGLATNKLGSALKSFEEASKELVLSKNEDVNVENVEATLTKARVTIRARSEETIITDGCQWRKYGQKLSKRNPCPKAYYRCSIWPVVAQSENRAVVITTYEGNHNHPLPAAAKEMAKTTSAAAKMLLSTSTSSNDGQLNANLLRRTPLPCSSSIATISTSAPFPTITLDYTQSPTTPQRNPDQFQTPQRNQSKFCVPSKLLAVPNIARAVNAAIAANPNFPAVLSATLTSMIGDTQPNNTTAATDNNNNGNNVAKGNNNGNITGSNNKDGKE*